Metagenome / Metatranscriptome Family F059166

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059166
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	46 residues
Representative Sequence	LGLSLDTREVGRVTIVRCNGRIVAGSESESLRAHVAWLLRDRRAIV
Number of Associated Samples	116
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.23 %
% of genes near scaffold ends (potentially truncated)	98.51 %
% of genes from short scaffolds (< 2000 bps)	88.81 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.299 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.179 % of family members)
Environment Ontology (ENVO)	Unclassified (35.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.985 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.27% β-sheet: 18.92% Coil/Unstructured: 60.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF07478	Dala_Dala_lig_C	2.99
PF00069	Pkinase	2.99
PF01435	Peptidase_M48	2.99
PF12852	Cupin_6	2.24
PF04551	GcpE	2.24
PF00132	Hexapep	2.24
PF12833	HTH_18	1.49
PF13083	KH_4	1.49
PF00326	Peptidase_S9	1.49
PF00083	Sugar_tr	1.49
PF14026	DUF4242	1.49
PF01174	SNO	1.49
PF07690	MFS_1	1.49
PF02604	PhdYeFM_antitox	1.49
PF00072	Response_reg	1.49
PF07676	PD40	0.75
PF08282	Hydrolase_3	0.75
PF05198	IF3_N	0.75
PF01914	MarC	0.75
PF04095	NAPRTase	0.75
PF12697	Abhydrolase_6	0.75
PF03725	RNase_PH_C	0.75
PF08530	PepX_C	0.75
PF03949	Malic_M	0.75
PF01841	Transglut_core	0.75
PF01928	CYTH	0.75
PF10041	DUF2277	0.75
PF01479	S4	0.75
PF01551	Peptidase_M23	0.75
PF01850	PIN	0.75
PF01740	STAS	0.75
PF00886	Ribosomal_S16	0.75
PF02463	SMC_N	0.75
PF01494	FAD_binding_3	0.75
PF00561	Abhydrolase_1	0.75
PF00375	SDF	0.75
PF08494	DEAD_assoc	0.75
PF00829	Ribosomal_L21p	0.75
PF08281	Sigma70_r4_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.94
COG0821	4-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpE	Lipid transport and metabolism [I]	2.24
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.49
COG0311	Pyridoxal 5'-phosphate synthase subunit PdxT (glutamine amidotransferase)	Coenzyme transport and metabolism [H]	1.49
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.49
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.49
COG0118	Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH	Amino acid transport and metabolism [E]	1.49
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.75
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.75
COG2936	Predicted acyl esterase	General function prediction only [R]	0.75
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.75
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	0.75
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.75
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.75
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.75
COG1201	Lhr-like helicase	Replication, recombination and repair [L]	0.75
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	0.75
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	0.75
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.75
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.75
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.75
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.75
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.75
COG0290	Translation initiation factor IF-3	Translation, ribosomal structure and biogenesis [J]	0.75
COG0281	Malic enzyme	Energy production and conversion [C]	0.75
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	0.75
COG0228	Ribosomal protein S16	Translation, ribosomal structure and biogenesis [J]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.30 %
Unclassified	root	N/A	9.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.30 %
Unclassified	root	N/A	9.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.30 %
Unclassified	root	N/A	9.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.42 %
Unclassified	root	N/A	9.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.22 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	35.07 %
Unclassified	root	N/A	9.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.07 %
Unclassified	root	N/A	9.70 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.46 %
Holosporales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales	3.73 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.75 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.07 %
Unclassified	root	N/A	9.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.46 %
Candidatus Paracaedibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae	3.73 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.75 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.07 %
Unclassified	root	N/A	9.70 %
Candidatus Odyssella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella	3.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.75 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.75 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.75 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.07 %
Unclassified	root	N/A	9.70 %
unclassified Candidatus Odyssella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella	3.73 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.75 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.75 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.75 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.07 %
Unclassified	root	N/A	9.70 %
Candidatus Odyssella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	3.73 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.75 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.75 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.75 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10198133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300004082\|Ga0062384_101331730	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300004092\|Ga0062389_102248419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300004092\|Ga0062389_103831466	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	565	Open in IMG/M
3300005445\|Ga0070708_101648583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300005538\|Ga0070731_10279506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1108	Open in IMG/M
3300005538\|Ga0070731_10610059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	726	Open in IMG/M
3300005541\|Ga0070733_10034078	All Organisms → cellular organisms → Bacteria	3177	Open in IMG/M
3300005921\|Ga0070766_10795974	Not Available	644	Open in IMG/M
3300005950\|Ga0066787_10065866	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300005995\|Ga0066790_10018506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3051	Open in IMG/M
3300006028\|Ga0070717_12052503	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300006052\|Ga0075029_100119701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1597	Open in IMG/M
3300006176\|Ga0070765_100207276	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300006176\|Ga0070765_100554127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082	Open in IMG/M
3300006176\|Ga0070765_101258448	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300007788\|Ga0099795_10521970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300009038\|Ga0099829_11717734	Not Available	516	Open in IMG/M
3300009518\|Ga0116128_1117313	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300009520\|Ga0116214_1338784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300009521\|Ga0116222_1562363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300009522\|Ga0116218_1255664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300009523\|Ga0116221_1143156	Not Available	1043	Open in IMG/M
3300009638\|Ga0116113_1088796	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300009638\|Ga0116113_1113963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300009640\|Ga0116126_1048101	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300009683\|Ga0116224_10057072	All Organisms → cellular organisms → Bacteria → Acidobacteria	1904	Open in IMG/M
3300009759\|Ga0116101_1007674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1884	Open in IMG/M
3300009764\|Ga0116134_1311430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300009824\|Ga0116219_10273183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300010379\|Ga0136449_100825989	All Organisms → cellular organisms → Bacteria → Acidobacteria	1526	Open in IMG/M
3300010379\|Ga0136449_103022019	Not Available	656	Open in IMG/M
3300012208\|Ga0137376_10191182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1769	Open in IMG/M
3300012351\|Ga0137386_10666474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300012359\|Ga0137385_11244330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300012532\|Ga0137373_10807208	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300013104\|Ga0157370_10187798	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300014654\|Ga0181525_10060192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2144	Open in IMG/M
3300016294\|Ga0182041_10852307	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300017822\|Ga0187802_10169037	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300017925\|Ga0187856_1203517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300017933\|Ga0187801_10169127	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300017933\|Ga0187801_10182881	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300017938\|Ga0187854_10034546	All Organisms → cellular organisms → Bacteria	2639	Open in IMG/M
3300017938\|Ga0187854_10279379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300017943\|Ga0187819_10546587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300017959\|Ga0187779_10306007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	1018	Open in IMG/M
3300017970\|Ga0187783_11209230	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300017974\|Ga0187777_10803251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	672	Open in IMG/M
3300017995\|Ga0187816_10341548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300017995\|Ga0187816_10373804	Not Available	631	Open in IMG/M
3300018013\|Ga0187873_1358771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300018014\|Ga0187860_1186685	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300018017\|Ga0187872_10031876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2939	Open in IMG/M
3300018020\|Ga0187861_10009123	All Organisms → cellular organisms → Bacteria	7107	Open in IMG/M
3300018020\|Ga0187861_10492973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300018021\|Ga0187882_1156623	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300018025\|Ga0187885_10086802	All Organisms → cellular organisms → Bacteria → Acidobacteria	1537	Open in IMG/M
3300018025\|Ga0187885_10218071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300018032\|Ga0187788_10224572	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300018038\|Ga0187855_10015318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5085	Open in IMG/M
3300018040\|Ga0187862_10260188	All Organisms → cellular organisms → Bacteria → Acidobacteria	1111	Open in IMG/M
3300018047\|Ga0187859_10443818	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300018057\|Ga0187858_10275464	All Organisms → cellular organisms → Bacteria → Acidobacteria	1072	Open in IMG/M
3300018062\|Ga0187784_10064960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2959	Open in IMG/M
3300018085\|Ga0187772_10651656	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	752	Open in IMG/M
3300018088\|Ga0187771_11045972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300019877\|Ga0193722_1040549	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300020021\|Ga0193726_1085785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1444	Open in IMG/M
3300020580\|Ga0210403_11508551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300020581\|Ga0210399_10080794	All Organisms → cellular organisms → Bacteria → Acidobacteria	2641	Open in IMG/M
3300020583\|Ga0210401_10651701	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300021171\|Ga0210405_11053455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300021171\|Ga0210405_11074572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300021180\|Ga0210396_11680353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300021181\|Ga0210388_11064434	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300021402\|Ga0210385_10852046	Not Available	699	Open in IMG/M
3300021402\|Ga0210385_10951469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300021406\|Ga0210386_11672090	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300021420\|Ga0210394_11222607	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	644	Open in IMG/M
3300021432\|Ga0210384_11736495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300021433\|Ga0210391_10559723	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300021474\|Ga0210390_10807765	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300021475\|Ga0210392_10618017	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300021559\|Ga0210409_11734659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300021560\|Ga0126371_11223914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	887	Open in IMG/M
3300022508\|Ga0222728_1065338	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300022715\|Ga0242678_1075852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300023090\|Ga0224558_1007862	All Organisms → cellular organisms → Bacteria	7018	Open in IMG/M
3300025477\|Ga0208192_1048884	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300025480\|Ga0208688_1035537	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300027069\|Ga0208859_1004901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1427	Open in IMG/M
3300027562\|Ga0209735_1045239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300027625\|Ga0208044_1060857	All Organisms → cellular organisms → Bacteria → Acidobacteria	1177	Open in IMG/M
3300027641\|Ga0208827_1123801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300027641\|Ga0208827_1204228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300027678\|Ga0209011_1221774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300027696\|Ga0208696_1288855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300027795\|Ga0209139_10144362	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300027882\|Ga0209590_10785636	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300027884\|Ga0209275_10015256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3361	Open in IMG/M
3300027908\|Ga0209006_11246947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300028731\|Ga0302301_1134593	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300028746\|Ga0302233_10083539	All Organisms → cellular organisms → Bacteria → Acidobacteria	1272	Open in IMG/M
3300028783\|Ga0302279_10361797	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300028906\|Ga0308309_10612162	Not Available	945	Open in IMG/M
3300029817\|Ga0247275_1049608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1191	Open in IMG/M
3300030007\|Ga0311338_10076619	All Organisms → cellular organisms → Bacteria → Proteobacteria	4275	Open in IMG/M
3300030053\|Ga0302177_10254666	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300030056\|Ga0302181_10464045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300030058\|Ga0302179_10033220	Not Available	2393	Open in IMG/M
3300030294\|Ga0311349_11552316	Not Available	614	Open in IMG/M
3300030399\|Ga0311353_10382327	All Organisms → cellular organisms → Bacteria → Acidobacteria	1271	Open in IMG/M
3300030518\|Ga0302275_10222895	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300030518\|Ga0302275_10646712	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300030659\|Ga0316363_10078814	Not Available	1500	Open in IMG/M
3300031233\|Ga0302307_10659842	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300031234\|Ga0302325_12834133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300031236\|Ga0302324_102967631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300031247\|Ga0265340_10138054	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300031524\|Ga0302320_10186046	All Organisms → cellular organisms → Bacteria → Acidobacteria	3018	Open in IMG/M
3300031708\|Ga0310686_105769023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300031708\|Ga0310686_107139956	Not Available	786	Open in IMG/M
3300031708\|Ga0310686_118805383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300031718\|Ga0307474_10489742	Not Available	963	Open in IMG/M
3300031823\|Ga0307478_10432530	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300031823\|Ga0307478_11504431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300031947\|Ga0310909_10448185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	1083	Open in IMG/M
3300032805\|Ga0335078_11796181	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300032892\|Ga0335081_10572813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	1400	Open in IMG/M
3300032955\|Ga0335076_11317895	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300033134\|Ga0335073_10741820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1065	Open in IMG/M
3300033977\|Ga0314861_0274782	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.51%
Host-Associated	Host-Associated	1.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.39%
Aquatic	Environmental → Aquatic	26.12%
Plants	Host-Associated → Plants	1.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.45%
Freshwater	Environmental → Aquatic → Freshwater	25.37%
Peat	Environmental → Terrestrial → Peat	11.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.49%
Sediment	Environmental → Aquatic → Sediment	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.45%
Loam	Environmental → Terrestrial → Soil → Loam	8.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.97%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.18%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.19%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.22%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.22%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.48%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.99%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.75%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101981331	3300000567	Peatlands Soil	LSLSLDTREVGCVTIVRCNGRIVAGSASESLLAHVAWLLHTR
Ga0062384_1013317301	3300004082	Bog Forest Soil	LPLSLDTREVGRVTIVHCNGRIVAGSECDSLRAHITWLLRDRRSIVLHLGEVGFI
Ga0062389_1022484191	3300004092	Bog Forest Soil	LSLDTREVGRVTIVRCNGRIVAGVETESLRTHVAWLLRDRRSIVLH
Ga0062389_1038314662	3300004092	Bog Forest Soil	MLLSLDTREVGRVTIVRCNGRIVAGSESESLRAHLAWLLRDR
Ga0070708_1016485831	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LRLSLDTREVGRVTIVRCNGRIVAGGESESLRAHVDWLLRDRRSI
Ga0070731_102795061	3300005538	Surface Soil	MLLSLQTRDVGRVTVIRCNGRIVSGPESESLITHVASLLHDRRAIVLHMEDVVYVDSS
Ga0070731_106100591	3300005538	Surface Soil	VPLSLETREVGRVTIVRCKGRLVAGGEVEALREHIAWLLRDRRAIVLHLGE
Ga0070733_100340785	3300005541	Surface Soil	MRLSLETREVGKVTIVCCNGRIVTGAESESLLSHVAWLLRDRRSIILHMGDVAFVDSS
Ga0070766_107959742	3300005921	Soil	MKLSLETRDVGKVTIVRCKGRLVAGGEVESLKSHISHLLRDRRAIV
Ga0066787_100658662	3300005950	Soil	MPLTLNTREVGRVTIVRCGGRIVAGADTDSLRAHIEHLFLDRKAIVLHLGDVEFVDSSGL
Ga0066790_100185064	3300005995	Soil	MPLSLDTREVGRVTVVQCNGRIVAGKESDALRAHVTWLLRDRRSIVLD
Ga0070717_120525031	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRLSLDTRQVGHVTIVCCNGRIVSGGESEALRAHVASLLRDRRSIVL
Ga0075029_1001197011	3300006052	Watersheds	LNLLLDTREVGRVTIVRCKGRIVAGGEVEALRAHVTHLLRD
Ga0070765_1002072762	3300006176	Soil	VNLSLQTRGVGRVTIVRCGGRIVAGAESVALREHVAEILLDRRSIVLHMG
Ga0070765_1005541271	3300006176	Soil	VNLSLQTRGVGRVTIVRCGGRIVAGAESVALREHVAEILLDRRSIVLHMGE
Ga0070765_1012584482	3300006176	Soil	VRLSLDTREVGRVTIVHCNGRIVAGGESEALREHIV
Ga0099795_105219701	3300007788	Vadose Zone Soil	LPLSLDTREVGRVTIVRCNGRIVAGSESESLRAHVAWLLHSS
Ga0099829_117177341	3300009038	Vadose Zone Soil	VRLSLETRGVGDVTIIRCNGRIVAGSETELLHAHV
Ga0116128_11173131	3300009518	Peatland	LPLSLDTREVGQVTIVHCNGRIVAGRESDSLRAHVAWLL
Ga0116214_13387841	3300009520	Peatlands Soil	MRLSLQTREVGRVTIVRCNGRIVAGSESESLRSHVTWL
Ga0116222_15623631	3300009521	Peatlands Soil	LSLSLDTREVGCVTIVRCNGRIVAGSASESLLAHVAWLLHTRSSIVLNLGQVGFID
Ga0116218_12556641	3300009522	Peatlands Soil	LSLDTREVGRVTIVRCNGRIVVGSGSESLRAHVDRLLLDRRAIV
Ga0116221_11431561	3300009523	Peatlands Soil	MRLSLDTREVGRVTIVRCNGRIVAGSESESLRAHVTWLLRD
Ga0116113_10887961	3300009638	Peatland	LSLSLATREVGRVTIVHCNGRIVAGTASDSLREHVTWLLRDRRSIVLH
Ga0116113_11139632	3300009638	Peatland	LTLETREVGRVTIVHCNGRIIAGKESESLRAHVAWVLRDRRSIVLHLGDVGFVD
Ga0116126_10481014	3300009640	Peatland	LPLSLDTREVGQVTIVHCNGRIVAGRESDSLRAHVAWLLRDRRSIVLH
Ga0116224_100570722	3300009683	Peatlands Soil	VDLALQTRAVGRVTVVRCSGRIVAGVGSVALREHVT
Ga0116101_10076741	3300009759	Peatland	MSVRPSNPLRLTLDTREVGRVTIVHCKGRIVAGGEAEALRAHVAHLLRDRR
Ga0116134_13114301	3300009764	Peatland	VSLSLDTREVGRVTIVRCNGRIVAGKASESLLAHVAW
Ga0116219_102731831	3300009824	Peatlands Soil	LSLSLDTREVGCVTIVRCNGRIVAGSASESLLAHVAWLLHTRSSIVL
Ga0136449_1008259891	3300010379	Peatlands Soil	LRLSLDTRDVGRVTIVHCNGRIVAGGESESLRAHVAWLLRDRRSIVLH
Ga0136449_1030220191	3300010379	Peatlands Soil	MRLSLETREVGRVTIVRCNVRIVAGSESESLRAHVTWLLRDRRAIVLHLGEVGF
Ga0137376_101911822	3300012208	Vadose Zone Soil	LGLSLDTREVGRVTIVRCNGRIVAGSESESLRAHVAWLLRDRRAIV
Ga0137386_106664741	3300012351	Vadose Zone Soil	LGLSLDTREVGRVTIVRCNGRIVAGSESESLRAHVAWLLRDRRAI
Ga0137385_112443301	3300012359	Vadose Zone Soil	LGLSLDTREVGRVTIVRCNGRIVAGSESESLRAHVAWLLRDRRAIVLHL
Ga0137373_108072081	3300012532	Vadose Zone Soil	MIVRCNGRIVAGGESELLSSHVACLFRDRRAIVLHMGEVGFVDSSGLG
Ga0157370_101877983	3300013104	Corn Rhizosphere	LRLSLDTREVGHVTIVRCNGRITAGDECDSLRSHVTW
Ga0181525_100601921	3300014654	Bog	LQLTLDTRKVGRVTIVRCNGRIVAGSSSESLRAHVAWLLHDRRAIVLHLGE
Ga0182041_108523073	3300016294	Soil	MLLSLETREVGRVTVIRCNGRIVSGPESELLISHVATLLQDRRAIVLHIGDVVFIDSSGLGT
Ga0187802_101690372	3300017822	Freshwater Sediment	MIVHRSLLRLTLNTREVGRVTVVQCNGRIVSGGESDSLRTHVNQLLRDRRN
Ga0187856_12035172	3300017925	Peatland	VSLSLDTREVGRVTIVRCNGRIVAGQASESLLAHVAWLLHTRSSIVLNLGE
Ga0187801_101691271	3300017933	Freshwater Sediment	MPLSLDTRGVGKVTVVRCNGRIVAGTENESLRTHISGMMRD
Ga0187801_101828811	3300017933	Freshwater Sediment	MLLSLDTRDVGRVTIVRCQGRIVAGSESESLRTHVASLLEDRR
Ga0187854_100345461	3300017938	Peatland	LRLSLETREVGRVTIVHCNGRIVAGGESESLRAHVSWLLRDRRSIVLHLGEVGF
Ga0187854_102793792	3300017938	Peatland	LLLSLDTREVGRVTIVRCNGRIVAGGESESLRAHVTWLLHTRSSIVLNLG
Ga0187819_105465872	3300017943	Freshwater Sediment	LLLSLDTREVGRVTIVRCMGRIVAGSASESLLAHIAWLLHTRSSIVL
Ga0187779_103060071	3300017959	Tropical Peatland	MQLSLETREVGQVTIVRCNGRIVSGGESESLRSHVAWLLRD
Ga0187783_112092302	3300017970	Tropical Peatland	VKLSLETRDIGRVTIVRCKGRLVAGEEVELLRSHIT
Ga0187777_108032512	3300017974	Tropical Peatland	MQLSLETREVGQVTIVRCNGRIVSGGESESLRTHVAWLLRDHRAIVL
Ga0187816_103415481	3300017995	Freshwater Sediment	VKLALETRDVGRVTIVRCKGRLVAGAEVEALRAHVAWILRDRR
Ga0187816_103738041	3300017995	Freshwater Sediment	MRLSLDTRQVGRVTIVRCNGRIVAGSESESLRAHV
Ga0187873_13587712	3300018013	Peatland	VSLSLDTREVGRVTIVRCNGRIVAGRASESLRAHVAWLLHDRRAIVLHLG
Ga0187860_11866853	3300018014	Peatland	LPLSLDTREVGQVTIVHCNGRIVAGRESDSLRAHVAWLLRDRRSIVLHLGE
Ga0187872_100318765	3300018017	Peatland	LPLSLDTREVGQVTIVHCNGRIVAGRESDSLRAHVAWLLRDRRSIVLHLGEVGF
Ga0187861_100091231	3300018020	Peatland	LPLSLDTREVGQVTIVHCNGRIVAGRESDSLRAHVAWLLRDRRSIV
Ga0187861_104929732	3300018020	Peatland	LLLSLDTREVGRVTIVRCNGRIVAGGESESLRAHVTWLLHTRSSIVLNLGEV
Ga0187882_11566231	3300018021	Peatland	LPLSLDTREVGRVTIVHCNGRIVASESESLRAHVAWLLRDRRSIVLHL
Ga0187885_100868021	3300018025	Peatland	LLLSLDTREVGRVTIVRCNGRIVAGRESESLLAHVAWLLHTRSSIVLNLGEVGFV
Ga0187885_102180711	3300018025	Peatland	VSLSLDTREVGRVTIVRCNGRIVAGQASESLLAHVAWLLHTRSSIVLNL
Ga0187788_102245721	3300018032	Tropical Peatland	MPLSLDTRGVGKVTIVRCNGRIVAGTETEALRSHISGL
Ga0187855_100153181	3300018038	Peatland	LPLTLETREVGRVTIVHCNGRIIAGKESESLRAHVAWVLR
Ga0187862_102601881	3300018040	Peatland	VSLSLDTREVGRVTIVRCNGRIVAGQASESLLAHVAW
Ga0187859_104438181	3300018047	Peatland	LSLDTREVGRVTVVHCKGRIIGGRESESLRAHLSWLLHTRRSFVLHL
Ga0187858_102754641	3300018057	Peatland	LPLSLDTREVGRVTIVHCNGRIVASESESLRAHVAWLLRDRRSIVLHLGE
Ga0187784_100649601	3300018062	Tropical Peatland	MELSLETREVGRVTIVRCNGRIVSGDESESLRTHVAWLLRDRRAIVLH
Ga0187772_106516561	3300018085	Tropical Peatland	MLLSLDTREVGRVTIVRCQGRIVAGRESDSLREHVASLLQDRRSIILH
Ga0187771_110459721	3300018088	Tropical Peatland	MMLSLETREIGRVTIVRCQGRIVAGSASEELRAHITWLLRDRRAIVLHLG
Ga0193722_10405492	3300019877	Soil	LRLSLDTREVGHVTIVRCNGRITAGDECESLRSHVTWLLRDRRAIVLHMGDV
Ga0193726_10857853	3300020021	Soil	VRLTLETREVGRVTIVHCRGRIIAGSETESLHNHLAR
Ga0210403_115085512	3300020580	Soil	LRLSLDTRDVGRVTIVRCNGRIVAGGESEALRAHVDWLLRDRRSI
Ga0210399_100807945	3300020581	Soil	LPLSLDTREVGRVTIVRCNGRIVAGGESESLRAHIDRLLLDRRSIILHMGEV
Ga0210401_106517011	3300020583	Soil	LKLLLETRDVGRVTIVRCKGRLVAGSEVEALRAHVAWILRDR
Ga0210405_110534551	3300021171	Soil	MRLSLETREVGRVTIVRCNGRIVAGSESESLRSHVTW
Ga0210405_110745722	3300021171	Soil	LGLSLDTREVGRVTIVRCNGRIVAGSESESLRAHVAWL
Ga0210396_116803531	3300021180	Soil	MRLALETREVGRVTIVRCNGRIVAGSESESLRSHVTWLLRD
Ga0210388_110644341	3300021181	Soil	LRLSLDTRDVGRVTIVHCNGRIVAGGESESLRAHVAWLLRDRRSIVLHLGEVG
Ga0210385_108520463	3300021402	Soil	MKLSLETRDVGKVTIVRCKGRLVAGGEVESLKSHISHLL
Ga0210385_109514691	3300021402	Soil	LLLSLDTREVGRVTIVRCNGRIVAGGESDSLRSHVTWLLRDRRD
Ga0210386_116720901	3300021406	Soil	LRLTLETRDVGRVTIVRCKGRLVAGGEVEALRAHVA
Ga0210394_112226072	3300021420	Soil	LRLSLDTREVGRVTIVRCNGRIVAGGESESLRSHVSWLLRDRRSIV
Ga0210384_117364951	3300021432	Soil	MRLSLETREVGRVTIVRCNGRIVAGSESESLRSHVTWLLRD
Ga0210391_105597231	3300021433	Soil	LRLSLDTRDVGRVTIVHCNGRIVAGGESESLRTHVAWLLRDRRSIVLHLGEV
Ga0210390_108077651	3300021474	Soil	LRLSLDTRDIGRVTIVHCNGRIVAGSESESLRAHV
Ga0210392_106180172	3300021475	Soil	MALALQTREVGKVTIIECRGRIVAGTETESLHAHLNW
Ga0210409_117346591	3300021559	Soil	LPLSLDTREVGRVTIVRCNGRIVAGSESESLRAHVAWLLHTRRSIVLNLGKV
Ga0126371_112239141	3300021560	Tropical Forest Soil	MELLLETREVGQVTIVRCNGRIVSGGESESLRTHVA
Ga0222728_10653381	3300022508	Soil	LRLTLETRDVGRVTIVRCKGRLVAGGEVEALRAHVAHVLRDR
Ga0242678_10758522	3300022715	Soil	VGKVTIVRCKGRLVAGGEVESLKSHISHLLRDRRAIVLHLGEVVFID
Ga0224558_10078624	3300023090	Soil	LLLSLDTREVGRVTIVRCNGRIVAGSASESLRAHVAWL
Ga0208192_10488841	3300025477	Peatland	LPLTLETREVGRVTIVHCNGRIIAGKESESLRAHVAWVLRDRRSIVLHLGDVGF
Ga0208688_10355371	3300025480	Peatland	LLLSLDTREVGRVTIVRCNGRIVAGRESESLLAHVAWLLHTRSSIVLNLGEVGF
Ga0209236_11473983	3300026298	Grasslands Soil	VRLSLETRGVGDVTIIRCNGRIVAGSETELLHAHVNRLMQDGTDIVLHLGDVV
Ga0208859_10049012	3300027069	Forest Soil	MRLSLETREVGRVTIVRCNGRIVAGSESESLRSHVTWL
Ga0209735_10452391	3300027562	Forest Soil	LPLSLDTREVGRVTIVRCNGRIVAGGESESLRAHIDRLLLDRRSIILHMGEVG
Ga0208044_10608572	3300027625	Peatlands Soil	METRDVGRVTIVRCKGRLVAGAEVEALRAHIAHLLRDRRSIV
Ga0208827_11238012	3300027641	Peatlands Soil	LSLSLDTREVGCVTIVRCNGRIVAGSASESLLAHVAWLLHTRSS
Ga0208827_12042281	3300027641	Peatlands Soil	LRLSLDTRKVGRVTIVRCNGRIVAGSESESLRTHVAWLLRDRRAIVLHLGDV
Ga0209011_12217741	3300027678	Forest Soil	LPLSLDTREVGRVTIVRCNGRIVAGGESESLRAHIDRLLLDRRSIILH
Ga0208696_12888551	3300027696	Peatlands Soil	MRLSLETREVGRVTIVRCNGRIVAGSESESLRSHVTWLLRDRRAIVLH
Ga0209139_101443621	3300027795	Bog Forest Soil	MRLSLDTREVGRVTIVRCNGRIVAGGESESLREHVTWLLRDRRSIVLD
Ga0209590_107856361	3300027882	Vadose Zone Soil	VRYPTGNPLRLTLETREVGRVTIVRCKGRIVAGGETEALRAHVTHLLR
Ga0209275_100152561	3300027884	Soil	LRLSLDTREVGRVTIVCCNGRIIAGGEAESLLAHVAWLLRDRRAIVLHL
Ga0209006_112469471	3300027908	Forest Soil	MLLALETRMVGRVTIVRCNGRIVSGKESDSLREHVAWLLRDR
Ga0302301_11345931	3300028731	Palsa	MSVRPSNPLRLTLDTREVGRVTIVHCKGRIVAGGEAEALRA
Ga0302233_100835393	3300028746	Palsa	VRLSLDTRKVGHVTIVRCNGRIVAGGESDSLRAHVTWLLRDRRAIVLHMGEVEFI
Ga0302279_103617972	3300028783	Bog	MRLALDTRQVGRVTIVSCNGRIVSGGESEALLAHVSWLLH
Ga0308309_106121622	3300028906	Soil	LRLSLDTREVGRVTIVRCKGRIVSGGESESLRTHVAWLLRD
Ga0247275_10496081	3300029817	Soil	LLLSLDTREVGRVTIVRCNGRIVAGGESESLRAHVTWLLHTRSSIVL
Ga0311338_100766195	3300030007	Palsa	LNLSLDTRKVGRVTIVRCAGRIVAGGESESLREHVTWLLRD
Ga0302177_102546661	3300030053	Palsa	LKLSLETREVGRVTIVRCKGRLVSGGETEALRAHVNHLLRDRRSIVLHLGEI
Ga0302181_104640451	3300030056	Palsa	LRLSLDTRKVGRVTIVRCNGRIVAGSESESLRAHVAWLLHDR
Ga0302179_100332203	3300030058	Palsa	MAGPLRLVLDTREVGRVTIVRCNGRIVAGGESELLRSHVSWLLRDRRSIVLHLG
Ga0311349_115523161	3300030294	Fen	MTIAVNTKMRLSLETRDVGRVTIVRCNGRIVTGEESESLRTHVA
Ga0311353_103823271	3300030399	Palsa	VRLSLDTREVGRVTIVHCNGRIVAGGESEALREHIVHLLRDRR
Ga0302275_102228952	3300030518	Bog	LRLTLETREAGRVAIVRCKGRIVAGGEAESLGTHIENLLPLHRAVV
Ga0302275_106467121	3300030518	Bog	LRLSLDTRRVGDVTIVRCNGRIVAGGESESLRAHVTWLLRDRRAIVLHLGEVE
Ga0316363_100788143	3300030659	Peatlands Soil	MRLSLETREVGRVTIVRCNGRIVAGSESESLRAHMTWLLRDRRAIVLHLG
Ga0302307_106598421	3300031233	Palsa	LLLSFDTREVGRVTIVRCNGRIVAGSESESLRAHV
Ga0302325_128341331	3300031234	Palsa	LNLSLDTRKVGRVTIVRCAGRIVAGGESESLREHVTWLLRDRRAILLHLG
Ga0302324_1029676311	3300031236	Palsa	LLLSLDTRQVGRVTIVRCQGRIVAGNESESLRAHVAWLLRDRRSIVLH
Ga0265340_101380542	3300031247	Rhizosphere	MGDPLPLSLDIREVGRVTIVRCNGRIVAGAESDSLRAHVAWLLRDRRSI
Ga0302320_101860466	3300031524	Bog	MRLALDTRQVGRVTIVSCNGRIVSGGESEALLAHVSWLLHDRRSIVLHLGDVAFID
Ga0310686_1057690232	3300031708	Soil	MRLSLETREGGRVTIVRCNGRIVAGSESESLRSHVT
Ga0310686_1071399562	3300031708	Soil	LRLSLDTREVGRVTIVRCNGRIVAGGESESLRSHVSWLLRDRRSIVLHLGDVGFIDSS
Ga0310686_1188053831	3300031708	Soil	MRLSLETREVGRVTIVRCNGRIVAGSESESLRSHVTWLLRDRRAIVLHLGEVG
Ga0307474_104897421	3300031718	Hardwood Forest Soil	MRLSLDTREVGRVTIVRCNGRIVAGSESESLRAHVTWLLRDRR
Ga0307478_104325303	3300031823	Hardwood Forest Soil	MRLSLDTRQVGRVTIVRCNGRIVAGSESESLRAHVTWLLRDRRAIVLHLG
Ga0307478_115044311	3300031823	Hardwood Forest Soil	MRLSLETRDVGRVTIVRCNGRIVAGSESESLRSHVTWLLRDRRAIVL
Ga0310909_104481852	3300031947	Soil	MELSLETREVGQVTIVRCNGRIVSGLESESLRTHVAWLLRDRRAIVLHLGDV
Ga0335078_117961811	3300032805	Soil	LPLSLDTREVGRVTIVRCNGRIVAGRESESLHSHVTWLLRDHRAIVLHLGEIEFVDSSG
Ga0335081_105728131	3300032892	Soil	MELSLETREVGQVTIVRCNGRIVSGGESESLRTHVAWL
Ga0335076_113178951	3300032955	Soil	LLLAFDTRDVGRVTVVRCQGRIVAGGESESLRSHVT
Ga0335073_107418201	3300033134	Soil	VRLTLETRDVGRVTIVRCKGRLVAGGEVEALREHITWLLRDRRAIVL
Ga0314861_0274782_1_156	3300033977	Peatland	MRLSLETREVGRVTIVRCNGRIVTGDESESLRAHVAWLLRDRRAIVLHLGEV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059166

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences