Metagenome / Metatranscriptome Family F059226

Basic Information
Family ID	F059226
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	48 residues
Representative Sequence	MTAATSAPVRHRPPRAGGAVPLAAARLLRIELRRNAMPWVLPLIAAL
Number of Associated Samples	112
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.73 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.54 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.761 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.776 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.522 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1Ga0062387_1008393771 2Ga0066388_1043654801 3Ga0066388_1048878392 4Ga0070713_1015332382 5Ga0070706_1007352672 6Ga0070707_1003274813 7Ga0070733_102792581 8Ga0066699_112348372 9Ga0070761_106947832 10Ga0066903_1016146501 11Ga0075276_100887292 12Ga0070712_1001943613 13Ga0070765_1002774951 14Ga0099827_111124141 15Ga0126373_121774951 16Ga0126373_125509331 17Ga0126306_100710201 18Ga0134084_103961871 19Ga0126378_117759481 20Ga0126378_119852161 21Ga0126377_110229451 22Ga0126379_119763192 23Ga0126381_1000098671 24Ga0126381_1050402021 25Ga0134126_103937073 26Ga0126350_113528052 27Ga0153922_11406551 28Ga0137377_117075852 29Ga0137372_106320021 30Ga0164301_118932982 31Ga0126369_104001681 32Ga0157374_118285932 33Ga0181525_100144001 34Ga0181522_100334775 35Ga0182036_103465551 36Ga0182032_107813831 37Ga0182037_112442602 38Ga0182039_118572491 39Ga0182038_101719713 40Ga0187767_102269271 41Ga0187890_108527412 42Ga0187765_108086991 43Ga0187772_100245561 44Ga0190268_118309041 45Ga0210407_101036844 46Ga0210399_109382041 47Ga0210408_104890633 48Ga0210396_111689742 49Ga0210389_106307912 50Ga0210387_108203051 51Ga0210386_115401241 52Ga0210384_108425822 53Ga0210410_111808981 54Ga0126371_105909351 55Ga0126371_111147781 56Ga0207684_100099991 57Ga0207646_103925631 58Ga0207700_111368862 59Ga0179587_102389651 60Ga0208989_102312671 61Ga0209073_104412681 62Ga0209517_106789943 63Ga0209167_104474471 64Ga0209275_102773291 65Ga0209380_106561811 66Ga0209069_108894411 67Ga0247684_10615452 68Ga0307282_101874821 69Ga0318534_100353811 70Ga0318573_106119322 71Ga0318515_101638823 72Ga0310915_107937981 73Ga0310915_108683431 74Ga0318561_100814842 75Ga0318560_102225743 76Ga0318496_101684791 77Ga0318496_104426872 78Ga0318496_105771471 79Ga0318496_107303691 80Ga0318496_108482062 81Ga0310813_104978471 82Ga0306917_113015401 83Ga0318493_102694542 84Ga0318500_101284601 85Ga0306918_100772581 86Ga0306918_101826923 87Ga0306918_113993801 88Ga0318492_102609842 89Ga0318494_100763231 90Ga0318554_101074231 91Ga0318554_101104711 92Ga0318554_104133991 93Ga0318521_105834571 94Ga0318546_102573061 95Ga0318546_111222051 96Ga0318547_103300352 97Ga0318548_104571821 98Ga0318503_102958832 99Ga0318523_100726851 100Ga0318568_102463993 101Ga0318567_105690882 102Ga0318564_103351611 103Ga0318564_103949242 104Ga0318517_100930441 105Ga0318517_102342471 106Ga0318495_101947021 107Ga0318551_100840871 108Ga0306923_103392234 109Ga0306923_119474981 110Ga0306921_104030951 111Ga0310909_111978371 112Ga0306926_116179841 113Ga0306926_116226461 114Ga0318530_103638912 115Ga0318531_105730572 116Ga0318563_100784271 117Ga0318563_106879901 118Ga0318507_102669492 119Ga0310911_100696601 120Ga0318556_103519841 121Ga0318558_104923462 122Ga0318570_102982352 123Ga0318575_100837311 124Ga0318505_105209982 125Ga0318504_100327962 126Ga0318513_102386681 127Ga0318513_102742291 128Ga0318553_107087311 129Ga0306924_104921001 130Ga0268251_105286611 131Ga0306920_1011125203 132Ga0306920_1025427391 133Ga0335076_110170851 134Ga0335073_104224611
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1Ga0062387_1008393771 2Ga0066388_1043654801 3Ga0066388_1048878392 4Ga0070713_1015332382 5Ga0070706_1007352672 6Ga0070707_1003274813 7Ga0070733_102792581 8Ga0066699_112348372 9Ga0066903_1016146501 10Ga0075276_100887292 11Ga0070712_1001943613 12Ga0070765_1002774951 13Ga0126373_121774951 14Ga0126373_125509331 15Ga0126306_100710201 16Ga0126377_110229451 17Ga0126381_1050402021 18Ga0134126_103937073 19Ga0126350_113528052 20Ga0153922_11406551 21Ga0137377_117075852 22Ga0126369_104001681 23Ga0182036_103465551 24Ga0187890_108527412 25Ga0187765_108086991 26Ga0210399_109382041 27Ga0210396_111689742 28Ga0210384_108425822 29Ga0126371_111147781 30Ga0310915_108683431 31Ga0318496_108482062 32Ga0310813_104978471 33Ga0318500_101284601 34Ga0318523_100726851 35Ga0318564_103351611 36Ga0318553_107087311 37Ga0335076_110170851 38Ga0335073_104224611
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46. 1Ga0318517_100930441 2Ga0062387_1008393771 3Ga0066388_1043654801 4Ga0066388_1048878392 5Ga0070713_1015332382 6Ga0070706_1007352672 7Ga0070707_1003274813 8Ga0066699_112348372 9Ga0066903_1016146501 10Ga0075276_100887292 11Ga0070712_1001943613 12Ga0099827_111124141 13Ga0126373_121774951 14Ga0126306_100710201 15Ga0134084_103961871 16Ga0126378_117759481 17Ga0126378_119852161 18Ga0126381_1050402021 19Ga0134126_103937073 20Ga0126350_113528052 21Ga0153922_11406551 22Ga0137377_117075852 23Ga0164301_118932982 24Ga0126369_104001681 25Ga0181525_100144001 26Ga0182038_101719713 27Ga0187767_102269271 28Ga0187890_108527412 29Ga0187765_108086991 30Ga0187772_100245561 31Ga0210399_109382041 32Ga0210396_111689742 33Ga0210389_106307912 34Ga0210410_111808981 35Ga0126371_105909351 36Ga0126371_111147781 37Ga0207684_100099991 38Ga0209167_104474471 39Ga0209275_102773291 40Ga0209380_106561811 41Ga0209069_108894411 42Ga0247684_10615452 43Ga0318515_101638823 44Ga0310915_108683431 45Ga0318560_102225743 46Ga0318496_104426872 47Ga0318496_105771471 48Ga0310813_104978471 49Ga0318503_102958832 50Ga0318523_100726851 51Ga0318495_101947021 52Ga0318556_103519841 53Ga0318513_102742291 54Ga0318553_107087311 55Ga0268251_105286611 56Ga0306920_1011125203 57Ga0335073_104224611
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.67% β-sheet: 0.00% Coil/Unstructured: 61.33%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00005	ABC_tran	78.36
PF08281	Sigma70_r4_2	3.73
PF04542	Sigma70_r2	2.24
PF13432	TPR_16	1.49
PF01434	Peptidase_M41	0.75
PF12831	FAD_oxidored	0.75
PF07730	HisKA_3	0.75
PF13304	AAA_21	0.75
PF13401	AAA_22	0.75
PF00561	Abhydrolase_1	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.24
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.24
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.24
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.24
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.75
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.75
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.75
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.76 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.76 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.76 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	94.78 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.81 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.99 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.61 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	2.99 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	13.43 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	5.97 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	2.99 %
Unclassified	root	N/A	2.24 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.97 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	5.97 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	2.99 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	13.43 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.97 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	5.97 %
Hamadaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea	0.75 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	5.97 %
Unclassified	root	N/A	2.24 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	2.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.97 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	5.97 %
Hamadaea tsunoensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea tsunoensis	0.75 %
Micromonospora narathiwatensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora narathiwatensis	5.97 %
Unclassified	root	N/A	2.24 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	2.99 %

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_100839377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea tsunoensis	689	Open in IMG/M
3300005332\|Ga0066388_104365480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	721	Open in IMG/M
3300005332\|Ga0066388_104887839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	681	Open in IMG/M
3300005436\|Ga0070713_101533238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	647	Open in IMG/M
3300005467\|Ga0070706_100735267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	914	Open in IMG/M
3300005468\|Ga0070707_100327481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1488	Open in IMG/M
3300005541\|Ga0070733_10279258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1102	Open in IMG/M
3300005561\|Ga0066699_11234837	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005591\|Ga0070761_10694783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300005764\|Ga0066903_101614650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1230	Open in IMG/M

Showing 1 to 10 of 134 entries

Previous1 2 3 4 5…14Next

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.76%
Host-Associated	Host-Associated	2.24%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	3.73%
Fungi	Host-Associated → Fungi	0.75%
Plants	Host-Associated → Plants	1.49%
Terrestrial	Environmental → Terrestrial	94.03%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	2.99%
Mycelium	Host-Associated → Fungi → Mycelium	0.75%
Phylloplane	Host-Associated → Plants → Phylloplane	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.75%
Sediment	Environmental → Aquatic → Sediment	0.75%
Soil	Environmental → Terrestrial → Soil	94.03%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	11.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.75%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.99%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.49%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.75%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.75%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.24%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.99%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005898	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405	Environmental	Open in IMG/M

Showing 1 to 10 of 112 entries

Previous1 2 3 4 5…12Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1008393771	3300004091	Bog Forest Soil	MTAATDAPARHRPPRAGGAVTRTAARLLQIELRRSAMPWILPVIAVLFWFDSFRSGPPTP
Ga0066388_1043654801	3300005332	Tropical Forest Soil	MRHRTPLAASAVPWGAARLMRVELRRNAMPWILPLIAALFWFDSYRPS
Ga0066388_1048878392	3300005332	Tropical Forest Soil	MSALPDALVRHRTPRATSAVPRNAARLLRVELRRNAMPWILPLLA
Ga0070713_1015332382	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRAAAAAAPARYRAPRVSGADLLTAARLVRVEMRRNAMPWILPLIAALFWFDSYR
Ga0070706_1007352672	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTAATGVPVRHRTPRATSVIPLNAARLLRVELRRNTMPWILPLIAALFWFDSYRPSTG
Ga0070707_1003274813	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTATTDAPVRPRPSSAARAVPLTAARLLRIELRHSPMPWILPLIAALF
Ga0070733_102792581	3300005541	Surface Soil	MTAAAAAPVRYRAPRASGAVLLTAARLVRVEMRRNAMPWILPLIAA
Ga0066699_112348372	3300005561	Soil	MNVEIGNVTRPFGRTPAAAVPVRHRTPRAAGAVPLNAARLLRVELRRNTMPWILPLIAALFWFDSY
Ga0070761_106947832	3300005591	Soil	VTAVADAPARHRPPRAGGAATLTAARLLRIELRRSAMPWILPVIAALFWFDSY
Ga0066903_1016146501	3300005764	Tropical Forest Soil	MTATTTTAVRPRPPRATGAVPVTAARLLRIELRRNAMPLILPLIAALFWFDSYRPSTA
Ga0075276_100887292	3300005898	Rice Paddy Soil	MTAVSDTPVRHRPERAASAVPLSVARLLRIDLRRNPLPLILPLIAALFWFDSYRPST
Ga0070712_1001943613	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTAATEAPARRREPRAPRTAPLSAARLLRIELRHNA
Ga0070765_1002774951	3300006176	Soil	MTAAATAPARHLPSRARGAVTLSAARLLRIELRRSTMP
Ga0099827_111124141	3300009090	Vadose Zone Soil	MTAATDAPVRPRAPRAARAVPLTAARLLRIELRRGAMPWILPLVA
Ga0126373_121774951	3300010048	Tropical Forest Soil	MTATTGTAVRPRPPRAARAVPVTAGRLLRIELRRNAM
Ga0126373_125509331	3300010048	Tropical Forest Soil	MTAAASAPMRHRPPRAGGAVPLAAARLLRIELRRNAMPWALPL
Ga0126306_100710201	3300010166	Serpentine Soil	MTAATDAPVRHGPPRAASTGPLTAVRLLRIELRRNAMRWMLPLLAA
Ga0134084_103961871	3300010322	Grasslands Soil	MTATTDAPVRPRAPHATRAVPLTAARLLRIELRHSPMLWILPLIAALFWF
Ga0126378_117759481	3300010361	Tropical Forest Soil	MTAATGAQVRRRTPRATSAVPRGAVRLLRVELRQNTMPWILPLIAALFWFDSYRPSTGA
Ga0126378_119852161	3300010361	Tropical Forest Soil	MTAMTAPVRNRVPRVTGVVPLNAARLLGVELRRNTMPWILPLIAVLFWFDSYRPSAGTS
Ga0126377_110229451	3300010362	Tropical Forest Soil	MTAATSAPARPRAPRAARVVPLSAWRLLRVELRRNAMPW
Ga0126379_119763192	3300010366	Tropical Forest Soil	MTATTGTAVRPRPPRATGAVPMTAARLLRIELRRNAMPLILPLIAAVFWFDSYRPSTAT
Ga0126381_1000098671	3300010376	Tropical Forest Soil	MTAATGAQVRRRTPRATSAVPRGAARLLRVELRQNTMPWILPLIAA
Ga0126381_1050402021	3300010376	Tropical Forest Soil	MTAATTAPVRHRAPNANRAVLLTAARLLGVELRRNSMPWILP
Ga0134126_103937073	3300010396	Terrestrial Soil	MRHRNPRAAGLVPQGALRLLRVELRRNAMPWILPLIAALFWF
Ga0126350_113528052	3300010880	Boreal Forest Soil	MTAATDAQVRRQTPRATSAVPLSTARLLRVELRRNAMPW
Ga0153922_11406551	3300012181	Attine Ant Fungus Gardens	MTAAAATPVRHRPPRATAAVPLTAVRLLRIELRRSPMPLILPLIAALFWF
Ga0137377_117075852	3300012211	Vadose Zone Soil	MTATTGTAVRQRPPRATGAVPLTEARLLRIELQRNAMPLILPLIA
Ga0137372_106320021	3300012350	Vadose Zone Soil	MTTATGAPVRHRTPRATSAVPLNAARLLRVELRRNAMPWILPLI
Ga0164301_118932982	3300012960	Soil	MTAATSAPARPRAPRVTRALPLGAWRLLRVELRRNAMPWMLP
Ga0126369_104001681	3300012971	Tropical Forest Soil	MATATRAPVRRRTPRATSAVSLGAARLLRVELRRNAM
Ga0157374_118285932	3300013296	Miscanthus Rhizosphere	MTAATSAPARPGAPRAARAIPLTAWRLLRVELRRN
Ga0181525_100144001	3300014654	Bog	MTATTSAPVRQQPPRAPRPVPLTAARLLRIELRRSAMPWILPLIAAA
Ga0181522_100334775	3300014657	Bog	MTATTSAPVRQQPPRAPRPVPLTAARLLRIELRRSAMPWILPLIAAAFWFDSYRPST
Ga0182036_103465551	3300016270	Soil	MTAADAAPVRPGPRPACAVPLTAARLLRIELRRNAMPWALPLIAGLF
Ga0182032_107813831	3300016357	Soil	MTAANAAPVRPGPRLARAVPLTAARLLRIELRRNATPWALPLIAGLFWFDSFRQST
Ga0182037_112442602	3300016404	Soil	MTAATGAPVRHRTPRATSAVPLNAARLLRVELRRNTMPWILPLIAALLWFDSYRPSTGA
Ga0182039_118572491	3300016422	Soil	MTTATSTAVRQRPPRATGAVPLAAARLLRIELRRNAMPLILPLIAALFWFDS
Ga0182038_101719713	3300016445	Soil	MTATAGTAVRPRPPRATSAVPLTTARLLRIELRRNAMPLILPLIAALFWFD
Ga0187767_102269271	3300017999	Tropical Peatland	MTATTDAPARPRPARAARAVPLTAARLLWIELRRSPMPWILPLI
Ga0187890_108527412	3300018044	Peatland	MTAATSAPVRRQLPRAPRSVSLTAARLLWLELRRNAIPWILPLIA
Ga0187765_108086991	3300018060	Tropical Peatland	MTTATSAPLRRRAPRAGSAVPLSAARLVRLELRRNAIPWI
Ga0187772_100245561	3300018085	Tropical Peatland	MTAATDAPVRHRTPRAASAVPLGAAWLLRVELRRNTMP
Ga0190268_118309041	3300018466	Soil	MTAATDAPVRHGPPRAAIAGPLTAARLLRVELRRTAMGWMLPL
Ga0210407_101036844	3300020579	Soil	MTAAAGAPVRQRTPRATSAVPLSAARLLRVELRRNTMPWILPLI
Ga0210399_109382041	3300020581	Soil	MTATSSTAVRPRAPRATGAAPLTAARLLRIELRRNAMPLI
Ga0210408_104890633	3300021178	Soil	MTAAATAPVRHVPSRAGGAVTLSAARLLRIELRRSAM
Ga0210396_111689742	3300021180	Soil	MTAATAALATPRPARARGAVTLTAARLLRIELRRSAMPWILPVIALLFWFDS
Ga0210389_106307912	3300021404	Soil	MTAAAGAPVRQRTPRATSAVPLSAARLLRVELRRNTMPWILPLIAALFWFDSY
Ga0210387_108203051	3300021405	Soil	MTAAATAPARHLPSRAGGAVTLSAARLLRIELRRSTMPLIL
Ga0210386_115401241	3300021406	Soil	MTATTAAPVRPAPRAARAVPLTAMRLLRIELRRNA
Ga0210384_108425822	3300021432	Soil	MIAATDAPARHRPPRAGGAVTLTAARLLRIELRRSAMRWILPVIAV
Ga0210410_111808981	3300021479	Soil	MSATTDAPVRHRTPRAASVVPRGAARLLRVELRRNAMPWILPL
Ga0126371_105909351	3300021560	Tropical Forest Soil	MAAVAAASVRHRTPRAASVVPLNTARLLRVELRRNAMPWILPLIAALFWFDSYRPSTGTS
Ga0126371_111147781	3300021560	Tropical Forest Soil	MTAATEAPVRPRPGRAASAGPLTVARLLRIELRRSALPMI
Ga0207684_100099991	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAAATGAPVRHQTPRATSAVPLNAARLLRVELRRNAMPWILPLIAALFWFDS
Ga0207646_103925631	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTATTDAPVRPRPSSAARAVPLTAARLLRIELRHSPMPWILPLIAAL
Ga0207700_111368862	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTATTDAAVRPRAPRAARAVPLTAARLLRIELRHSPMPWILPLIAALFW
Ga0179587_102389651	3300026557	Vadose Zone Soil	MIAATDAPARHRPPRAGGAVTLTAARLLRIELRRSAMRWILPVIAVLLWFDSYRFATGTPPYWV
Ga0208989_102312671	3300027738	Forest Soil	MTAATDAPARHRPPHVGGAVTLTAARLLRIELRRSAMPWILPVIAVLFWFDSYRFGTGTPPYWVLR
Ga0209073_104412681	3300027765	Agricultural Soil	MTATTDAPVRPRPSGAARAVPLTAARLLRIELRHSPMPWILPLIVALFWF
Ga0209517_106789943	3300027854	Peatlands Soil	MTAATEAPARHRPPRAGGAVTLTAARLLRIELRHSAMPWILPV
Ga0209167_104474471	3300027867	Surface Soil	MTAAAAAPVRYRAPRASGAVLLTAARLVRVEMRRNAMPWILPLIAALFWF
Ga0209275_102773291	3300027884	Soil	MTAAATAPARHLPSRAGGAVTLSAARLLRIELRRSTMPLILPVIAALFWFDSYRFATGTP
Ga0209380_106561811	3300027889	Soil	VTAVADAPARHRPPRAGGAATLTAARLLRIELRRSAMPWILPVIAVLFWFDSYRFSG
Ga0209069_108894411	3300027915	Watersheds	MTATADAPVRPRAPRAARAVPLTAARLLRIELRHSPMPCILPLIPALFWFDSYRP
Ga0247684_10615452	3300028138	Soil	MTAATSAPARPRAPRAARVVPLSAWRMLRVELRRNAMPWILP
Ga0307282_101874821	3300028784	Soil	MTATTDAPVRPRAPRAARAVPLTAARLLRIELRRSPMPWILPLIAALLW
Ga0318534_100353811	3300031544	Soil	MTAAAAAPVRHRTPRATSALPFSAARLLRVELRRNTMPW
Ga0318573_106119322	3300031564	Soil	MTAATAAPVRHRTPRATGAVPLNATRLLWIELRRNAMPWILPLIA
Ga0318515_101638823	3300031572	Soil	MTATTDAPARPRAPHAARAVPLTAARLLRIELRRNAMPLIVPLIAALFWF
Ga0310915_107937981	3300031573	Soil	MTAATSAPVRHWPPRAGGAVPLAAARLLRIELRRNAMPWVLPLIAALF
Ga0310915_108683431	3300031573	Soil	MTVAAAVPVRHRTPRATSPVPLNAVRLLRVELRRNTMPWILPLI
Ga0318561_100814842	3300031679	Soil	MTAATSAPVRHRPPRARGAVPLAAARLLRIELRRNAMPWVLPL
Ga0318560_102225743	3300031682	Soil	MTAATAAEVRHRTPRATSALPFSAARLLRVELRRNTMPWILPLIAALFWFDSYRPSTGT
Ga0318496_101684791	3300031713	Soil	MTAATSAPVRHWPPRAGGAVPLAAARLLRIELRRNAMPWVLP
Ga0318496_104426872	3300031713	Soil	MTTATSTAVRQRPPRATGAVPLAAARLLRIELRRNAMPLI
Ga0318496_105771471	3300031713	Soil	MTAATSTAVRQRPPRATGAAALTAARLLRIELRRNAMPLILPLIAALFWFDSYRPST
Ga0318496_107303691	3300031713	Soil	MTAATDAPVRPRAPRAARAVPLTAARLLRIELRHSPMPWILPLIAALFW
Ga0318496_108482062	3300031713	Soil	MTATTSAPVRHRPPRAGGAVPLAAARLLRIELRRN
Ga0310813_104978471	3300031716	Soil	MATATGAPVRQHRAPRAAATVPLGAARLLRVELRRNAMPWILP
Ga0306917_113015401	3300031719	Soil	MTAATSAPVWHRPPRAGGAVPLAAARLLRIELRRNAMPWALPLIAAL
Ga0318493_102694542	3300031723	Soil	MTTATSTAVRQRPPRATGAVPLAAARLLRIELRRNAMPLILPLIAALFWFDSYRPS
Ga0318500_101284601	3300031724	Soil	MTAATAAPVRHRTPRATSAVPLIATRLLWIELRRNAMPWIL
Ga0306918_100772581	3300031744	Soil	MTAATAAPVRHRTPRATSALPFSAARLLRVELRRNTMPWILPLIAALFWFDSYRPSTGTSAL
Ga0306918_101826923	3300031744	Soil	MTAATSTAVRQRPPRATGSVPLTAARLLRIELRRNAMPLILPLIAALFWFDSYRPSTAMP
Ga0306918_113993801	3300031744	Soil	MTAATGAPVRHRTPRATSAVPLNAARLLRVELRRNTMPWILPLIAALFWFDSYRPS
Ga0318492_102609842	3300031748	Soil	MTAATAAPVRHRTPRATSAVPLNATRLLWIELRRNAMPWILPLIAA
Ga0318494_100763231	3300031751	Soil	MTTATSTAVRQRPPRATGAVPLAAARLLRIELRRNAMPLILPLIAALFW
Ga0318554_101074231	3300031765	Soil	MTATTDAPVRPRAPRAARAVPLTAARLLRIELRHSPMPWILPLIA
Ga0318554_101104711	3300031765	Soil	MTAATSAPVRHRPPRAGGAVPLAAARLLRIELRRN
Ga0318554_104133991	3300031765	Soil	MTAATSTAVRQRPPRATGSVPLTAARLLRIELRRNAMPLILPLIAALFWFDSYRPS
Ga0318521_105834571	3300031770	Soil	MTAATAAPVRHRTPRATGAVPLNATRLLWIELRRNAMPWILPLIAALFW
Ga0318546_102573061	3300031771	Soil	MTAATSAPVRHRPPRAGGAVPLAAARLLRIELRRNAMPWVLP
Ga0318546_111222051	3300031771	Soil	MTATTDAPVRPRAPHAARAVPLTAARLLRIELRHSPMPWILPLIAALFWFDS
Ga0318547_103300352	3300031781	Soil	MTATAGTAVRPRPPRATSAVPLTTARLLRIELRRNAMPLILPLIAALFWFDSYRPSTATP
Ga0318548_104571821	3300031793	Soil	MTATTDAPVQSRAPHAARAVPLTAARLLRIELRHSPMPWILPLIAALFWFDSYRPS
Ga0318503_102958832	3300031794	Soil	MTATTGTAVRPRPPRRWRAAPMTAARLLRIELRRNAMPLILPL
Ga0318523_100726851	3300031798	Soil	MTAANAAPVRPGPRLARAVPLTAARLLRIELRRNATPWALPLIAGLFWFDSFRQSTGQPPFW
Ga0318568_102463993	3300031819	Soil	MTAATSAPVRHRPPRAEGAVPLAAARLLRIELRRN
Ga0318567_105690882	3300031821	Soil	MTAATSAPVRHRPPRAEGAVPLAAARLLRIELRRNAMPWALPL
Ga0318564_103351611	3300031831	Soil	MTAATDAPVRHRTRRATSAVPFNAARLLRVELRRNT
Ga0318564_103949242	3300031831	Soil	MTAATAAPVRHRTPRATSAVPLSAARLLRVELRRNTMPWILPLIAALLWFDSYRPSTGTSALYGLR
Ga0318517_100930441	3300031835	Soil	MTAATSAPVRHRPPRAGGAVPLAAARLLRIELRRNAMPWVLPLIAAL
Ga0318517_102342471	3300031835	Soil	MTAATAAPVRHRTPRATSALPFSAARLLRVELRRNTMP
Ga0318495_101947021	3300031860	Soil	MTAAAAAPLRHRAPRATSVVPLNAARLLRVELRRNTMPWILPLI
Ga0318551_100840871	3300031896	Soil	MTAANAAPVRPGPRLARAVPLTAARLLRIELRRNATPWALPLIAGLFW
Ga0306923_103392234	3300031910	Soil	MTAATAAPVRQRTPRATGAVPLNATRLLWIELRRNAMPWILPLIA
Ga0306923_119474981	3300031910	Soil	MTAATDAPVRHRTPRATSAVPFNAARLLRVELRRNTMPWILPLIAALFWF
Ga0306921_104030951	3300031912	Soil	MTAATAAPVRQRTPRATGAVPLNATRLLWIELRRNA
Ga0310909_111978371	3300031947	Soil	MTATAGTAVRPRPPRATSAVPLTTARLLRIELRRNAMPLILPLIAALFWFDSYRPSTA
Ga0306926_116179841	3300031954	Soil	MTATAGTAVRPRPPRATSAVPLTTARLLRIELRRNAMPLILPLIAALFWFDSYRPS
Ga0306926_116226461	3300031954	Soil	MTAATAAPVRHRTPRATSAVPLSAARLLRVELRRNTMPWILPLIAALVWFDS
Ga0318530_103638912	3300031959	Soil	MTATTDAPARPRAPHAARAVPLTAARLLRIELRRNAMPLI
Ga0318531_105730572	3300031981	Soil	MTAATSTAVRQRPPRATGAVPLTAARLLRIELRRNAMPLILPLIAALFWFDSY
Ga0318563_100784271	3300032009	Soil	MTAATSAPVRHRPPRARGAVPLAAARLLRIELRRNAMPWVLPLIAA
Ga0318563_106879901	3300032009	Soil	MTATTDAPARPRAPHAARAVPLTAARLLRIELRRNAMPLILPLIAALFWFDSYRPST
Ga0318507_102669492	3300032025	Soil	MTATTDAPARPRAPHAARAVPLTAARLLRIELRRNAMPLILPLIAALFW
Ga0310911_100696601	3300032035	Soil	MTAAAAAPVRHRTPRATSAVPLSAARLLRVELRRNTMP
Ga0318556_103519841	3300032043	Soil	MTATTRATVRARPPRATGAVPMTAARLLRIELRRNAMPLILPLIAALFWFDSY
Ga0318558_104923462	3300032044	Soil	MTTVTGTAVRQRSPRAGGAGPLTAARLLRIELRHNTMPLI
Ga0318570_102982352	3300032054	Soil	MTATAGTAVRPRPPRATSAVPLTTARLLRIELRRNAMPLILPLIAALFWFDSY
Ga0318575_100837311	3300032055	Soil	MTAATSAPVRHRPPRAGGAVPLAAARLLRIELRRNAMPW
Ga0318505_105209982	3300032060	Soil	MTAATSTAVRQRPPRATGAAALTAARLLRIELRRNAMPLILPLIAVLFWFDSYR
Ga0318504_100327962	3300032063	Soil	MTAATSAPVRHRPPRAGGAVPLAAARLLRIELRRNAMPWALPL
Ga0318513_102386681	3300032065	Soil	MTAATAAPVRHRTPRATGAVPLNATRLLWIELRRNAMPWILPLIAALFWFDSY
Ga0318513_102742291	3300032065	Soil	MTAATDAPVRHRTRRATSAVPFNAARLLRVELRRNTMPWILALIAALFWFDSYRPSTGT
Ga0318553_107087311	3300032068	Soil	MTTVTGTAVRQRSPRAGGAGPLTAARLLRIELRHNTMPLILPLIAALFWFDSYRPSAATPPLYVM
Ga0306924_104921001	3300032076	Soil	MTAATSAPVRHRPPRARGAVPLAAARLLRIELRRNA
Ga0268251_105286611	3300032159	Agave	MTAATHSPVRHGPPRAASAGPLTAARLLRLELRRTAMGWMLPLLAALF
Ga0306920_1011125203	3300032261	Soil	MTAATAAPVRHRTPRATSAVPLNATRLLWIELRRNAMPWILPLIAALFWF
Ga0306920_1025427391	3300032261	Soil	MTAATAAPVRHRTPRATSAVPLSAARLLRVELRRNTMPWILPLIAALLWFDS
Ga0335076_110170851	3300032955	Soil	MTAATAAPVRHRTPRATGAIPLNTARLLWIELRRNAMPWILPLIAALFWFD
Ga0335073_104224611	3300033134	Soil	MTATSAPVRCTPQAGRAAPLGLARLLRVELRRNAMPF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059226

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences