Metagenome / Metatranscriptome Family F060224

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060224
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	40 residues
Representative Sequence	MNSKAEKLLVVESDDALREQIVAVLNDAGYEVSTDYREGIK
Number of Associated Samples	108
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.92 %
% of genes near scaffold ends (potentially truncated)	96.24 %
% of genes from short scaffolds (< 2000 bps)	86.47 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.165 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.316 % of family members)
Environment Ontology (ENVO)	Unclassified (35.338 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.880 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.29% β-sheet: 8.70% Coil/Unstructured: 71.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00581	Rhodanese	5.26
PF00072	Response_reg	4.51
PF13581	HATPase_c_2	3.76
PF13620	CarboxypepD_reg	2.26
PF07080	DUF1348	2.26
PF08240	ADH_N	2.26
PF07676	PD40	1.50
PF17131	LolA_like	1.50
PF00881	Nitroreductase	1.50
PF02554	CstA	1.50
PF13365	Trypsin_2	1.50
PF13185	GAF_2	1.50
PF00296	Bac_luciferase	0.75
PF02321	OEP	0.75
PF12681	Glyoxalase_2	0.75
PF01872	RibD_C	0.75
PF02746	MR_MLE_N	0.75
PF07813	LTXXQ	0.75
PF12844	HTH_19	0.75
PF00857	Isochorismatase	0.75
PF01047	MarR	0.75
PF04402	SIMPL	0.75
PF04545	Sigma70_r4	0.75
PF04397	LytTR	0.75
PF03965	Penicillinase_R	0.75
PF01833	TIG	0.75
PF12367	PFO_beta_C	0.75
PF07992	Pyr_redox_2	0.75
PF03284	PHZA_PHZB	0.75
PF03050	DDE_Tnp_IS66	0.75
PF07681	DoxX	0.75
PF04338	DUF481	0.75
PF13847	Methyltransf_31	0.75
PF04199	Cyclase	0.75
PF00582	Usp	0.75
PF00730	HhH-GPD	0.75
PF00106	adh_short	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.01
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	2.26
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.50
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.50
COG1966	Carbon starvation protein CstA (peptide/pyruvate transporter)	Energy production and conversion [C]	1.50
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.75
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.75
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.75
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	0.75
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.75
COG3137	Putative salt-induced outer membrane protein YdiY	Cell wall/membrane/envelope biogenesis [M]	0.75
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	0.75
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.75
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.75
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.75
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.75
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.75
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.75
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.75
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.75
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.75
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.75
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.75
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.17 %
Unclassified	root	N/A	33.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.17 %
Unclassified	root	N/A	33.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.17 %
Unclassified	root	N/A	33.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.50 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.02 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.75 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.75 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.27 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.75 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.75 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.75 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.75 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.75 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.75 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.75 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.75 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.75 %
Staphylococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae	0.75 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.75 %
Staphylococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus	0.75 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.75 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.75 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.75 %
Staphylococcus carnosus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus carnosus	0.75 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.75 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.75 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573002\|GZIGXIF02H6N2X	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10124151	Not Available	629	Open in IMG/M
3300001160\|JGI12654J13325_1009557	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300001175\|JGI12649J13570_1015244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300002914\|JGI25617J43924_10310438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus carnosus	544	Open in IMG/M
3300005436\|Ga0070713_102079090	Not Available	551	Open in IMG/M
3300005536\|Ga0070697_101881418	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300005537\|Ga0070730_10752804	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005538\|Ga0070731_10828978	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005542\|Ga0070732_10074164	All Organisms → cellular organisms → Bacteria → Acidobacteria	1986	Open in IMG/M
3300005587\|Ga0066654_10829818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300005602\|Ga0070762_10380426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300005610\|Ga0070763_10562021	Not Available	658	Open in IMG/M
3300005764\|Ga0066903_102012682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1110	Open in IMG/M
3300005764\|Ga0066903_103389916	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005921\|Ga0070766_10038271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2650	Open in IMG/M
3300006046\|Ga0066652_102019982	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006175\|Ga0070712_100223592	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300006800\|Ga0066660_10758770	Not Available	791	Open in IMG/M
3300006893\|Ga0073928_11177386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300006904\|Ga0075424_102819799	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006914\|Ga0075436_100025714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4051	Open in IMG/M
3300009088\|Ga0099830_10001248	All Organisms → cellular organisms → Bacteria	12686	Open in IMG/M
3300009089\|Ga0099828_11995443	Not Available	508	Open in IMG/M
3300010304\|Ga0134088_10590425	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300010359\|Ga0126376_12494222	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300010376\|Ga0126381_102538644	Not Available	734	Open in IMG/M
3300010376\|Ga0126381_103720675	Not Available	597	Open in IMG/M
3300010376\|Ga0126381_105124807	Not Available	502	Open in IMG/M
3300011269\|Ga0137392_10472537	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300011269\|Ga0137392_10702458	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300011271\|Ga0137393_10763925	Not Available	827	Open in IMG/M
3300012189\|Ga0137388_10875867	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300012205\|Ga0137362_10363207	Not Available	1254	Open in IMG/M
3300012205\|Ga0137362_10849341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300012207\|Ga0137381_10613581	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300012211\|Ga0137377_11654899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300012362\|Ga0137361_11815783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012683\|Ga0137398_10009017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4943	Open in IMG/M
3300012918\|Ga0137396_10013739	All Organisms → cellular organisms → Bacteria → Acidobacteria	5042	Open in IMG/M
3300012922\|Ga0137394_11403046	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300012923\|Ga0137359_10070252	All Organisms → cellular organisms → Bacteria	3062	Open in IMG/M
3300012924\|Ga0137413_10360639	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300012927\|Ga0137416_11085517	Not Available	718	Open in IMG/M
3300012929\|Ga0137404_10118905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2157	Open in IMG/M
3300012929\|Ga0137404_10169060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1832	Open in IMG/M
3300012930\|Ga0137407_10596329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300012930\|Ga0137407_10889945	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300012944\|Ga0137410_10503158	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300012971\|Ga0126369_12731174	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300012977\|Ga0134087_10057694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1545	Open in IMG/M
3300014150\|Ga0134081_10034290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1480	Open in IMG/M
3300014200\|Ga0181526_10898893	Not Available	557	Open in IMG/M
3300014200\|Ga0181526_11087272	Not Available	502	Open in IMG/M
3300015054\|Ga0137420_1247413	All Organisms → cellular organisms → Bacteria → Acidobacteria	1836	Open in IMG/M
3300017654\|Ga0134069_1062033	Not Available	1186	Open in IMG/M
3300017942\|Ga0187808_10314159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300017975\|Ga0187782_10649893	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300020579\|Ga0210407_10303364	All Organisms → cellular organisms → Bacteria → Acidobacteria	1247	Open in IMG/M
3300020579\|Ga0210407_10328619	Not Available	1195	Open in IMG/M
3300020579\|Ga0210407_10828650	Not Available	712	Open in IMG/M
3300020582\|Ga0210395_10553925	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300020582\|Ga0210395_10896617	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300020582\|Ga0210395_11361149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300020583\|Ga0210401_11021878	Not Available	685	Open in IMG/M
3300021088\|Ga0210404_10872617	Not Available	514	Open in IMG/M
3300021171\|Ga0210405_10092934	All Organisms → cellular organisms → Bacteria → Acidobacteria	2379	Open in IMG/M
3300021171\|Ga0210405_10381476	All Organisms → cellular organisms → Bacteria → Acidobacteria	1111	Open in IMG/M
3300021406\|Ga0210386_10233731	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1565	Open in IMG/M
3300021407\|Ga0210383_10339256	Not Available	1294	Open in IMG/M
3300021407\|Ga0210383_11681125	Not Available	520	Open in IMG/M
3300021420\|Ga0210394_10847754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300021432\|Ga0210384_10199451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1799	Open in IMG/M
3300021433\|Ga0210391_11352006	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300021477\|Ga0210398_11555760	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300021478\|Ga0210402_11899203	Not Available	521	Open in IMG/M
3300021479\|Ga0210410_10199234	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300021479\|Ga0210410_10212819	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300021559\|Ga0210409_10573090	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300021559\|Ga0210409_10976883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	721	Open in IMG/M
3300021560\|Ga0126371_13583258	Not Available	524	Open in IMG/M
3300022532\|Ga0242655_10096126	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300022722\|Ga0242657_1025292	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300022724\|Ga0242665_10320705	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	547	Open in IMG/M
3300024330\|Ga0137417_1350740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300024347\|Ga0179591_1087844	All Organisms → cellular organisms → Bacteria	3154	Open in IMG/M
3300025885\|Ga0207653_10428897	Not Available	519	Open in IMG/M
3300025928\|Ga0207700_11440589	Not Available	612	Open in IMG/M
3300026326\|Ga0209801_1026938	All Organisms → cellular organisms → Bacteria	2754	Open in IMG/M
3300026330\|Ga0209473_1016698	All Organisms → cellular organisms → Bacteria → Proteobacteria	3488	Open in IMG/M
3300026330\|Ga0209473_1024935	All Organisms → cellular organisms → Bacteria	2756	Open in IMG/M
3300026377\|Ga0257171_1089581	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300026446\|Ga0257178_1028020	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300026536\|Ga0209058_1237497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300026555\|Ga0179593_1197115	All Organisms → cellular organisms → Bacteria → Acidobacteria	1863	Open in IMG/M
3300026557\|Ga0179587_10614972	Not Available	715	Open in IMG/M
3300027071\|Ga0209214_1033251	Not Available	683	Open in IMG/M
3300027610\|Ga0209528_1136067	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300027727\|Ga0209328_10116702	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300027889\|Ga0209380_10593168	Not Available	642	Open in IMG/M
3300027895\|Ga0209624_10285441	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300028047\|Ga0209526_10571500	Not Available	728	Open in IMG/M
3300028536\|Ga0137415_10055803	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3818	Open in IMG/M
3300028536\|Ga0137415_11284247	Not Available	549	Open in IMG/M
3300029636\|Ga0222749_10011506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3571	Open in IMG/M
3300029636\|Ga0222749_10046601	Not Available	1902	Open in IMG/M
3300029999\|Ga0311339_10123138	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3125	Open in IMG/M
3300030399\|Ga0311353_11109377	Not Available	657	Open in IMG/M
3300030580\|Ga0311355_11090952	Not Available	711	Open in IMG/M
3300030862\|Ga0265753_1064909	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300030878\|Ga0265770_1070853	Not Available	665	Open in IMG/M
3300031057\|Ga0170834_112412994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1512	Open in IMG/M
3300031681\|Ga0318572_10212288	Not Available	1132	Open in IMG/M
3300031715\|Ga0307476_10222079	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300031718\|Ga0307474_11034452	Not Available	650	Open in IMG/M
3300031720\|Ga0307469_11342288	Not Available	680	Open in IMG/M
3300031720\|Ga0307469_11521040	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300031720\|Ga0307469_11608849	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300031754\|Ga0307475_10073329	Not Available	2621	Open in IMG/M
3300031754\|Ga0307475_11170696	Not Available	599	Open in IMG/M
3300031781\|Ga0318547_10697043	Not Available	631	Open in IMG/M
3300031792\|Ga0318529_10106472	Not Available	1269	Open in IMG/M
3300031820\|Ga0307473_10089531	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300031821\|Ga0318567_10838457	Not Available	521	Open in IMG/M
3300031823\|Ga0307478_10086071	All Organisms → cellular organisms → Bacteria	2408	Open in IMG/M
3300031879\|Ga0306919_10395001	Not Available	1060	Open in IMG/M
3300031962\|Ga0307479_10330357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507	Open in IMG/M
3300031962\|Ga0307479_10921550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	845	Open in IMG/M
3300031962\|Ga0307479_11607899	Not Available	605	Open in IMG/M
3300032059\|Ga0318533_10415622	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300032059\|Ga0318533_10751793	Not Available	715	Open in IMG/M
3300032180\|Ga0307471_102737814	Not Available	626	Open in IMG/M
3300032829\|Ga0335070_10100020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3037	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.50%
Host-Associated	Host-Associated	1.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.49%
Aquatic	Environmental → Aquatic	3.01%
Plants	Host-Associated → Plants	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.23%
Freshwater	Environmental → Aquatic → Freshwater	2.26%
Peat	Environmental → Terrestrial → Peat	2.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.20%
Loam	Environmental → Terrestrial → Soil → Loam	13.53%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.50%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.01%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.26%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.75%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001160	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE1_03205040	2189573002	Grass Soil	MNDKAGKVLVVESDDSLREHIVAVLSDAGYEVSTDYLQGMQ
AF_2010_repII_A1DRAFT_101241511	3300000597	Forest Soil	MEKSGSEKLLVVESDVVLRRSIVTVLSNAGYEVSTEY
JGI12654J13325_10095571	3300001160	Forest Soil	MNSKAEKFLAVESDDALRERIVTVLRDAGYEVSTDYRE
JGI12649J13570_10152441	3300001175	Forest Soil	MNSKAEKLLVVESEDALREYVVAVLSDAGYEISTDYREGMKAVLAFG
JGI25617J43924_103104381	3300002914	Grasslands Soil	MDSKAEKLFVVESDSALREHVAAVLKDAGYDVSTAYQEGMKAVLAF
Ga0070713_1020790902	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDVMNSKAKLLVVESDDVLRERIVAVLRDAGYTVSTDYQQG
Ga0070697_1018814182	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDVMESKTEKLLVVESDDVLRERIVAVLTDAGYQVSTDYEEGIKSVL
Ga0070730_107528041	3300005537	Surface Soil	MDSKAEKLFVIEGDGTLREHITAVLNDAGYEVSTAYQDGIKAILAASPDVV
Ga0070731_108289782	3300005538	Surface Soil	MEHSGSEKLLVVESDDALKRSIIDVLSSAGYEVSTNY
Ga0070732_100741644	3300005542	Surface Soil	MNHKAEKVLVVEPDNGLREHIVTALSEAGYKVSTDYLEGM
Ga0066654_108298181	3300005587	Soil	VESDDALRDQIVAVLSGAGYEVSTDYREGMKAVLA
Ga0070762_103804261	3300005602	Soil	MNPKAGKLLVVESDDARREQILAVLRDAGYIVSSDNQH
Ga0070763_105620211	3300005610	Soil	MNGKAERLLVVESDDALRERIVTVLSDAGYEVSTDC
Ga0066903_1020126823	3300005764	Tropical Forest Soil	MTQKAEKLLVVESDAVLRRSIVAALSAAGYEVSSDY
Ga0066903_1033899162	3300005764	Tropical Forest Soil	MSKTGRVLVVECDEALRDRIITTLTDAGYEVSTNCSDGMKT
Ga0070766_100382711	3300005921	Soil	VLVVESDDALRTSIVGAFSDARYDVSTDYREGMKAVP
Ga0066652_1020199823	3300006046	Soil	MKSKAERLLVVESGDALREHIVAVLSDAGYEVSTDYGEGM
Ga0070712_1002235922	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MESKTEKLLVVESDDALRDRIVAVLSDAGYEVSTDYREGI
Ga0066660_107587702	3300006800	Soil	MEKSSSERVLVVESDDALRSSIVGALSDAGYEVSIDYR
Ga0073928_111773861	3300006893	Iron-Sulfur Acid Spring	MNDKAGKVLVVESDDSLRDHIVSVLSDAGYEVSTDY
Ga0075424_1028197992	3300006904	Populus Rhizosphere	MNAQTEKVLLVESDDALRQRIAGLLSEAGYQVSTDY
Ga0075436_1000257141	3300006914	Populus Rhizosphere	MNSKTAKLLVVESDVALRDQIVSTLTDAGYEVSTNT
Ga0099830_100012481	3300009088	Vadose Zone Soil	MDHKAEKVLIVEPEDSLREHIVAALSEAGYQVSTDYREGMKA
Ga0099828_119954431	3300009089	Vadose Zone Soil	MGVMKSKAEKLLVVESDDALREHIVAVLSDAGYEVSTDYGE
Ga0134088_105904251	3300010304	Grasslands Soil	MESKTEKLLVVESDDVLRERVAAVLADAGYQVSTDYE
Ga0126376_124942221	3300010359	Tropical Forest Soil	MEKSNIERLLVVEPDDRLRTSIVAVLSDAGYQVSTDYREGMRSVLAFN
Ga0126381_1025386442	3300010376	Tropical Forest Soil	MNNKTDKLLVVESGEDLRERIVAALNDAGYQVSTDAH
Ga0126381_1037206752	3300010376	Tropical Forest Soil	MQPDKVLVVESDNAVRKELVAVLSDAGYDVSTDYRAQSVT
Ga0126381_1051248071	3300010376	Tropical Forest Soil	MNSRAEKLLVVESDDGLRDQVAALLRDAGYDVSTDHRE
Ga0137392_104725371	3300011269	Vadose Zone Soil	MAHKAEKVLIVEPEDSLREHIVAALSEAGYQVSTDYREGMKAV
Ga0137392_107024581	3300011269	Vadose Zone Soil	MNSKAEKLLVVESDDALRERIVAVLNDAGYEVSTDYGEGMKA
Ga0137393_107639252	3300011271	Vadose Zone Soil	MDGLMNQNAGKVLVVESDESLRQRIAAALNDAGYEVSTDSQGGMKAVLA
Ga0137388_108758674	3300012189	Vadose Zone Soil	MKSKAEKLLVVESDDALRKQIVAVLSDAGYEVSTDY
Ga0137362_103632071	3300012205	Vadose Zone Soil	MNSKAAKLLVVESDDVLREQIVAVLREAGYAVSADYP
Ga0137362_108493411	3300012205	Vadose Zone Soil	MNSKAEKLLVVESDDALRERIVAVLNDAGYEVSTDY
Ga0137381_106135812	3300012207	Vadose Zone Soil	MSDKTAKLLVVESDDALRDQIVAVLSGAGYEVSTDYREGM
Ga0137377_116548991	3300012211	Vadose Zone Soil	MESKTEKLLVVESDDALRDRIVAVLSDAGYEVSTDYREGMK
Ga0137361_118157832	3300012362	Vadose Zone Soil	MKSKAERLLVVESGDALREHIVAVLSDAGYEVSTD
Ga0137398_100090175	3300012683	Vadose Zone Soil	MNDKAGKVLVVESDDSLRQHIVAVLTDAGYEVSTDS
Ga0137396_100137392	3300012918	Vadose Zone Soil	MNDKAGKVLVVQSDDSLRQHIVAVLTDAGYEVTTDFREPRS*
Ga0137394_114030462	3300012922	Vadose Zone Soil	MNSKAGKLLVVESDDSLRDNIVAVLSDAGFEVSTDYREGMQAVLAF
Ga0137359_100702525	3300012923	Vadose Zone Soil	MNSKTGKILVVESDDALREQIVSALTDAGYEVSTNY
Ga0137413_103606391	3300012924	Vadose Zone Soil	MNSKAGKLLVVESDERLREQIVAVLTGAGFEVTTDYQ
Ga0137416_110855172	3300012927	Vadose Zone Soil	MSDKTAKLLVVESDDVLRGQIVAVLSGAGYEVSTDYREGM
Ga0137404_101189052	3300012929	Vadose Zone Soil	MEYKTEKLMVVDSDDALRDRIVAVLSDAGYEVSTDYREGM
Ga0137404_101690604	3300012929	Vadose Zone Soil	MDNKAGKLLVVESDDSVREHVVTVLSDAGFEVSTDYRG
Ga0137407_105963291	3300012930	Vadose Zone Soil	MKSKAERLLVVESEDSLREQIVAVLSDAGYEVSADY
Ga0137407_108899452	3300012930	Vadose Zone Soil	MGVMESKTEKLLVVESDDVLRKPIFAVLSVAGYQLSTDYAEEIK
Ga0137410_105031581	3300012944	Vadose Zone Soil	MNDKAAKVLVAESEDSLRQRIVAVLSDAGYEVSTDCGGGMKAVVAFNPDTV
Ga0126369_127311741	3300012971	Tropical Forest Soil	MNSRAEKLLVVESDDTLRGRIASVLRDAGYEVSTDFQPGIKAVLD
Ga0134087_100576941	3300012977	Grasslands Soil	MSDKTAKLLVVESDDALRDQIVAVLSGAGYEVSTDYREGMKA
Ga0134081_100342902	3300014150	Grasslands Soil	MSDKTAKLLVVESDDALRGQIVAVLSGAGYEVSTDYREGMKA
Ga0181526_108988931	3300014200	Bog	MKSKAEKLLVVESDETLREGLAVVLRDAGYEVSTDYGQGMQSILAFAPDL
Ga0181526_110872721	3300014200	Bog	MNSRVGKLLVVESDNSLRDSVVTALSDAGFEVSTDYRDGMKA
Ga0137420_12474134	3300015054	Vadose Zone Soil	MNGLMNQNAEKVLVVESNESLRQQIVAALSDAGYEVSTDSQGGMK
Ga0134069_10620331	3300017654	Grasslands Soil	MSDKTAKLLVVESDDVLRGQIVAVLSGAGYEVSTDYREGMKA
Ga0187808_103141592	3300017942	Freshwater Sediment	MNARAGKLLVVESDDALREQIAAVLRDAGYVVSSDYQQGMK
Ga0187782_106498931	3300017975	Tropical Peatland	MNSETQKLLVVESDDALREQIVSVLRDSGYEVSTEYREGMKA
Ga0210407_103033642	3300020579	Soil	MGNKAEKVLIVEPEDSLREHIVAALSEAGYQVSSDYREGMKAV
Ga0210407_103286192	3300020579	Soil	MNDKAGKVLVVESDDSLREHIVAVLSEAGYEASADCRGGMKAVVAFNP
Ga0210407_108286504	3300020579	Soil	MKAGKVLVVESDSALREHLVAVLSDAGYEASTDYREGMKAIAVF
Ga0210395_105539252	3300020582	Soil	MSDMNDKAGKVLVAESDDSLREQIVAVLSDVGYEVSTDCRGGMKAVV
Ga0210395_108966172	3300020582	Soil	MNSKAEKLLVVESDDALREQIVAVLNDAGYEVSTDYREGIK
Ga0210395_113611491	3300020582	Soil	MNSKAGKLLLVESDDALREQIAAVLRDAGYTVSGDYQQGMKAVIAFDPD
Ga0210401_110218781	3300020583	Soil	MKSRAEKVLVVEPDDAISENVVRVLSDAGYEVSTLL
Ga0210404_108726171	3300021088	Soil	MESKTEKLLVVESDDALRDRIVAVLSDAGYEVSTD
Ga0210405_100929344	3300021171	Soil	MRSQAEKLLVVESDDHLRDHIVAVLSNAGYEVSTDYEQGIK
Ga0210405_103814763	3300021171	Soil	MNHKAGKLLVVESDDALRDHIVAVLSDAGYEVSTDYREGMKAVL
Ga0210386_102337311	3300021406	Soil	MNSKAGKLLVVESDDALREQIAAVLRDAGYTVSDNHRQGMKAVIAF
Ga0210383_103392561	3300021407	Soil	MNDKAGKVLVVESDDSLREHIVAVLSDAGYEVSNDWRGG
Ga0210383_116811251	3300021407	Soil	MGYETGKLLVVESDEALREHIVAVLSDAGYEVSTDYR
Ga0210394_108477542	3300021420	Soil	MNSKPGKLLVVESDDTLREQIVALLSDAWYEVSSDYREGMKGVLAFDP
Ga0210384_101994513	3300021432	Soil	MGYTTGRLLVVEADEALRGHIAAVLRDAGYEVSAD
Ga0210391_113520061	3300021433	Soil	MNDKPGKVLVVESDDSLREHIVTVLSDGGYEVSTDCQAGLKAV
Ga0210398_115557601	3300021477	Soil	MPSQAEKLLVVEPDDHLRDHIVAVLSDAGYEVSTDYEKGI
Ga0210402_118992031	3300021478	Soil	MKSKAEKLLVVESDETPREHIAAVLHDAGYEVSTDYREG
Ga0210410_101992344	3300021479	Soil	MDKSSSERVLVVESDDALRSSIVGALSDAGYEVST
Ga0210410_102128191	3300021479	Soil	MEKSSSERVLVVESDDALRSSIVGALSDAGYEVST
Ga0210409_105730902	3300021559	Soil	MNHKAEKVLVVEPDNGLREHIVTALSEAGYKVSTDYLEGMNSVLSFDPD
Ga0210409_109768831	3300021559	Soil	MNSKPEKLLVVESDDALREHVVAVLSDAGYELSTDYREGMKA
Ga0126371_135832581	3300021560	Tropical Forest Soil	MSSKASKLLVVESDDALSGQISAVLREAGYEVSAD
Ga0242655_100961261	3300022532	Soil	NDKAGKVLVVESDDRLREHIVAVLTDAGYEVSTDSGEE
Ga0242657_10252922	3300022722	Soil	NNKAGKVLVAESDDSLREHIVTVLSDAGYEVSPTAREE
Ga0242665_103207052	3300022724	Soil	MNASAGKLLVVETDEALRTQIVAILNEAGYEVSTD
Ga0137417_13507402	3300024330	Vadose Zone Soil	ASIMNDKAGKVLVVQSDDSLRQHIVAVLTDAGYEVTTDFREPRS
Ga0179591_10878449	3300024347	Vadose Zone Soil	TEKLLVVESDDVLRDRIATVLSEAGYQVSTDTRKE
Ga0207653_104288972	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MNQNAGKVLVVESDESLRQQIAAALNDAGYEVSTD
Ga0207700_114405891	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MNSKAAKLLVVESDDVLRERIVAVLRDAGYTVSTDYQQG
Ga0209801_10269381	3300026326	Soil	MSDKTAKLLVVESDDVLRGQIVAVLSGAGYEVSTDYREGMKAV
Ga0209473_10166985	3300026330	Soil	VESDDALRDQIVAVLSGAGYEVSTDYREGMKAVLAFNPD
Ga0209473_10249353	3300026330	Soil	MSDKTAKLLVVESDDVLRGQIVAVLSGAGYEVSTDYREGMKAVL
Ga0257171_10895811	3300026377	Soil	MESKTGKLLVVESDDTLRERVVAVLSDAGYQVSTDYEEGMKS
Ga0257178_10280201	3300026446	Soil	MDHKAEKVLIVEPEDSLREHIVAALSEAGYQVSTDYREGM
Ga0209058_12374971	3300026536	Soil	MSDKTAKLLVVESDDALREQIVAVLRGAGYEVSTDYREGM
Ga0179593_11971153	3300026555	Vadose Zone Soil	MESNSEKLMVVESDDALRDRIVAVLSDAGYEVSTDYRKG
Ga0179587_106149721	3300026557	Vadose Zone Soil	MDNKAGKLLVVESDDSVREHVVTVLSDAGFEVSTDYCGGMKAVLA
Ga0209214_10332512	3300027071	Forest Soil	MDKSSSERVLVVESDDALRSSIVGALSDAGYEVSTDYR
Ga0209528_11360671	3300027610	Forest Soil	MESKAEKLLVVESDDALRERIVAVLSDAGYQVSTDYSEGMKSVLAFGP
Ga0209328_101167022	3300027727	Forest Soil	MNHKAGKLLVVESDDALRDHIVAVLSDAGYEVSTDYREGMKA
Ga0209380_105931682	3300027889	Soil	MNHKAGKLLVVESHDALRDHIVAVLSDAGYEVSTDYREG
Ga0209624_102854413	3300027895	Forest Soil	MNSKPEKLLVVESDDALKEHVVVVLSGAGYELSTDYREG
Ga0209526_105715001	3300028047	Forest Soil	MNDKAGKVLVAESDDSLREHIVAALIDAGYEVSTDSQTGIKA
Ga0137415_100558033	3300028536	Vadose Zone Soil	MNDKAGKVLVVQSDDSLRQHIVAVLTDAGYEVTTDFREPRS
Ga0137415_112842471	3300028536	Vadose Zone Soil	MSVMKSKAEKLLVVESGDALRENIVAVLSDAGYEVS
Ga0222749_100115061	3300029636	Soil	MDKSSSERVLVVESDDALRSSIVGALSDAGYEVSTDYREGMKF
Ga0222749_100466012	3300029636	Soil	MVVESDDALRNHIVEVLSDAGYEVSTDYREGMKAVLAFD
Ga0311339_101231381	3300029999	Palsa	MNDKPGKVLVVESDEGLREHIVTVLRDAGYEVSTDCQAGMKTVV
Ga0311353_111093771	3300030399	Palsa	MNDKPGKVLVVESDEGLREHIVTVLRDAGYEVSTDCQ
Ga0311355_110909522	3300030580	Palsa	MNDKPGKILVVESDEGLREHIVTVLRDAGYEVSTDCQ
Ga0265753_10649092	3300030862	Soil	MRSQAEKLLVVESDDRLRDHIVAVLSDAGYEVSTD
Ga0265770_10708533	3300030878	Soil	MNDKAGKVLVAESDDSLREHIVAALIDAGYEVSTD
Ga0170834_1124129943	3300031057	Forest Soil	MNDKAGKVLVAESDDSLREHIVAVLSDAGYEVTTDYRGGMKAVVAFN
Ga0318572_102122881	3300031681	Soil	MNSKTEKLLVVESDAALREGIAAVLRDAGYEVSTDCEGGMT
Ga0307476_102220794	3300031715	Hardwood Forest Soil	MEHSSSERVLVVESDDALRSSIVGALSDAGYEVSTDYREGM
Ga0307474_110344522	3300031718	Hardwood Forest Soil	MDKSSSERVLVVESDDALRSSIVGALGDAGYEVSTDYR
Ga0307469_113422881	3300031720	Hardwood Forest Soil	MESKAKKLMVVESDDALRDRIVAVLSDAGYDVSTDYREG
Ga0307469_115210402	3300031720	Hardwood Forest Soil	MESKTEKLLVVESDDTLRERVVAVLSDAGYQVSTDYEEGMK
Ga0307469_116088492	3300031720	Hardwood Forest Soil	MNSKTAKLLVVESDVALRDKIVSTLTDAGYEVSTDYREGMKSVL
Ga0307475_100733293	3300031754	Hardwood Forest Soil	MNSKASKLLVVESDDVLREQIVDVLRDAGYAVSTDYQQGAHQRRTA
Ga0307475_111706961	3300031754	Hardwood Forest Soil	MEKSSSERVLVVESDDALRSSIAGALSDAGYEVSTDYGEGMKFVL
Ga0318547_106970431	3300031781	Soil	MNSKTEKLLVVESDAAFREGIAAVLRDAGYEVSTDCEGGM
Ga0318529_101064721	3300031792	Soil	MNSKTEKLLVVESDAALREGIAAVLRDAGYEVSTDCEGGMR
Ga0307473_100895313	3300031820	Hardwood Forest Soil	MNDKTGKLLVVESDDALREQIVAVLSGAGYEVSTDYG
Ga0318567_108384571	3300031821	Soil	MNSKAEKLLVVESDDALRESIAAVLREAGYEVSTDRE
Ga0307478_100860711	3300031823	Hardwood Forest Soil	MTAMEPKAQKLMVVEPDDALRNHIVAVLRDAGYEVSTDYREGMQAVLAF
Ga0306919_103950012	3300031879	Soil	MNSKTEKLLVVESDAALREGIAAVLRDAGYEVSTDCEGGM
Ga0307479_103303574	3300031962	Hardwood Forest Soil	MRSKAERLLVVESDDRLRDQIVVVLSDAGYEVSTDYE
Ga0307479_109215502	3300031962	Hardwood Forest Soil	MNSKAEKLLVVESDDAFRQQIVGVLSDAGYEVSTDYRDGIKAIL
Ga0307479_116078991	3300031962	Hardwood Forest Soil	MKAGKVLVVESDSALREHLVAVLSDAGYEASTDYREGM
Ga0318533_104156222	3300032059	Soil	VKPNGEKLLVVESDDALTRSIVTALSDAGYEISTRYRG
Ga0318533_107517932	3300032059	Soil	MNSKTEKLLVVESDAALREGIAAVLRDAGYEVSTDCEGGMTGVL
Ga0307471_1027378142	3300032180	Hardwood Forest Soil	MNQNAEKVLVVESDENLRQQIVAALSDTGYEVSTDSQGGMKAVLAFGPDT
Ga0335070_101000201	3300032829	Soil	MTKNREKVLVVESDNVVSESIVSALSDAGYEVSTET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060224

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences