NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F059219

Metagenome / Metatranscriptome Family F059219

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F059219
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 68 residues
Representative Sequence MPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAREASDELSAIALRYAVIDGKELAVAKEAARTHPVKPS
Number of Associated Samples 118
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 4.17 %
% of genes near scaffold ends (potentially truncated) 65.67 %
% of genes from short scaffolds (< 2000 bps) 66.42 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (58.955 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(8.209 % of family members)
Environment Ontology (ENVO) Unclassified
(29.104 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(41.791 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 58.76%    β-sheet: 0.00%    Coil/Unstructured: 41.24%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF01896DNA_primase_S 21.05
PF04679DNA_ligase_A_C 9.02
PF01039Carboxyl_trans 1.50
PF13298LigD_N 1.50
PF12697Abhydrolase_6 0.75
PF03255ACCA 0.75
PF08442ATP-grasp_2 0.75
PF10899AbiGi 0.75
PF01914MarC 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 133 Family Scaffolds
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 9.02
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 2.26
COG0458Carbamoylphosphate synthase large subunitAmino acid transport and metabolism [E] 1.50
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 1.50
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 1.50
COG0026Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)Nucleotide transport and metabolism [F] 0.75
COG0045Succinyl-CoA synthetase, beta subunitEnergy production and conversion [C] 0.75
COG0151Phosphoribosylamine-glycine ligaseNucleotide transport and metabolism [F] 0.75
COG1042Acyl-CoA synthetase (NDP forming)Energy production and conversion [C] 0.75
COG2095Small neutral amino acid transporter SnatA, MarC familyAmino acid transport and metabolism [E] 0.75


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.96 %
All OrganismsrootAll Organisms41.04 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459014|G1P06HT01B0UCZAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria530Open in IMG/M
3300001534|A15PFW1_10149867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria875Open in IMG/M
3300001536|A1565W1_11083049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1555Open in IMG/M
3300001537|A2065W1_10724621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria608Open in IMG/M
3300001538|A10PFW1_10330322Not Available929Open in IMG/M
3300001538|A10PFW1_11414164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1333Open in IMG/M
3300002568|C688J35102_120037401Not Available855Open in IMG/M
3300002568|C688J35102_120383223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1029Open in IMG/M
3300003992|Ga0055470_10099727Not Available715Open in IMG/M
3300004153|Ga0063455_100543091Not Available738Open in IMG/M
3300004479|Ga0062595_100841915Not Available763Open in IMG/M
3300005180|Ga0066685_10761663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria659Open in IMG/M
3300005186|Ga0066676_10565623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium771Open in IMG/M
3300005327|Ga0070658_10798800Not Available820Open in IMG/M
3300005336|Ga0070680_101202614Not Available656Open in IMG/M
3300005339|Ga0070660_101313790Not Available614Open in IMG/M
3300005435|Ga0070714_100150038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2100Open in IMG/M
3300005435|Ga0070714_101051737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria793Open in IMG/M
3300005436|Ga0070713_101243754Not Available721Open in IMG/M
3300005439|Ga0070711_100793817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria802Open in IMG/M
3300005456|Ga0070678_100209881All Organisms → cellular organisms → Bacteria1613Open in IMG/M
3300005458|Ga0070681_12048821All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria500Open in IMG/M
3300005526|Ga0073909_10342995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria690Open in IMG/M
3300005529|Ga0070741_10063518All Organisms → cellular organisms → Bacteria4260Open in IMG/M
3300005530|Ga0070679_100215898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1880Open in IMG/M
3300005530|Ga0070679_101034358Not Available765Open in IMG/M
3300005532|Ga0070739_10270087Not Available830Open in IMG/M
3300005533|Ga0070734_10068933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2106Open in IMG/M
3300005539|Ga0068853_101215167Not Available728Open in IMG/M
3300005547|Ga0070693_101600684Not Available512Open in IMG/M
3300005577|Ga0068857_100061752All Organisms → cellular organisms → Bacteria3329Open in IMG/M
3300005614|Ga0068856_100067086All Organisms → cellular organisms → Bacteria3545Open in IMG/M
3300005764|Ga0066903_106369818All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300006606|Ga0074062_12550458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria622Open in IMG/M
3300006804|Ga0079221_11173936All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria594Open in IMG/M
3300009093|Ga0105240_10515579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1327Open in IMG/M
3300009098|Ga0105245_11369144Not Available757Open in IMG/M
3300009098|Ga0105245_11966041Not Available638Open in IMG/M
3300009162|Ga0075423_11969020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium632Open in IMG/M
3300009176|Ga0105242_11560971Not Available693Open in IMG/M
3300009545|Ga0105237_11027092Not Available831Open in IMG/M
3300009551|Ga0105238_11049483Not Available837Open in IMG/M
3300009649|Ga0105855_1217801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria579Open in IMG/M
3300010376|Ga0126381_102301157Not Available774Open in IMG/M
3300010396|Ga0134126_12579774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria552Open in IMG/M
3300010399|Ga0134127_13499025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria514Open in IMG/M
3300010880|Ga0126350_10946705Not Available962Open in IMG/M
3300012011|Ga0120152_1074450Not Available1018Open in IMG/M
3300012014|Ga0120159_1033126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1762Open in IMG/M
3300012208|Ga0137376_11603787All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300012211|Ga0137377_10353896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1405Open in IMG/M
3300012212|Ga0150985_104764490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria540Open in IMG/M
3300012930|Ga0137407_11159625Not Available733Open in IMG/M
3300012944|Ga0137410_11255067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria640Open in IMG/M
3300012944|Ga0137410_11255067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria640Open in IMG/M
3300012961|Ga0164302_11729156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300012987|Ga0164307_10718515All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria785Open in IMG/M
3300013100|Ga0157373_10317264Not Available1108Open in IMG/M
3300013104|Ga0157370_10388961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1284Open in IMG/M
3300013296|Ga0157374_10762215Not Available983Open in IMG/M
3300013297|Ga0157378_12057509Not Available621Open in IMG/M
3300013307|Ga0157372_10649598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1228Open in IMG/M
3300013772|Ga0120158_10067739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2326Open in IMG/M
3300015372|Ga0132256_102428384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria626Open in IMG/M
3300016371|Ga0182034_10580109Not Available944Open in IMG/M
3300017937|Ga0187809_10277668Not Available612Open in IMG/M
3300020070|Ga0206356_10066695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria632Open in IMG/M
3300020081|Ga0206354_10144669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria669Open in IMG/M
3300020082|Ga0206353_10298655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1092Open in IMG/M
3300021377|Ga0213874_10239046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria666Open in IMG/M
3300024283|Ga0247670_1036298Not Available886Open in IMG/M
3300025898|Ga0207692_10360274Not Available898Open in IMG/M
3300025904|Ga0207647_10321050Not Available879Open in IMG/M
3300025922|Ga0207646_11821934Not Available520Open in IMG/M
3300025929|Ga0207664_10840484Not Available825Open in IMG/M
3300026041|Ga0207639_12096815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria527Open in IMG/M
3300026078|Ga0207702_11071040Not Available800Open in IMG/M
3300026142|Ga0207698_10338398All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1416Open in IMG/M
3300026216|Ga0209903_1070125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria500Open in IMG/M
3300026276|Ga0209847_1103660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300026552|Ga0209577_10048075All Organisms → cellular organisms → Bacteria3614Open in IMG/M
3300027874|Ga0209465_10437451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria654Open in IMG/M
3300028828|Ga0307312_10696287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria673Open in IMG/M
3300031238|Ga0265332_10484344All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria512Open in IMG/M
3300031240|Ga0265320_10560420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria505Open in IMG/M
3300031564|Ga0318573_10399495Not Available738Open in IMG/M
3300031640|Ga0318555_10205132All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1063Open in IMG/M
3300031682|Ga0318560_10403033Not Available740Open in IMG/M
3300031782|Ga0318552_10498391Not Available622Open in IMG/M
3300031799|Ga0318565_10456553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria618Open in IMG/M
3300031821|Ga0318567_10459653Not Available722Open in IMG/M
3300031859|Ga0318527_10187237Not Available874Open in IMG/M
3300031939|Ga0308174_10183091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1586Open in IMG/M
3300031996|Ga0308176_12931560Not Available506Open in IMG/M
3300032074|Ga0308173_10999043Not Available777Open in IMG/M
3300032805|Ga0335078_11186625Not Available883Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.21%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost6.72%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere5.97%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.22%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.48%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.48%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.99%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.99%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.99%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.24%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.49%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.49%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.49%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.49%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.49%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.49%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.49%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.49%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.75%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.75%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.75%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.75%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.75%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.75%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.75%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.75%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.75%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.75%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908043Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2EnvironmentalOpen in IMG/M
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
2170459006Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cmEnvironmentalOpen in IMG/M
2170459013Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cmEnvironmentalOpen in IMG/M
2170459014Litter degradation PV2EngineeredOpen in IMG/M
3300001534Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001537Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003992Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005532Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009649Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011994Permafrost microbial communities from Nunavut, Canada - A7_65cm_12MEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026216Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051 (SPAdes)EnvironmentalOpen in IMG/M
3300026276Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031238Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaGHost-AssociatedOpen in IMG/M
3300031240Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaGHost-AssociatedOpen in IMG/M
3300031251Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaGHost-AssociatedOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031712Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaGHost-AssociatedOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2_c1_005810002124908043SoilFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAAIDGRELTVAKQAARTHPVKPAT
A_all_C_027801402140918007SoilFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKEAARTHPVKPAT
L01_062437902170459006Grass SoilMLYLDDPATLDAKLGHAAKEASEELSMIAQRYAVIDGKELAVAKEASHTHPVKPG
N57_002785902170459013Grass SoilTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIAMRYAVIDGKELSVAKEAARTRPIKPG
2PV_003294302170459014Switchgrass, Maize And Mischanthus LitterIVLTTFWTRLLYLDDPSTLDAKLGHAAREASDELSAIALRYAAIDGRELAVAKQAARTHPVKPG
A15PFW1_1014986723300001534PermafrostAIFMPWVSIVLTTFWTRLLYLDDPETVDAKLGHAAKEASEELSAIAMRYAVIDGRELAVAKEAARTRPVKPTA*
A1565W1_1108304923300001536PermafrostMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAAIDGKELTVAKQAARTHPVKPAV*
A2065W1_1072462113300001537PermafrostALERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAAIDGKELTVAKQAARTHPVKPAV*
A10PFW1_1033032213300001538PermafrostLERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAAIDGRELSVAKQAARTHPVKA*
A10PFW1_1141416413300001538PermafrostLLYLDDPATLDAKLGHAAKEASDELSAIAMRYAAIDGKELSVAKQAARTHPVKP*
C688J35102_12003740123300002568SoilSAALERNAIFMPWVSIVLTTFWTRLLYLDDPETLDAQLGHAAREASEELSAIALRYAVIDGKELAVAKEAARTHPVKPGA*
C688J35102_12038322313300002568SoilNAIFMPWVSIVLTTFWTRMLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTRPKPAS*
C688J35102_12083305523300002568SoilWTRMLYLDDEATLDAKLGHAAREASEELSAIALRYAVIDGKELTVAKEAARTHPVKAS*
Ga0055470_1009972723300003992Natural And Restored WetlandsNAIFMPWVSIVLTTFWTRLLYLDDAATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVG*
Ga0063455_10054309113300004153SoilPSAALERNAIFMPWVSIVLTTFWTRLLYIDDPETLHVKLGQAAKEASDELSAIALRYAVIDGKELSVAKEAARTRPVKPAS*
Ga0062595_10084191513300004479SoilIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASEELSAIAMRYAVIDGRELAVAKQAARTHPVKPGT*
Ga0066685_1076166313300005180SoilWVSIVLTTFWTRLLYLDDPETLDLKLGKAAKEASDELSAIALRYAVIDGRELAVAKEAARTRPVIPKP*
Ga0066676_1056562323300005186SoilALERNAIFMPWVSIVLTTFWTRLLYIDDPETLHVKLGQAAKEASDELSAIALRYAVIDGKELTVAKEAARTRPVKPAS*
Ga0066675_1134173913300005187SoilYLDDPATLDAKLGHAAKEASEELSAIAMRYAVIDGKELAVAKQAARTHIRPGA*
Ga0070658_1079880013300005327Corn RhizosphereAIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHATKEASEELSAIAMRYAVIDGKELAVAKQAARTHPVKAS*
Ga0070683_10175359313300005329Corn RhizosphereTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIAMRYAVIDGKELSVAKEAARTRPKLGA
Ga0070680_10067815413300005336Corn RhizosphereLLYLDDPETLDAKLGHAAKEASDELSAIAMRYAMIDGRELTVAKEAARTKPVKPMT*
Ga0070680_10120261413300005336Corn RhizosphereSAALERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVA*
Ga0070682_10048107123300005337Corn RhizosphereRLLYLDDAATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVT*
Ga0070660_10131379013300005339Corn RhizosphereVQRPSAALERNAIFMPWVSVVLTTFWTRLLYLDDPATLDQKLGRAAKEASDELSTIAMRYAQIDSRELAVAKEAAHTRPTRAATAPARATASS*
Ga0070714_10015003813300005435Agricultural SoilFMPWVSIVLTTFWTRLLYLDDAATLDAKLGHAAKEASDELSAIALRYAVIDGKELAVARQAARTHP*
Ga0070714_10105173723300005435Agricultural SoilNAIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTRPTKPV*
Ga0070713_10124375413300005436Corn, Switchgrass And Miscanthus RhizosphereIFMPWVSIVLTTFWTRLLYVDDPATLDATLGKAAKEASDELSAIALRYAVIDGRELAVAKEAARTRPAKPAT*
Ga0070711_10079381713300005439Corn, Switchgrass And Miscanthus RhizosphereNAIFMPWVSIVLTTFWTRLLYLDNPETLNAELGKAAKEASDELSAIALRYAVIDGRELAVAKEAARTHPVKPTA*
Ga0070678_10020988123300005456Miscanthus RhizosphereVLTTFWTRMLYLDDPATLDAKLGKAAKDASEELSAIAMRYAVIDGKELAVARQAARTHPVKPGT*
Ga0070681_1204882123300005458Corn RhizosphereSIVLTTFWTRLLYLDDTATLDAKLGHAAKEASDELSAIALRYAVIDGKELSVAKEASRTHPVKAS*
Ga0073909_1034299513300005526Surface SoilAIFMPWVSIVLTTFWTRLLYLDNPETLNAELGKAAKEASDELSAIALRYAVIDGRELAVAKEAARTRPVKPTA*
Ga0070741_1006351823300005529Surface SoilMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAREASDELSAIALRYAVIDGKELAVAKEAARTHPVKPS*
Ga0070679_10021589823300005530Corn RhizosphereNAIFMPWVSIVLTTFWTRLLYLDDAATLDAKLGHAAKEASEELSAIALRYAVIDGKELTVAKQAARTHVT*
Ga0070679_10103435823300005530Corn RhizosphereNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVA*
Ga0070739_1027008713300005532Surface SoilERNAIFMPWVSIVLTTFWTRLLYLDDEATLDAKLGHAAKEASEELSAIAMRYAVIDGKELTVAKQAARTHIKPGT*
Ga0070734_1006893323300005533Surface SoilLERNAIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTRPTKPV*
Ga0068853_10121516723300005539Corn RhizosphereNAIFMPWVSIVLTTFWTRLLYLDDAATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVT*
Ga0070693_10160068413300005547Corn, Switchgrass And Miscanthus RhizosphereIFMPWVSIVLTTFWTRLLYLDDTATLDAKLGHAAKEASDELSAIALRYAVIDGKELAVAKQAARTHVT*
Ga0068855_10222317023300005563Corn RhizosphereTRLLYMDDPRTLDAQLGRAAKEASDELSVIAARYASIDSRELSVAKEAARTRPAKPV*
Ga0068857_10006175213300005577Corn RhizosphereAALERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVA*
Ga0068856_10006708613300005614Corn RhizosphereALERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVA*
Ga0066903_10636981813300005764Tropical Forest SoilSAALERNAIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGKAAKEASDELSAIALRYAVIDGRELAVAKEAARTHPVKPTP*
Ga0070712_10046807033300006175Corn, Switchgrass And Miscanthus RhizosphereTTFWTRMLYLDDPATLDAKLGHAAKEASDELSAIAQRYAVIDGKELAVAKEASHTHPVKP
Ga0074062_1201323013300006606SoilDDPATLDATLGKAAKEASDELSAIALRYAVIDGRELSVAKEAARTRPAKPVT*
Ga0074062_1255045813300006606SoilNAIFMPWVSIVLTTFWTRMLYLDDPATLDARLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTKPVKPTS*
Ga0075522_1014408213300006638Arctic Peat SoilPETLDAKLGHAAKEASDELSAIAMRYAVIDGRELTVAKEAARTRPVKQGA*
Ga0079221_1117393613300006804Agricultural SoilRNAIFMPWVSIVLTTFWTRMLYLDDPATLDAKLGKAAKDASDELSAIAMRYAVIDGKELSVAKEAARTRPTVPKS*
Ga0105240_1051557923300009093Corn RhizosphereALERNAIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAREASDELSAIALRYAVIDGKELTVAKEAARTHPVKPG*
Ga0105245_1136914423300009098Miscanthus RhizosphereWVSIVLTTFWTRLLYLDDEATLDAKLGHAAKEASDELSAIALRYAVIDGKELSVARQAARTHV*
Ga0105245_1196604113300009098Miscanthus RhizospherePSAALERNAIFMPWVSIVLTTFWTRMLYADDPATLDATLGKAAREASDELSAIALRYAVIDGKELAVAKEAARTKPVKPTL*
Ga0075423_1196902013300009162Populus RhizosphereIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIAMRYAVIDGKELAVARQAARTRPKI*
Ga0105242_1156097123300009176Miscanthus RhizosphereFMPWVSIVLTTFWTRMLYLDDPATLDAKLGKAAKDASDELSAIAMRYAVIDGKELSVAKEAARTRPTVPKS*
Ga0105237_1102709223300009545Corn RhizosphereSAALERNAIFMPWVSIVLTTFWTRLLYLDDAATLDAKLGHAAKEASEELSAIALRYAVIDGKELTVAKQAARTHVT*
Ga0105238_1104948323300009551Corn RhizosphereALERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELSVAKEASRTRPAKPL*
Ga0105855_121780123300009649Permafrost SoilFMPWVSIVLTTFWTRLLYLDDPATLDAQLGKAAKDASEELSMIAARYATIDQHELSVAKEAARTRPRPASP*
Ga0126381_10230115723300010376Tropical Forest SoilWVSIVLTTFWTRMLYLDDPETLDAKLGHAAREASDELSAIALRYAAIDGKELTVAKQAARTHPVKPS*
Ga0134126_1257977423300010396Terrestrial SoilLARNAIFITWVSIVPTTFRTRLNLPAAAATLDAKIGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVT*
Ga0134127_1349902523300010399Terrestrial SoilVSIVLTTFWTRMLYADDPATLDATLGKAAREASDELSAIALRYAVIDGKELAVAKEAARTKPVKPTL*
Ga0126350_1094670513300010880Boreal Forest SoilLERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAQLGKAAKDASDELSMIASRYASIDQHELVVAKEAARTRPRPAAP*
Ga0120157_105668323300011994PermafrostFWTRLLYLDDPATLDAKLGHAAKEASDELSAIAMRYAAIDGKELSVAKQAARTHPVKP*
Ga0120152_107445013300012011PermafrostAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAAIDGRELSVAKQAARTHPVKA*
Ga0120159_103312633300012014PermafrostVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAAIDGRELSVAKQAARTHPVKA*
Ga0137376_1160378723300012208Vadose Zone SoilPWVSIVLTTFWTRMLYLDDPETLDAKLGHAAKEASDELSAIAMRYAVIDGKELSVAKEAARTRPKLGA*
Ga0137377_1035389613300012211Vadose Zone SoilAALERNAIFMPCVSIVLTTFWTRLLYLDDPETLDAKLGRAAKEASDELSAIALRYAVIDGRELAVAKEAARTRPVKPML*
Ga0137377_1120312333300012211Vadose Zone SoilLYLDDPATLDAKLGHAAKEASDELSAIAMRYAVIDGRELAVAKQAARTHPVKPMT*
Ga0150985_10476449013300012212Avena Fatua RhizosphereIVLTTFWTRLLYIDDPETLHVKLGQAAKEASDELSAIALRYAVIDGKELSVAKEAARTRPVKPAS*
Ga0150984_11480849013300012469Avena Fatua RhizosphereTLDAKLSKAAKEASDELSAIAMRYAVIDGKELTVAKEAARTRPTTPKT*
Ga0137407_1115962513300012930Vadose Zone SoilVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIAMRYAVIDGKELSVAKEAARTRPKLGA*
Ga0137410_1125506713300012944Vadose Zone SoilIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIAMRYAVIDGKELSVAKEAARTRPKPTA*
Ga0137410_1125506723300012944Vadose Zone SoilIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIAMRYAVIDGRELAVAKEAARTRPVKPGV*
Ga0164298_1074358013300012955SoilDDPATLDATLGKAAKEASDELSAIALRYAVIDGKELAVAKEAARTKPVKPTS*
Ga0164302_1074795113300012961SoilFLDDPSPLDAKLGHAAKEASDELSAIAMRYAVIDGKELSVAKEAARTRPKLGA*
Ga0164302_1172915613300012961SoilNAIFMPWVSIVLTTFWTRMLYLDDPETLDAKLGKAAKEASDELSAIAMRYAVIDGKELTVAKEAARTRPSLPKS*
Ga0164307_1071851513300012987SoilMPWVSIVLTTFWTRMLYADDPATLDATLGKAAKEASDELSAIALRYAVIDGKELAVAKEAARTKPVKPTS*
Ga0157373_1031726413300013100Corn RhizosphereALERNAIFMPWVSIVLTTFWTRLLYLDDAATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVT*
Ga0157371_1119540723300013102Corn RhizosphereLYLDDPETLDAKLGHAAREASDELSAIALRYAVIDGKELTVAKEAARTHPVKPG*
Ga0157370_1038896123300013104Corn RhizosphereIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIAMRYAMIDGRELTVAKEAARTKPVKPTV*
Ga0157374_1076221513300013296Miscanthus RhizospherePWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKETSDELSAIAMRYAVIDGRELTVAKEAARTRPVKPTA*
Ga0157378_1205750923300013297Miscanthus RhizosphereRNAIFMPWVSIVLTTFWTRMLYADDPATLDATLGKAAREASDELSAIALRYAVIDRRELAVAKEAARTRPVKPMI*
Ga0157372_1064959823300013307Corn RhizosphereVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIAMRYAVIDGKELSVAKEAARTRPKLGA*
Ga0120158_1006773913300013772PermafrostPLVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIAMRYAAIDGKELSVAKQAARTHPVKP*
Ga0132256_10242838413300015372Arabidopsis RhizospherePSAALERNAIFMPWVSIVLTTFWTRLLYLHDEATLDAKLGHAAKEASDELSAIALRYAVIDGKELAVAKQAARTHP*
Ga0182034_1058010913300016371SoilALERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAREASDELSAIALRYAAIDGKELTVAKQAARTHPVRPT
Ga0187809_1027766823300017937Freshwater SedimentLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTRPTKPV
Ga0206356_1006669513300020070Corn, Switchgrass And Miscanthus RhizosphereLERNAIFMPWVSIVLTTFWTRLLYLDDAATLDAKLGHAAKEASEELSAIALRYAVIDGKELTVAKQAARTHVT
Ga0206354_1014466913300020081Corn, Switchgrass And Miscanthus RhizosphereNAIFMPWVSIVLTTFWTRLLYLDDAATLDAKLGHAAKEASDELSAIALRYAVIDGKELAVARQAARTHP
Ga0206353_1025100023300020082Corn, Switchgrass And Miscanthus RhizosphereLDDPETLDAKLGHAAKEASDELSAIAMRYAMIDGRELTVAKEAARTKPVKPMT
Ga0206353_1029865523300020082Corn, Switchgrass And Miscanthus RhizosphereLERNAIFMPWVSIVLTTFWTRLMYLDDPKTLDEQLGKAAREASDELSAIAARYTAIDLHELTVAKEASRTHPAIPH
Ga0213874_1023904623300021377Plant RootsAIFMPWVSIVLTTFWTRLLYLDDEATLDQKLGHAAKEASDELSAIAMRYAVIDGRELAVAKQAARTHPVRPGT
Ga0210397_1103422613300021403SoilLLYLDDSATLDAQLGRAAKEASDELSAIAMRYAVIDGRELAVAKQASRTHPVKPGA
Ga0247670_103629823300024283SoilERNAIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIAMRYAVIDGRELTVAKEAARTKPVKVGA
Ga0207692_1036027423300025898Corn, Switchgrass And Miscanthus RhizosphereVAFFVQRPSAALQRNAIFMPWVSIVLTTFWTRMLYLDDPATLDAKLGKAAKEASEELSAIAMRYAVIDGKELTVAKEAARTRPTVPKS
Ga0207647_1032105023300025904Corn RhizosphereIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVA
Ga0207660_1129252223300025917Corn RhizosphereRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELSVAKEASRTRPAKPL
Ga0207646_1182193423300025922Corn, Switchgrass And Miscanthus RhizosphereFFIQRPSAALERNAIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGKAAKDASDELSAIALRYAVIDGRELAVAKEAARTRPVKPTP
Ga0207687_1032569713300025927Miscanthus RhizosphereMLYLDDPETLDAKLGKAAKDASEELSAIAMRYAVIDGKELTVAKEAARTRPTVPKI
Ga0207700_1053384123300025928Corn, Switchgrass And Miscanthus RhizosphereFWTRLLYIDDPETLHVKLGQAAKEASDELSAIALRYAVIDGKELTVAKEAARTRPVKPAS
Ga0207664_1084048413300025929Agricultural SoilSAALERNAIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTHPVKPTS
Ga0207639_1209681513300026041Corn RhizosphereAIFMPWVSIVLTTFWTRLLYLDDAATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVT
Ga0207702_1107104013300026078Corn RhizosphereALERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVA
Ga0207698_1033839823300026142Corn RhizosphereERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELSVAKEASRTRPAKPL
Ga0209903_107012523300026216SoilMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIALRYAAIDGRELSVAKQAARTHPIKG
Ga0209847_110366023300026276Permafrost SoilPSAALERNAIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIALRYAAIDGRELSVAKQAARTHPIKG
Ga0209577_1004807533300026552SoilQRPSAALERNAIFMPWVSIVLTTFWTRLLYIDDPDTLHVKLGQAAKEASDELSAIALRYAVIDGKELTVAKEAARTRPVKPTA
Ga0209060_1036513723300027826Surface SoilFWTRLLYLDDEATLDQKLGHAAKEASEELRAIAMRYAVIDGKELAVAKQAARTHPTFKAS
Ga0209465_1043745133300027874Tropical Forest SoilMPWVSIVLTTFWTRMLYLDDPATLDAQLGRAAKEASEELSAIALRYAVIDGKELAVAKEAARTHPVTRGV
Ga0307309_1019420413300028714SoilFWTRLLYLDDPETLDAKLGRAAKEASDELSAIAMRYAVIDGKELSVAKEASRTRPKLGA
Ga0307312_1069628723300028828SoilPSAALERNAIFMPWVSIVLTTFWTRLLYLDDPETLDAKLGHAAKEASDELSAIAMRYAVIDGRELTVAKEAARTKPVIKPTA
Ga0265332_1048434423300031238RhizosphereERNAIFMPWVSIVLTTFWTRMLYLDDPETLDVKLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTHPVKPTV
Ga0265320_1056042013300031240RhizosphereNAIFMPWVSIVLTTFWTRLLYMDDPATVDAQLGKAAKEASAELDAIAARYAQIDGRELAVARDAARTRPRPAAS
Ga0265327_1036799223300031251RhizosphereRLLYLDDPETLDVKLGHAAKEASDELSAIALRYAVIDGKELAVAKEAAHTHPVKPTV
Ga0170820_1172037813300031446Forest SoilTRMLYLDDPATLDAKLGKAAKDASEELSAIAMRYAVIDGKELTVAKEAARTRPTVPKS
Ga0318573_1039949523300031564SoilALERNAIYMPWVSVVLTTFWTRLLYLDDPATLDQKLGRAAKEASDELSTIAMRYAQIDSRELSVAKEAAHTRPITRAEPAPSTGTAAS
Ga0318555_1020513223300031640SoilLERNAIFMPWVSIVLTTFWTRMLYLDDPATLDAKLGHAAREASDELSAIALRYAAIDGKELTVAKQAARTHPVKPS
Ga0318560_1040303313300031682SoilMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAREASDELSAIALRYAAIDGKELTVAKQAARTHPVRPT
Ga0265342_1020219423300031712RhizosphereTRMLYLDDPETLDVKLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTHPVKPTV
Ga0318552_1049839113300031782SoilLTTFWTRLLYLDDPATLDAKLGHAAREASDELSAIALRYAAIDGKELTVAKQAARTHPVRPT
Ga0318565_1045655313300031799SoilVSIVLTTFWTRMLYLDDPDTLDAKLGHAAREASDELSAIALRYAAIDGKELTVAKQAARTHPVKPG
Ga0318567_1045965313300031821SoilPSAALERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAREASDELSAIALRYAAIDGKELTVAKQAARTHPVRPT
Ga0318527_1018723723300031859SoilSAALERNAIFMPWVSIVLTTFWTRLLYLDDPATLDAKLGHAAREASDELSAIALRYAAIDGKELTVAKQAARTHPVRPT
Ga0318551_1058670313300031896SoilFWTRLLYLDDPATLDAKLGHAAREASDELSAIALRYAAIDGKELTVAKQAARTHPVRPT
Ga0308175_10125014913300031938SoilVLTTFWTRLLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELTVAKQAARTHVA
Ga0308175_10159394113300031938SoilLDDPATLDAKLGHATKEASEELSAIAMRYAVIDGKELAVAKQAARTHPVKAS
Ga0308174_1018309123300031939SoilAIFMPWVSIVLTTFWTRMLYLDDPATLDAKLGKAAKDASDELSAIAMRYAVIDGKELTVAKEAARTRPTIPKT
Ga0308176_1061649823300031996SoilTRMLYLDDPATLDAKLGKAAKDASDELSAIAMRYAVIDGKELTVAKEAARTRPTIPKT
Ga0308176_1293156023300031996SoilSAALERNAIFMPWVSIVLTTFWTRLLYLDDAATLDAKLGHAAKEASEELSAIALRYAVIDGKELTVAKQAARTHVT
Ga0318570_1036692313300032054SoilDDPATLDAKLGHAAREASDELSAIALRYAAIDGKELTVAKQAARTHPVRPT
Ga0308173_1099904313300032074SoilIILTTFWTRLLYLDDPETLDAKLGHATKEASEELSAIAMRYAVIDGKELAVAKQAARTHPVRPGA
Ga0308173_1162714523300032074SoilLYLDDEKTLDVQLAKAAKQASDELSAIAMRYAVIDGKELSVAKEAARTHPVKPGS
Ga0335078_1118662513300032805SoilMPWVSIVLTTFWTRLLYLDDPATLDAQLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTRPTRAV
Ga0335071_1031444913300032897SoilDDPETLDAKLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTKPTRAV
Ga0335071_1109245223300032897SoilLLYLDDPETLDAKLGHAAKEASDELSAIALRYAVIDGKELAVAKEAARTRPTKPA
Ga0335083_1079665013300032954SoilMLYLDDPATLDAKLGHAAKEASDELSAIALRYAVIDGKELSLAKDAARTHPVKAS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.