NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F060115

Metagenome / Metatranscriptome Family F060115

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F060115
Family Type Metagenome / Metatranscriptome
Number of Sequences 133
Average Sequence Length 84 residues
Representative Sequence MPSVLATSTLVDHLDVHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQAFSGL
Number of Associated Samples 117
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 89.47 %
% of genes near scaffold ends (potentially truncated) 15.79 %
% of genes from short scaffolds (< 2000 bps) 87.97 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (75.188 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil
(15.038 % of family members)
Environment Ontology (ENVO) Unclassified
(20.301 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.857 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102
1Ga0063356_1004455162
2Ga0065704_100188622
3Ga0065705_100433202
4Ga0065707_101443122
5Ga0066388_1021219411
6Ga0070708_1008088751
7Ga0066687_109424112
8Ga0070686_1007796671
9Ga0066692_102026712
10Ga0058697_103956011
11Ga0070664_1011853182
12Ga0068859_1004152232
13Ga0068859_1019966902
14Ga0066905_1016873291
15Ga0068866_105558812
16Ga0066903_1023553812
17Ga0081455_100198004
18Ga0081538_100040042
19Ga0081540_10335954
20Ga0081539_100269654
21Ga0075417_100035865
22Ga0075427_100935981
23Ga0066665_115819722
24Ga0075428_1006660742
25Ga0075428_1013041761
26Ga0075429_1003217762
27Ga0075419_100431373
28Ga0099791_103185151
29Ga0099829_100309553
30Ga0099830_101361543
31Ga0099828_118841111
32Ga0099827_100679433
33Ga0099827_101209591
34Ga0111539_100980971
35Ga0111539_104984981
36Ga0066709_1000229264
37Ga0111538_101761823
38Ga0075423_107597852
39Ga0126380_103947271
40Ga0126380_106449192
41Ga0126384_104690922
42Ga0126384_121125581
43Ga0126382_107398321
44Ga0126382_111514282
45Ga0127427_1205481
46Ga0127437_1601972
47Ga0127485_10418012
48Ga0127501_11257962
49Ga0127453_10942082
50Ga0127500_11354271
51Ga0127446_10095072
52Ga0127497_11469032
53Ga0127466_10212062
54Ga0127488_11376382
55Ga0127498_11474751
56Ga0127499_11408391
57Ga0127483_12244262
58Ga0126321_13414702
59Ga0126376_102372672
60Ga0126376_110141901
61Ga0126372_104369271
62Ga0126372_107775952
63Ga0126377_107124361
64Ga0126377_114343661
65Ga0126383_110325881
66Ga0126383_123739252
67Ga0137391_115492191
68Ga0137421_11760912
69Ga0137389_103718902
70Ga0137352_11082702
71Ga0137388_108602251
72Ga0137365_102276372
73Ga0137380_104998611
74Ga0137381_112737831
75Ga0150985_1167682401
76Ga0150985_1173896201
77Ga0134028_12704002
78Ga0137387_108638571
79Ga0134034_10179801
80Ga0134029_12133122
81Ga0134057_13015211
82Ga0134056_12939442
83Ga0134051_13097761
84Ga0134059_10122581
85Ga0157305_102550412
86Ga0137419_111583861
87Ga0126369_123959701
88Ga0132258_107494671
89Ga0132258_115900791
90Ga0132258_117913432
91Ga0132256_1002910952
92Ga0132257_1029343542
93Ga0132255_1002080703
94Ga0190268_107879911
95Ga0180110_12921081
96Ga0180107_11195041
97Ga0242665_101472131
98Ga0207662_102558832
99Ga0207712_105147531
100Ga0209076_11795481
101Ga0209799_10592451
102Ga0209388_11334861
103Ga0209180_100929071
104Ga0209814_100037942
105Ga0207428_101839711
106Ga0207428_104445711
107Ga0209382_100898783
108Ga0137415_102630682
109Ga0307504_100618801
110Ga0247646_10142522
111Ga0247640_12122512
112Ga0247636_102884522
113Ga0308205_10615842
114Ga0308202_10419941
115Ga0308198_10840881
116Ga0308154_1148401
117Ga0308196_10709761
118Ga0308189_105090461
119Ga0308195_10795821
120Ga0308151_10504511
121Ga0308182_10232472
122Ga0310904_107319291
123Ga0307409_1020852052
124Ga0370545_036722_107_361
125Ga0370545_069381_316_570
126Ga0314783_172616_150_404
127Ga0314788_201574_142_396
128Ga0314792_022014_92_346
129Ga0314793_010101_1052_1306
130Ga0314798_146885_116_370
131Ga0314799_021541_64_351
132Ga0314800_022692_78_365
133Ga0314803_010473_873_1127
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080MPSVLATSTLVDHLDVHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQAFSGLSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
24.8%75.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Switchgrass Rhizosphere
Soil
Grasslands Soil
Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Avena Fatua Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Tabebuia Heterophylla Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
Agave
10.5%13.5%11.3%15.0%3.0%6.8%3.0%3.8%10.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0063356_10044551623300004463Arabidopsis Thaliana RhizosphereMPSVLATSTLIDHVDVHDLPTEPPRACRAQKGLWRTLTQPVAWFRVWRASRRQHLCAVSHRFETPAELFARQYPSSYLQGFSGL*
Ga0065704_1001886223300005289Switchgrass RhizosphereMPSVLATSIPVDHIDLHDLPTEPPRAGRAQKGFWRTLAQYVAWLRVRRTHRMQHLCAVSHRFETPAELFARQYPSSYIQG
Ga0065705_1004332023300005294Switchgrass RhizosphereMPSVLATSIPVDHIDLHDLLTEPPRAGRAQKGFWRTLAQYVAWLRVRRTHRMQHLCAVSHRFETPAELFARQYPSSYIQGFSGL*
Ga0065707_1014431223300005295Switchgrass RhizosphereMPSVLATSIPVDHIDLHDLLTEPPRAGRAQKGFWRTLAQYVAWLRVRRTHRMQHLCAASHRFETPAELFARQYPSSYIQGFSGL*
Ga0066388_10212194113300005332Tropical Forest SoilSVLATSTLADHIALRDLPTELPRARTAPMGLWRPLAQYVAWLRDRRARRLQHLCAVSYRYETPAELFARHYPTSYLQAYSGL*
Ga0070708_10080887513300005445Corn, Switchgrass And Miscanthus RhizosphereMPSVLAISTLVDHLNIHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPSSYLQALSGL*
Ga0066687_1094241123300005454SoilMLSVLATSTLVDHTNIHNLPIELPRARRAQQGFWRPLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPASYLQAFSGL*
Ga0070686_10077966713300005544Switchgrass RhizosphereMPSVLTPSTLHDHIDGHDFPTMTPRTRGARQGFWRTLAQYVPWSRVQKTDRRQHLCAVSQRCETPAELFARQYPASYLLGYAGC*
Ga0066692_1020267123300005555SoilMPSVLATSTLVDYTNIHDLPIELPRARRAQQGFWRPLAQYMAWLRVRRTRRLQHLCVVSHGFETPAELFARQYPASYLQAFSGL*
Ga0058697_1039560113300005562AgaveMPSVLATSTYVDHIDVHALPTESPRARRAPQGFWRTLAQYVAWLRVRRTRHMQHLCAVSYRFETPAELFARQYPSSYFRGFSGF*
Ga0070664_10118531823300005564Corn RhizosphereMPSVLATSTLADHIDVHHLPTELSRAYRAQKGFWRILAQCVAWLHARRIDRRQHLCAVSHQFETPVELFARQYPASYLLGFSSL*
Ga0068859_10041522323300005617Switchgrass RhizosphereMPSVLATSTLADHIDVHHLPTTEPSRAYRAQKGFWRILAQCVAWLHARRIDRRQHLCAVSHQFETPVELFARQYPASYLLGFSSL*
Ga0068859_10199669023300005617Switchgrass RhizosphereMPSVLTPSTLHDHIDGHDFPTMTPRTRGARQGFWRTLAQYVPWSRVQKTDRRQHLCAVSQRCETPAELFARQ
Ga0066905_10168732913300005713Tropical Forest SoilMPSVLTTSIPVDHIDLHDLPTEPPRADRAQKGFWRTLAQYVAWLRVRRAHRMQHLCAVSHRFETPAELFARQYPSSYIQGFSGL*
Ga0068866_1055588123300005718Miscanthus RhizosphereMPSVLATSTLADHIDVHHLPTEPSRAYRAQKGFWRILAQCVAWLHARRIDRRQHLCAVSHQFETPVELFARQYPASYLLGFSSL*
Ga0066903_10235538123300005764Tropical Forest SoilMPLVLATTTLVDHIAVHDLPTEAPRAGRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHRFETPVELFARQYPSSYFRGFSGF*
Ga0081455_1001980043300005937Tabebuia Heterophylla RhizosphereMPSVLATSTLVDHIDIHDLPIEPPRARRAPKGFWRTLAQYVAWLRLLRTHRMQHLCAASHGFETPAELFARQYPSSYLQAFSGL*
Ga0081538_1000400423300005981Tabebuia Heterophylla RhizosphereMPSVLATSIPIDHIDLHDLPTEPLHARRAQQGFWRTLAQYVACLRVWRTHHRQHLCAVSHRFETPAELFARQYPSSYLQAFLGL*
Ga0081540_103359543300005983Tabebuia Heterophylla RhizosphereMPSVLATSTLVDHIDTHDLPIEPPRAHRAQQGFWRTLAQYVAWLRVRRTHRMQHLCAASHRFETPAELFARQYPSSYIQGFSGL*
Ga0081539_1002696543300005985Tabebuia Heterophylla RhizosphereMPSVLATSTLVDHIAVHDLPTEPPRARRAQQGFWRTLAQYVAWLRFRRTRRMQHLCAVSHRFETPAELFARQYPASYLQAYSGL*
Ga0075417_1000358653300006049Populus RhizosphereMPSVLATSTPVDHRDVFDLPTEPPRARRALQGFWRTLAQYVAWLSVQRTSHMQHLCAVSYRFETPAELFARQYPSSYFRGFSSF*
Ga0075427_1009359813300006194Populus RhizosphereMPSVLATSIPVDHIDLHDLTIEPPRAGRAQKGFWRTLTQYVAWLRVRRTHRLQHLCAVSYRFETPAELFARQYPASYLQAFSGL*
Ga0066665_1158197223300006796SoilMPSVLATSTLVDHLDVHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0075428_10066607423300006844Populus RhizosphereMPSVLATSTFVDHIDVHDLPTEPPRTRRAQQGFWRTLAQYVTWLRVRKTRRMQHLCAVSHRFETPAELFARQYPSSYLLGFSGF*
Ga0075428_10130417613300006844Populus RhizosphereMPSVLATSTLVDHRDVFDLPTEPPRARRAPQGFWRTLSQYVALLRVRRTRHMQHLCAVSYRFETPAELFARQYPSSYFRGFSGF*
Ga0075429_10032177623300006880Populus RhizosphereMPLVLATSTLVDHIDVHDLPTEPPRAGRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHRFETPAELFARQYPSSYLQAYSIL*
Ga0075419_1004313733300006969Populus RhizosphereMPSVLATSTPVDHRDVFDLPTEPPRARRALQGFWRTLAQYVAWLRVRRTSHMQQLCAVSYRFETPAELFARQYPSSYFRGFSGF*
Ga0099791_1031851513300007255Vadose Zone SoilMPSVLATSTLVDHIDIHDFPIELPRARRAQKGFWRTLTQFIAWLRVRRARRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL*
Ga0099829_1003095533300009038Vadose Zone SoilMPSALATSTLVDHIDVYDLPTEPSCSRGAQKGFWRILAQYVAWFRVRRAHRMQHLCVVSHRFETPAELFARQYPASYLQAYVGL*
Ga0099830_1013615433300009088Vadose Zone SoilMPSALATSTLVDHIDVYDLPTEPSCSRGAQKGFWRILAQYVAWLRVRRAHRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL*
Ga0099828_1188411113300009089Vadose Zone SoilHIDVYDLPTEPSCSRGAQKGFWRILAQYVAWFRVRRAHRMQHLCVVSHRFETPAELFARQYPASYLQAYVGL*
Ga0099827_1006794333300009090Vadose Zone SoilPSALATSTLVDHIDVYDLPTEPSCSRGAQKGFWRILAQYVAWFRVQRAHRMQYLCVVSHRFETPAELFARQYPASYLQAYLGL*
Ga0099827_1012095913300009090Vadose Zone SoilMPSALATSTLVDHIDVYDLPTEPSCSRGAQKGFWRILAQYVAWFRVRRAHRMQHLCVVSHRFETPAELFARQYPASYLQAYSGL*
Ga0111539_1009809713300009094Populus RhizosphereMPSVLATSISVDHIDLHDLTIEPPRAGRAQKGFWRTLTQYVAWLRVRRTHRLQHLCAVSYRFETPAELFARQYPASYLQAFSGL*
Ga0111539_1049849813300009094Populus RhizosphereTLVDHRDVVDLPTEPHRARRALHGFWRTLAQYVAWLRVRRTSHMQQLCAVSYRFETPAELFARQYPSSYFRGFSGF*
Ga0066709_10002292643300009137Grasslands SoilMPSVLATSTLVDHLNIHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0111538_1017618233300009156Populus RhizosphereMGTHPGTRSIAMPSVLATSTFVDHIDVHDLPTEPPRTRRAQQGFWRTLAQYVTWLRVRKTRRMQHLCAVSHRFETPAELFARQYPSSYLLGFSGF*
Ga0075423_1075978523300009162Populus RhizosphereMPSVLATSTPVDHRDVFDLPTEPPRARRALQGFWRTLAQYVAWLRVRRTSHMQHLCAVSYRFETPAELFARQYPSSYFRSFSSF*
Ga0126380_1039472713300010043Tropical Forest SoilHIDIHDLPIEPPRARRAPKGFWRTLAQYVAWLRLLRIHRMQHLCAASHGFETPAELFARQYPSSYLQAFSGL*
Ga0126380_1064491923300010043Tropical Forest SoilMPSVLATSIPVDHIDLHDLPTEPPRARRAQKGFWRTLAQYVAWLRVRRTYRMQHLCAVSHRFETPAELFARQYPTSYIQGFSGL*
Ga0126384_1046909223300010046Tropical Forest SoilMPSVLATSTLVDHIDIHDLPIEPPRAGRAQQGFWRTLAQYVAWLRVRRTHRMQHLCAVSHRFETPAELFARQYPSSYLQAYSIL*
Ga0126384_1211255813300010046Tropical Forest SoilMPSVLATSIPVDHIDLHDLPTEPPRARRAQKGFWRTLAQYVAWFRVRRTYRMQYLCAASHRFETPAELFARQYPSSYIQGFSGL*
Ga0126382_1073983213300010047Tropical Forest SoilMPSILATSTLVDHIDIHDLPIEPPRARRALKGFWRTLAQYVAWLRLLRTHRMQHLCAASHGFETPAELFARQYPSSYLQAFSGL*
Ga0126382_1115142823300010047Tropical Forest SoilFMGTHPGTRSIAMPSVLATSIPVDHIDLHDLPTEPPRARIAQKGFWRTLAQYVAWLRVRRTYRMQHLCAVSHRFETPAELFARQYPSSYIQGFSGL*
Ga0127427_12054813300010066Grasslands SoilMPSVLATSTLVDHTNIHNLPIELPRARRAQQGFWRPLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPASYLQAFSGL*
Ga0127437_16019723300010077Grasslands SoilMPSVLATSTLVDHTNIHNLPIELPRARRAQQGFWRPLSQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPASYLQAFSGL*
Ga0127485_104180123300010091Grasslands SoilMPSVLATSTLVDHRNIHNLPTEPPRAYRAQQGFGRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0127501_112579623300010097Grasslands SoilMPSVLATSTLVDHLNIHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVLHGFETPAELFARQYPSSYLQAFSGL*
Ga0127453_109420823300010102Grasslands SoilMPSVLATSTLVDHLNIHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHRFETPAELFARQYPSSYLQAFSGL*
Ga0127500_113542713300010103Grasslands SoilMPSVLATSTLVDYTNLHDLPIELPRARRAQQGFWRPLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPASYLQAFSGL*
Ga0127446_100950723300010104Grasslands SoilMPSVLATSTLVDHLNIHDFPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0127497_114690323300010109Grasslands SoilMPSVLTTSPLVDHIDIHDFPIEPPRARRAQRGFWRILAQYVAWLHVRRTRRMQHLCAVSHRFETPAELFARQYPSSYLQAFSGL*
Ga0127466_102120623300010116Grasslands SoilMPSVLATSTLVDHTNTHNLPIELPRARRAQQGFWRPLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPASYLQAFSGL*
Ga0127488_113763823300010122Grasslands SoilMPSVLATSTLVDHLNIHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0127498_114747513300010124Grasslands SoilMPSVLTTSPLVDHIDIHDFPIEPPRARRAQRGFWRILAQYVAWLHVRRTRRMQHLCAVSHRFETPAELFARQYPSSYLQAFSSLW*
Ga0127499_114083913300010141Grasslands SoilMPSVLATSTLVDHTNLHDLPIELPRARRAQQGFWRPLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPASYLQAFSGL*
Ga0127483_122442623300010142Grasslands SoilMPSVLATSTLVDHRNIHNLPTEPPRAYRAQQGFGRTLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0126321_134147023300010145SoilMPSVLATSTYVDHVDVRALPTEPPRTRRARQRFWRTLAQHVAWLRVPRTRRMQHLCAVSHRFETPAELFARQYPSSYLLGFSSFS*
Ga0126376_1023726723300010359Tropical Forest SoilMPLVLATSTLVDHIDAHDLPTEPPRAGRAQQGFWRTLAQYVAWLRVRRTHRMQHLCAVSHRFETPAELFARQ
Ga0126376_1101419013300010359Tropical Forest SoilTRSIAMPLVLATSTLVDHIAVHDLPTEPPCARRAQQGFWRALAQFVVWLRVRRTRRLQHLCAVSHRFETPAELFARQYPASYLQAFSGL*
Ga0126372_1043692713300010360Tropical Forest SoilMPSVLATSIPVDHIDLHDLLTEPPRAGRAQKGFWRTLAQYVAWFRVRRTYRMQYLCAASHRFETPAELFARQYPSSYIQGFSGL*
Ga0126372_1077759523300010360Tropical Forest SoilMPSILATSPLVDHIDVHDLPTEPPRAGRAQKGFWRTLAQYVAWLRVRRTCRMQQLCAVSHQFETPAELFARQYPSSYLQACSIL*
Ga0126377_1071243613300010362Tropical Forest SoilMPSVLATSIPVDHIDLHDLPTEPPRARRAQKGFWRTLAQYVAWLRVRRIHHVQHLCAASYRFETPAELFARQYPSSYLQAF
Ga0126377_1143436613300010362Tropical Forest SoilMPSVLATSVPVDHIDLHDLSTEPPRADRAQKGFWRTLAQYVAWLRVRRTYRMQHLCAVSHRFETPAELFARQYPSSYIQGFSGL*
Ga0126383_1103258813300010398Tropical Forest SoilMPSVLATSTFVDHIDVHDLPTEPPRTRTAQQGFWCTLAQYVAWLRVRRTRRMQHLCAVSHRFETPAELFARQYPSSYLQAYSI
Ga0126383_1237392523300010398Tropical Forest SoilMPLVLATSTLVDHIDAHDLPTEPPRAGRAQQGFWRTLAQYVAWLRVRRTHRMQHLCAVSHRFETPAELFARQYPSSYLQAYSIL*
Ga0137391_1154921913300011270Vadose Zone SoilMPSALATSTLVDHIDVYDLPTEPSCSRGAQKGFWRTLTQFVAWLRVRRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL*
Ga0137421_117609123300012039SoilMPSALTSSTLLDHIDGHDFPTLPPRTRGARQGFWRTLAQYVPWSRVQKTDRRQHLGAVSQRFETPAELVARQYPASYLLGFAGS*
Ga0137389_1037189023300012096Vadose Zone SoilMGTHPATRSIAMPSALATSTLVDHIDVYDLPTEPSCSRGAQKGFWRILAQYVAWFRVRRAHRMQHLCVVSHRFETPAELFARQYPASYLQAYVGL*
Ga0137352_110827023300012164SoilMPSVLTPSTLLDHIDGHDFSTMPPRTREARQGFWRTLAQYVPWSRIQKTDRRQHLCAVSQQFETPAELFAR
Ga0137388_1086022513300012189Vadose Zone SoilMPSVLATSTLVDHIDVHDFPTELLRARRAQKGFWRTLTQFVAWLRVRRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL*
Ga0137365_1022763723300012201Vadose Zone SoilLVDHLNLHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0137380_1049986113300012206Vadose Zone SoilMPSVLATSTLVDHRNIHNLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRLHHRCAVSHRFETPAELFARQYPSSYLQAFSGL*
Ga0137381_1127378313300012207Vadose Zone SoilMPSVLATSTLVDHIDLHDLPTELPRAHRAPQGFWRPLAQYVAWLRVRRTRRLHHRCAVSHRFETPAELFARQYPSSYLQAFSGL*
Ga0150985_11676824013300012212Avena Fatua RhizosphereMPSVLAASTLVDHRDVFDLPTEPPRARRALQGFWRTLTQYVAWLRVRRTRHVQHLCAVSYRFETPAELFARQYPSSYFRGFSGF*
Ga0150985_11738962013300012212Avena Fatua RhizosphereMPSVLATSTLVDHTNIHDLPIELPRARRAQQGFWRPLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPASYLQAFSGL*
Ga0134028_127040023300012224Grasslands SoilMPSVLATSTLVDHTNIHNLPIELPRARRAQQGFWRPLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARKYPASYLQAFSGL*
Ga0137387_1086385713300012349Vadose Zone SoilMPSVLATSTLVDHLNIHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRLQHLCAVSHGVETPAELFAR
Ga0134034_101798013300012375Grasslands SoilMPSVLATSTLVDYTNLHDLPIELPRARRAQEGFWRPLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPASYLQAFSGL*
Ga0134029_121331223300012377Grasslands SoilMPSVLATSTLVYHLNIHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0134057_130152113300012396Grasslands SoilMPSVLATSTLVDYTNLHDLPIELPRARRAQQGFWRPLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0134056_129394423300012397Grasslands SoilFMGTHPGTRSIAMPSVLATSTLVDHLNIHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0134051_130977613300012398Grasslands SoilMPSVLATSTLVDHLNIHNLPTEPPRAYRAQQGFGRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQAFSGL*
Ga0134059_101225813300012402Grasslands SoilMPSVLATSTLVDHLNIHDLPTEPPRAYRAQQGFWRTLAQYVAWLRVRRTRRMQHLCAVSHGFETPAELFARQYPSSYLQVFSGL*
Ga0157305_1025504123300012891SoilMPSVLTPSTLHDHIDGHDFPTMTPRTRGARQGFWRTLAQYVPWSRVQKTDRRQHLCAVS
Ga0137419_1115838613300012925Vadose Zone SoilIDIHDFPIELPRARRAQKGFWRTLTQFIAWLRVRRARRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL*
Ga0126369_1239597013300012971Tropical Forest SoilMPSVLATSIPVDHIDLHDLPTEPPRARIAQKGFWRTLAQYVAWLRVRRTYRMQHLCAVSHRFETPAELFARQYPSSYLQAYSGL*
Ga0132258_1074946713300015371Arabidopsis RhizosphereMPSVLTPSAIDIHDLPAELPRAGRAQKGLWPTLAQYVAWFRVRRTRRIQRLCAASYGFETPAELFARQYPASYLQVFSSL*
Ga0132258_1159007913300015371Arabidopsis RhizosphereMPSVLATSTLVDDIDVHDLPTEPPRARRAPQGFWRTCTQFVAWLRVRRTRRMQHLCAVSHRFETPAELFARHYPSSYLQAYSGL*
Ga0132258_1179134323300015371Arabidopsis RhizosphereVLATSTLADHIDVHHLPTELSRAYRAQKGFWRILAQCVAWLHARRIDRRQHLCAVSHQFETPVELFARQYPASYLLGFSSL*
Ga0132256_10029109523300015372Arabidopsis RhizosphereMPSVLATSIPVDHIDLHDLTIEPPRAGRAQKGFWRILAQCVAWLHARRIDRRQHLCAVSHKFETRVELFARQYPASYLLGFSSL*
Ga0132257_10293435423300015373Arabidopsis RhizosphereMPSVLATSTLADHIDVHHLPTEPSRAYRAQKGFWRILAQCVAWLHARRIDRRQHLCAVSHQFETPVELFARQY
Ga0132255_10020807033300015374Arabidopsis RhizosphereMGTHPGTRSIAMPSVLATSTLVDHIDVHDLSTEPPRAGRPQQGFWRTLAQYVAWIRVRRTQRMQHLCAVSYQFETPTELFARQYPGSYLQAFSGL*
Ga0190268_1078799113300018466SoilMPSALTSSTLLDHIDGHDFPTLPPRTRGARQGFWRTLAQYVPWSRVQKTYRRQHLCAVSHQFETPAELFARQYPSSYLQAFSGL
Ga0180110_129210813300019208Groundwater SedimentMPSVLTPSTLLDHIDGHDFPTMTPRAHGARQGFWRALAQYVSWSRVQKTDRRQHLGAVSQRFETPAELFARQYPASYLLGYTGC
Ga0180107_111950413300020064Groundwater SedimentMPSTLTSSTLLEHIDGHDFPTLPPRTRGARQGFWRTLAQYVPWSRVQKTYRRQHLCAVSQQFETPAELFARQYPASYLLGFSGC
Ga0242665_1014721313300022724SoilMPSVLATSTLVDYTNIHDLPIELPRARRAQQGFWRPLAQYVAWLRVRRTRRLQHLCAVSHGFETPAELFARQYPASYLQAFSGL
Ga0207662_1025588323300025918Switchgrass RhizosphereMPSVLATSTLADHIDVHHLPTEPSRAYRAQKGFWRILAQCVAWLHARRIDRRQHLCAVSHQFETPVELFARQYPASYLLGFSSL
Ga0207712_1051475313300025961Switchgrass RhizosphereMPSVLATSIPVDHIDLHDLLTEPPRAGRAQKGFWRTLAQYVAWLRVRRTHRMQHLCAVSHRFETPAELFARQYPSSYIQGFSGL
Ga0209076_117954813300027643Vadose Zone SoilMPSVLATSTLVDHIDIHDFPIELPRARRAQKGFWRTLTQFIAWLRVRRARRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0209799_105924513300027654Tropical Forest SoilMPSVLATSIPVDHIDLHDLPTEPPRARIAQKGFWRTLAQYVAWLRVRRTRRMQHLCAVSHRFETPAELFARQYPSSYLQAYSIL
Ga0209388_113348613300027655Vadose Zone SoilMPSVLATSTLVDHIDIHDFPIELPRARRAQKGFWRTLTQFIAWLRVRRARRMQHLCVVSHRFETPAELFARQYPSSYLQ
Ga0209180_1009290713300027846Vadose Zone SoilMPSALATSTLVDHIDVYDLPTEPSCSRGAQKGFWRILAQYVAWFRVRRAHRMQHLCVVSHRFETPAELFARQYPASYLQAYSGL
Ga0209814_1000379423300027873Populus RhizosphereMPSVLATSTPVDHRDVFDLPTEPPRARRALQGFWRTLAQYVAWLSVQRTSHMQHLCAVSYRFETPAELFARQYPSSYFRGFSSF
Ga0207428_1018397113300027907Populus RhizosphereMPSVLATSTLVDHRDVVDLPTEPPRARRALHGFWRTLAQYVAWLRVRRTSHMQQLCAVSYRFETPAELFARQYPSSYFRGFSGF
Ga0207428_1044457113300027907Populus RhizosphereMPSVLATSIPVDHIDLHDLTIEPPRAGRAQKGFWRTLTQYVAWLRVRRTHRLQHLCAVSYRFETPAELFARQYPASYLQAFSGL
Ga0209382_1008987833300027909Populus RhizosphereMPSVLATSTFVDHIDVHDLPTEPPRTRRAQQGFWRTLAQYVTWLRVRKTRRMQHLCAVSHRFETPAELFARQYPSSYLLGFSGF
Ga0137415_1026306823300028536Vadose Zone SoilMPSVLATSTLVDHIDIHDFPLELPRARRAQKGFWRTLTQFIAWLRVRRARRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0307504_1006188013300028792SoilMPSVLATSTFVDHIDVHDFPTELLRARRAQKGFWRTLTQFVAWLRVRRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0247646_101425223300030546SoilMPSVLTTSTLLDHIDVHDFPTMPPRTRGARQGFWRTLAQYVAWPRLQKTDRQQHLCAVSQRVETPAELFARQYPASYLLGFAGC
Ga0247640_121225123300030554SoilMPSVLATSTFVDHIDIHDLPTEPPRARRAQKGFWRTLAQYVAWLSVRRTHRMQHLCAVSHQFETPAELFARQYPSSYLQAFLGL
Ga0247636_1028845223300030634SoilMPSVLATSIPIDHIDIYDLPTEPHRARRAQKGFWRTLAQYVAWFRVRRTHHMQHLCAVSHQFETPAELFARQYPSSYLQAFSGL
Ga0308205_106158423300030830SoilMQSVLATSTLVERIDVHNLPRELPRARRAQKGFWRTLTQFVAWLRVRRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0308202_104199413300030902SoilMPSVLATSAFVDHIDVHDFPTELLRTRRAQKGFWRTLTQFVAWLRVRRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0308198_108408813300030904SoilMPSILATSTFVDHIDVHDFPTELLRARRAQKGFWRTLTQFVAWLRVWRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0308154_11484013300030986SoilMQSVLATSTLIDHIDVHNLPIELPRARRAQKGFWRTLTQFVAWLRVRRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0308196_107097613300030989SoilMPSILATSTFVDHIDVHDFPTELLRARRAQKGFWRTLTQFVAWLRVRRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0308189_1050904613300031058SoilMPSVLATSTFVDHIDVHDFPTELLRTRRAQKGFWRTLTQFVAWLRVRRSRRMQHLCVVSHRFETPAELFARQYPLSYLQAYSGL
Ga0308195_107958213300031123SoilMPSVLATSTFVDHIDVHDFPTELLRARRAQKGFWRTLTQFAAWLRVRRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0308151_105045113300031124SoilMPSVLATSTLVERIDVHNLPIELPRARRAQKGFWRTLTQFVAWLRVRRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0308182_102324723300031125SoilMPSVLATSTFVDHIDVHDFPTELLRARRAQKGFWRTLTQFVAWLRVWRSRRMQHLCVVSHRFETPAELFARQYPSSYLQAYSGL
Ga0310904_1073192913300031854SoilMPSALTSSTLLDHIDGHDFPTLPPRTRGARQGFWRTLAQYVPWSRVQKTYRRQHLCAVSQQVETPAELFARQYPASYLLGFAGSYWQVS
Ga0307409_10208520523300031995RhizosphereMPSVLGTSTVVDYMDVHDLPTEPPRACKAPKGLWRTLAQPVAWLRVWRASLRQHLCAVSHRFETPAELFARQYPSSYLQGFSGL
Ga0370545_036722_107_3613300034643SoilMPSVFATSTLVDDIDVHDLPTELPRARRAQQGFWRTVTQFVAWLRVRRTRRMQHLCAVSHRFETPAELFARQYPSSYLQAYSGL
Ga0370545_069381_316_5703300034643SoilMPSVLATSTLVDDIDVHDLPTEPPRVHRAQQGFWRTITPFMAWLRVRRTRRMQHLCAVSHRFETPAELFARQYPSTYLQAYSGL
Ga0314783_172616_150_4043300034662SoilMPSVLATSTLVDHRDVFDLPTELPHARRAPQGFWRTLSQYVAWLRVRRTRHMQHLCAVSYRFETPAELFARQYPSSYFRGFSGF
Ga0314788_201574_142_3963300034666SoilMPSVLTPSTLHDHIDGHDFPTMTPRTRGARQGFWRTLAQYVPWSRVQKTDRRQHLCAVSQRCETPAELFARQYPASYLLGYAGC
Ga0314792_022014_92_3463300034667SoilMPSAFTSSTLLDHIDGHDFPTLPPRTRGARQGFWRTLAQYVPWSRVQKTYRRQHLCAVSQQVETPAELFARQYPASYLLGFAGS
Ga0314793_010101_1052_13063300034668SoilMPSVLATSIPVDHIDLHDLTIEPPRAGRAQKGFWRTLTQYVAWLRVRRTHRLRHLCAVSYRFETPAELFARQYPASYLQAFSGL
Ga0314798_146885_116_3703300034673SoilMPSVLTRSTLHDHIDGHDFPTMTPRTRGARQGFWRTLAQYVPWSRVQKTDRRQHLCAVSQRCETPAELFARQYPASYLLGYAGC
Ga0314799_021541_64_3513300034674SoilMGTHPGTRSIAMPSVLATSISVDHIDLHDLTIEPPRAGRAQKGFWRTLTQYVAWLRVRRTHRLQHLCAVSYRFETPAELFARQYPASYLQAFSGL
Ga0314800_022692_78_3653300034675SoilMGTHPGTRSIAMPSVLATSIPVDHIDLHDLTIEPPRAGRAQKGFWRTLTQYVAWLRVRRTHRLQHLCAVSYRFETPAELFARQYPASYLQAFSGL
Ga0314803_010473_873_11273300034678SoilMPSVLATSTLVDHIDIHDLTTESPRACRAQKGFWRILTQYVAWLRVRRTHRLQHLCAVSYRFETPAELFARQYPASYLQAFSGL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.