NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F059385

Metagenome / Metatranscriptome Family F059385

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F059385
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 64 residues
Representative Sequence MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Number of Associated Samples 107
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 13.43 %
% of genes near scaffold ends (potentially truncated) 22.39 %
% of genes from short scaffolds (< 2000 bps) 82.84 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (69.403 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(12.687 % of family members)
Environment Ontology (ENVO) Unclassified
(54.478 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(56.716 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88
1INPhiseqgaiiFebDRAFT_1014107622
2JGIcombinedJ26739_1005886674
3Ga0062389_1016947202
4Ga0070658_109188041
5Ga0070676_112746712
6Ga0070666_111448141
7Ga0068868_1000084574
8Ga0070660_1004516122
9Ga0070671_1003406292
10Ga0070659_1003466902
11Ga0070667_1004646301
12Ga0070711_1012360252
13Ga0070734_100103454
14Ga0070735_103211812
15Ga0070730_106883882
16Ga0070731_108609502
17Ga0068853_1003401792
18Ga0070733_100134603
19Ga0070733_101730503
20Ga0068852_1002386052
21Ga0068859_1019318042
22Ga0074470_111603663
23Ga0068858_1000431705
24Ga0068860_1004799572
25Ga0066652_1007398782
26Ga0066652_1015639822
27Ga0075026_1006890242
28Ga0075017_1001496302
29Ga0075030_1015254792
30Ga0070715_107648622
31Ga0070716_1013615562
32Ga0097621_1000384335
33Ga0097621_1003718252
34Ga0097621_1004975862
35Ga0075021_108430601
36Ga0068871_1012582282
37Ga0075435_1016619291
38Ga0099795_104255412
39Ga0099830_104711172
40Ga0099828_103079212
41Ga0099828_119361152
42Ga0105245_100621353
43Ga0105245_100788581
44Ga0105245_102245322
45Ga0105247_101668763
46Ga0105247_107669261
47Ga0105247_112202312
48Ga0099792_111442741
49Ga0105243_101270813
50Ga0075423_116433712
51Ga0105241_104320953
52Ga0105248_100502212
53Ga0105248_115690101
54Ga0074045_109391651
55Ga0134125_128487301
56Ga0105239_111649572
57Ga0136449_1001470269
58Ga0136449_1002030181
59Ga0134127_131193281
60Ga0150983_111451593
61Ga0137392_103036702
62Ga0137391_106606781
63Ga0137393_102848321
64Ga0137393_113142022
65Ga0137389_100998284
66Ga0137388_103630932
67Ga0137388_116106593
68Ga0137390_112316171
69Ga0137395_111564762
70Ga0137407_112788612
71Ga0157378_103619922
72Ga0157378_104126362
73Ga0120123_11810681
74Ga0182024_1006690810
75Ga0157377_114255591
76Ga0167649_10051610
77Ga0167658_10191072
78Ga0132258_119093621
79Ga0210407_106963322
80Ga0210403_103700171
81Ga0210405_102502272
82Ga0210408_101004273
83Ga0210384_101800132
84Ga0210384_103668932
85Ga0210384_105351302
86Ga0207656_100869322
87Ga0207710_103804272
88Ga0207680_108155151
89Ga0207699_111403512
90Ga0207654_100982522
91Ga0207654_101041721
92Ga0207654_102606721
93Ga0207654_105268101
94Ga0207695_108024082
95Ga0207663_112508491
96Ga0207687_100322612
97Ga0207687_102926583
98Ga0207687_103611203
99Ga0207644_103372022
100Ga0207686_101331132
101Ga0207709_109735581
102Ga0207711_104952711
103Ga0207711_106566271
104Ga0207711_117341541
105Ga0207658_102344371
106Ga0207703_104885893
107Ga0207702_101513392
108Ga0209219_10103913
109Ga0209118_10569202
110Ga0209060_100114462
111Ga0209167_100084073
112Ga0209590_106010412
113Ga0209068_105497212
114Ga0209488_102309083
115Ga0222749_104621032
116Ga0170834_1003309641
117Ga0170823_161984073
118Ga0170824_1092156325
119Ga0170824_1122687992
120Ga0170824_1241111721
121Ga0170819_177930631
122Ga0310686_1159042842
123Ga0307474_102223502
124Ga0307469_113780191
125Ga0307468_1015069951
126Ga0307479_115701321
127Ga0311301_112184974
128Ga0311301_118533242
129Ga0307470_102442072
130Ga0307470_104287841
131Ga0307472_1000389153
132Ga0335085_101263003
133Ga0335080_103183351
134Ga0316620_118382921
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.58%    β-sheet: 24.73%    Coil/Unstructured: 52.69%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEGSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
69.4%30.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Bog Forest Soil
Sediment (Intertidal)
Watersheds
Soil
Vadose Zone Soil
Terrestrial Soil
Glacier Forefield Soil
Surface Soil
Peatlands Soil
Permafrost
Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Bog Forest Soil
Permafrost
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
3.7%12.7%6.0%3.0%6.0%4.5%5.2%3.0%3.7%3.0%3.0%3.0%6.7%6.7%5.2%4.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10141076223300000364SoilMKISKGTVSGEVEYIQNEDGSWSFRLTLDDDPVPIESDWTFASRELAEEHVNYTLDSAALRIAEG*
JGIcombinedJ26739_10058866743300002245Forest SoilMRIGNGEVEYTEHEDGTWSFKLMLEDDPVPIESMGNFPTKELAEEQVNYELEAASLRKAEG*
Ga0062389_10169472023300004092Bog Forest SoilMKISKGTVKGEVEYTQHGDGLWSFRLTRDDDPVPMESDSNFESNELAEEQLNYVMESAALRIAEG*
Ga0070658_1091880413300005327Corn RhizosphereMKITKGSVTGDVEYTQNEDGSWSFLLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSIALRIAEG*
Ga0070676_1127467123300005328Miscanthus RhizosphereMKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0070666_1114481413300005335Switchgrass RhizosphereGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0068868_10000845743300005338Miscanthus RhizosphereMKITKGSVTGDVEYTQNEDGSWSFLLTLDDNPVPIESDWTFPSRELAEEQVNYTLDSIALRIAEG*
Ga0070660_10045161223300005339Corn RhizosphereMKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVN
Ga0070671_10034062923300005355Switchgrass RhizosphereMKISKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVDFVLDSAALRIAEG*
Ga0070659_10034669023300005366Corn RhizosphereMKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEV*
Ga0070667_10046463013300005367Switchgrass RhizosphereMRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQMNYTLDSAALRIAEG*
Ga0070711_10123602523300005439Corn, Switchgrass And Miscanthus RhizosphereMKISKSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVMRIAEG*
Ga0070734_1001034543300005533Surface SoilMRITRGTASGDVEYTQNEDGSWSFRLAMDNDPVPIEGSDFASKELAEEQVNYALESAALRIAEG*
Ga0070735_1032118123300005534Surface SoilMRINKGTVFGEVEYTQNEDGSWSFRLTLDGDPIPIESDWTFASKELAEEQVNYT
Ga0070730_1068838823300005537Surface SoilMRINKGTVFGEVEYTQNEDGSWSFRLAVDDDPIPIESDWTFPSKELAEEQVNY
Ga0070731_1086095023300005538Surface SoilYIQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAVLRIAEG*
Ga0068853_10034017923300005539Corn RhizosphereMKISNGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0070733_1001346033300005541Surface SoilMKISKGTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYTLDSAALRIAEG*
Ga0070733_1017305033300005541Surface SoilMRINKGTVFGEVEYTQNEDGSWSFQLTLDDDLIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0068852_10023860523300005616Corn RhizosphereMKISKGAVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0068859_10193180423300005617Switchgrass RhizosphereMRINKGTVFGEIEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAA
Ga0074470_1116036633300005836Sediment (Intertidal)MRISKSNQSGDVEYTQHENGSWSFRLTLDDDPVPIENWDFPSKELAEEQVNYTLESAALRIAEG*
Ga0068858_10004317053300005842Switchgrass RhizosphereMRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0068860_10047995723300005843Switchgrass RhizosphereMKISKGTVFGEVEYIQNEDASWSFRLMLDDDPIVIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0066652_10073987823300006046SoilMKISKGTVFGEVEYTQNEDRSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0066652_10156398223300006046SoilMKISKGAVSGEVEYVQNEDGSWSFRLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSAALRIAEG*
Ga0075026_10068902423300006057WatershedsMKVNKGTIFGEVEYIQNEDGSWSFRLTLDDDPLPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0075017_10014963023300006059WatershedsMKISKGAIFGEVEYTQNDDGSWSFRLTLDDDPIPIESDWTFPSRELAEEQVNYTLESAALRIAEG*
Ga0075030_10152547923300006162WatershedsMKISKGAIFGEVEYTQNDDGSWSFRLTLDDDPIPIESDWTFPSKELAEEQVNYTLESAALRIAEG*
Ga0070715_1076486223300006163Corn, Switchgrass And Miscanthus RhizosphereMKISKGTVFGEVEYTQHEDRSWSFRLTLDDDPVPIESDWNFPSKELAEEQVHYTLDSAALRIAEG*
Ga0070716_10136155623300006173Corn, Switchgrass And Miscanthus RhizosphereMKISKSTVSGDVEYTQHEDGSWSFRLILDDDPVPIESDWKFPSKELAEEQVNYLLDSAVMRIAEG*
Ga0097621_10003843353300006237Miscanthus RhizosphereMKISKGTVFGEVEYIQNEDASWSFRLMLDDDPIAIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0097621_10037182523300006237Miscanthus RhizosphereMKISKGMVSGEIEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVNYELDAAALRIAEG*
Ga0097621_10049758623300006237Miscanthus RhizosphereMRINKGTVFGEVEYTQHEDGSWSFRLALDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0075021_1084306013300006354WatershedsMKGIVKVSKGTIFGEVEYTQNEDGSWSFRLMLDDDPIPIESDWTFPSKELAEEQVNYTLESAALRIAEG*
Ga0068871_10125822823300006358Miscanthus RhizosphereMRINKGTVFGEVEYTQHEDGSWSFRLALDDDPIPIESDWTFPSKELAEQQVNYTLDSAALRIAEG*
Ga0075435_10166192913300007076Populus RhizosphereMKISKGNVFGEVEYTQNKDGSWSFQLTLDEDPVPIESDWTFPSKELAEEQVNYMLDSAALRIAEG*
Ga0099795_1042554123300007788Vadose Zone SoilMKISKNTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWNFPSKELAEEQVHYTLDSAALRIAEG*
Ga0099830_1047111723300009088Vadose Zone SoilKISRSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKSPSKELAEEQVNYLLDSAVMRIAEG*
Ga0099828_1030792123300009089Vadose Zone SoilMKISRSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKSPSKELAEEQVNYLLDSAVLRIAEG*
Ga0099828_1193611523300009089Vadose Zone SoilGDVEYTQHEDGTWSFKLTLDGDPVPIESDWNFETKELAEEQVKYTLDSAALRKAEG*
Ga0105245_1006213533300009098Miscanthus RhizosphereMKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVNYALDSAALRIAEG*
Ga0105245_1007885813300009098Miscanthus RhizosphereMRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYT
Ga0105245_1022453223300009098Miscanthus RhizosphereMKISKGKVFGEVEYTQNEDGSWSFRLTLDDDPISIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0105247_1016687633300009101Switchgrass RhizosphereMRINKGTVFGEVEYTQNEDGSWSFRLTLDDDPISIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0105247_1076692613300009101Switchgrass RhizosphereMKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEHVNYALDSAALRIAEG*
Ga0105247_1122023123300009101Switchgrass RhizosphereMKISKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVDFVLDSAALRI
Ga0099792_1114427413300009143Vadose Zone SoilGDVEYTQHEDGSWSFRLTLDDDPVPIECDWNFPSKELAEEQVHYTLDSAALRIAEG*
Ga0105243_1012708133300009148Miscanthus RhizosphereMKISKGTVLGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0075423_1164337123300009162Populus RhizosphereMKISKGTVFAEVEYIQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0105241_1043209533300009174Corn RhizosphereMKISKGAVSGEVEYIQNEDGSWSFRLTLDDDPVPIENDWTFPSRELAEEHVNYTLDSAALRIAEG*
Ga0105248_1005022123300009177Switchgrass RhizosphereMRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIEEG*
Ga0105248_1156901013300009177Switchgrass RhizosphereYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0074045_1093916513300010341Bog Forest SoilMKISKGTVFGEVEYAQNEDGSWSFRLTLEDDPVPIESDWTFPSKELAEEQVNYTLDSFALRIAEG*
Ga0134125_1284873013300010371Terrestrial SoilMKISKGTVLGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEAQVNYTLDSVALRIAEG*
Ga0105239_1116495723300010375Corn RhizosphereMKISRSTVSGAVEYTQHQDGSWSFRLTLDDDPVPIESDWNFPTKELAEEQVNYVLDSAAMRIAEG*
Ga0136449_10014702693300010379Peatlands SoilMRISNGTVSGDVEYVQHKDGTWSFRLTLDDDPISIESDWNLATKELAQEQVNYAMDSAALRKAEG*
Ga0136449_10020301813300010379Peatlands SoilPMNISNGSVSGDVEYTEHEDGTWSFVLTLDGDPVPIESDWNFATKELAEEQVTYTLESAALRKAEG*
Ga0134127_1311932813300010399Terrestrial SoilMKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNY
Ga0150983_1114515933300011120Forest SoilSGDVEYVQHEDGTWSFRLTLEDDPVPVESDWNFTTKELAEEQVKYTLDSAALRKAEG*
Ga0137392_1030367023300011269Vadose Zone SoilMKIRKSTVSGDVECTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG*
Ga0137391_1066067813300011270Vadose Zone SoilMKISKSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKSPSKELAEEQVNYLLDSAVMRIAEG*
Ga0137393_1028483213300011271Vadose Zone SoilMKISKSIVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG*
Ga0137393_1131420223300011271Vadose Zone SoilMKPMNIDNGTVYGDVEYTLHEDGTWSFKLTLEGDPVPIESDWNFATKELAEEQVKYTLDSAALRKAEG*
Ga0137389_1009982843300012096Vadose Zone SoilMKISRSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG*
Ga0137388_1036309323300012189Vadose Zone SoilMTISRSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG*
Ga0137388_1161065933300012189Vadose Zone SoilPMNIDNGSVSGDVEYTQHEDGTWAFKLTLDGDPVPIESDWNFETKELAEEQVKYTLDSAALRKAEG*
Ga0137390_1123161713300012363Vadose Zone SoilMKISKSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG*
Ga0137395_1115647623300012917Vadose Zone SoilMKISKSTVSGDVECTQHEDGSWSFRLTLDDDPVPAESDWKFPCEELAEEQVNYTLDSAALRIAEG*
Ga0137407_1127886123300012930Vadose Zone SoilMKISKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVDFALDSAALRIAEG*
Ga0157378_1036199223300013297Miscanthus RhizosphereVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0157378_1041263623300013297Miscanthus RhizosphereMKISKGNVCGDVEYTQHQDGSWSFRLTLDGDPVPIESDWTFTSRELAEEQVNYTLDSAALRIAEG*
Ga0120123_118106813300013770PermafrostRQSVLDSLLGRPDPMKISKGTVFGEVEYTQNEDGSWSFRLTLDEDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0182024_10066908103300014501PermafrostMRISDGAVSGDVEYVQHEDGTWSFRLTLDDDPISIESDWNLATQGLAEEQVNYAMDSAALRKAEG*
Ga0157377_1142555913300014745Miscanthus RhizosphereMKITKGSVTGDVEYTQNEDGSWSFLLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSIA
Ga0167649_100516103300015063Glacier Forefield SoilMKISKGTVCGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0167658_101910723300015195Glacier Forefield SoilMKISRSTVSGDVEYIQHEDGSWSFRLTLDDDPVPIESDWNFPSKELAEEQVNYVLDSAALRIAEG*
Ga0132258_1190936213300015371Arabidopsis RhizosphereMRINKGTVFGEVEYTQNEDGSWAFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0210407_1069633223300020579SoilMRISKGTVFGEVEYTQNEDGSWSFWLTLDDDPIPIESDWTFPSKELAEEQVRYTLDSAALRIAEG
Ga0210403_1037001713300020580SoilMRISKGTVFGEVEYTQNEDGSWSFRLTLDDDPIPIESDWTFPSKEQAEEQVNYTLDSAALRIAEG
Ga0210405_1025022723300021171SoilMKISKSMVSGDVEYTQHEDGSWSFRLTLDGDPVPIESDWNFPSKELAEEQVNYLLDSAVLRIGEG
Ga0210408_1010042733300021178SoilMRISKGMVFGEVEYTQNEDGSWSFRLTLDDDPIPIESDWTFPSKELAEEQVRYTLDSAALRIAEG
Ga0210384_1018001323300021432SoilMKISKSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSQELAEEQVNYLLDSAVMRIAEG
Ga0210384_1036689323300021432SoilMKISKGAVSGEVEYIQNEDGSWSFWLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG
Ga0210384_1053513023300021432SoilMRISKSTVSGDVEYIQHEEGSWSFRLTLDDDPVPIESDWKFPSRELAEEQVNYLLDSAVLRIAEG
Ga0207656_1008693223300025321Corn RhizosphereMKITKGSVTGDVEYTQNEDGSWSFLLTLDDNPVPIESDWTFPSRELAEEQVNYTLDSIALRIAEG
Ga0207710_1038042723300025900Switchgrass RhizosphereMKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEHVNYALDSAALRIAEG
Ga0207680_1081551513300025903Switchgrass RhizosphereMKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0207699_1114035123300025906Corn, Switchgrass And Miscanthus RhizosphereMKISKGTVFGEVEYTQHEDRSWSFRLTLDDDPVPIESDWTFLSKELVEEQVNYTLDSVAL
Ga0207654_1009825223300025911Corn RhizosphereMKISKGTVFGEVEYIQNEDASWSFRLMLDDDPIAIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0207654_1010417213300025911Corn RhizosphereMKISKGTVLGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG
Ga0207654_1026067213300025911Corn RhizosphereMKISKGAVSGEVEYIQNEDGSWSFRLTLDDDPVPIENDWTFPSRELAEEHVNYTLDSAALRIAEG
Ga0207654_1052681013300025911Corn RhizosphereMRINKGTVFGEVEYTQHEDGSWSFRLALDDDPIPIESDWTFPSKELAEQQVNYTLDSAALRIAEG
Ga0207695_1080240823300025913Corn RhizosphereMKITKGSVTGDVEYTQNEDGSWSFLLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSIALRIAEG
Ga0207663_1125084913300025916Corn, Switchgrass And Miscanthus RhizosphereMKISKGTVFGEVEYTQHEDRSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG
Ga0207687_1003226123300025927Miscanthus RhizosphereMKISKGKVFGEVEYTQNEDGSWSFRLTLDDDPISIESDWTFPSKELAEEQVNYTLDSVALRIAEG
Ga0207687_1029265833300025927Miscanthus RhizosphereMKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVNYALDSAALRIAEG
Ga0207687_1036112033300025927Miscanthus RhizosphereMKISKGNVCGDVEYTQHQDGSWSFRLTLDGDPVPIESDWTFTSRELAEEQVNYTLDSAALRIAEG
Ga0207644_1033720223300025931Switchgrass RhizosphereMKISKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVDFVLDSAALRIAEG
Ga0207686_1013311323300025934Miscanthus RhizosphereMKISKGMVSGEIEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVNYELDAAALRIAEG
Ga0207709_1097355813300025935Miscanthus RhizosphereVKINKGMVSGEIEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVNYELDAAALRIAEG
Ga0207711_1049527113300025941Switchgrass RhizosphereYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0207711_1065662713300025941Switchgrass RhizosphereMRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIEEG
Ga0207711_1173415413300025941Switchgrass RhizosphereMKISKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVDFVLDS
Ga0207658_1023443713300025986Switchgrass RhizosphereMRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0207703_1048858933300026035Switchgrass RhizosphereMKITKGSVTGDVEYTQNEDGSWSFLLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSAALRIAEG
Ga0207702_1015133923300026078Corn RhizosphereMKISNGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0209219_101039133300027565Forest SoilMNISNGSVSGEVEYTQHEDGTWSFKLTLEGDPVSIESDWNFATRELAEEQVKYTLDSAALRIAEG
Ga0209118_105692023300027674Forest SoilMKISKSTVSGDVEYTQHENGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG
Ga0209060_1001144623300027826Surface SoilMRITRGTASGDVEYTQNEDGSWSFRLAMDNDPVPIEGSDFASKELAEEQVNYALESAALRIAEG
Ga0209167_1000840733300027867Surface SoilMKISKGTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYTLDSAALRIAEG
Ga0209590_1060104123300027882Vadose Zone SoilMKISKSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVMRIAEG
Ga0209068_1054972123300027894WatershedsMKGIVKVSKGTIFGEVEYTQNEDGSWSFRLMLDDDPIPIESDWTFPSKELAEEQVNYTLESAALRIAEG
Ga0209488_1023090833300027903Vadose Zone SoilMKISKNTVSGDVEYTQHEDGSWSFRLTLDDDPVPIECDWNFPSKELAEEQVHYTLDSAALRIAEG
Ga0222749_1046210323300029636SoilMNIDNGSVSGEVEYTQHEDGTWSFKLTLDGDPVPIESDWNFETKELAEEQVKYTLDSAALRKAEG
Ga0170834_10033096413300031057Forest SoilAEDPMKISKGAVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVRYVLDSAALRIAEG
Ga0170823_1619840733300031128Forest SoilEDPMKISKGAVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVRYVLDSAALRIAEG
Ga0170824_10921563253300031231Forest SoilVDVEYSQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYTLDSAALRIAEG
Ga0170824_11226879923300031231Forest SoilMKISKGTVSGEVEYIQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYALDSAALRIAEG
Ga0170824_12411117213300031231Forest SoilMKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDCPFPSKELAEEQVNYALDSAALRIAE
Ga0170819_1779306313300031469Forest SoilKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVNYLLDSAVMRIAE
Ga0310686_11590428423300031708SoilMKISKGTVLGDVEYTQNDDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG
Ga0307474_1022235023300031718Hardwood Forest SoilMRSAHIAASDRRALPMLLRLRPMNISNGSVSGEVEYTQHEDGTWSFTLTLDGDPVPIESDWNFATKELAEEQVNYTLDSAALRKAEG
Ga0307469_1137801913300031720Hardwood Forest SoilSNGSVSGDVEYTQHEDGTWSFKLTLDEDPVPIESDWNFATKELAEEQVKYTLDSAALRKAEG
Ga0307468_10150699513300031740Hardwood Forest SoilMKISKNTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSAALRIAEG
Ga0307479_1157013213300031962Hardwood Forest SoilMNIDNGSVSGDVEYSQHEDGTWSFKLTLDGDPVPIESDWNFETKELAEEQVKYTLDSAALRKAEG
Ga0311301_1121849743300032160Peatlands SoilLLRLIPMNISNGSVSGDVEYTEHEDGTWSFVLTLDGDPVPIESDWNFATKELAEEQVTYTLESAALRKAEG
Ga0311301_1185332423300032160Peatlands SoilMRISNGTVSGDVEYVQHKDGTWSFRLTLDDDPISIESDWNLATKELAQEQVNYAMDSAALRKAEG
Ga0307470_1024420723300032174Hardwood Forest SoilMRIGKGTVLGEVEYTQNEDGAWSFRLTLDDDPVPIESDWTFPSRELAEEQVNYTLDAAALRIAEG
Ga0307470_1042878413300032174Hardwood Forest SoilMRINKGTVFGEVEYTQNEDSSWSFRLALDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0307472_10003891533300032205Hardwood Forest SoilMKISKSTVSGDVEYTQHEDGSWSFRLTPDDDPVPIESDWKFSSKELAEEQVNYLLDSAVLRIAEG
Ga0335085_1012630033300032770SoilMRISHGSLSGDVEYTQHEDGTWSFQLTLDGDPTPIESDWNFPSKELAEEQLNYTLESAALRRAEG
Ga0335080_1031833513300032828SoilSLSGDVEYTQHEDGTWSFQLTLDGDPTPIESDWNFPSKELAEEQLNYTLESAALRRAEG
Ga0316620_1183829213300033480SoilMKISKGTVFGEVEYAQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.