NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F059853

Metagenome / Metatranscriptome Family F059853

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F059853
Family Type Metagenome / Metatranscriptome
Number of Sequences 133
Average Sequence Length 47 residues
Representative Sequence SVPAIIVTGADVPPPPRAAAVLRKDELTRERLEFTLRGVIRGEP
Number of Associated Samples 115
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.74 %
% of genes from short scaffolds (< 2000 bps) 92.48 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.985 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(19.549 % of family members)
Environment Ontology (ENVO) Unclassified
(24.060 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.105 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.22%    β-sheet: 15.28%    Coil/Unstructured: 62.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF00072Response_reg 77.44
PF07228SpoIIE 15.04
PF00989PAS 1.50
PF00756Esterase 0.75
PF08448PAS_4 0.75
PF08450SGL 0.75
PF01740STAS 0.75
PF13492GAF_3 0.75
PF00814TsaD 0.75
PF13185GAF_2 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 133 Family Scaffolds
COG0533tRNA A37 threonylcarbamoyltransferase TsaDTranslation, ribosomal structure and biogenesis [J] 0.75
COG1214tRNA A37 threonylcarbamoyladenosine modification protein TsaBTranslation, ribosomal structure and biogenesis [J] 0.75
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.75
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.75


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.98 %
UnclassifiedrootN/A6.02 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004152|Ga0062386_100966493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia705Open in IMG/M
3300005172|Ga0066683_10475974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia764Open in IMG/M
3300005175|Ga0066673_10420377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia783Open in IMG/M
3300005344|Ga0070661_100614133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia880Open in IMG/M
3300005347|Ga0070668_100759891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales859Open in IMG/M
3300005355|Ga0070671_101566180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales584Open in IMG/M
3300005434|Ga0070709_10237281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura atramentaria1308Open in IMG/M
3300005435|Ga0070714_101227402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia731Open in IMG/M
3300005435|Ga0070714_101725440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia611Open in IMG/M
3300005439|Ga0070711_100393366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1123Open in IMG/M
3300005455|Ga0070663_100021432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4299Open in IMG/M
3300005764|Ga0066903_108161963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales536Open in IMG/M
3300005843|Ga0068860_100028370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5387Open in IMG/M
3300006162|Ga0075030_100525204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales941Open in IMG/M
3300006755|Ga0079222_11800922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300006755|Ga0079222_12135540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia555Open in IMG/M
3300006881|Ga0068865_100088046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura atramentaria2246Open in IMG/M
3300006954|Ga0079219_10299701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales995Open in IMG/M
3300007255|Ga0099791_10560566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia557Open in IMG/M
3300009011|Ga0105251_10009229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5847Open in IMG/M
3300009038|Ga0099829_10856074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales755Open in IMG/M
3300009522|Ga0116218_1129410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1148Open in IMG/M
3300010159|Ga0099796_10581986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia504Open in IMG/M
3300010358|Ga0126370_11132778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia723Open in IMG/M
3300010373|Ga0134128_12789154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium phraense538Open in IMG/M
3300010376|Ga0126381_102021576All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales830Open in IMG/M
3300010397|Ga0134124_11548659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia692Open in IMG/M
3300010398|Ga0126383_11415409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia785Open in IMG/M
3300011120|Ga0150983_16282432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia581Open in IMG/M
3300012199|Ga0137383_10078520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura2384Open in IMG/M
3300012359|Ga0137385_10191331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1789Open in IMG/M
3300012491|Ga0157329_1022738All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia600Open in IMG/M
3300012683|Ga0137398_10460092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia871Open in IMG/M
3300012930|Ga0137407_10551528All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1079Open in IMG/M
3300012958|Ga0164299_11067570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia601Open in IMG/M
3300012989|Ga0164305_12037908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia524Open in IMG/M
3300013100|Ga0157373_10374866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1017Open in IMG/M
3300013100|Ga0157373_11460361All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia521Open in IMG/M
3300014169|Ga0181531_10154694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1387Open in IMG/M
3300014969|Ga0157376_11840120Not Available642Open in IMG/M
3300015356|Ga0134073_10364894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia535Open in IMG/M
3300016270|Ga0182036_10428575Not Available1036Open in IMG/M
3300017970|Ga0187783_11365700All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria510Open in IMG/M
3300018044|Ga0187890_10233683All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1037Open in IMG/M
3300018057|Ga0187858_10411897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales838Open in IMG/M
3300018482|Ga0066669_10183418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1582Open in IMG/M
3300019888|Ga0193751_1222373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia611Open in IMG/M
3300020069|Ga0197907_10668765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales926Open in IMG/M
3300020580|Ga0210403_10884148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia705Open in IMG/M
3300020581|Ga0210399_10521959Not Available986Open in IMG/M
3300020581|Ga0210399_11377078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia552Open in IMG/M
3300021170|Ga0210400_11493638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia536Open in IMG/M
3300021181|Ga0210388_11366974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia596Open in IMG/M
3300021374|Ga0213881_10469300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia569Open in IMG/M
3300021405|Ga0210387_10772585Not Available849Open in IMG/M
3300021432|Ga0210384_10911136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia779Open in IMG/M
3300021479|Ga0210410_10587122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales990Open in IMG/M
3300021559|Ga0210409_10282191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1499Open in IMG/M
3300021560|Ga0126371_10985127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia985Open in IMG/M
3300024232|Ga0247664_1043982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1035Open in IMG/M
3300024323|Ga0247666_1044255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales909Open in IMG/M
3300025320|Ga0209171_10310957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia837Open in IMG/M
3300025916|Ga0207663_10661295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia825Open in IMG/M
3300025929|Ga0207664_11233435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia666Open in IMG/M
3300025929|Ga0207664_11323536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium phraense640Open in IMG/M
3300025929|Ga0207664_12002082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia502Open in IMG/M
3300026498|Ga0257156_1108782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia577Open in IMG/M
3300026552|Ga0209577_10474194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia853Open in IMG/M
3300027030|Ga0208240_1020952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia709Open in IMG/M
3300027047|Ga0208730_1018319All Organisms → cellular organisms → Bacteria → Proteobacteria784Open in IMG/M
3300027307|Ga0209327_1047276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia620Open in IMG/M
3300027370|Ga0209010_1098202All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia500Open in IMG/M
3300027504|Ga0209114_1006248Not Available1728Open in IMG/M
3300027775|Ga0209177_10002990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura atramentaria3248Open in IMG/M
3300027787|Ga0209074_10120905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales910Open in IMG/M
3300027787|Ga0209074_10191939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia762Open in IMG/M
3300027829|Ga0209773_10380235All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300027853|Ga0209274_10048563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2009Open in IMG/M
3300027895|Ga0209624_10889432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia581Open in IMG/M
3300028906|Ga0308309_10382455All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1204Open in IMG/M
3300028906|Ga0308309_10406839All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1168Open in IMG/M
3300028906|Ga0308309_11791628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia519Open in IMG/M
3300029636|Ga0222749_10703817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia553Open in IMG/M
3300029943|Ga0311340_10238081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1789Open in IMG/M
3300030618|Ga0311354_10293425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1685Open in IMG/M
3300031231|Ga0170824_100090464All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales915Open in IMG/M
3300031231|Ga0170824_105911206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia669Open in IMG/M
3300031231|Ga0170824_128007305All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300031236|Ga0302324_100634723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1523Open in IMG/M
3300031543|Ga0318516_10155843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1313Open in IMG/M
3300031549|Ga0318571_10034557All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1428Open in IMG/M
3300031572|Ga0318515_10163349All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1189Open in IMG/M
3300031573|Ga0310915_10891734Not Available623Open in IMG/M
3300031713|Ga0318496_10098451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1567Open in IMG/M
3300031718|Ga0307474_10357542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1132Open in IMG/M
3300031719|Ga0306917_11214881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia585Open in IMG/M
3300031720|Ga0307469_10678340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia932Open in IMG/M
3300031723|Ga0318493_10049526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1982Open in IMG/M
3300031723|Ga0318493_10405009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia746Open in IMG/M
3300031723|Ga0318493_10821260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia524Open in IMG/M
3300031736|Ga0318501_10180144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1099Open in IMG/M
3300031754|Ga0307475_10673485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia826Open in IMG/M
3300031754|Ga0307475_11454431All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia527Open in IMG/M
3300031770|Ga0318521_10043221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura2289Open in IMG/M
3300031770|Ga0318521_10162092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1275Open in IMG/M
3300031879|Ga0306919_10915594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia672Open in IMG/M
3300031910|Ga0306923_11344373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia755Open in IMG/M
3300031912|Ga0306921_12562273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia528Open in IMG/M
3300031938|Ga0308175_101393671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia782Open in IMG/M
3300031938|Ga0308175_101472630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia760Open in IMG/M
3300031938|Ga0308175_102065340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia639Open in IMG/M
3300032009|Ga0318563_10429532All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia715Open in IMG/M
3300032160|Ga0311301_10727340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1386Open in IMG/M
3300032174|Ga0307470_10192212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1295Open in IMG/M
3300032180|Ga0307471_101044986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales983Open in IMG/M
3300032205|Ga0307472_101912680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300032770|Ga0335085_10578155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1268Open in IMG/M
3300032782|Ga0335082_10549736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1016Open in IMG/M
3300032828|Ga0335080_11427243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia687Open in IMG/M
3300032829|Ga0335070_10309703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1528Open in IMG/M
3300032895|Ga0335074_10492223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1277Open in IMG/M
3300032896|Ga0335075_11330549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia612Open in IMG/M
3300032897|Ga0335071_11001091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia782Open in IMG/M
3300032898|Ga0335072_11045639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia744Open in IMG/M
3300033158|Ga0335077_10967281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales852Open in IMG/M
3300033158|Ga0335077_11515306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia641Open in IMG/M
3300033412|Ga0310810_11414952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia529Open in IMG/M
3300033829|Ga0334854_091994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia725Open in IMG/M
3300034124|Ga0370483_0268950All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia585Open in IMG/M
3300034163|Ga0370515_0143320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1025Open in IMG/M
3300034818|Ga0373950_0039036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales903Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil19.55%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil7.52%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.02%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.26%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.26%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.76%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil3.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.01%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.01%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.01%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.26%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.26%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.50%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.50%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.50%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.50%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.50%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.75%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.75%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.75%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.75%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.75%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.75%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.75%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.75%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.75%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012491Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610Host-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300025320Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027030Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)EnvironmentalOpen in IMG/M
3300027047Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)EnvironmentalOpen in IMG/M
3300027307Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027370Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027504Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033829Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062386_10096649323300004152Bog Forest SoilLLARLPASVPAIIITGADVPSPPRAAALLRKDELTRERLEFTIRGIIRGAP*
Ga0066683_1047597423300005172SoilGMDGSALLARLPASVPAIIVTGADVPPSPRAAAVLRKDELTRERLEFTLRGVIRERS*
Ga0066673_1042037723300005175SoilMDGSALLARLPASMPVIIVTGADVLPPPRAAALLRKDELTRERLEFTLRGIIRSPS*
Ga0070661_10061413313300005344Corn RhizospherePAIVITSADLRPPPRAAALLRKDELTAERLEFTIRAVIGGPS*
Ga0070668_10075989113300005347Switchgrass RhizospherePAIIVTGADVTPPPRAAAMLRKDELTRERLEFTLRVIRGEP*
Ga0070671_10156618013300005355Switchgrass RhizosphereGLDGGALLARLPAEVPAIVITSADLRPPPRAAALLRKDELTAERLEFTIRAVIGGPS*
Ga0070709_1023728113300005434Corn, Switchgrass And Miscanthus RhizosphereDGGALLARLPAAIPAIVITSADLRPPARAAALLRKDELTRERLEFTLRAVIREAP*
Ga0070714_10122740213300005435Agricultural SoilRLPASVPAIIVTGADVLPPPRAAAMLRKDELTRERLEFTLRGIIRGPS*
Ga0070714_10172544013300005435Agricultural SoilATVPAIIVTGADVTPPPRAAAMLRKDELTRDRLEFTLRVIGGGP*
Ga0070711_10039336623300005439Corn, Switchgrass And Miscanthus RhizosphereALLARLPAEVPAIVITSADLRPPPRAAALLRKDELTAERLEFTIRAVIGGPS*
Ga0070663_10002143213300005455Corn RhizospherePAIIVTGADVTPPPRAAAMLRKDELTRDRLEFTLRVIRGEP*
Ga0066903_10816196313300005764Tropical Forest SoilPGLDGAALLARLPAAVPAIIITGADVPPPPRAAALLRKDEITRERLEFTIRGVIGGAP*
Ga0068860_10002837013300005843Switchgrass RhizosphereTVPAIIVTGADVTPPPRAAAMLRKDELTRERLEFTLRVIRGEP*
Ga0075030_10052520413300006162WatershedsLDRLPASVPAIIITGADVPPPPRAAALLRKDELTRERLEFTIRGVIRGTP*
Ga0079222_1180092223300006755Agricultural SoilTGADVAPPPRAAAMLRKDELTRERLEFTLRVIRGEP*
Ga0079222_1213554023300006755Agricultural SoilAIVITSADLRPPPRAAALLRKDELTAERLEFTIRAVIGGPS*
Ga0068865_10008804613300006881Miscanthus RhizosphereVPAIIVTGADVTPPPRAAAMLRKDELTRERLEFTLRVIRGEP*
Ga0079219_1029970113300006954Agricultural SoilIVTGADVTPPPRAAAVLRKDELTRDRLEFTLRVIWGKP*
Ga0099791_1056056623300007255Vadose Zone SoilPASVPAIVVTGADVPPPPRAAAVLRKDELTRERLEFTLRGIFRGPS*
Ga0105251_1000922953300009011Switchgrass RhizospherePASVPAIIVTGAEVAPPPRAAAMLRKDELTRDRLEFTLRGIIRSPS*
Ga0099829_1085607423300009038Vadose Zone SoilLARLPGSVPAIIITGADVPPPPRAAALLRKDELTRERLEFTIRGIIRGAP*
Ga0116218_112941013300009522Peatlands SoilDGGTLLARLPAALPAIIITGADLPPPPRAAALLRKDELTRERLEFTIRGVIRGTP*
Ga0099796_1058198623300010159Vadose Zone SoilMPGMDGSALLARLPASVPAIIVTGADVPAPTRAAAVLRKDELTRERLEFTLRGIIRSPS*
Ga0126370_1113277813300010358Tropical Forest SoilGTALLARLPARVPVIVVTGADVPPPPRAAGVLRKDELTRERLEFTLRGVLGRTS*
Ga0134128_1278915423300010373Terrestrial SoilLPAAVPAIVITSADLRPPPRAAALLRKDELTAERLEFTILAVIGGPS*
Ga0126381_10202157623300010376Tropical Forest SoilDVPPPPRAAAVLRKDELTRERLEFTLRAVIRDPS*
Ga0134124_1154865913300010397Terrestrial SoilRLPATVPAIIVTGADVTPPPRAAAMLRKDELTRERLEFTLRVIRGEP*
Ga0126383_1141540913300010398Tropical Forest SoilMPGVDGTALLARLPASVPAIIVTGADVPPSPRAAAVLRKDELTRERLEFTLRGVIRGEP*
Ga0150983_1628243223300011120Forest SoilVPAILVTGADVPLPARASAMLRKDELTRERLEFTIRGVIRSPR*
Ga0137383_1007852013300012199Vadose Zone SoilALLARLPASVPAIIVTGADVPPPPRAAAVLRKDELTRERLEFTLRGVMRGPS*
Ga0137385_1019133123300012359Vadose Zone SoilLPASVPAIIITGADVPPPPRAAALLRKDELTRERLEFTVRGVIRGAP*
Ga0157329_102273823300012491Arabidopsis RhizospherePAIIVTGADVTPPPRAAAVLRKDELTRDRLEFTLRVIWGKP*
Ga0137398_1046009223300012683Vadose Zone SoilLLARLPVSVPAVVVTGADVPAPPRAAAVLRKDELTRGRLEFTLRGVIRGPS*
Ga0137407_1055152813300012930Vadose Zone SoilMDGSALLARLPASVPAIIVTGADVLPPTRAAAMLRKDELTRERLEFTLRGIIRSPS*
Ga0164299_1106757023300012958SoilMDGSALLARLPASVPAIIVTGADVLPPPRAAAMLRKDELTRERLEFTLRGIIRSPS*
Ga0164305_1203790823300012989SoilPGMDGRALLARLPASVPAIIVTGADVPPPPRAAAVLRKDELTRERLEFTLRGIIRSPS*
Ga0157373_1037486623300013100Corn RhizosphereADVTPPPRAAAMLRKDELTRDRLEFTLRVIRGEP*
Ga0157373_1146036123300013100Corn RhizosphereRALLARLPASVPAIIVTGADVPPPPRAAAVLRKDELTRERLEFTLRGIIRSPS*
Ga0181531_1015469413300014169BogPAIVITGADAPAPPGAAALLRKDELTRERLEFAIRGVLGGAR*
Ga0157376_1184012013300014969Miscanthus RhizosphereTVPAIIVTGADVTPPPRAAAMLRKDELTRDRLEFTLRGMIRSPS*
Ga0134073_1036489423300015356Grasslands SoilVPAIIVTGADVPSPPRAAAMLRKDELTRERLEFTLRGVLGRTP*
Ga0182036_1042857513300016270SoilLLARLPAPVPAIVVTGADGPPPPRAAAVLRKDELTRERLEFTLRVVIRGES
Ga0187783_1136570013300017970Tropical PeatlandIIITGADVATPPRAAALLRKDELTRERLEFTIRTVLREIP
Ga0187890_1023368313300018044PeatlandASVPAIIVTSADGPAPPRAAALLCKDELTRERLEFTIRGVIRSTP
Ga0187858_1041189723300018057PeatlandARLPASVPAIIITGADVPAPPRTAALLRKDELTPDRLEFTIRGVLREVRGAAR
Ga0066669_1018341823300018482Grasslands SoilSALLARLPATVPAIIVTGADVTPPPRAAAMLRKDELTRERLEFTLRVIRGEP
Ga0193751_122237323300019888SoilITGADVPPPPRAAALLRKDELTAERLEFTIRGVIRSAP
Ga0197907_1066876513300020069Corn, Switchgrass And Miscanthus RhizosphereGMDGSALLARLPATVPAIIVTGADVTPPPRAAAMLRKDELTRERLEFTLRVIRGEP
Ga0210403_1088414823300020580SoilMDGAALLARLPVSVPAIVVTGADVPAPPRAAAVLRKDELTRERLEFTLRGIIRGPS
Ga0210399_1052195923300020581SoilAIIITGADTPPPPRAAALLKKDELTRERLEFTIRGIIRSSP
Ga0210399_1137707813300020581SoilSVPAIIVTGADVPPPPRAAAMLRKDELTRERLEFTLRGIIRSPS
Ga0210400_1149363813300021170SoilSRLPASIPAILVTGADVPLPARASAMLRKDELTRERLEFTIRGVIRSPS
Ga0210388_1136697423300021181SoilVITGADAPPPPGAAAMLRKDELTRERLEFTIRGVLGGAR
Ga0213881_1046930013300021374Exposed RockTVIITGADVPTPPRAGALLRKDELTRERLEFAIRGILREAA
Ga0210385_1076857223300021402SoilPAIVITGHDEPPPPRAAALLRKDELTRERLAFTIRRVIRGTR
Ga0210387_1077258513300021405SoilVPAIIITGADTPPPPRAAALLKKDELTRERLEFTIRGIIRSSS
Ga0210384_1091113623300021432SoilRLPVSVPAIVVTGADVPPPPRAAAVLRKDELTRERLEFTLRGIIRGPS
Ga0210410_1058712213300021479SoilLARLPVSVPAIVVTGADVPPPPRAAAVLRKDELTRERLEFTLRGIIRGPS
Ga0210409_1028219113300021559SoilPGMDGTALLARLPVLVPAIVVTGADVPAPPRAAAVLRKDELTRERLEFTLRGIIRGPS
Ga0126371_1098512723300021560Tropical Forest SoilLARLPAPVSAIVVTAADAPPPPRAAAVLRKDELTRERLEFTLRAVIRSEP
Ga0247664_104398223300024232SoilPATVPAIIVTGADVTPPPRAAAMLRKDELTRERLEFTLRVIRGEP
Ga0247666_104425523300024323SoilGADVTPLPRAAAMLRKDELTRERLEFTLRVIRGEP
Ga0209171_1031095723300025320Iron-Sulfur Acid SpringVPAILVTSADVPAPARAAAMLRKDELTRERLEFTIRGVFRSPS
Ga0207663_1066129523300025916Corn, Switchgrass And Miscanthus RhizosphereGGALLARLPAEVPAIVITSADLRPPPRAAALLRKDELTAERLEFTIRAVIGRPS
Ga0207664_1123343523300025929Agricultural SoilPAAVPAIIITSADLRPPPRAAALLRKDELTAERLEFTIRAVIGRPS
Ga0207664_1132353623300025929Agricultural SoilTSADLRPPPRAAALLRKDELTAERLEFTIRAVIGGPS
Ga0207664_1200208213300025929Agricultural SoilIVTGADVPAPTRAAAVLRKDELTRERLEFTLRGIIRSPS
Ga0257156_110878223300026498SoilMDGGALLARLPAAVPAIVVTGADVPPPPRAAAVLRKDELTRERLEFTLRGIFRGPS
Ga0209577_1047419413300026552SoilMPGMDGSALLARLPATVPAIIVTGADVLPPPRAAAMLRKDELTRERLEFTLRGIIRSPS
Ga0208240_102095223300027030Forest SoilASVPAIIITGADVPPPPRAAALLRKDELTRERLEFTIRGVIRGAP
Ga0208730_101831923300027047Forest SoilLPASIPAILVTGADVPLPARASAMLRKDELTRERLEFTIRGVIRSPS
Ga0209327_104727623300027307Forest SoilSVPAIIVTGADVPPPPRAAAVLRKDELTRERLEFTLRGVIRGEP
Ga0209010_109820213300027370Forest SoilARLPVAIPAIIITGADAPAPPGAAALLRKDELTRERLEFTIRGVLGGAR
Ga0209114_100624823300027504Forest SoilIITGTDMAAPPRAAALLRKDQLTSERLEFTLRGIFGRTQ
Ga0209177_1000299013300027775Agricultural SoilGGALLARLPASVPAIIVTGADVAPPPRAAAMLRKDELTRERLEFTLRVIRGEP
Ga0209074_1012090513300027787Agricultural SoilTVPAIIVTGADVTPPPRAAAMLRKDELTRDRLEFTLRVIRGEP
Ga0209074_1019193913300027787Agricultural SoilLPAIIVTGADVPLPPRAAAVLRKDELTRNRLEFTLRGVVREAS
Ga0209773_1038023513300027829Bog Forest SoilAELPRPPRAAALLRKDELTAERLEFTIRGVIRGVSRGAP
Ga0209274_1004856333300027853SoilPAAIPAIVITGADAPPPPGAAALLRKDELTRERLEFTIRGVLGGAR
Ga0209624_1088943213300027895Forest SoilGGTLLSRLPAALPAILVTGADVPLPARAAALLRKDELTRERLEFTIRAVISSSGRPR
Ga0308309_1038245513300028906SoilLPASVPAILVTSADVPAPARAAAMLRKDELTRERLEFTIRGVIRSPS
Ga0308309_1040683913300028906SoilADVPPPARAAAMLRKDELTRERLEFTLRGIIRSPS
Ga0308309_1179162823300028906SoilIITGADVLPPPRAAALLRKDELTRERLEFTIRGIIRGAS
Ga0222749_1070381713300029636SoilAIVVTGADVPPPPRAAAVLRKDELTRERLEFTLRGIIRGPS
Ga0311340_1023808123300029943PalsaASIPAILVTGADVAPPARASAMLRKDELTRDRLEFTIRGVIRSP
Ga0311354_1029342523300030618PalsaSADVALPARAAAMLRKDELTRERLEFTIRGVIRSS
Ga0170824_10009046423300031231Forest SoilSVPAIVVTGADVPAPPRAAAVLRKDELTRERLEFTLRRVIRGPS
Ga0170824_10591120613300031231Forest SoilAIVITGHDEPTPPRAAALLRKDELTRERLAFTIRRVIRGTR
Ga0170824_12800730523300031231Forest SoilLARLPASVPAIIVTGADVPPPPRAAAMLRKDELTRERLEFTLRGIIRSPS
Ga0302324_10063472313300031236PalsaLPASVPAIIITGADAPRPPRAAALLHKDELTRERLEFTIRAVLRRAR
Ga0318516_1015584313300031543SoilIVVTGADGPPPPRAAAVLRKDELTRERLEFTLRAVIREER
Ga0318571_1003455723300031549SoilLLARLPASVPAIVVTGADEPAPPRAAAVLRKDELTRERLEFTLRVVIRGES
Ga0318515_1016334923300031572SoilMDGTALLARLPASVPAIIVTGADGPAPPRAAAVLRKDELTRERLEFTLRVVIRGES
Ga0310915_1089173413300031573SoilVVTGADVPPPSRASGVLRKDELTRERLEFALRGVIRGEP
Ga0318496_1009845113300031713SoilLLARLPAPVPAIVVTGADGPPLPRAAAVLRKDELTRERLEFTLRAVIREER
Ga0307474_1035754213300031718Hardwood Forest SoilPAIIVTGADVAPPPRAAAMLRKDELTRDRLEFTLRGIIRSPS
Ga0306917_1121488123300031719SoilLLARLPAQVPAIVVTGADVPPPSRASGVLRKDELTRERLEFALRGVIRGEP
Ga0307469_1067834013300031720Hardwood Forest SoilMRMPGMDGSALLARLPASVPVIIVTGADVLPPPRAAAMLRKDELTRERLEFTLRRIIRSP
Ga0318493_1004952613300031723SoilMDGTALLARLPAQVPAIVVTGADVPPPSRASGVLRKDELTRERLEFALRGVIRGEP
Ga0318493_1040500913300031723SoilLARLPASVPAIIVTGADEPAPPRAAAVLRKDELTRERLEFTLRVVIRGES
Ga0318493_1082126023300031723SoilLARLPATVPAIIITGADVPSPPRAAALLRKDELTRERLEFTIRGVIGGTA
Ga0318501_1018014423300031736SoilRLPAQVPAIVVTGADVPPPSRASGVLRKDELTRERLEFALRGVIRGEP
Ga0307475_1067348523300031754Hardwood Forest SoilLVTGADVPVPARAAAMLRKDELTRERLEFTIRGVIRSPR
Ga0307475_1145443123300031754Hardwood Forest SoilALLARLPASVPAIIVTGADVSPPPRAAALIRKDELTRERLEFTLRRIIRSPS
Ga0318521_1004322113300031770SoilDGTALLARLPAQVPAIVVTGADVPPPSRASGVLRKDELTRERLEFALRGVIRGEP
Ga0318521_1016209213300031770SoilPCAARPPRAAAVLRKDELTRERLEFTLRAVIREEP
Ga0306919_1091559423300031879SoilTALLARLPASVPAIIVTGADEPAPPRAAAVLRKDELTRERLEFTLRVVIRGES
Ga0306923_1134437323300031910SoilLPAQVPAIVVTGADGPPPPRAAAVLRKDELTRERLEFTLRAVIREER
Ga0306921_1256227323300031912SoilLARLPAPVPAIVVTGADGPPPPRAAAELRKDELTRERLEFTLRAVIREKR
Ga0308175_10139367123300031938SoilLPVALPAIIVTGADVPAPPRAAAVLRKDELTRDRLEFTLRGVIREAS
Ga0308175_10147263023300031938SoilITSADLRPPARAAALLRKDELTSERLEFTIRAVIGGPS
Ga0308175_10206534013300031938SoilALLARLPAAVPAIIVTGADVPPPARAAAVLRKDELTRDRLEFTLRVIRGER
Ga0307479_1116338613300031962Hardwood Forest SoilVPAIVITALDGQPPAPAAAQLRKDELTRERLAFTIRAIKEDG
Ga0318563_1042953223300032009SoilPCAARPPRAAAVLRKDELTRERLEFTLRAVIREER
Ga0311301_1072734043300032160Peatlands SoilMRMPGMDGDTLLARLPASVPAIIVTGADGPAPPRAAALLRKDELTRERLKFTIRGVIRGR
Ga0307470_1019221223300032174Hardwood Forest SoilLARLPATVPAIIVTGADVTPPPRAAAVLRKDELTRERLEFTLRGIIRSPS
Ga0307471_10104498623300032180Hardwood Forest SoilGMDGRALLARLPASVPAIIVTGADVPPPPRAAAVLRKDELTRERLEFTLRGIIRSPS
Ga0307472_10191268013300032205Hardwood Forest SoilVDGAALLARLPGPVPAIVVTGADVPPPPRAAAVLRKDELTRERLEFTLRGVIRGEP
Ga0335085_1057815523300032770SoilAIVVTGADVPPLPRAAAVLRKDELTRERLEFTLRCVIRGPS
Ga0335082_1054973613300032782SoilLPASVPAIIVTGADVPPPPRAAAVLRKDELTRERLEFTLRVALRGEP
Ga0335080_1142724323300032828SoilRLPGSLPAIVVTGADVPPPRAAAVLRKDELTRERLEFTIRAAVRDEK
Ga0335070_1030970323300032829SoilIVLTGADGPPLPRAAAVLRKDELTRERLEFTLRAVIREER
Ga0335074_1049222323300032895SoilGADAPPPPGAAALLRKDELTRERLEFTIRDVLGGGAG
Ga0335075_1133054923300032896SoilARLPAALPAVIITSADVRPPARAAALLRKDELTRERLEFTLRGVLREAP
Ga0335071_1100109113300032897SoilSVPAIVVTGADVPPPPRAAAVLQKDELTRERLEFTLRGVIRDES
Ga0335072_1104563923300032898SoilTTRDRPQRADALLRKDELTRERLAFTIRRVLREGR
Ga0335077_1096728113300033158SoilRLPATIPAIIVTGADAPPPPGAAALLRKDELTRERLEFTIRNVLGGATR
Ga0335077_1151530623300033158SoilTGADVPAPARAAALLRKDELTRERLEFAIRAAIWGKA
Ga0310810_1141495213300033412SoilVPAIIVTGADVRPPPRAAAVLRKDELTRDRLEFTLRGIIRSPS
Ga0334854_091994_1_1323300033829SoilSIPAILVTGADVAPPARASAMLRKDELTRDRLEFTIRGVIRSS
Ga0370483_0268950_1_1923300034124Untreated Peat SoilMPGLDGNALLARLPASLPAIVITGADLPPPPRAAAVLRKDELTAERLEFTIRAVLRGDPRGAR
Ga0370515_0143320_872_10243300034163Untreated Peat SoilLTQLPVSLPAIVITGADVPPLPRAGAVLRKDELTAERLEFTIRAVLRGTR
Ga0373950_0039036_784_9033300034818Rhizosphere SoilIIVTGADVTPPPRAAAMLRKDELTRERLEFTLRVIRGEP


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