Metagenome / Metatranscriptome Family F059183

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059183
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	42 residues
Representative Sequence	MTPAEIRALAAEAIAHLHEVAGKLAELSALLGGDEAGEGKP
Number of Associated Samples	107
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	9.70 %
% of genes near scaffold ends (potentially truncated)	91.04 %
% of genes from short scaffolds (< 2000 bps)	95.52 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.731 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.492 % of family members)
Environment Ontology (ENVO)	Unclassified (55.970 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (51.493 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.48% β-sheet: 0.00% Coil/Unstructured: 56.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00486	Trans_reg_C	4.48
PF00196	GerE	2.24
PF13556	HTH_30	2.24
PF13613	HTH_Tnp_4	2.24
PF13520	AA_permease_2	2.24
PF10009	DUF2252	2.24
PF09860	DUF2087	1.49
PF03176	MMPL	1.49
PF07883	Cupin_2	1.49
PF02129	Peptidase_S15	0.75
PF13076	Fur_reg_FbpA	0.75
PF05175	MTS	0.75
PF03241	HpaB	0.75
PF03721	UDPG_MGDP_dh_N	0.75
PF00324	AA_permease	0.75
PF00296	Bac_luciferase	0.75
PF11774	Lsr2	0.75
PF13683	rve_3	0.75
PF02738	MoCoBD_1	0.75
PF12697	Abhydrolase_6	0.75
PF08530	PepX_C	0.75
PF13193	AMP-binding_C	0.75
PF01471	PG_binding_1	0.75
PF09335	SNARE_assoc	0.75
PF04286	DUF445	0.75
PF13565	HTH_32	0.75
PF02481	DNA_processg_A	0.75
PF14019	DUF4235	0.75
PF00155	Aminotran_1_2	0.75
PF14016	DUF4232	0.75
PF06736	TMEM175	0.75
PF02909	TetR_C_1	0.75
PF14833	NAD_binding_11	0.75
PF00092	VWA	0.75
PF00072	Response_reg	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.49
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	1.49
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	1.49
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.75
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	0.75
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.75
COG2936	Predicted acyl esterase	General function prediction only [R]	0.75
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	0.75
COG2368	Aromatic ring hydroxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.75
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.75
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.75
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.75
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.75
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.75
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.75
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.75
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.75
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.75
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.73 %
All Organisms	root	All Organisms	46.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.73 %
cellular organisms	root	All Organisms → cellular organisms	46.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.31 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.73 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.99 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.49 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.49 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.75 %
Glycomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales	0.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.99 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.75 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.75 %
Glycomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	0.75 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.75 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.75 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.99 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.75 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.75 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.75 %
Stackebrandtia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Stackebrandtia	0.75 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.75 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.99 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.75 %
Stackebrandtia endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Stackebrandtia → Stackebrandtia endophytica	0.75 %
Geodermatophilus nigrescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus nigrescens	0.75 %
Pseudonocardia ammonioxydans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia ammonioxydans	0.75 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.75 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN02HIFL9	Not Available	500	Open in IMG/M
3300000956\|JGI10216J12902_105629206	Not Available	959	Open in IMG/M
3300005177\|Ga0066690_10361534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Stackebrandtia → Stackebrandtia endophytica	984	Open in IMG/M
3300005177\|Ga0066690_10776480	Not Available	625	Open in IMG/M
3300005434\|Ga0070709_11057725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300005445\|Ga0070708_102207585	Not Available	508	Open in IMG/M
3300005549\|Ga0070704_101040901	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300005614\|Ga0068856_102008024	Not Available	589	Open in IMG/M
3300005764\|Ga0066903_108008094	Not Available	542	Open in IMG/M
3300006175\|Ga0070712_101776144	Not Available	540	Open in IMG/M
3300006755\|Ga0079222_12393225	Not Available	529	Open in IMG/M
3300006796\|Ga0066665_11519100	Not Available	523	Open in IMG/M
3300006852\|Ga0075433_11849322	Not Available	518	Open in IMG/M
3300006854\|Ga0075425_101041291	Not Available	933	Open in IMG/M
3300006914\|Ga0075436_101080437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300006954\|Ga0079219_11178042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300009098\|Ga0105245_10660803	Not Available	1076	Open in IMG/M
3300010046\|Ga0126384_10313125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1295	Open in IMG/M
3300010048\|Ga0126373_10696053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia ammonioxydans	1074	Open in IMG/M
3300010048\|Ga0126373_12084513	Not Available	629	Open in IMG/M
3300010048\|Ga0126373_12791752	Not Available	545	Open in IMG/M
3300010358\|Ga0126370_11387769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300010361\|Ga0126378_10635915	Not Available	1181	Open in IMG/M
3300010361\|Ga0126378_10935369	Not Available	972	Open in IMG/M
3300010366\|Ga0126379_10330055	Not Available	1546	Open in IMG/M
3300010373\|Ga0134128_11157284	Not Available	854	Open in IMG/M
3300012209\|Ga0137379_11348965	Not Available	618	Open in IMG/M
3300012958\|Ga0164299_11231101	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012971\|Ga0126369_12721292	Not Available	578	Open in IMG/M
3300012971\|Ga0126369_13232884	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300012984\|Ga0164309_10665908	Not Available	821	Open in IMG/M
3300015372\|Ga0132256_102220905	Not Available	653	Open in IMG/M
3300015372\|Ga0132256_103664488	Not Available	517	Open in IMG/M
3300015374\|Ga0132255_103709792	Not Available	649	Open in IMG/M
3300016319\|Ga0182033_10034444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3275	Open in IMG/M
3300016404\|Ga0182037_11531272	Not Available	592	Open in IMG/M
3300016404\|Ga0182037_11573798	Not Available	584	Open in IMG/M
3300016404\|Ga0182037_12119793	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300017926\|Ga0187807_1074033	Not Available	1062	Open in IMG/M
3300017937\|Ga0187809_10351860	Not Available	552	Open in IMG/M
3300017939\|Ga0187775_10382521	Not Available	577	Open in IMG/M
3300017942\|Ga0187808_10105534	Not Available	1227	Open in IMG/M
3300017943\|Ga0187819_10617891	Not Available	613	Open in IMG/M
3300017947\|Ga0187785_10764344	Not Available	511	Open in IMG/M
3300017955\|Ga0187817_10258769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1109	Open in IMG/M
3300017970\|Ga0187783_10325250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1120	Open in IMG/M
3300017975\|Ga0187782_10351870	Not Available	1115	Open in IMG/M
3300018060\|Ga0187765_10860420	Not Available	610	Open in IMG/M
3300018062\|Ga0187784_10907408	Not Available	701	Open in IMG/M
3300018064\|Ga0187773_10952413	Not Available	559	Open in IMG/M
3300018085\|Ga0187772_10139584	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300018085\|Ga0187772_11028739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300021170\|Ga0210400_10064131	All Organisms → cellular organisms → Bacteria	2868	Open in IMG/M
3300021474\|Ga0210390_11102140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300021560\|Ga0126371_11598584	Not Available	778	Open in IMG/M
3300021560\|Ga0126371_13808482	Not Available	508	Open in IMG/M
3300022525\|Ga0242656_1132242	Not Available	514	Open in IMG/M
3300025898\|Ga0207692_10957555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300025910\|Ga0207684_11217669	Not Available	623	Open in IMG/M
3300026078\|Ga0207702_12066655	Not Available	560	Open in IMG/M
3300031543\|Ga0318516_10343350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300031544\|Ga0318534_10620733	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031545\|Ga0318541_10026682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2825	Open in IMG/M
3300031546\|Ga0318538_10027021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2636	Open in IMG/M
3300031564\|Ga0318573_10452266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300031572\|Ga0318515_10544804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300031573\|Ga0310915_10321626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1095	Open in IMG/M
3300031640\|Ga0318555_10126859	Not Available	1358	Open in IMG/M
3300031640\|Ga0318555_10316623	Not Available	845	Open in IMG/M
3300031680\|Ga0318574_10164092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1266	Open in IMG/M
3300031680\|Ga0318574_10219505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1095	Open in IMG/M
3300031682\|Ga0318560_10407305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300031682\|Ga0318560_10631730	Not Available	580	Open in IMG/M
3300031713\|Ga0318496_10742714	Not Available	541	Open in IMG/M
3300031724\|Ga0318500_10176002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300031724\|Ga0318500_10747890	Not Available	500	Open in IMG/M
3300031751\|Ga0318494_10930420	Not Available	510	Open in IMG/M
3300031771\|Ga0318546_10465542	Not Available	886	Open in IMG/M
3300031771\|Ga0318546_10589232	Not Available	782	Open in IMG/M
3300031771\|Ga0318546_10697369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300031779\|Ga0318566_10339490	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300031779\|Ga0318566_10440109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300031780\|Ga0318508_1177320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300031782\|Ga0318552_10058499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1841	Open in IMG/M
3300031782\|Ga0318552_10142889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1200	Open in IMG/M
3300031782\|Ga0318552_10241263	Not Available	917	Open in IMG/M
3300031792\|Ga0318529_10137933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1117	Open in IMG/M
3300031793\|Ga0318548_10286686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	809	Open in IMG/M
3300031793\|Ga0318548_10390946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	682	Open in IMG/M
3300031797\|Ga0318550_10104946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1335	Open in IMG/M
3300031798\|Ga0318523_10650652	Not Available	518	Open in IMG/M
3300031805\|Ga0318497_10792792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300031821\|Ga0318567_10425298	Not Available	753	Open in IMG/M
3300031832\|Ga0318499_10279464	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300031835\|Ga0318517_10535740	Not Available	527	Open in IMG/M
3300031845\|Ga0318511_10485280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus nigrescens	571	Open in IMG/M
3300031860\|Ga0318495_10423221	Not Available	585	Open in IMG/M
3300031879\|Ga0306919_10888804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	683	Open in IMG/M
3300031894\|Ga0318522_10094769	Not Available	1101	Open in IMG/M
3300031896\|Ga0318551_10744776	Not Available	569	Open in IMG/M
3300031896\|Ga0318551_10895040	Not Available	518	Open in IMG/M
3300031897\|Ga0318520_10794374	Not Available	594	Open in IMG/M
3300031912\|Ga0306921_12166133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300031912\|Ga0306921_12490005	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300031941\|Ga0310912_10457300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	995	Open in IMG/M
3300031942\|Ga0310916_10427938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300031945\|Ga0310913_11106609	Not Available	553	Open in IMG/M
3300031946\|Ga0310910_11062581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	631	Open in IMG/M
3300031947\|Ga0310909_10794071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	782	Open in IMG/M
3300031947\|Ga0310909_11243688	Not Available	601	Open in IMG/M
3300031947\|Ga0310909_11449055	Not Available	548	Open in IMG/M
3300031959\|Ga0318530_10135782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	994	Open in IMG/M
3300031981\|Ga0318531_10218566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300032010\|Ga0318569_10033134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2163	Open in IMG/M
3300032025\|Ga0318507_10216934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	827	Open in IMG/M
3300032035\|Ga0310911_10395152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300032039\|Ga0318559_10459269	Not Available	594	Open in IMG/M
3300032043\|Ga0318556_10054937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1936	Open in IMG/M
3300032043\|Ga0318556_10593453	Not Available	578	Open in IMG/M
3300032052\|Ga0318506_10486568	Not Available	547	Open in IMG/M
3300032055\|Ga0318575_10291050	Not Available	826	Open in IMG/M
3300032055\|Ga0318575_10657578	Not Available	530	Open in IMG/M
3300032059\|Ga0318533_10202343	Not Available	1423	Open in IMG/M
3300032063\|Ga0318504_10157917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1047	Open in IMG/M
3300032065\|Ga0318513_10464938	Not Available	619	Open in IMG/M
3300032065\|Ga0318513_10537923	Not Available	572	Open in IMG/M
3300032067\|Ga0318524_10056756	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1876	Open in IMG/M
3300032068\|Ga0318553_10417168	Not Available	703	Open in IMG/M
3300032076\|Ga0306924_10819481	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300032174\|Ga0307470_11426818	Not Available	572	Open in IMG/M
3300032261\|Ga0306920_101246437	Not Available	1072	Open in IMG/M
3300032805\|Ga0335078_10450385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1671	Open in IMG/M
3300032896\|Ga0335075_10087444	All Organisms → cellular organisms → Bacteria	4143	Open in IMG/M
3300033290\|Ga0318519_10448100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.28%
Host-Associated	Host-Associated	6.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.55%
Plants	Host-Associated → Plants	6.72%
Aquatic	Environmental → Aquatic	3.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.48%
Freshwater	Environmental → Aquatic → Freshwater	3.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.24%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.21%
Loam	Environmental → Terrestrial → Soil → Loam	5.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_07906790	2170459013	Grass Soil	MTPAEIRALAAEAIAHLHEVAGKLAELSALLGGDEAGEGKP
JGI10216J12902_1056292061	3300000956	Soil	EIRALAAESIASLHEVAGKLADLSALLDDEAGEGRS*
Ga0066690_103615343	3300005177	Soil	MTSAEIRALAAESIASLQEVAGKLADLSALLDDEAAEGGS
Ga0066690_107764801	3300005177	Soil	MTSAEIRALAAESIASLQEVAGKLADLSALLDDEAAEGGS*
Ga0070709_110577253	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTPAEIRALAAEAITHLHEVADRLAELSALLGEDKPLGEDKP*
Ga0070708_1022075851	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LAKPRQTMTPAEIRALAAEAIAHLHEVAGQLAELSALLGDDEAGEDKP*
Ga0070704_1010409011	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	PAEIRALAAEAIAHLHEVAGQLAELSALLGDDEAGEDKP*
Ga0068856_1020080241	3300005614	Corn Rhizosphere	AEIRALAAEAIAHLHEVAGKLAELSALLGGGEAGGGKP*
Ga0066903_1080080941	3300005764	Tropical Forest Soil	EIRALAAEAIANLREVADKLAELSTLLGDDEAGEDRS*
Ga0070712_1017761441	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RALAAESIASLHEVAGKLAELSALVDDEAGEGRS*
Ga0079222_123932251	3300006755	Agricultural Soil	ALAAEAITQLHKVADRIAELSVLLADDAAGEGKP*
Ga0066665_115191001	3300006796	Soil	RARSAAAIASLHEVAGQLTELSALLDDEAGEGTS*
Ga0075433_118493221	3300006852	Populus Rhizosphere	ALVTPRQTMTPAEIRALAAEAIAHLHEVAGKLAELSALLGAGEAGEGKP*
Ga0075425_1010412911	3300006854	Populus Rhizosphere	EPRRTMTPAEIRALAAESIASLQEVAGKLAELSALLDDDEGGEGRS*
Ga0075436_1010804371	3300006914	Populus Rhizosphere	MTPAEIRALAAEAIAHLHEVAGKLAELSALLGEDTP*
Ga0079219_111780421	3300006954	Agricultural Soil	TEAEIRALTAEAIAHLHEVADRLTELSALLGEEGSHERA*
Ga0105245_106608031	3300009098	Miscanthus Rhizosphere	QTMTPAEIRALAAEAIAHLHEVAGQLAELSALLGDDEAGEDKP*
Ga0126384_103131253	3300010046	Tropical Forest Soil	LAEQAIAHLHEVAGKLAELSALLGGDQATGAGHERA*
Ga0126373_106960531	3300010048	Tropical Forest Soil	MTPAEIRALAAESIAGLHEVAGKLAELAALLGDDEAGEGLS*
Ga0126373_120845131	3300010048	Tropical Forest Soil	ALAEEAIAHLHEVAGKLAELSALLGDDEASQGKP*
Ga0126373_127917521	3300010048	Tropical Forest Soil	MTSAEIRALAVESIASLHEVAGKLAELSALLGDEAGEGRS*
Ga0126370_113877693	3300010358	Tropical Forest Soil	TLTPVEIRALAAEAIAHLHKVAAKLTELSALLSDDAPGEAQP*
Ga0126378_106359151	3300010361	Tropical Forest Soil	MTPAEIRALAAEAIAHLHEVAGQLAELSALLGDDEADEGQP*
Ga0126378_109353691	3300010361	Tropical Forest Soil	PAEIRALAGEAITHLQEVAGKLAELSALLGDDKTGQDES*
Ga0126379_103300551	3300010366	Tropical Forest Soil	PAEIRALAEESIASLHEVAGKLAELSALLGDDEAGEGRS*
Ga0134128_111572843	3300010373	Terrestrial Soil	AEIRTLTTEAIAHLHEVADKLAKLSALLADDEPSEGQP*
Ga0137379_113489651	3300012209	Vadose Zone Soil	TPAEIRALAAESIASLHEVAGKLADLSALLDDEAAEGGS*
Ga0164299_112311011	3300012958	Soil	MSPAEIRSLAAEAIAYLHEVADKLTELSALLGDHEAGDDKP*
Ga0126369_127212921	3300012971	Tropical Forest Soil	LARPRATMTPAEIRALAEETIARLHEVADKLAELSTLLGDDQAAEGKP*
Ga0126369_132328842	3300012971	Tropical Forest Soil	MTTAEIRALTAEAITHLHKVADKLAELSALLADDGTGKGKP*
Ga0164309_106659081	3300012984	Soil	IRALAAEAITHLHEVAGKLAELSALLGDDEAGEASHERT*
Ga0132256_1022209051	3300015372	Arabidopsis Rhizosphere	IRALAAEAIAHLHEVAGQLAELSALLGDDEAGEDKP*
Ga0132256_1036644881	3300015372	Arabidopsis Rhizosphere	GRTMTPAEIRVLAAESIASLHEVAGKLAELSALLDDEAGEGRS*
Ga0132255_1037097921	3300015374	Arabidopsis Rhizosphere	RRTMTPAEIRALAAESIASLQEVAGKLAELSALLDDDEAGEDRP*
Ga0182033_100344443	3300016319	Soil	MTPAEIRARAADTIAQLHAVAGKLAELSALLGDDEDRS
Ga0182037_115312721	3300016404	Soil	PAEIRVLAAEAIAQLHEVAGKLTELSALLGAGEAGEDQA
Ga0182037_115737983	3300016404	Soil	RALAAESIASLHAVAGQLAELSALLGEDEAGEGQS
Ga0182037_121197931	3300016404	Soil	AMTPAEIRARATEAIAQLHEVADKLAELSALLGDDAAGGGAS
Ga0187807_10740332	3300017926	Freshwater Sediment	MTPAEIRAMTAEAIAHLHEVAVKLAELSALLGDDEADEGTP
Ga0187809_103518603	3300017937	Freshwater Sediment	MTPAEIRALTAEAIAHLHEVADKLSELSALLGDDEAGEDKP
Ga0187775_103825211	3300017939	Tropical Peatland	TMTPAEIRTLAAEAIAHLRKVADNLAQLAALLGDDETGEGKP
Ga0187808_101055342	3300017942	Freshwater Sediment	GGRRPGQAEETMTPAEIRALTAEAIAHLYEVAAKLAELSALLGDDEADEGTP
Ga0187819_106178911	3300017943	Freshwater Sediment	MTPAGIRALTAEAIAHLYEVAAKLAELSALLGDDEADEGTP
Ga0187785_107643442	3300017947	Tropical Peatland	MTPAEIRALAEEAIVHLHQVADNLAQLAALLGDDETGEGKP
Ga0187817_102587691	3300017955	Freshwater Sediment	MTPAEIRVLAAAAIAHLHEVADRLAELSALLGEDEASEDKS
Ga0187783_103252503	3300017970	Tropical Peatland	AEIRALAAAAIAHLHEVAGQLTELSALLGDDEAGEDKR
Ga0187782_103518701	3300017975	Tropical Peatland	KPRETMTSAEIRALAADTIAQLHEVAGKLAELSALLGDDEPGRDAS
Ga0187765_108604203	3300018060	Tropical Peatland	MSPAEIRALAAEAIGYPHEVADKLAELSALLGEDKAGDGKP
Ga0187784_109074081	3300018062	Tropical Peatland	ALAKPRETLTPAEIRALAAAAIIHLQEVADKLTELSALLGDDEAIEGRS
Ga0187773_109524133	3300018064	Tropical Peatland	PRETMTPAEIRALAEEAIAHLHEVAGKLAKLSALLGGDESDEGKP
Ga0187772_101395843	3300018085	Tropical Peatland	LTPAEIRALAAAAIVHLHEVGDKLTELPALLGDDDAVAGRS
Ga0187772_110287391	3300018085	Tropical Peatland	KPRRTMAPAEIRAVAAQAIAHLHEVAGQLAELSALLGDDEPGEDTR
Ga0210400_100641315	3300021170	Soil	RETITQAEIRALAAEAIAHLHEVADKLAELSALLGDDEAGEDKP
Ga0210390_111021401	3300021474	Soil	EIRSLAAEAIAHLHKVADELAELSALLGDDEASEDKP
Ga0126371_115985842	3300021560	Tropical Forest Soil	EIRALAAEAIAHLHEVAGKLAELSALLGDDEADGGKP
Ga0126371_138084823	3300021560	Tropical Forest Soil	KTMTPTEIRALAAEAITHLHKVADKLADLSALLSEDEGKP
Ga0242656_11322421	3300022525	Soil	QAEIRALAAEAIAHLHEVADKLAELSALLGDDEAGEDKP
Ga0207692_109575551	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RESMTPAEIRALAAEAIAHLHEVAGKLAELSALLGEDTP
Ga0207684_112176692	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RETMTPAEIRALAAEAITHMHEVAGKLAELSALLGDDEAGEDKP
Ga0207702_120666551	3300026078	Corn Rhizosphere	ATQNPTMTPAEIRALAAEAIAHLHEVAGKLAELSALLGGGEAGGGKP
Ga0318516_103433501	3300031543	Soil	PAEIRALTAESITSLHEVAGKLAELSALLGDDEAGEGTS
Ga0318534_106207333	3300031544	Soil	AKPRKAMTPAEIRARAAEAIIHLREVAAKMAELSALLGDDAAGGGAS
Ga0318541_100266821	3300031545	Soil	RALAEETIAHLHEVAGKLAELSALLGDDQAAEAKP
Ga0318538_100270211	3300031546	Soil	REAMTPAEIRALAAEAIIHLHEVAGKLAELSALLSDDKASEGKS
Ga0318573_104522662	3300031564	Soil	ALAKPKKTLTAAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0318515_105448042	3300031572	Soil	PKKTLTSAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0310915_103216263	3300031573	Soil	RKTMTPAEIRARAAEAIIHLREVAAQIAELSALLGDDAVGEGKS
Ga0318555_101268593	3300031640	Soil	TRTLPPAEIRALAAEAIAHLHKVADKLTELSALLGDDQASEGRP
Ga0318555_103166233	3300031640	Soil	TMTPAEIRALAAESIASLHEVAGKLAELSALLGDDEAGEGRS
Ga0318574_101640923	3300031680	Soil	ALARPRKTMTPAEIRALAAEAIAHLHKVADKLAELSALLPDPEPGEGKP
Ga0318574_102195055	3300031680	Soil	AKPRKTMTPAEIRARAAEAIIHLREVAAQIAELSALLGDDAVGEGKS
Ga0318560_104073053	3300031682	Soil	TEIRALAAESIASLHEVAGKLVELSALLDDDEGGEAT
Ga0318560_106317301	3300031682	Soil	RITMTPAEIRALAAEAIAHLHEVADKLAELSALVGDDQGGEDKS
Ga0318496_107427142	3300031713	Soil	RETMTPAEIRALAAETIAHLHKVADKLAELSALLADDEPGEGKP
Ga0318500_101760024	3300031724	Soil	ASALARPRKTMTPAEIRALAAEAIAHLHKVADKLAELSALLPDPEPGEGKP
Ga0318500_107478901	3300031724	Soil	PRKTMTPTEIRALAAEAITHLHKVADKLTELSALLDDHPGEGKP
Ga0318494_109304202	3300031751	Soil	TMTPAEIRALAAESIASLHEVAGKLAELSALLGDDQAGEGRS
Ga0318546_104655423	3300031771	Soil	PAEIRALAADAIGQLHEAAGKLAELSALLGGDEAGEGTP
Ga0318546_105892321	3300031771	Soil	AEIRAVADEAIAHLRDVADRLAELSALLGDDEADGGKP
Ga0318546_106973692	3300031771	Soil	AALAEPKKTLTAAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0318566_103394903	3300031779	Soil	TTTPAQIRALAAEAVAQLHEVAAKLTELSALLGDDQADEGKP
Ga0318566_104401092	3300031779	Soil	EAAALAKPKKTLTAAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0318508_11773201	3300031780	Soil	KKTLTPAEIRALATEAITHLHKVAAKLTELSALLGDDQPGEAQP
Ga0318552_100584993	3300031782	Soil	KPRDTMTPADIRALAAEAIAHLREVAGKLAELSALLGDGEADEGKS
Ga0318552_101428894	3300031782	Soil	MTPAEIRALAAEAIAQLHEVAGKLTELSALLGADKAGEDQA
Ga0318552_102412631	3300031782	Soil	EIRALAAEAIAHLHKVADKLTELSALLGDDQASEGRP
Ga0318529_101379331	3300031792	Soil	AEIRARAAEAIAHLHEVATKLAELSALLGDDEDKS
Ga0318548_102866863	3300031793	Soil	ALARPRESMTPAEIRAVAADAIAHLQEVAGKLGELSALLGDGEASEGKS
Ga0318548_103909462	3300031793	Soil	MTPAEIRALAAEAIGHLHEVADKLAELSALVGDDQGGEDKS
Ga0318550_101049463	3300031797	Soil	AARPRKTMTPAEIRALAAEAIAHLHKVADKLAELSALLPDPEPGEGKP
Ga0318523_106506521	3300031798	Soil	MTPAEIRAVAADAIAHLQEVAGKLGELSALLGDGEASEGKS
Ga0318497_107927921	3300031805	Soil	DIRVLAAQAIAHLQEVAGKLAELSALLGDEAGEATP
Ga0318567_104252981	3300031821	Soil	AEIRALAAEAIAHLHKVADKLTELSALLGDDQASEGRP
Ga0318499_102794643	3300031832	Soil	AEIRARATEAKAQLHEVADKLAELSALLGDDAAGGGAS
Ga0318517_105357401	3300031835	Soil	ALAKPRKAMAPAEIRAVAEEAIANLHEVAGQLAELSALLGDDEADGGKP
Ga0318511_104852801	3300031845	Soil	PAEIRALAADSIASLHEVADKLAELTALLDNEAGEDGS
Ga0318495_104232213	3300031860	Soil	TTALARPRATMTPAEIRALAEETIAHLHEVAAKLAELSALLGDDQAGEAKP
Ga0306919_108888043	3300031879	Soil	TAAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0318522_100947693	3300031894	Soil	EIRALAAEAIDHLHEVADKLAELSALLGDGHGGEDRS
Ga0318551_107447762	3300031896	Soil	RPRKTMTPAEIRALAAESIASLNEVAGKLAELSALLGDEGAS
Ga0318551_108950401	3300031896	Soil	AKTTRTLPPAEIRALAAEAIAHLHKVADKLTELSALLGDDQASEGRP
Ga0318520_107943741	3300031897	Soil	SVLARPRKTMTPAEIRALAAEAIANLHKVADKLAELSALLPDNDPGEGKP
Ga0306921_121661333	3300031912	Soil	RKNMSPAEIRALTAESITSLHEVASKLAELSALLGDDEVGEGTS
Ga0306921_124900053	3300031912	Soil	TLTPAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQL
Ga0310912_104573003	3300031941	Soil	ALAKPKKTRTPAEIRALAAEAIAHLHKVAAKLTELSALLGDDQAEAGQP
Ga0310916_104279381	3300031942	Soil	AKPKKTLTAAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0310913_111066093	3300031945	Soil	PRQTMTPAEIRALAAEAIAQLHEVAGKLTELSALLGAGEAGEDQA
Ga0310910_110625813	3300031946	Soil	MTPAEIRALAAEAIAHLHKVADKLAELSALLPDPEPGEGKP
Ga0310909_107940711	3300031947	Soil	KTLTPAEIRALATEAITHLHKVAAKLTELSALLGDDQPGEAQP
Ga0310909_112436883	3300031947	Soil	SQAGETMTPAEIRALAAEAITHLHEVADKLTELSALLGNDEAGRASHERAR
Ga0310909_114490552	3300031947	Soil	MTPAEIRALAAESIASLHEVAGKLAELSALLGDDEAGEGRS
Ga0318530_101357821	3300031959	Soil	AAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0318531_102185661	3300031981	Soil	AGALARPRETMTPAEIRALAAETIAHLHKVADKLAELSALLADDEPGEGKP
Ga0318569_100331341	3300032010	Soil	LAKPKKTLTAAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0318507_102169341	3300032025	Soil	KKTLTAAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0310911_103951523	3300032035	Soil	EIRALAAEAIAHLHKVADKLAELSALLPDPEPGEGKP
Ga0318559_104592691	3300032039	Soil	PAEIRALAAESIASLQEVASKLAELSALLGDDQAGEGQP
Ga0318556_100549371	3300032043	Soil	QTMTPAEIRALAAEAIAQLHEVAGKLTELSALLGADKAGEDQA
Ga0318556_105934531	3300032043	Soil	EIRALATEAIAHLHEVAGKLAELSGLLGDDEPGEGQS
Ga0318506_104865684	3300032052	Soil	KTMTPAEIRALAAEAIAHLHKVADKLAELSALLPDPEPGEGKP
Ga0318575_102910503	3300032055	Soil	RTLPPAEIRALAAEAIAHLHKVADKLTELSALLGDDQASEGRP
Ga0318575_106575783	3300032055	Soil	ALARPRATMTPAEIRALAEETIAHLHEVAAKLAELSALLGDDQAGEAKP
Ga0318533_102023431	3300032059	Soil	AASSALATEAIAHLHEVAGKLAELSGLLGDDEPGEGQT
Ga0318504_101579174	3300032063	Soil	PRESMAPAEIRALAEEAIAHLHEVADKLAELSALLDDKADGGKP
Ga0318513_104649383	3300032065	Soil	DTMTPADIRALAAEAIAHLREVAGKLAELSALLGDGEADEGKS
Ga0318513_105379231	3300032065	Soil	LAKPRTTTTPAQIRALAAEAVAQLHEVAAKLTELSALLGDDQADEGKP
Ga0318524_100567561	3300032067	Soil	MTPAEIRARAAETIAQLHAVAGKLAELSALLGDDEDRS
Ga0318553_104171682	3300032068	Soil	MTPAEIRALAAEAIDHLHEVADKLAELSALLGDGHGGEDRS
Ga0306924_108194813	3300032076	Soil	PRKTMTPAEIRALAAEAIAHLHKVADKLAELSALLADGEPGEGKP
Ga0307470_114268183	3300032174	Hardwood Forest Soil	AEIRALAAEAIAHLHEVAGQLAELSALLGDDEAGEDKP
Ga0306920_1012464373	3300032261	Soil	IRALAAEAIAHLHEVTGKLTELSALLGGDEADEGTS
Ga0335078_104503851	3300032805	Soil	RETMTPAEIRALAAESIASLHEVACKLAELSALLDDDEASEGRP
Ga0335075_100874441	3300032896	Soil	PAEIRDLTDRTIGHLQEVASNLAELSALLGDDEAADDSEGRS
Ga0318519_104481001	3300033290	Soil	TRPRESMAPAEIRALAEEAIAHLHEVADKLAELSALLDDKADGGKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059183

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences