NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F059239

Metagenome / Metatranscriptome Family F059239

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F059239
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 50 residues
Representative Sequence MRIPIESSTSYRGRNSRPNWLALLGFIGLALAAGALGAVFSPGTSARAAAW
Number of Associated Samples 112
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 69.47 %
% of genes near scaffold ends (potentially truncated) 69.40 %
% of genes from short scaffolds (< 2000 bps) 67.16 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (90.299 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.925 % of family members)
Environment Ontology (ENVO) Unclassified
(25.373 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.687 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 34.18%    β-sheet: 0.00%    Coil/Unstructured: 65.82%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF03109ABC1 14.18
PF03073TspO_MBR 2.24
PF04340DUF484 0.75
PF01209Ubie_methyltran 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG0661Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB familySignal transduction mechanisms [T] 14.18
COG3476Tryptophan-rich sensory protein TspO/CrtK (mitochondrial benzodiazepine receptor homolog)Signal transduction mechanisms [T] 2.24
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.75
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 0.75
COG3159Uncharacterized conserved protein YigA, DUF484 familyFunction unknown [S] 0.75


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A90.30 %
All OrganismsrootAll Organisms9.70 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_100249136Not Available1664Open in IMG/M
3300004080|Ga0062385_10543725Not Available724Open in IMG/M
3300004080|Ga0062385_11229993Not Available513Open in IMG/M
3300004082|Ga0062384_100606137Not Available742Open in IMG/M
3300004082|Ga0062384_100743279Not Available680Open in IMG/M
3300004091|Ga0062387_101122095Not Available611Open in IMG/M
3300004091|Ga0062387_101587540Not Available527Open in IMG/M
3300004092|Ga0062389_103484547Not Available590Open in IMG/M
3300004092|Ga0062389_103806785Not Available566Open in IMG/M
3300004092|Ga0062389_104650232Not Available517Open in IMG/M
3300004635|Ga0062388_100290497Not Available1358Open in IMG/M
3300005541|Ga0070733_11164169Not Available517Open in IMG/M
3300005591|Ga0070761_10831363All Organisms → cellular organisms → Bacteria → Proteobacteria582Open in IMG/M
3300005610|Ga0070763_10232173Not Available994Open in IMG/M
3300005610|Ga0070763_10347108Not Available825Open in IMG/M
3300005921|Ga0070766_10531899Not Available784Open in IMG/M
3300006174|Ga0075014_100278706Not Available874Open in IMG/M
3300009500|Ga0116229_10433487Not Available1094Open in IMG/M
3300009645|Ga0116106_1134656Not Available793Open in IMG/M
3300009683|Ga0116224_10390831Not Available662Open in IMG/M
3300009701|Ga0116228_10774645Not Available645Open in IMG/M
3300009709|Ga0116227_10874335Not Available677Open in IMG/M
3300009709|Ga0116227_11325094Not Available541Open in IMG/M
3300009824|Ga0116219_10210512Not Available1111Open in IMG/M
3300010339|Ga0074046_10646955Not Available623Open in IMG/M
3300010877|Ga0126356_10903485Not Available601Open in IMG/M
3300012924|Ga0137413_10183897Not Available1393Open in IMG/M
3300014158|Ga0181521_10391966Not Available686Open in IMG/M
3300014164|Ga0181532_10516928Not Available653Open in IMG/M
3300014499|Ga0182012_11023641Not Available518Open in IMG/M
3300014501|Ga0182024_11926054Not Available656Open in IMG/M
3300014502|Ga0182021_12179646All Organisms → cellular organisms → Bacteria → Proteobacteria667Open in IMG/M
3300014658|Ga0181519_10710996Not Available620Open in IMG/M
3300014838|Ga0182030_10387457Not Available1465Open in IMG/M
3300018085|Ga0187772_10024245All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3537Open in IMG/M
3300019886|Ga0193727_1188516Not Available524Open in IMG/M
3300019999|Ga0193718_1016634Not Available1630Open in IMG/M
3300020580|Ga0210403_10842533Not Available726Open in IMG/M
3300020580|Ga0210403_11293450Not Available557Open in IMG/M
3300020582|Ga0210395_10302679All Organisms → cellular organisms → Bacteria1202Open in IMG/M
3300020582|Ga0210395_10975633Not Available628Open in IMG/M
3300020582|Ga0210395_11101859Not Available586Open in IMG/M
3300020583|Ga0210401_11390461Not Available559Open in IMG/M
3300021180|Ga0210396_10194907Not Available1811Open in IMG/M
3300021181|Ga0210388_10199062Not Available1752Open in IMG/M
3300021402|Ga0210385_10353784Not Available1097Open in IMG/M
3300021403|Ga0210397_11199864Not Available590Open in IMG/M
3300021404|Ga0210389_11356047Not Available544Open in IMG/M
3300021405|Ga0210387_10735503Not Available873Open in IMG/M
3300021411|Ga0193709_1000290All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria19092Open in IMG/M
3300021420|Ga0210394_11399675Not Available595Open in IMG/M
3300021420|Ga0210394_11417500Not Available590Open in IMG/M
3300021475|Ga0210392_10916404Not Available656Open in IMG/M
3300021477|Ga0210398_10208306Not Available1593Open in IMG/M
3300021559|Ga0210409_11056734All Organisms → cellular organisms → Bacteria → Proteobacteria687Open in IMG/M
3300024181|Ga0247693_1069669Not Available525Open in IMG/M
3300026215|Ga0209849_1030069Not Available935Open in IMG/M
3300026557|Ga0179587_11147337Not Available511Open in IMG/M
3300026911|Ga0209620_1011304Not Available746Open in IMG/M
3300027002|Ga0209110_1026934Not Available685Open in IMG/M
3300027575|Ga0209525_1015921Not Available1829Open in IMG/M
3300027676|Ga0209333_1166771All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300027684|Ga0209626_1166538Not Available583Open in IMG/M
3300027855|Ga0209693_10277017Not Available820Open in IMG/M
3300027860|Ga0209611_10093258All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2057Open in IMG/M
3300027895|Ga0209624_10665606Not Available688Open in IMG/M
3300027905|Ga0209415_10783309Not Available667Open in IMG/M
3300027908|Ga0209006_10619478Not Available892Open in IMG/M
3300028565|Ga0302145_10278734All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria554Open in IMG/M
3300028781|Ga0302223_10183015Not Available692Open in IMG/M
3300028789|Ga0302232_10379469Not Available695Open in IMG/M
3300028806|Ga0302221_10556946Not Available500Open in IMG/M
3300028808|Ga0302228_10122939Not Available1206Open in IMG/M
3300029882|Ga0311368_10279158Not Available1276Open in IMG/M
3300029913|Ga0311362_10669231Not Available899Open in IMG/M
3300029917|Ga0311326_10495544Not Available597Open in IMG/M
3300029992|Ga0302276_10276254Not Available737Open in IMG/M
3300030399|Ga0311353_10929048Not Available733Open in IMG/M
3300030520|Ga0311372_12440624Not Available590Open in IMG/M
3300030617|Ga0311356_12068816Not Available502Open in IMG/M
3300030862|Ga0265753_1046157Not Available759Open in IMG/M
3300030878|Ga0265770_1079489Not Available639Open in IMG/M
3300031234|Ga0302325_12446231Not Available625Open in IMG/M
3300031236|Ga0302324_101099958Not Available1069Open in IMG/M
3300031258|Ga0302318_10624867Not Available544Open in IMG/M
3300031708|Ga0310686_103842124Not Available1348Open in IMG/M
3300031708|Ga0310686_110426205Not Available1005Open in IMG/M
3300031718|Ga0307474_10777844Not Available757Open in IMG/M
3300031823|Ga0307478_10056035All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2937Open in IMG/M
3300031837|Ga0302315_10746998Not Available510Open in IMG/M
3300031902|Ga0302322_102479555All Organisms → cellular organisms → Bacteria → Proteobacteria639Open in IMG/M
3300032805|Ga0335078_10758770Not Available1191Open in IMG/M
3300034124|Ga0370483_0225971Not Available639Open in IMG/M
3300034124|Ga0370483_0338327All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria521Open in IMG/M
3300034282|Ga0370492_0007206All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans4502Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.93%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa14.18%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil9.70%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.21%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.22%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog4.48%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated4.48%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.73%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.73%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.99%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.99%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.99%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil2.24%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog2.24%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.49%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.75%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.75%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.75%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.75%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.75%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.75%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.75%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.75%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.75%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.75%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.75%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009510Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009662Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009701Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014658Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021411Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2EnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300023101Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14EnvironmentalOpen in IMG/M
3300024181Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34EnvironmentalOpen in IMG/M
3300026215Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026911Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027002Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027313Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)EnvironmentalOpen in IMG/M
3300027574Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027692Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027698Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027860Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)Host-AssociatedOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028565Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3EnvironmentalOpen in IMG/M
3300028775Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2EnvironmentalOpen in IMG/M
3300028781Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300028860Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029913III_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029917I_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029992Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3EnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030878Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031837Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M
3300034282Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1071711923300001593Forest SoilMRIPVESPTSYRGRNARPNWVTLMLFLGLALGAGVLGFLFSPAH
JGIcombinedJ26739_10024913613300002245Forest SoilMRILIESSTSYRGRNSRPNWLLLAVFIGAALAAGALGALFSPRAS
Ga0062385_1025585423300004080Bog Forest SoilVKIRIETSMSYRGRNARPNWPALIGFTTLALAAGALGAIFSPGA
Ga0062385_1054372523300004080Bog Forest SoilMRIPVESSTSYRGRNSRPNWLALLGFAGLALAAGALGAIFAPGGSAKAAAWYALLAKP
Ga0062385_1122999323300004080Bog Forest SoilMRIPVESSTSYRGRNSRPNWLVLCIFLGLGFAADAIGAMFSHSARLGSAP
Ga0062384_10060613723300004082Bog Forest SoilVKIQVPSTTSYRGRNSRVNLPLLTAFVLVALGVGAVGAVFSPGFSP
Ga0062384_10074327923300004082Bog Forest SoilMRIPIESSTTYRGRNSRPNVPALLLFVGIALGVGVFAAAFSPLASAAAAQWYAVLAKPP
Ga0062387_10112209523300004091Bog Forest SoilMRIPIESSTSYRGRNSRPNLPALAFFLVLTLGAGVLGAWFSPGFSAPAAHWYATLVKPNWVLPQN
Ga0062387_10158754013300004091Bog Forest SoilMRIPIESSTSYRGRNSRPNLPALALFVGLALAVGALGAVFSPGLSKTAAQWYSML
Ga0062389_10348454723300004092Bog Forest SoilVRIPIESSTSFRGRNARPNWLALIAFIALALAAGAIGAVFSPARSPAAAVWYASLLK
Ga0062389_10380678523300004092Bog Forest SoilMRIPIDSATTYRGRNSRPNLPALVIFVGLALGAGVCAYLFSPAGSRAAAQWYAMLAKP
Ga0062389_10465023213300004092Bog Forest SoilMRIPIESSTSYRGRNSRPNLPALLVFVALALAVGAWGAVFSPGFS
Ga0062388_10029049723300004635Bog Forest SoilMRIPIESSTSYRGRNSRPNLPALLLSVVLALCAGAVAYRFSPFGSPEAARWYDMLVKADW
Ga0070733_1116416913300005541Surface SoilMRIPVESSTSYRGRNARPNLPILAAFIAAALAAGALGALFSPAVSASTRHWYALLAKPHWAPP
Ga0070761_1083136323300005591SoilMRIPIESSTSYRGRNSRPNLPVLALFLVLTLGAGAVGALFSPVFSASAAHWYLSLAKPNWLP
Ga0070762_1088176413300005602SoilMRIPVDSTTSYRGRNARPNWISLLGFIAAAGAAGALGFL
Ga0070763_1023217313300005610SoilVRIPVESSTSYRGRNARPNWLALIAFIALALAAGAIGAVFSPARSP
Ga0070763_1034710823300005610SoilMRIPVDSTTSYRGRNARPNWISLLGFIAAAGAAGALGFLVSPARSAA
Ga0070766_1053189913300005921SoilMRIHIDSTTSYRGRNSRPNWLALAVFIGVALSAGAAGAIFSPGGSAR
Ga0075014_10027870613300006174WatershedsMRIPIESATSYRGRNSRPNLPALTLFVGLSLAAGVFAYLYSPAGSAAAAQWYATLLKPSWQPPQTWF
Ga0116229_1043348723300009500Host-AssociatedLRIPIGGSTSYRGRNARPNWLALLIFIGLALAAGAVGAVFSPGLSAATDHWYALLAKPEWSPPN
Ga0116230_1001176213300009510Host-AssociatedMRIQVDSSTSYRGRNARPNWVALFVFIVVALASGAVGALFSPGV
Ga0116220_1026929613300009525Peatlands SoilVKIRIETSTSYRGRNARPNWLVLIGFVALALAAGALG
Ga0116106_113465613300009645PeatlandMRIPIESSTSYRGRNSRPNWLALLGFIGLALAAGALGAVFSPGTSARAAAW
Ga0105856_128142113300009662Permafrost SoilMRIPIESSTSYRGRNSRPQLHVLAAFIGAALAAGALNA
Ga0116224_1039083123300009683Peatlands SoilMRIPVESSTSYRGRNSRPNWLALLGFVGLALAAGALGAIFAPGGSAKAAAWYALLAKP
Ga0116228_1077464523300009701Host-AssociatedMRIPIESSTSYRGRNARPNWASLVGFIALALGSGAIGLPFSPLRSAAAAAWYASLSKPAWVI
Ga0116227_1087433523300009709Host-AssociatedLRIPIGGATSYRGRNARPNWLALLCFIGLALAAGAIGAVFSPGLSAAHDHWYAMLAKPGWSPP
Ga0116227_1132509413300009709Host-AssociatedMKIHIESSTTYRGRNSRPNLPALAVFLLLALGVGAVGAVFSPGISASAT
Ga0116219_1021051223300009824Peatlands SoilVKIRIETSTSYRGRNARPNWLVLIGFVALALAAGALGALFSPGGSAGTGAWYATLSKPAW
Ga0074046_1064695523300010339Bog Forest SoilMRIPVESSTSYRGRNSRPNWLALLSFVGLAFAAGASGAFFSPGGSARAAAWYALLAQPAWTPH
Ga0126356_1090348513300010877Boreal Forest SoilMRIPIESSTSYRGRNSRPNLPVLALFVLLALGVGALGAVFSPGVSAAATRW
Ga0137363_1141011313300012202Vadose Zone SoilMRIPIEGSTSYRGRNSRPNLPALALFVVLALGVGALGS
Ga0137398_1024145723300012683Vadose Zone SoilMRIPIEGSTSYRGRNSRPNLPALALFVVLALGVGALGAL
Ga0137413_1018389723300012924Vadose Zone SoilMRIPIEGSTSYRGRNSRPNLPALTLFVLLALGVGALGAVFSPGISASATQWYAALA
Ga0137416_1165417323300012927Vadose Zone SoilMKIPVGSSTSYRGRNYRPNWLALAGFVALALAVGLLG
Ga0181521_1039196623300014158BogMRIPIENPTSYRGRNARPNWVTLMLFVGIALGAGALGFLFSPAHSPATAQWYAGLAKPPWIAPSRWF
Ga0181532_1051692813300014164BogVKIRIETSMSYRGRNARPNWPALIGFTTLALAAGALGAIFSPGASAGAG
Ga0181534_1027868213300014168BogMRIPVESTTSYRGRNARPNWIALLGFIAVAGLAGA
Ga0182016_1063323813300014493BogMRIPVENTTSYRGRNARPNWIALLGFIASAIAAGALGELVSPA
Ga0182012_1102364123300014499BogVRIPIETSTSYRGRNSRPNWLALLVFLPLALSAGAVGAGFSPAFSPASAA
Ga0182024_1192605413300014501PermafrostMRIPVESATSYRGRNSRPNLPALAVLVLLALTAGVLGYLFSPASSP
Ga0182021_1217964613300014502FenMRIPIESSTSYRGRNARPNWLLLAAFIGSALAAGALGALFSPAVSTAARHWYAALAKPGW
Ga0181519_1071099613300014658BogMRIPVENTTSYRGRNARPNWIALLGFVASAIAAGALGALVSPARSAAIGAWYAGLSKP
Ga0182030_1038745723300014838BogMRIPIEGATSYRGRNSRPNWLILAAFIAAALAAGAVGAVFSPGVSAQANHWYALLAKP
Ga0187879_1047738513300017946PeatlandMRIPIENPTSYRGRNARPNWVTLMLFVGIALGAGALGFLFS
Ga0187863_1038658823300018034PeatlandMRIEIQGPTSYRGRNARPNWLALLASIVIALAAGALGAV
Ga0187863_1074425013300018034PeatlandVRIPIESSTSYRGRNARPNWIALVAFVGLSLAAGAVGALFS
Ga0187855_1048295823300018038PeatlandMRIPVESSTSYRGRNSRPNWLALLGFVGLAFAAGALGAFF
Ga0187859_1085269523300018047PeatlandMRIPIENPTSYRGRNARPNWVTLMLFIGVALGAGAIGFLF
Ga0187772_1002424553300018085Tropical PeatlandVRIPIESSTSYRGRNARPNWLALIAFVVLALAAGVVGAVFSPA
Ga0193727_118851623300019886SoilMRIPIEGSTSYRGRNSRPNLPALTLFVLLALGVGALGAVFSPGISASATQWYAALAKP
Ga0193718_101663423300019999SoilMRIPIEGSTSYRGRNSRPNLPALTLFVLLALGVGALGAVFSPGISASATQWYAALAKPEWLP
Ga0210403_1084253323300020580SoilMRIPIESSTSYRGRNSGPNLSALALFLVLSLSVGAVGALFSPAFSASAAHWYLGLVKPDWLPPQKWF
Ga0210403_1129345013300020580SoilMRIPIESSTSYRGRNSRPNLPALTLFVALALGVGALGAVFSPGVSASATRW
Ga0210395_1030267923300020582SoilMRIPIESATTYRGRNSRPNLPALLVFVGLALGVGVFAAAFTPAASAAAAQWYALLVKLCI
Ga0210395_1097563313300020582SoilMRIPIESSTSYRGRNSRPNLPALAAFLVLALGAGAVGALFSPGFSASAAHWYAALVKPDWLPPQ
Ga0210395_1110185913300020582SoilMRIPIESSTSYRGRNSRPNLPALAAFLVLSLCAGAVGALFSPGFSAPAAHWYAALAKPDWVPAQ
Ga0210401_1139046123300020583SoilMRIHIDSTTSYRGRNSRPNWLALAVFIGLAFSAGALGAIFSPGGSARAAEWYAMLL
Ga0210396_1019490713300021180SoilMRIPVESPTSYRGRNARPNWVTLMLFLGLALGAGALGFLFSPAHSPAAAHWYTGLAKPPWTAPG
Ga0210388_1019906223300021181SoilMRIPVESPTSYRGRNARPNWVTLMLFLGLALGAGVLGFLFSPAHSAAAAHWYTGLA
Ga0210385_1035378413300021402SoilMRIPIESATTYRGRNSRPNLPALALFVGLALGVGVFAYLFSPAGSGAAARW
Ga0210385_1073508213300021402SoilMRIPIDSGTSFRGRNSRPNWLVLTAFIGAALAAGAFAAF
Ga0210397_1119986413300021403SoilMKIRIDSSTSYRGRNSRPNLPVLGFFLLLALGVAAVGAVFSPGLSASATQWYAAL
Ga0210389_1135604713300021404SoilVRIPVESSTSYRGRNARPNWLALIAFVALAFAAGAIGAVFSPARSPAAGVW
Ga0210387_1073550323300021405SoilMRIPVESSTSYRGRNARPNWLILAAFIAAAFGAGALGALFSPAVSSSARHW
Ga0193709_100029013300021411SoilMRIPIEGSTSYRGRNSRPNLPALTLFVLLALGVGALGAVFSPGISASATQWYAALAKPGWLP
Ga0210394_1139967513300021420SoilVRIPVESSTSYRGRNARPNWLALIAFIALALAAGAIGAVFSPARSPAAAVWYASLFKPSWIAPS
Ga0210394_1141750013300021420SoilMRIPIESATSYRGRNSRPNLPALTLFVALALGVGALGAVFSPSVSASA
Ga0210391_1129252723300021433SoilMRIPIESSTSYRGRNSRPNLPALAVFLVLTLGAGVGGAL
Ga0210392_1091640413300021475SoilVKIQIPPTTHHRGRNSRLNLPALTAFVLVALGVGAVGAMFSPGFSPAAMQWY
Ga0210398_1020830613300021477SoilMRIPIESSTSYRGRNSRPNLPALAFFLVVTLSAGVAGAWFSPGF
Ga0210409_1105673413300021559SoilVRIPIESSTSYRGRNSRPNWLILAASIGTAFAAGALGAVFSPRMSAAAAQWYA
Ga0224557_116493413300023101SoilMRIPIESSTSYRGRNSRPNLPALALLVILALGVGALGAVFSP
Ga0247693_106966913300024181SoilMRIPIESATSYRGRNSRPNWLVLAAFVGGALAAGAIGAAFSPAASS
Ga0209849_103006923300026215SoilMRIQIESSTSYRGRNARPNWVILAAFIAGALLAGAIGAVFSPGVSAAANHWYAMLAK
Ga0179587_1114733723300026557Vadose Zone SoilMRILVESSTSYRGRNSRPNWLILAAFIGSALAAGALNAVFSPRMSTAANHWYA
Ga0209620_101130413300026911Forest SoilMKIRIESSTSYRGRNSRPNLPALSVFLLLALGVGAVGAVFSPGLSVVAAHWYAA
Ga0209110_102693413300027002Forest SoilMKIRIESSTSYRGRNSRPNLPALSVFLLLALGVGAVGAVFSPGLSVV
Ga0207780_108472413300027313Tropical Forest SoilMRIPIEGTTSYRGRNSRTNWVAMAGWVALALGAGALAAA
Ga0208982_101915913300027574Forest SoilMRIPIESSTSYRGRNSRPNLPALMLFVVLALCVGALGAVFSPG
Ga0209525_101592123300027575Forest SoilMRILIESSTSYRGRNSRPNWLLLAVFIGAALAAGALGALFSPRASTAAG
Ga0209333_116677123300027676Forest SoilMRIPVESPTSYRGRNARPNWLALMLFLGLALGAGAIGFLFSPVHSPDAAHWYAGLAKP
Ga0209626_116653823300027684Forest SoilMRIPIESSTSYRGRNSRPNLPALTLFVVTALGVGALGAAFSPGIS
Ga0209530_115503023300027692Forest SoilMRILIESSTSYRGRNSRPNWLLLSVSIGAALAAGA
Ga0209446_112340023300027698Bog Forest SoilMSYRGRNARPNWPALIGFTTLALAAGALGAIFSPGA
Ga0209447_1004865813300027701Bog Forest SoilVTQRMRIPIESATTYRGRNSRPNLPALVLFVGIAL
Ga0209693_1027701723300027855SoilMRIPVDSTTSYRGRNARPNWISLLGFIAAAGAAGALGFLVSPARSAAIGAWY
Ga0209611_1009325813300027860Host-AssociatedMRIPVESPTSYRGRNSRPNLPVLALSVALALAVELMAYLFSPAASP
Ga0209275_1022440023300027884SoilMRIPVDSTTSYRGRNARPNWISLLGFIAAAGAAGALGFLA
Ga0209624_1066560613300027895Forest SoilVRIPVESSTSYRGRNARPNWLALIAFVALALAAGVIGAVFSPARSPAAA
Ga0209415_1078330913300027905Peatlands SoilMRIQIESPTSYRGRNARPNWLVLLAFIVLALAAGALGAIFSPRVATP
Ga0209006_1061947823300027908Forest SoilMRIPIESSTSYRGRNSRPNWLLLAVSMGAALAAGALGAVFSQRAAA
Ga0302145_1027873423300028565BogVRIPIDSATSYRGRNARPNWLILATFIAAALAAGAVGAVFSPALSAEANHWYA
Ga0302231_1013511113300028775PalsaMRIPIESSTSYRGRNSRPNWLVFAAFVGLTLVIGAF
Ga0302223_1010488013300028781PalsaMRIPIESSTSYRGRNSRPNWLVFAAFVGLTLVIGAFGASL
Ga0302223_1018301523300028781PalsaMRIPIENPTSYRGRNARPNWATLGLFVGVAFGAGAIGFLFSPAHSPAAAQWYAGLAKPP
Ga0302232_1037946923300028789PalsaMRILIESSTSYRGRNSRPNWLLLSASIAAALAAGALGAILSPRLSSSA
Ga0302221_1055694613300028806PalsaMRIPIESSTSYRGRNSRPNWLVFAAFVGLTLVIGAFGASLSPRVSAAAAGWYTHLSK
Ga0302228_1012293923300028808PalsaMRIPIEGSTTYRGRNSRPNLPALVAFVGVAFCVGALGAVFSPGVSKSAAQ
Ga0302199_119060813300028860BogMRIPIEGATSYRGRNSRPNWLILAAFIAAALAAGAVGAVFS
Ga0308309_1091259523300028906SoilMRIPIESSTSYRGRNSGPNLPALALFLVLSLSVGA
Ga0311368_1027915823300029882PalsaMRIPVDNRTSYRGRNARPNWATLGLFVGVALGAGAIGFLFSPAHSPAAAQWYGGLA
Ga0311362_1066923113300029913BogMRIPVENTTSYRGRNARPNWIALLGFVASAIAAGALGALVSPARSAAIGAWYA
Ga0311326_1049554413300029917BogMKIVIENSTSYRGRNARPNWLALLAFIALALAAGAIGLFFSPARS
Ga0302276_1027625413300029992BogMRIPVENTTSYRGRNARPNWIALLGFIATAAAAGALGALVSPARSAAI
Ga0302181_1027779823300030056PalsaMRIPIESSTSYRGRNSRPNLPALAVFLVLTLAAGV
Ga0311353_1092904813300030399PalsaMRIPIESSTSYRGRNSRPNLPALAVFLVLTLAAGVAGALFSPGFSSSAARWYAALAKPDWVP
Ga0311372_1031529713300030520PalsaMRIPIEGSTTYRGRNSRPNLPALVAFVGVAFCVGA
Ga0311372_1120536813300030520PalsaMRIPIESSTSYRGRNSRPNWLVFSAFVGLTLIIGAFGASLS
Ga0311372_1244062413300030520PalsaMRIPIESSTSYRGRNSRPNLPALAGFVGLALAVGLLGAVFSPGLSASATTWYAMLAKPEWLPP
Ga0311356_1188800323300030617PalsaMRIPVESSTSYRGRNAKPNWVVLLLFMGIALGVGALGILFLPGPWY
Ga0311356_1206881623300030617PalsaVRIQIDSPTSYRGRNARPNWLTLLLFIGLALGAGALGFLFSPAHSPAAAHWYAGL
Ga0265753_104615723300030862SoilMRIPIESSTSYRGRNSRPNLPALALFLVLTLSAGVVGALFSPGFSAAAAHWYAAVVQPDWVPP
Ga0265770_107948913300030878SoilMRIPIESSTSYRGRNSRPNLPALALFLVLTLSAGVVGALFSPGFSAAA
Ga0170834_10542758723300031057Forest SoilMRIPIESSTSYRGRNSGLNLPALASFLVLALGVGALGAFRTKQK
Ga0170824_11403391913300031231Forest SoilVRILVESSTSYRGRNSRPNWLILAAFIGSALAAGAINTVF
Ga0302325_1120969013300031234PalsaMRIPIDNRTSYRGRNARPNWATLGLFVGVALGAGAIGFLFSPA
Ga0302325_1244623123300031234PalsaMRIPIDSPTSYRGRNARPNWIALMLFVGAALGAGAIGYLFSPAHSPAAAHWYVGLAKP
Ga0302324_10109995813300031236PalsaMRIPIESSRSYRGRNSRPNWLALLALIGIALGAGAIGAIFSPGGSAKAAAWYAT
Ga0302318_1062486723300031258BogMRIPIESSTSYRGRNSRPNWLVFTAFVGLTLIIGAFGASLSPRLSAAA
Ga0302326_1216125513300031525PalsaMRIPVESSTSYRGRNAKPNWVVLLLFMGIALGVGALGILFLPG
Ga0310686_10384212423300031708SoilMRIPIESSTSYRGRNSRPNWLILAAFIATALAAGAVGAVFSPGVSASANH
Ga0310686_11042620523300031708SoilMRIPIESSRSYRGRNSRPNWLALLGFIGVALGAGAIGAIFSPGGSAKA
Ga0307476_1110319813300031715Hardwood Forest SoilMRIPIESSTSYRGRNSRPNLPALALFLVLTLSAGV
Ga0307474_1077784423300031718Hardwood Forest SoilMRIPVESPTSYRGRNARPNWVTLMLFLGLALGAGALGYLFSPAHSPATAHW
Ga0307478_1005603543300031823Hardwood Forest SoilVRIPIESSTSYRGRNSRPNFPALAAFLALSLGTGVVGALFSPGFSASAAHWYAALAKPAWLPPQS
Ga0307478_1084300813300031823Hardwood Forest SoilMRIPIESSTSYRGRNSRPNLPALALFLVLTLSAGVV
Ga0302315_1074699813300031837PalsaMRIPIESSRSYRGRNSRPNWLALLGLIGLALGAGAIGAIFSPGGSAKA
Ga0302322_10247955523300031902FenMRIPIESSTSYRGRNARPNWLLLAAFIGSALAAGALGALFSPAVSAATRQWYAALAKPGWAPSDSWF
Ga0335078_1075877013300032805SoilMRIPVESKTSYRGRNSRPNWLALLGFILLALAAGAAGAVFSPGGSARAAAWYAGLSKPAWVAP
Ga0370483_0225971_454_6393300034124Untreated Peat SoilMKIPIESSTSYRGRNSRANLPALVVFLLLTLGVGAVGALFSPGFSASVAHWYSGLIKPAWLP
Ga0370483_0338327_385_5193300034124Untreated Peat SoilMRIQVERSTSYRGRNARPNWLILAAFVAGALLAGAIGAIFSPAVS
Ga0370492_0007206_3_1853300034282Untreated Peat SoilMRIPVENTTSYRGRNARPNWIALLGFIAMACAAGGLGALVSPARSAAIGAWYAGLVKPPW


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.