Metagenome / Metatranscriptome Family F060023

Basic Information
Family ID	F060023
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	89 residues
Representative Sequence	MTEPTDEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQVLARLDDSE
Number of Associated Samples	108
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	54.14 %
% of genes near scaffold ends (potentially truncated)	29.32 %
% of genes from short scaffolds (< 2000 bps)	93.23 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Most Common Taxonomy
Group	Unclassified (57.143 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.038 % of family members)
Environment Ontology (ENVO)	Unclassified (37.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.376 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.00% β-sheet: 0.00% Coil/Unstructured: 45.00%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.4.5.17: Cell cycle transcription factor e2f-dp	d1cf7b_	1cf7	0.59566
a.104.1.0: automated matches	d3gw9a_	3gw9	0.57282
a.123.1.1: Nuclear receptor ligand-binding domain	d1g2na_	1g2n	0.56838
a.127.1.1: L-aspartase/fumarase	d7miwa1	7miw	0.55757
a.205.1.1: Hsp90 co-chaperone CDC37	d1us7b_	1us7	0.55314

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF02576	RimP_N	31.58
PF04679	DNA_ligase_A_C	14.29
PF08529	NusA_N	6.02
PF00484	Pro_CA	1.50
PF13184	KH_5	0.75
PF04760	IF2_N	0.75
PF02515	CoA_transf_3	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0779	Ribosome maturation factor RimP	Translation, ribosomal structure and biogenesis [J]	31.58
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	14.29
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.50
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
All Organisms	root	All Organisms	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
cellular organisms	root	All Organisms → cellular organisms	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	22.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.03 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.75 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.75 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.75 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01B3SO5	Not Available	576	Open in IMG/M
3300000956\|JGI10216J12902_110640164	Not Available	657	Open in IMG/M
3300002568\|C688J35102_119327695	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300002568\|C688J35102_120068098	Not Available	867	Open in IMG/M
3300003988\|Ga0055475_10123857	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005329\|Ga0070683_101450137	Not Available	660	Open in IMG/M
3300005332\|Ga0066388_100604460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1719	Open in IMG/M
3300005334\|Ga0068869_101322719	Not Available	636	Open in IMG/M
3300005337\|Ga0070682_100543145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	908	Open in IMG/M
3300005436\|Ga0070713_100460291	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300005437\|Ga0070710_11352046	Not Available	531	Open in IMG/M
3300005456\|Ga0070678_101431064	Not Available	646	Open in IMG/M
3300005466\|Ga0070685_10548287	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005530\|Ga0070679_101682379	Not Available	582	Open in IMG/M
3300005546\|Ga0070696_101700738	Not Available	544	Open in IMG/M
3300005548\|Ga0070665_100248683	Not Available	1779	Open in IMG/M
3300005548\|Ga0070665_100479092	Not Available	1255	Open in IMG/M
3300005548\|Ga0070665_101401499	Not Available	708	Open in IMG/M
3300005840\|Ga0068870_10948887	Not Available	610	Open in IMG/M
3300005841\|Ga0068863_101419035	Not Available	702	Open in IMG/M
3300005843\|Ga0068860_100737473	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300006028\|Ga0070717_11094343	Not Available	726	Open in IMG/M
3300006046\|Ga0066652_101283692	Not Available	691	Open in IMG/M
3300006047\|Ga0075024_100125196	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300006057\|Ga0075026_100401229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300006059\|Ga0075017_100034899	All Organisms → cellular organisms → Bacteria	3327	Open in IMG/M
3300006059\|Ga0075017_101202332	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300006354\|Ga0075021_10013007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4560	Open in IMG/M
3300006354\|Ga0075021_10352434	Not Available	918	Open in IMG/M
3300006755\|Ga0079222_12371207	Not Available	531	Open in IMG/M
3300006854\|Ga0075425_101331104	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300006881\|Ga0068865_102190018	Not Available	503	Open in IMG/M
3300007076\|Ga0075435_100815273	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300009012\|Ga0066710_102620797	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300009038\|Ga0099829_10123399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2042	Open in IMG/M
3300009094\|Ga0111539_11588261	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300009098\|Ga0105245_10391912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1386	Open in IMG/M
3300009101\|Ga0105247_11764542	Not Available	514	Open in IMG/M
3300009137\|Ga0066709_100737335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1421	Open in IMG/M
3300009174\|Ga0105241_10850440	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300009176\|Ga0105242_10398525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1284	Open in IMG/M
3300009176\|Ga0105242_13099802	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300009177\|Ga0105248_10450621	Not Available	1450	Open in IMG/M
3300009177\|Ga0105248_12773326	Not Available	559	Open in IMG/M
3300009551\|Ga0105238_10931347	Not Available	888	Open in IMG/M
3300009551\|Ga0105238_11544413	Not Available	693	Open in IMG/M
3300009553\|Ga0105249_12281815	Not Available	614	Open in IMG/M
3300009553\|Ga0105249_12743408	Not Available	564	Open in IMG/M
3300009789\|Ga0126307_10004164	Not Available	9997	Open in IMG/M
3300009840\|Ga0126313_11243417	Not Available	614	Open in IMG/M
3300010039\|Ga0126309_10300859	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300010045\|Ga0126311_10299090	Not Available	1211	Open in IMG/M
3300010166\|Ga0126306_10063837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2583	Open in IMG/M
3300010166\|Ga0126306_10783735	Not Available	768	Open in IMG/M
3300010371\|Ga0134125_11069037	Not Available	884	Open in IMG/M
3300010396\|Ga0134126_10093061	All Organisms → cellular organisms → Bacteria	3713	Open in IMG/M
3300011332\|Ga0126317_10320756	Not Available	507	Open in IMG/M
3300011332\|Ga0126317_10576018	Not Available	642	Open in IMG/M
3300012212\|Ga0150985_104175423	Not Available	603	Open in IMG/M
3300012212\|Ga0150985_118988337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2491	Open in IMG/M
3300012212\|Ga0150985_120471199	Not Available	538	Open in IMG/M
3300012353\|Ga0137367_10803152	Not Available	653	Open in IMG/M
3300012469\|Ga0150984_117861446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1486	Open in IMG/M
3300012469\|Ga0150984_120150689	Not Available	843	Open in IMG/M
3300012930\|Ga0137407_10446733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1202	Open in IMG/M
3300012951\|Ga0164300_10399284	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300012955\|Ga0164298_11102585	Not Available	594	Open in IMG/M
3300012958\|Ga0164299_10793620	Not Available	674	Open in IMG/M
3300012961\|Ga0164302_10154345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1356	Open in IMG/M
3300012961\|Ga0164302_10524679	Not Available	841	Open in IMG/M
3300012985\|Ga0164308_10399396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1124	Open in IMG/M
3300012986\|Ga0164304_11079307	Not Available	641	Open in IMG/M
3300012987\|Ga0164307_10080432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1979	Open in IMG/M
3300012988\|Ga0164306_10115983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1774	Open in IMG/M
3300013296\|Ga0157374_11460363	Not Available	707	Open in IMG/M
3300013297\|Ga0157378_11761837	Not Available	667	Open in IMG/M
3300013297\|Ga0157378_12761932	Not Available	543	Open in IMG/M
3300013306\|Ga0163162_12015848	Not Available	661	Open in IMG/M
3300013306\|Ga0163162_12755005	Not Available	566	Open in IMG/M
3300013308\|Ga0157375_10577374	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300014745\|Ga0157377_10926107	Not Available	654	Open in IMG/M
3300014968\|Ga0157379_10378219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1299	Open in IMG/M
3300014969\|Ga0157376_11212239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300014969\|Ga0157376_11560736	Not Available	694	Open in IMG/M
3300015374\|Ga0132255_106360062	Not Available	500	Open in IMG/M
3300017965\|Ga0190266_11377073	Not Available	500	Open in IMG/M
3300018064\|Ga0187773_10552443	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300018469\|Ga0190270_10380485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1297	Open in IMG/M
3300018476\|Ga0190274_11002913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	909	Open in IMG/M
3300018481\|Ga0190271_10196717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2002	Open in IMG/M
3300018481\|Ga0190271_10416604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1441	Open in IMG/M
3300020069\|Ga0197907_10871614	Not Available	674	Open in IMG/M
3300020070\|Ga0206356_10241991	Not Available	657	Open in IMG/M
3300025911\|Ga0207654_11361209	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300025927\|Ga0207687_10198999	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300025929\|Ga0207664_11194191	Not Available	679	Open in IMG/M
3300025934\|Ga0207686_10842575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300025935\|Ga0207709_10863504	Not Available	734	Open in IMG/M
3300025937\|Ga0207669_11704599	Not Available	538	Open in IMG/M
3300025972\|Ga0207668_11859832	Not Available	543	Open in IMG/M
3300026023\|Ga0207677_10328816	Not Available	1273	Open in IMG/M
3300027894\|Ga0209068_10131533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1342	Open in IMG/M
3300027915\|Ga0209069_10152518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1150	Open in IMG/M
3300027915\|Ga0209069_10956156	Not Available	522	Open in IMG/M
3300028379\|Ga0268266_10216716	Not Available	1758	Open in IMG/M
3300028381\|Ga0268264_11732357	Not Available	635	Open in IMG/M
3300028787\|Ga0307323_10370524	Not Available	513	Open in IMG/M
3300028875\|Ga0307289_10249067	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300028885\|Ga0307304_10539485	Not Available	537	Open in IMG/M
3300029984\|Ga0311332_11575814	Not Available	533	Open in IMG/M
3300030336\|Ga0247826_11761546	Not Available	507	Open in IMG/M
3300030829\|Ga0308203_1034581	Not Available	718	Open in IMG/M
3300031058\|Ga0308189_10493480	Not Available	526	Open in IMG/M
3300031198\|Ga0307500_10278628	Not Available	525	Open in IMG/M
3300031251\|Ga0265327_10025388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3456	Open in IMG/M
3300031251\|Ga0265327_10119828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1248	Open in IMG/M
3300031251\|Ga0265327_10140526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300031251\|Ga0265327_10143649	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300031251\|Ga0265327_10145348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1105	Open in IMG/M
3300031544\|Ga0318534_10485450	Not Available	706	Open in IMG/M
3300031544\|Ga0318534_10560648	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300031681\|Ga0318572_10922799	Not Available	519	Open in IMG/M
3300031846\|Ga0318512_10172460	Not Available	1051	Open in IMG/M
3300031879\|Ga0306919_11227879	Not Available	569	Open in IMG/M
3300031896\|Ga0318551_10926172	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300031918\|Ga0311367_11773698	Not Available	600	Open in IMG/M
3300032065\|Ga0318513_10636779	Not Available	522	Open in IMG/M
3300032782\|Ga0335082_10921669	Not Available	737	Open in IMG/M
3300032955\|Ga0335076_10666498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300033004\|Ga0335084_10474265	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300033433\|Ga0326726_11622328	Not Available	630	Open in IMG/M
3300034177\|Ga0364932_0078183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1253	Open in IMG/M
3300034819\|Ga0373958_0157363	Not Available	573	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.65%
Host-Associated	Host-Associated	40.60%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.62%
Plants	Host-Associated → Plants	40.60%
Aquatic	Environmental → Aquatic	9.02%
Solid Waste	Engineered → Solid Waste	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.53%
Sediment	Environmental → Aquatic → Sediment	6.77%
Peat	Environmental → Terrestrial → Peat	2.26%
Freshwater	Environmental → Aquatic → Freshwater	1.50%
Marine	Environmental → Aquatic → Marine	0.75%
Floodplain	Environmental → Terrestrial → Floodplain	0.75%
Grass	Engineered → Solid Waste → Grass	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.53%
Loam	Environmental → Terrestrial → Soil → Loam	9.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.26%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.50%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.26%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.26%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.26%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.26%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.50%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.50%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.75%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003988	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_00944290	2170459017	Switchgrass, Maize And Mischanthus Litter	EEGPSVSLLAGQLEFLFEEHPEFRHVAVAELVTRLNEEDRWARAIARYPSRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTDEPE
JGI10216J12902_1106401642	3300000956	Soil	VSDHDSGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIAKYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGRADDD*
C688J35102_1193276951	3300002568	Soil	VSDHDPGPTVGTLAGQLGYMFEDDPSLRHAPVAQLVARLNEEDRLARAIAKYPNHTDAEIHAHVAEFHDRIGAVDVEKARQQALAR
C688J35102_1200680981	3300002568	Soil	MSDTESDGPSVSRLAGQLEYLFEEHPEFRHVAVAELVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVEVEQARQQVLARTEEPE*
Ga0055475_101238571	3300003988	Natural And Restored Wetlands	MSNSDSSAGPSVSLLAGQLEYLFEEHPELRHAPVAQLVARLNEEDRWARAIARYPNRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTDPPA*
Ga0070683_1014501371	3300005329	Corn Rhizosphere	VSEPTAPGPSVSRLAGQLEYLFEEHPELRTAPVAELVARLNEEDRWARAITTYPNRSDAEVHAHLAEFHDRIGAVEVEQARQQVLARTDDPE*
Ga0066388_1006044602	3300005332	Tropical Forest Soil	VSDHDSGPTVGKLAGQLGYMFEHDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDD*
Ga0068869_1013227192	3300005334	Miscanthus Rhizosphere	VAMTEPTEEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDD*
Ga0070682_1005431452	3300005337	Corn Rhizosphere	VSDHDPGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDG*
Ga0070713_1004602911	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RSSVSDHDPGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDG*
Ga0070710_113520461	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSDDAPSVGKLAGQLDYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDG*
Ga0070678_1014310642	3300005456	Miscanthus Rhizosphere	SVSRLAGQLEYLFEEHPEMRHASVAELVARLNTEDRWARAITRYPNRSDADVHAHLAEFHDRIGAVEVEQARQQVLARTDEPE*
Ga0070685_105482871	3300005466	Switchgrass Rhizosphere	MTESTDEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFSDDD*
Ga0070679_1016823791	3300005530	Corn Rhizosphere	VSEPTAPGSSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITAYPNRSDAEVHAHLAEFHDRIGAVEVEQARQQVLARTDDPE*
Ga0070696_1017007382	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	YMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDG*
Ga0070665_1002486833	3300005548	Switchgrass Rhizosphere	MAHDTGDVPTGGSGGGPSISRLTGQLEYMFEDDPTLRDAPVAALVARLNEEDRWARAIQAYPNRSDAEVHGHLAEFHDRIGAVEVEHARQQALARLERDA*
Ga0070665_1004790922	3300005548	Switchgrass Rhizosphere	MSDAEDTSPPSVSRLAGQLEYLFEEHPELRAAPVAQLVARLNEEDRWARAITRYPNRSDAEVHSHLAEFHDRIGAVEVEQARQTVLARTEEPE*
Ga0070665_1014014991	3300005548	Switchgrass Rhizosphere	VAMTEPTEEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDG*
Ga0068870_109488871	3300005840	Miscanthus Rhizosphere	SVSILAGQLGYMFEDDPTLRDAPVAQLVARLNEEDRWARAMAQYPNRSDAEVHQHLAEFHDRIGAVEVEHARQQALGDAEE*
Ga0068863_1014190352	3300005841	Switchgrass Rhizosphere	MSDDTPSVSRLAGQLGYMFEDDPALREVPIAQLVARLNEEDRWARAIARYPNRSDAEVHQHLAEFHDRIGAVDVEHARRQALGDAGSDEEE*
Ga0068860_1007374732	3300005843	Switchgrass Rhizosphere	MTEPTDEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQVLARLDDSE*
Ga0070717_110943432	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	SVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDG*
Ga0066652_1012836922	3300006046	Soil	VSDDDPAPSVGKLAGQLGYMFEDDPSLRHAPVAQLVARLNEEDRLARAIARYPNEPDAEIHRRLAEFHDRIGAVDVEQARHQALAQLDDD*
Ga0075024_1001251962	3300006047	Watersheds	VADPQDAPSIGKLAGQLGYLFEDDPALRDAPVDELVARLNRDDRLARAIARYPNRTDAEIRAHLEEFDDRIGVDDVEQARRLATGDG*
Ga0075026_1004012291	3300006057	Watersheds	SVSDASSPRDGGGPSVARLAGQLGYMFDDDPTLRDAPVAQLVARLNEEDRLSRAIARYPNHTDAEIHAHLAEFHDRIGAVDVEHARRQALGTTDDG*
Ga0075017_1000348992	3300006059	Watersheds	VSDASSSRDEGGPSVARLAGQLGYMFEDDPSLRDAPLAQLVARLNEQDRLARAIAKYPNRTDAEIHAHLAEFHDRIGAVDVEHARRQALGTTDDD*
Ga0075017_1012023321	3300006059	Watersheds	VSDVGGGPSVARLAGQLGYMFEDDPSLRDAPLAQLVARLNEQDRLARAIAEYPNHTDAEIHAHLAEFHDRIGAVDVEHARRQALG
Ga0075021_100130073	3300006354	Watersheds	VPDAEEARPSIARLAGQLGYLFDDEPALRTAPVEQLAARLNHADRLARAIARYPNRTDAEIQAHLDEFADRIPSDDVEQARRQVLGEA*
Ga0075021_103524342	3300006354	Watersheds	VSDPEAGPSIARLAGQLGYLFDDEPSLRDASVEQLTARLNQADRLARAIAHYPNRTDAEIRTHLDEFADRISSEDVEQACRQALGHD*
Ga0079222_123712071	3300006755	Agricultural Soil	MSDEAPSVSRLAGQLEYLFEEHPELRHAAVAELVSRLNTEDRWARAIARYPNRSDAEVHQHLAEFHDRIGAVDVEQARQQVLARTDEPEGG*
Ga0075425_1013311042	3300006854	Populus Rhizosphere	VSDHDSGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIAKYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGRVD
Ga0068865_1021900182	3300006881	Miscanthus Rhizosphere	QLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDD*
Ga0075435_1008152732	3300007076	Populus Rhizosphere	VSDHDSGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIAKYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGRVDDD*
Ga0066710_1026207972	3300009012	Grasslands Soil	MSDDAPSVGKLAGQLGYMFEDDPALRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHRHVAEFHDRIGAVDVERARR
Ga0099829_101233993	3300009038	Vadose Zone Soil	MTETGPSVVTLAGQLGYLFEDDPSLAGAPAEQLAARLNHDDRLARAIAKYPNRSDAEIQSHLGEFSDRISATDVEAARRMVRGTSSDAE*
Ga0111539_115882613	3300009094	Populus Rhizosphere	MSDEAPSVSRLAGQLEYLFEEHPELRHAAVAELVSRLNTEDRWARAIARYPNRSDAEVHQHLAEFHDRIGAVDVEQARQQVLARTDEPEAG*
Ga0105245_103919121	3300009098	Miscanthus Rhizosphere	MSEPTDAESAEGAPSVSRLAGQLEYLFEEHPEMRHASVAELVARLNEEDRLARAIRKYPNHTDAEIHRHLAEFHDRIGAVEVEQARQQVLARTDEPE*
Ga0105247_117645422	3300009101	Switchgrass Rhizosphere	MTEPTDEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDG*
Ga0066709_1007373352	3300009137	Grasslands Soil	MSDDAPSVGKLAGQLGYMFEDDPALRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHRHVAEFHDRIGAVDVERARRQALGNVDDG*
Ga0105241_108504401	3300009174	Corn Rhizosphere	VSDHDPGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHANLAEFHDRIGAVDVEKARQQALGGLDDG*
Ga0105242_103985253	3300009176	Miscanthus Rhizosphere	MTEPTEEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDG*
Ga0105242_130998021	3300009176	Miscanthus Rhizosphere	VSDHDPGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRWARAITRYPNRSDAEVHAHLAEFHDRIGAVVV
Ga0105248_104506213	3300009177	Switchgrass Rhizosphere	MTEPTDEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHAR
Ga0105248_127733262	3300009177	Switchgrass Rhizosphere	VSRLAGQLEYLFEEHPELRAAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDG*
Ga0105238_109313472	3300009551	Corn Rhizosphere	VSEPTASGPSVSRLAGQLEYLFEEHPELRTAPVAELVARLNEEDRWARAITTYPNRSDAEVHAHLAEFHDRIGAVDVEHARQQALERFEDNG*
Ga0105238_115444132	3300009551	Corn Rhizosphere	MSHTDSTEPAAEGSPSVSRLAGQLEYLFEEHPELRHAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDG*
Ga0105249_122818151	3300009553	Switchgrass Rhizosphere	MTEPTEEGPSVSRLAGQLEYLFEEHPELRHASVAELVSRLNTEDRWARAITRYPNRSDAEVHSHLAEFHDRIGAVDVEEARQQVLARTDEP
Ga0105249_127434081	3300009553	Switchgrass Rhizosphere	DSRAMSDDESSAPSVSRLAGQLEYLFEEHPELRHAPVAQLVARLNEEDRWARAITRYPNRSDAEVHAHLAEFHDRIGAVVVEQARQQVLDRTEEPE*
Ga0126307_100041644	3300009789	Serpentine Soil	LAGQLEYLFEEHPEFRHVAVAELVTRLNQEDRWARAIARYPNRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTEDPE*
Ga0126313_112434171	3300009840	Serpentine Soil	LAGQLEYLFEEHPELRHAPVAQLVARLNEEDRWARAIARYPNRSDAEVHGHLAEFHDRIGAVDVEHARQEALERLGDDG*
Ga0126309_103008593	3300010039	Serpentine Soil	LAGQLEYLFEEHPELRHAPVAELVARLNEEDRWARAIARYPSRSDAEVHGHLAEFHDRIGAVDVEHARQEALERLGDDG*
Ga0126311_102990903	3300010045	Serpentine Soil	AGQLEYLFEEHPEFRHVAVAELVTRLNQEDRWARAIARYPNRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTEDPE*
Ga0126306_100638373	3300010166	Serpentine Soil	MSDTDSNDPTDGAPSVSRLAGQLEYLLEEHPELRRAPVAQLVARLNEEDRWARAITRYPNRSDAEVHAHLAEFHDRIGAVQVEHARQQVLARTEEPE*
Ga0126306_107837353	3300010166	Serpentine Soil	MSDEAPSVSRLAGQLEYLFEEHPELRAASVAELVARLNTEDRWARAITRYPNRSDAEVHSHLAEFHDRIGAVEVEQARQQV
Ga0134125_110690373	3300010371	Terrestrial Soil	VSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITAYPNRSDAEVHAHLAEFHDRIGAVEVEEARQQVLARTDDVE*
Ga0134126_100930614	3300010396	Terrestrial Soil	VSDHDSGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDG*
Ga0126317_103207561	3300011332	Soil	MTEPTEEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHAHLAEFHDRIGAVEVEQARQQVLARTDDSEGG*
Ga0126317_105760182	3300011332	Soil	VNEAVNEPSGDSPSVSRLAGQLEYLFEEHPEMRGAPVAQLVARLNEEDRWARAITRYPNRSDAEVHGHLAEFHDRIGAVAVEQARQQVLARTDERE*
Ga0150985_1041754231	3300012212	Avena Fatua Rhizosphere	MMSDAEDMSPPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAIAEYPNRSDAEVHSHLAEFHDRIGAVQVEQARQQVLSRTDRDE*
Ga0150985_1189883374	3300012212	Avena Fatua Rhizosphere	VSDHDPGPTVGTLAGQLGYMFEDDPSLRHAPVAQLVARLNEEDRLARAIAKYPNHTDAEIHAHVAEFHDRIGAVDVEKARQQALARARDD*
Ga0150985_1204711992	3300012212	Avena Fatua Rhizosphere	VSDPTGQNHHVTDPTEDHPSVSRLAGQLEYLFEEHPEFRHVAVAELVARLNEEDRWARAITRYPNRSDAEVHSHLAEFHDRIGAVEVEQARQTVLARTDDPE*
Ga0137367_108031522	3300012353	Vadose Zone Soil	VSDHDAGPSVGKLAGQLGYMFDDDPSLRDAPIAQLVARLNEEDRLARAIARYPNHTDAEIHMHLAEFHDRIGAVEVERARQQALGNLDDD*
Ga0150984_1178614462	3300012469	Avena Fatua Rhizosphere	VTDPTEDHPSVSRLAGQLEYLFEEHPEFRHVAVAELVARLNEEDRWARAITRYPNRSDAEVHSHLAEFHDRIGAVEVEQARQTVLARTDDPDDGRGI*
Ga0150984_1201506892	3300012469	Avena Fatua Rhizosphere	MTEPTEEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARRQALERLSDDD*
Ga0137407_104467332	3300012930	Vadose Zone Soil	MADASSDAPSVSRLAGQLGYMFDDDPRLRDAPVAQLVARLNEEDRWARAITKYPNRSDAEVHGHLAEFHDRIGAVEVEKARRQVLEESDDAG*
Ga0164300_103992842	3300012951	Soil	MSDDAPSVGKLAGQLDYMFEDDPSLRDAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEKARRQALGGLDEG*
Ga0164298_111025851	3300012955	Soil	MTESTEEGPSVSRLTGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARHQALERFSDDD*
Ga0164299_107936202	3300012958	Soil	VSDHDPGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGPDDG*
Ga0164302_101543451	3300012961	Soil	LAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFSHDD*
Ga0164302_105246792	3300012961	Soil	MTEPTDDGPSVSRLAGQLEFMFEEHPELRAAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEQTRQQALGSVDD*
Ga0164308_103993961	3300012985	Soil	MTEPTDDGPSVSRLAGQLEFMFEEHPELRAAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDG*
Ga0164304_110793072	3300012986	Soil	VSDRDSGPSVGTLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTNAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDG*
Ga0164307_100804323	3300012987	Soil	MNESTGSGPPEEGPSVSRLAGQLEYLFEEHPEFRHVAVAELVTRLNEEDRWARAIARYPSRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTDEPE*
Ga0164306_101159833	3300012988	Soil	MNESTGSGPPEEGPSVSRLAGQLEYLFEEHPEFRHVAVAELVTRLNEEDRWARAIARYPSRSDAEVHGHLAEFHDRIGAVEVAQAGQQVLARTDEPD*
Ga0157374_114603631	3300013296	Miscanthus Rhizosphere	VSDHDPGPSVGKLAGQLGDMFDDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDG*
Ga0157378_117618371	3300013297	Miscanthus Rhizosphere	AGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDG*
Ga0157378_127619322	3300013297	Miscanthus Rhizosphere	MNDEDSSSSSAPSVSRLAGQLEYLFEEHPELRHVAVAELVTRLNQEDRWARAITRYPNRSDAEVHGHLAEFHDRSGAVEVEEARQQVLARTDDAEDG*
Ga0163162_120158482	3300013306	Switchgrass Rhizosphere	MTEPTDEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFSDDG*
Ga0163162_127550051	3300013306	Switchgrass Rhizosphere	PSVSRLAGQLEYLFEEHPEYRHVAVAELVTRLNEEDRWARAIARYPSRSDAEVHGHLAEFHDRIGAVVVEQARQQVLARTEEPE*
Ga0157375_105773741	3300013308	Miscanthus Rhizosphere	MTESTDEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHAHLAEFHDRIGAVVVEQARQQVLARTEEPE*
Ga0157377_109261072	3300014745	Miscanthus Rhizosphere	MTESTDEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFSHDD*
Ga0157379_103782191	3300014968	Switchgrass Rhizosphere	PTGGSGGGPSISRLTGQLEYMFEDDPTLRDAPVAALVARLNEEDRWARAIQAYPNRSDAEVHGHLAEFHDRIGAVEVEHARQQALARLERDA*
Ga0157376_112122391	3300014969	Miscanthus Rhizosphere	YLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERLSDDD*
Ga0157376_115607361	3300014969	Miscanthus Rhizosphere	MRDDLHVSHEDEGPGPSVSRLAGQLEYLFEEHPELRHVAVAELVTRLNQEDSWARAITRYPNRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTDEPQ*
Ga0132255_1063600621	3300015374	Arabidopsis Rhizosphere	MRDDLDVSHEDEGPGPSVSRLAGQLEYLFEEHPELRHASVAELVARLNTEDRWARAITRYPNRSDAEVHSHLAEFHDRIGAVEVEEARQQVLARTDDAGDG*
Ga0190266_113770731	3300017965	Soil	MSDDDVGPSVSLLAGQLEYLFEDHPELRHVAVAELVTRLNEEDRWARAIARYPNRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTDEPE
Ga0187773_105524432	3300018064	Tropical Peatland	VTAPTVSKLAGQLGYMFEDDPRLRTAPVEQLAARLNLEDRLARAIARYPLHTDAEIRAHLDEFEDRIPVADVAEARRRALESLG
Ga0190270_103804852	3300018469	Soil	VSDSSTGPSVSILAGQLGYLFDDDPSLRDAPVAQLVSLLNEKDRWARAISTYPGRSDAEVHGHLAEFHDRIGAVEVEHARQQVLARDDE
Ga0190274_110029132	3300018476	Soil	VSRLAGQLEYMFEEDPALREAPISQLVARLNEEDRWARSIATYPDLNDSERHGHLAEFHNRIGAIEVQQARRAALARLEGDET
Ga0190271_101967172	3300018481	Soil	VSDSSTGPSVSILAGQLGYLFDDDPSLRDAPVAQLVSLLNEKDRWARAISTYPGRSDAEVHGHLAEFHDRIGAVEVEHARQQVLAQDDD
Ga0190271_104166042	3300018481	Soil	MGDDAPSVGKLAGQLGFMFEEDPSLRDAPVAHLVARLNEDDRLARVIAKYPNRSDAEVHRHLAEFHDRIGAVEVEQARQQALGRS
Ga0197907_108716141	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VSEPTAPGSSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITAYPNRSDAEVHAHLAEFHDRIATVEVEEARQQVLARTDDPE
Ga0206356_102419912	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VSEPTAPGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITAYPNRSDAEVHAHLAEFHDRIGAVEVEEARQQVLIRTDDTE
Ga0207654_113612092	3300025911	Corn Rhizosphere	VSDHDPGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHANLAEFHDRIGAVDV
Ga0207687_101989991	3300025927	Miscanthus Rhizosphere	VAMTEPTEEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDD
Ga0207664_111941912	3300025929	Agricultural Soil	VSDHDPGPSVGKLAGQLGYMFDDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLDDG
Ga0207686_108425752	3300025934	Miscanthus Rhizosphere	GQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDG
Ga0207709_108635042	3300025935	Miscanthus Rhizosphere	MSDDAPSVGKLAGQLDYMFEDDPSLRDAPVAQLVARLNEEDRLARAIRKYPNHTDAEIHRHLAEFHDRIGAVDVEQARQQALGSVDD
Ga0207669_117045991	3300025937	Miscanthus Rhizosphere	SRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFEDDG
Ga0207668_118598322	3300025972	Switchgrass Rhizosphere	MTEPTDEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFSDDG
Ga0207677_103288162	3300026023	Miscanthus Rhizosphere	VAMTEPTEEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDADVHAHLAEFHDRIGAVEVEQARQQVLARTDEPE
Ga0209068_101315332	3300027894	Watersheds	VPDAEEARPSIARLAGQLGYLFDDEPALRTAPVEQLAARLNHADRLARAIARYPNRTDAEIQAHLDEFADRIPSDDVEQARRQVLGEA
Ga0209069_101525182	3300027915	Watersheds	VADPQDAPSIGKLAGQLGYLFEDDPALRDAPVDELVARLNRDDRLARAIARYPNRTDAEIRAHLEEFDDRIGVDDVEQARRLATGDG
Ga0209069_109561561	3300027915	Watersheds	MTDDDHPSVSLLAGQLEYLFEEHPELRAAPAAQLVARLNEEDRWARAITRYPNRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTDEP
Ga0268266_102167163	3300028379	Switchgrass Rhizosphere	MAHDTGDVPTGGSGGGPSISRLTGQLEYMFEDDPTLRDAPVAALVARLNEEDRWARAIQAYPNRSDAEVHGHLAEFHDRIGAVEVEHARQQALARLERDA
Ga0268264_117323572	3300028381	Switchgrass Rhizosphere	MTEPTDEGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERYSD
Ga0307323_103705241	3300028787	Soil	MTDDAPSIGRLAGQLGYMFDDEPSLREAPVAQLVARLNEEDRLARAIRKYPNHTDAEIHRHLAEFHDRIGAVDVEQARQQALGSVDD
Ga0307289_102490671	3300028875	Soil	MSDDAPSVGKLAGQLDYMFEDDPTLRDAPVAQLVARLNEEDRLARAIRKYPNHTDAEIHRHLAEFHDRIGAVDVEQARQQALGSVDD
Ga0307304_105394851	3300028885	Soil	PTRCEADSRPMTEHTEEGPSVSRLAGQLEYLFEEHPELRSAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFSDDG
Ga0311332_115758141	3300029984	Fen	MSDDDTSDAPSVSRLAGQLEYLFEEHPEFRHVAVAELVARLNEEDRWARAITRYPNRSDAEVHGHLAEFHDRIGAVEVEQARQEALARTDEAG
Ga0247826_117615462	3300030336	Soil	LEYLFEEHPELRHAPVAQLVARLNEEDRWARAITRYPNRSDNEVHAHLAEFHDRIGAVEVEQARQQVLARTEEPE
Ga0308203_10345812	3300030829	Soil	MTEPTEEGPSVSRLAGQLEYLFEEHPELRSAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIVAVDVEHARQQALERFSDDG
Ga0308189_104934801	3300031058	Soil	MTESTEGPSVSRLAGQLEYLFEEHPELRAAPVAQLVARLNEEDRWARAITRYPNRSDAEVHQHLAEFHDRIGAVDVEHARQQALERFSDDG
Ga0307500_102786281	3300031198	Soil	MPDDAPSVGRLAGQLGYMFDDDPSLRDAPVAQLVARLNEEDRLARAIAKYPNRPDAEIRGHLAEFHDRIGAVEVEQARQQALGRR
Ga0265327_100253883	3300031251	Rhizosphere	MSDAAPSKAKLAGQLGYMFEDDPALRAAPVQQLAERLNREDRLARAIAKYPHDNDREIAAHLPEFAERITAADVEAALADALGGLGDRDAD
Ga0265327_101198282	3300031251	Rhizosphere	VSDASSSGDGGAPSVARLAGQLGYMFEDDPTLRDAPLAQLVARLNEEDRLARAIAKYPNHTDAEIHAHLAEFHDRIGAVDVEHARRQALGITDDD
Ga0265327_101405263	3300031251	Rhizosphere	SRLAGQLEYLFEEHPEFRHVAVAELVARLNEEDRWARAITRYPNRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTDDPE
Ga0265327_101436491	3300031251	Rhizosphere	VIVRRARITTVSEPTEDGPSVSRLAGQLEYLFEEHPELRTAPVAQLVARLNEEDRWARAITRYPNRSDAEVHSHLAEFHDRIGAVVVEQARQEALSRSEEPE
Ga0265327_101453481	3300031251	Rhizosphere	MSDPDTSEAPSVSRLAGQLEYLFEEHPDLRHVAVAELVARLNQEDRWARAITRYPNRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTDEPE
Ga0318534_104854502	3300031544	Soil	MTEPTDDGPSVSRLAGQLQYMFEDDPSLRDAPVAQLVARLNEEDRWARAIAQYPNRSDAEVHAHLAEFHDRIGAVAVEHARQQALEQLTRDD
Ga0318534_105606481	3300031544	Soil	VSDHDSGPTVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGALDDD
Ga0318572_109227991	3300031681	Soil	SRWSSGRSSVSDHDSGPTVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGALDDD
Ga0318512_101724604	3300031846	Soil	GQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGALDDD
Ga0306919_112278791	3300031879	Soil	MTEPTDDGPSVSRLAGQLQYMFEDDPSLRDAPVALLVARLNEEDRWARAIAQYPNRSDAEVHAHLAEFHDRIGAVAVEHARQQALEQLTRDD
Ga0318551_109261722	3300031896	Soil	VSDHDSGPTVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVE
Ga0311367_117736982	3300031918	Fen	MSDDDTSDAPSVSRLAGQLEYLFEEHPEFRHVAVAELVARLNEEDRWARAITRYPNRSDAEVHGHLAEFHDRIGAVEVEQARQQVLARTDDPE
Ga0318513_106367791	3300032065	Soil	MSTSDGPSVSKLAGQLQYMFEDNPALRDAPLAQLVARLNEEDRWARAIAMYPNRSDTEVHAHLAEFHDRIGAVDVEHARQQALEQLADD
Ga0335082_109216692	3300032782	Soil	PVSDDDTTDAPSVSRLAGQLGYLFEEHPELRDAPVAQLVARLNEEDRWARAIARYPNRSDAEVHAHLAEFHDRIGAVDVEHARQQALEQLEDD
Ga0335076_106664982	3300032955	Soil	VSELGGGPSVARLAGQLGYMFEDDPSLRDAPLAQLVARLNEEDRLARAIAKYPNHTDAEIHAHLAEFHDRIGAVDVEQARRQAMGISGDG
Ga0335084_104742652	3300033004	Soil	MSEPEHDGPSVSILAGQLEYMFEDDPSLKDAPVAQLVARLNEEDRWARAIATYPNRSDAEVHSHLAEFHDRIGAVAVEQARQQVLTRLGDAQ
Ga0326726_116223282	3300033433	Peat Soil	VSDDAPSVGKLAGQLGYMFDDDPSLRDAPVAQLVARLNEEDRLARAIAKYPNRSDAEIHRHLAEFHDRIGAVDVEHARKQALGIADDD
Ga0364932_0078183_1_258	3300034177	Sediment	MGERAPGERASGDDAPSVGKLAGQLGYMFDDDPSLRDAPVAQLVARLNEEDRLARAIAKYPNHTDAEIHRYLAEFHDRIGAVAVEQ
Ga0373958_0157363_262_534	3300034819	Rhizosphere Soil	VSDHDPGPSVGKLAGQLGYMFEDDPSLRDAPVAQLVARLNEEDRLARAIARYPNHTDAEIHAHLAEFHDRIGAVDVEKARQQALGGLGDG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060023

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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