Metagenome / Metatranscriptome Family F059107

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059107
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	102 residues
Representative Sequence	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAAARELL
Number of Associated Samples	103
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.51 %
% of genes near scaffold ends (potentially truncated)	97.76 %
% of genes from short scaffolds (< 2000 bps)	93.28 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.597 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.687 % of family members)
Environment Ontology (ENVO)	Unclassified (51.493 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.896 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.48% β-sheet: 0.00% Coil/Unstructured: 76.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF02777	Sod_Fe_C	74.63
PF01258	zf-dskA_traR	13.43
PF13428	TPR_14	1.49
PF01979	Amidohydro_1	1.49
PF01593	Amino_oxidase	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	74.63
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	13.43

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	74.63 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	45.52 %
Unclassified	root	N/A	19.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.49 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	38.81 %
Unclassified	root	N/A	19.40 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.49 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.49 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	38.81 %
Unclassified	root	N/A	19.40 %
Sterolibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae	1.49 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.49 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	38.81 %
Unclassified	root	N/A	19.40 %
Methyloversatilis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis	1.49 %
Hypericibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Hypericibacter	0.75 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	38.81 %
Unclassified	root	N/A	19.40 %
Methyloversatilis universalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis	1.49 %
Hypericibacter terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Hypericibacter → Hypericibacter terrae	0.75 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_14465161	Not Available	918	Open in IMG/M
3300002074\|JGI24748J21848_1006677	All Organisms → cellular organisms → Bacteria → Proteobacteria	1346	Open in IMG/M
3300004114\|Ga0062593_100194199	All Organisms → cellular organisms → Bacteria → Proteobacteria	1607	Open in IMG/M
3300004480\|Ga0062592_102325216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	536	Open in IMG/M
3300004799\|Ga0058863_11661902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	611	Open in IMG/M
3300005327\|Ga0070658_10363583	Not Available	1240	Open in IMG/M
3300005329\|Ga0070683_102026536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis	553	Open in IMG/M
3300005331\|Ga0070670_101816562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	561	Open in IMG/M
3300005333\|Ga0070677_10365584	Not Available	751	Open in IMG/M
3300005335\|Ga0070666_10121014	All Organisms → cellular organisms → Bacteria → Proteobacteria	1815	Open in IMG/M
3300005339\|Ga0070660_100169942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1760	Open in IMG/M
3300005339\|Ga0070660_100590800	Not Available	928	Open in IMG/M
3300005339\|Ga0070660_101337524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	608	Open in IMG/M
3300005347\|Ga0070668_100865696	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300005355\|Ga0070671_100233920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1559	Open in IMG/M
3300005364\|Ga0070673_102306881	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005434\|Ga0070709_10152563	Not Available	1598	Open in IMG/M
3300005434\|Ga0070709_10368209	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300005436\|Ga0070713_101338958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	694	Open in IMG/M
3300005436\|Ga0070713_101942036	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300005455\|Ga0070663_101233834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	658	Open in IMG/M
3300005458\|Ga0070681_10665835	Not Available	956	Open in IMG/M
3300005458\|Ga0070681_11045492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	737	Open in IMG/M
3300005530\|Ga0070679_100824147	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005534\|Ga0070735_10339233	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300005539\|Ga0068853_101146736	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005546\|Ga0070696_100217295	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300005547\|Ga0070693_101333456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	556	Open in IMG/M
3300005548\|Ga0070665_101774729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	624	Open in IMG/M
3300005564\|Ga0070664_101751174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	589	Open in IMG/M
3300005578\|Ga0068854_100398029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1139	Open in IMG/M
3300005616\|Ga0068852_100517564	All Organisms → cellular organisms → Bacteria → Proteobacteria	1190	Open in IMG/M
3300005841\|Ga0068863_100187638	All Organisms → cellular organisms → Bacteria	1986	Open in IMG/M
3300006196\|Ga0075422_10600752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis	509	Open in IMG/M
3300006237\|Ga0097621_100508858	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300006237\|Ga0097621_101387677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	665	Open in IMG/M
3300006237\|Ga0097621_102213394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	526	Open in IMG/M
3300006358\|Ga0068871_100170283	All Organisms → cellular organisms → Bacteria → Proteobacteria	1866	Open in IMG/M
3300006358\|Ga0068871_100619441	All Organisms → cellular organisms → Bacteria → Proteobacteria	985	Open in IMG/M
3300006358\|Ga0068871_101026910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	769	Open in IMG/M
3300006804\|Ga0079221_10684556	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300006852\|Ga0075433_11039347	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300006871\|Ga0075434_101123057	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300006881\|Ga0068865_101260667	Not Available	656	Open in IMG/M
3300006904\|Ga0075424_101333227	All Organisms → cellular organisms → Bacteria → Proteobacteria	763	Open in IMG/M
3300009093\|Ga0105240_12412907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	544	Open in IMG/M
3300009147\|Ga0114129_10344896	All Organisms → cellular organisms → Bacteria → Proteobacteria	1974	Open in IMG/M
3300009147\|Ga0114129_11558969	Not Available	810	Open in IMG/M
3300009174\|Ga0105241_11381871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	673	Open in IMG/M
3300009177\|Ga0105248_11451571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	776	Open in IMG/M
3300009177\|Ga0105248_12080422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	645	Open in IMG/M
3300010373\|Ga0134128_10568749	All Organisms → cellular organisms → Bacteria → Proteobacteria	1262	Open in IMG/M
3300010375\|Ga0105239_11257189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	854	Open in IMG/M
3300010375\|Ga0105239_11514646	Not Available	775	Open in IMG/M
3300010375\|Ga0105239_12662974	Not Available	583	Open in IMG/M
3300010396\|Ga0134126_10935846	Not Available	973	Open in IMG/M
3300012212\|Ga0150985_104671050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	510	Open in IMG/M
3300012469\|Ga0150984_107562295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	655	Open in IMG/M
3300012510\|Ga0157316_1018902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	733	Open in IMG/M
3300012915\|Ga0157302_10023204	All Organisms → cellular organisms → Bacteria → Proteobacteria	1580	Open in IMG/M
3300012943\|Ga0164241_10887006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	652	Open in IMG/M
3300012944\|Ga0137410_10189419	All Organisms → cellular organisms → Bacteria → Proteobacteria	1588	Open in IMG/M
3300012955\|Ga0164298_11525785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	523	Open in IMG/M
3300012957\|Ga0164303_11001843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	595	Open in IMG/M
3300012960\|Ga0164301_11923200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	501	Open in IMG/M
3300012961\|Ga0164302_10736563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	735	Open in IMG/M
3300012961\|Ga0164302_11644798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	536	Open in IMG/M
3300012986\|Ga0164304_11157638	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300012988\|Ga0164306_10932985	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300012988\|Ga0164306_11909456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	516	Open in IMG/M
3300012989\|Ga0164305_11487427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Hypericibacter → Hypericibacter terrae	600	Open in IMG/M
3300013100\|Ga0157373_10159108	All Organisms → cellular organisms → Bacteria → Proteobacteria	1589	Open in IMG/M
3300013100\|Ga0157373_10200569	All Organisms → cellular organisms → Bacteria → Proteobacteria	1406	Open in IMG/M
3300013296\|Ga0157374_11105534	Not Available	813	Open in IMG/M
3300013296\|Ga0157374_11258349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	762	Open in IMG/M
3300013296\|Ga0157374_11301947	Not Available	749	Open in IMG/M
3300013296\|Ga0157374_12593118	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300013307\|Ga0157372_10245617	All Organisms → cellular organisms → Bacteria → Proteobacteria	2077	Open in IMG/M
3300013307\|Ga0157372_11796107	Not Available	705	Open in IMG/M
3300015200\|Ga0173480_10217542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1022	Open in IMG/M
3300015201\|Ga0173478_10856325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300015371\|Ga0132258_13947614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1007	Open in IMG/M
3300017927\|Ga0187824_10099913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	933	Open in IMG/M
3300019356\|Ga0173481_10019550	All Organisms → cellular organisms → Bacteria → Proteobacteria	2044	Open in IMG/M
3300019356\|Ga0173481_10064494	All Organisms → cellular organisms → Bacteria → Proteobacteria	1305	Open in IMG/M
3300020069\|Ga0197907_10930453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	707	Open in IMG/M
3300020070\|Ga0206356_10040317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	975	Open in IMG/M
3300020078\|Ga0206352_11010424	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300022467\|Ga0224712_10552313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	560	Open in IMG/M
3300025903\|Ga0207680_10036483	All Organisms → cellular organisms → Bacteria → Proteobacteria	2831	Open in IMG/M
3300025904\|Ga0207647_10171913	All Organisms → cellular organisms → Bacteria → Proteobacteria	1261	Open in IMG/M
3300025906\|Ga0207699_10621878	Not Available	787	Open in IMG/M
3300025912\|Ga0207707_10226097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1628	Open in IMG/M
3300025912\|Ga0207707_10757779	Not Available	811	Open in IMG/M
3300025912\|Ga0207707_11018256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	679	Open in IMG/M
3300025914\|Ga0207671_11253061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	579	Open in IMG/M
3300025919\|Ga0207657_10945860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	663	Open in IMG/M
3300025920\|Ga0207649_10048588	All Organisms → cellular organisms → Bacteria → Proteobacteria	2617	Open in IMG/M
3300025921\|Ga0207652_10844715	Not Available	811	Open in IMG/M
3300025926\|Ga0207659_10009134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6191	Open in IMG/M
3300025926\|Ga0207659_11786264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	523	Open in IMG/M
3300025932\|Ga0207690_10328064	All Organisms → cellular organisms → Bacteria → Proteobacteria	1205	Open in IMG/M
3300025932\|Ga0207690_11213710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	630	Open in IMG/M
3300025933\|Ga0207706_11343300	Not Available	589	Open in IMG/M
3300025938\|Ga0207704_11905784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	511	Open in IMG/M
3300025944\|Ga0207661_10134966	All Organisms → cellular organisms → Bacteria → Proteobacteria	2118	Open in IMG/M
3300025945\|Ga0207679_11587755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	600	Open in IMG/M
3300025945\|Ga0207679_11671449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	583	Open in IMG/M
3300025981\|Ga0207640_10299347	All Organisms → cellular organisms → Bacteria → Proteobacteria	1272	Open in IMG/M
3300025981\|Ga0207640_12117207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	510	Open in IMG/M
3300025981\|Ga0207640_12170959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	504	Open in IMG/M
3300026023\|Ga0207677_10720513	Not Available	887	Open in IMG/M
3300026023\|Ga0207677_11567691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	609	Open in IMG/M
3300026041\|Ga0207639_10470681	All Organisms → cellular organisms → Bacteria → Proteobacteria	1144	Open in IMG/M
3300026041\|Ga0207639_10856986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	848	Open in IMG/M
3300026142\|Ga0207698_12669055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	508	Open in IMG/M
3300027360\|Ga0209969_1022267	Not Available	948	Open in IMG/M
3300028381\|Ga0268264_10450146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1247	Open in IMG/M
3300028590\|Ga0247823_10367016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1087	Open in IMG/M
3300028592\|Ga0247822_10906636	Not Available	724	Open in IMG/M
3300028592\|Ga0247822_11778169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	526	Open in IMG/M
3300028809\|Ga0247824_10103085	Not Available	1504	Open in IMG/M
3300031716\|Ga0310813_10490442	Not Available	1072	Open in IMG/M
3300031854\|Ga0310904_10344040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	959	Open in IMG/M
3300031908\|Ga0310900_10005615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5772	Open in IMG/M
3300031938\|Ga0308175_101823836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	681	Open in IMG/M
3300031939\|Ga0308174_10465252	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300032000\|Ga0310903_10056833	All Organisms → cellular organisms → Bacteria → Proteobacteria	1527	Open in IMG/M
3300032017\|Ga0310899_10061453	All Organisms → cellular organisms → Bacteria → Proteobacteria	1411	Open in IMG/M
3300032075\|Ga0310890_10145534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1559	Open in IMG/M
3300032211\|Ga0310896_10455906	Not Available	693	Open in IMG/M
3300033475\|Ga0310811_10088177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4052	Open in IMG/M
3300033551\|Ga0247830_10493477	Not Available	962	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.22%
Environmental	Environmental	44.78%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.48%
Terrestrial	Environmental → Terrestrial	44.03%
Aquatic	Environmental → Aquatic	0.75%
Human	Host-Associated → Human	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.67%
Roots	Host-Associated → Plants → Roots	4.48%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Digestive System	Host-Associated → Human → Digestive System	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.18%
Loam	Environmental → Terrestrial → Soil → Loam	11.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.75%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.70%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	4.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.49%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	9.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.46%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	4.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_144651612	3300000363	Soil	MAIFGKPPAKKNPQAAKSSRGTKREPHVVSARELAAQAATRKTGSPLGLEPLGETSQRGASIIDWSTAPKAIEVAQANPGLCAVLENAALSFANGQDAAAREVLEQGIQTDADAKLS
JGI24748J21848_10066771	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAAARELLDQGVQTDADTKLSPLAWLA
Ga0062593_1001941991	3300004114	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDVAA
Ga0062592_1023252161	3300004480	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAAARELLDQGVQTDADTKLSPLAWLALFD
Ga0058863_116619022	3300004799	Host-Associated	MAIFGKPASRKAPSAKSDERDAKREPKVLSARELAAQAAARKGKLKDVEPLGQTSMRGASIINWSTAPKAIEVAQANPGLCAVLENAALLSLDVRDAGQIAGD*
Ga0070658_103635831	3300005327	Corn Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFAN
Ga0070683_1020265361	3300005329	Corn Rhizosphere	MAIFGKPPAKKVQSPKPTERGVKRSAHVVSARELASQVANRKADKLQGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAGARELLDQGVLTDADTKVSPLAWLALFDLMQRANDR
Ga0070670_1018165621	3300005331	Switchgrass Rhizosphere	MAIFGKPPVKKVQPPKPTNRGIKRESHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDATARELLEQGVQSDPDTKLSPLAWLALFD
Ga0070677_103655841	3300005333	Miscanthus Rhizosphere	MPIFGKPPAKKVPEPASAPRVAKREAHVVSARELAAQAASRKAGKPLGLEPLGETSQRGASIIDWSTAPKAIEVAQ
Ga0070666_101210143	3300005335	Switchgrass Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCASLENAALLFANGQDAAARELLEQGVQTDQDTKLSPLAWLALFDLMQRANDR
Ga0070660_1001699424	3300005339	Corn Rhizosphere	MAIFGKPASRKAPSAKSDERDAKREPKVLSARELAAQAAARKGKLKDVEPLGQTSMRGASIINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDDDARALLEQGVVSDPDAKSSPLAWLALFDLM
Ga0070660_1005908001	3300005339	Corn Rhizosphere	MPIFGKPPAKKVPDASSAPRVAKREAHVVSARELAAQAASRKAGKPLGLEPLGETSQRGASIIDWSTAPKAIEVAQA
Ga0070660_1013375241	3300005339	Corn Rhizosphere	MAIFGKPTARKSESAKSAERAAKREPKVLSARELAAQAVSRKGKLSGVEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFAN
Ga0070668_1008656962	3300005347	Switchgrass Rhizosphere	MPIFGKPPAKKVPDPASVPRVAKREAHVVSARELAAQAASRKAGKPLGLEPLGETSQRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDATAREILEQGVATDPDTKLSPLAWLALFDLL
Ga0070671_1002339203	3300005355	Switchgrass Rhizosphere	MAIFGKPPAKKVQPPKPTDRGNKRESHVVSARELASQVANRTADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDETARELLEQGVQSDPDTKLSPL
Ga0070673_1023068812	3300005364	Switchgrass Rhizosphere	MAIFGKPPVKKVQPPKPTNRGVKRESHVVSARELASQVADRKADKLRGLEPLGETSLRGASIIDWSTAPK
Ga0070709_101525631	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPPAKKVEAPKAEARGGRRESRIVSARELAAEQIANRKAKGKPTGMEPLGETSLRGASVIDWSTAPKAIEVAQANPGLCAELENAALLFANGQDQNARELLEQGIRTDQDTRLSPLAWLALFDLI
Ga0070709_103682091	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPSTRKTRSAKPAEGDAKRETKVMSARELAARAASMKGKLPGLEPLGETSMRGASVVNWSTAPKAIEVAQANPGLCAVLENAALLFANGQDEPARALLEQGV
Ga0070713_1013389582	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPTPPRKRTKRADADVKREPKVMSARELAAHAASRKKNVPGVEPLGVTSMRGASVINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDTE
Ga0070713_1019420361	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPTARKTESAKSAARTAKRDPKVLSARELAAQAVSRKGKHPGVEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDETARELLEQGVQSDPDTKL
Ga0070663_1012338341	3300005455	Corn Rhizosphere	MAIFGKPPVKKVQPPKPTNRGIKRESHVVSARELASEVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDETARELLEQGVQSDPDTKLSPLAWLA
Ga0070681_106658351	3300005458	Corn Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLC
Ga0070681_110454921	3300005458	Corn Rhizosphere	MAIFGKPPAKKVQPPKPADRGVKRDAHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLF
Ga0070679_1008241471	3300005530	Corn Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCATLENAALLFANGQDAAARELLEQGVQT
Ga0070735_103392331	3300005534	Surface Soil	MAIFGKSTTRKPVSAKSAERSAKREAKVMSARELAAEAEIRKGKMQGLEPLGETSLRGASIINWSTAPKAIEVAQANPGLCDVLENASLLYANGQDDDARALLEQGVAGDPDA
Ga0068853_1011467362	3300005539	Corn Rhizosphere	MAIFGKPASRKAQAAKPVERDAKREPKVMSARELAAQAVGRKGKLQGVEPLGETSMRGASVINWSTAPKAIEVAQANPGLCEVLENAALLFANGQDDAARALLAQGVASDPDTK
Ga0070696_1002172953	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPPAKKTATAKSVKGESRVMSARELAAQASSRKAKLPGVEPLGETSLRGASVIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAEARE
Ga0070693_1013334562	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPPAKKVQSPKPTDRGVKRSAHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDTTARE
Ga0070665_1017747291	3300005548	Switchgrass Rhizosphere	MAIFGKPPAKKVQSPKPTERGVKRSAHVVSARELASQVANRKADKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFAN
Ga0070664_1017511741	3300005564	Corn Rhizosphere	MAIFGKPPVKKVQPPKPTNRGIKRESHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDETARELLEQGVQSDPDTKLSPLAWLALFD
Ga0068854_1003980291	3300005578	Corn Rhizosphere	MAIFGKPASRKAPSAKSDERDAKREPKVLSARELAAQAAARKGKLKDVEPLGQTSMRGASIINWSTAPKAIEVAQANPGLCAVLENAALLFAN
Ga0068852_1005175641	3300005616	Corn Rhizosphere	MAIFGKPTARKSPGAKTGEDAKREPKVMSARELAQAASRKAKLPGVEPLGETSMRGASVINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDETARELLEQGVQSDPDTKLSPLAWLALFD
Ga0068863_1001876384	3300005841	Switchgrass Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENA
Ga0075422_106007521	3300006196	Populus Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDVAARELLDQGVQTDADTKLSPLAWLALFDLTQRANDR
Ga0097621_1005088581	3300006237	Miscanthus Rhizosphere	MPIFGKPPAKKVPEPASAPRVAKREAHVVSARELAAQAASRKAGKPLGLEPLGETSQRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDATAREILE
Ga0097621_1013876772	3300006237	Miscanthus Rhizosphere	MAIFGKPPAKKVQSPKPTERGVKRSAHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANSQDAAARELLDQG
Ga0097621_1022133941	3300006237	Miscanthus Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQ
Ga0068871_1001702831	3300006358	Miscanthus Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAAARELL
Ga0068871_1006194411	3300006358	Miscanthus Rhizosphere	MAIFGKPPAKKVQPPKPTDRGNKRESHVVSARELASQVANRTADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDETARELLEQGVQ
Ga0068871_1010269101	3300006358	Miscanthus Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCASLENAALLFANGQDAAARELLEQ
Ga0079221_106845562	3300006804	Agricultural Soil	MAIFGKPTPRKRTKRADADAKREPKVMSARELAAHAASRKKKLPGVEPLGETSMRGASVINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAEARSILEEGVAGDPEAKLSPLAWLALFD
Ga0075433_110393471	3300006852	Populus Rhizosphere	MAIFGKPPAKKTATAKSVKGESRVMSARELAAQASSRKAKLPGVEPLGETSLRGASVIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAEARELLEQSVETDQDTKLSPLAWLALFDLMQRA
Ga0075434_1011230572	3300006871	Populus Rhizosphere	MAIFGKPPAKKTATAKSVKGESRVMSARELAAQASSRKAKLPGVEPLGETSLRGASVIDWSTAPKAIEVAQANPGLCAVLENAALLF
Ga0068865_1012606672	3300006881	Miscanthus Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCASLENAALL
Ga0075424_1013332271	3300006904	Populus Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAAARELLDQGVQTDADT
Ga0105240_124129071	3300009093	Corn Rhizosphere	MAIFGKPASRKASSAKSDERDAKREPKVLSARELAAQAAARKGKLKDVEPLGQTSMRGASIINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDDDARALLE
Ga0114129_103448964	3300009147	Populus Rhizosphere	MAIFGKPPAKKNPQAAKSSRGTKREPHVVSARELAAQAATRKTGSPLGLEPLGETSQRGASIIDWSTAPKAIEVAQANPGLCAVLENAALSFANGQ
Ga0114129_115589692	3300009147	Populus Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCATL
Ga0105241_113818712	3300009174	Corn Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCATLENAALLFANGQDDAARELLEQAVQTDPDTKLSPLAWLALFDLMQR
Ga0105248_114515711	3300009177	Switchgrass Rhizosphere	MAIFGKPPAKKVQPPKPTDRGNKRESHVVSARELASQVANRTADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQ
Ga0105248_120804222	3300009177	Switchgrass Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAAARELLDQGVQTDADTK
Ga0134128_105687493	3300010373	Terrestrial Soil	MAIFGKPPTRRPESKSGERKPKREPKVMSARELAAHAAGRKGKAPALEPLGVTSMRGPSVIEWSTAPNSIEVAQPSAGLSPVLENAALLFANGQDADAREALEQGVAND
Ga0105239_112571892	3300010375	Corn Rhizosphere	MAIFGKPPVKKVQPPKPTNRGIKRESHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDETARELLEQGVQSDPDTKLSPLAWLALFDVIQRANDRTA
Ga0105239_115146462	3300010375	Corn Rhizosphere	MAIFGKPPAKKVQSPKPTERGVKRSAHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLEN
Ga0105239_126629742	3300010375	Corn Rhizosphere	MPIFGKPPAKKVPDASSAPRVAKREAHVVSARELAAQAASRKAGKLLGLEPLGETSQRGASIIDWSTAP
Ga0134126_109358462	3300010396	Terrestrial Soil	MAIFGKPSTRKTRSAKPAEGDAKRETKVMSARELAARAASMKGKLPGLEPLGETSMRGASVVNWSTAPKAIEVAQTNPGLCAVLENAALLFANGQDEPARALLEQGVASDPDTKLSP
Ga0134127_113702721	3300010399	Terrestrial Soil	MAIFGKPTPPRKRTKRADADVKREPKVMSARKLAAHAASRKKNVPGVEPLGVTSMRGASVINWSTAPKAIEVAQANPGLCAVLENAA
Ga0150985_1046710501	3300012212	Avena Fatua Rhizosphere	MSIFGKPPAKKLTDPTSAPRVARREAHVVSARELAAQAASRKAGKPLGLEPLGETSQRGASIIDWSTAPKA
Ga0150984_1075622951	3300012469	Avena Fatua Rhizosphere	MAIFGKPSTRKTPSAKPVEGDAKRETKVMSARELAARAASGKGKLPGLEPLGETSMRGAPSVINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDEPARALLEQGVASDP
Ga0157316_10189021	3300012510	Arabidopsis Rhizosphere	MAIFGKPPAKKVQPPTPTDRGVKRSAHVVSARELASQVANRKAEKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAAL
Ga0157302_100232041	3300012915	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALL
Ga0164241_108870061	3300012943	Soil	MAIFGKPPAKKTPLPKSVKREGHVVSARELAAQAVSRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCATLENAALLFANGQDNSARELL
Ga0137410_101894193	3300012944	Vadose Zone Soil	MALFGKQAKKPQSPKTAERGSKREPHVVSARELAAQVADRQAGKPLGLEPLGETSLRGASVIDWSTAPKAIEVAQANPGLCAVLENAALLFANAQDAAARELL
Ga0164298_115257851	3300012955	Soil	MAIFGKPPAKKVQPPTPTDRGVKRSAHVVSARELASQVANRKAEKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDATARELLDQGV
Ga0164303_110018431	3300012957	Soil	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCASLENAALLFANGQDAAARELLEQGVQTDQDTKLSPLAWL
Ga0164301_119232001	3300012960	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQAANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQ
Ga0164302_107365631	3300012961	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAAARELLDQGVQTDPDTKLSPLAWLAL
Ga0164302_116447982	3300012961	Soil	MAIFGKPPAKKVQPPTPTDRGVKRSAHVVSARELASQVANRKAEKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDATARELLDQGVQTDA
Ga0164304_111576381	3300012986	Soil	MAIFGKPAAKKTESSKAAERKGKRGPGVLSARELAAQATSRKGKLQGLEPLGETSLRGASVIDWSTAPKAIEVAQANPG
Ga0164306_109329851	3300012988	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPLGLEPLGETSLRGASIIDWSTAPKAIEV
Ga0164306_119094561	3300012988	Soil	MAIFGKPPAKKVEAPKADARGGRRESRIVSARELAAEQIANRKAKGKPTGMEPLGETSLRGASVIDWSTAPKAIEVAQ
Ga0164305_114874271	3300012989	Soil	MAIFGKPTARKSESAKSAERAAKREPKVLSARELAAQAVSRKGKLSGVEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENA
Ga0157373_101591081	3300013100	Corn Rhizosphere	MAIFGKPPAKKVQSPKPTDRGVKRSAHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLF
Ga0157373_102005691	3300013100	Corn Rhizosphere	MAIFGKPTARKSESAKSAERAAKREPKVLSARELAAQAVSRKGKLSGVEPLGETSLRGASIIDWSTAPKAIEVAQANPGLC
Ga0157374_111055342	3300013296	Miscanthus Rhizosphere	MPIFGKPPAKKVPEPASAPRVAKREAHVVSARELAAQAASRKAGKPLGLEPLGETSQRGASIIDWSTAPKAIEVA
Ga0157374_112583492	3300013296	Miscanthus Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCASLENAALLFANGQDAAARELLEQGVQTDQDTKLSPLAWLA
Ga0157374_113019472	3300013296	Miscanthus Rhizosphere	MAIFGKPPAKKVQPPKPTDRGTKRESHVVSARELASQVANRKADKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCA
Ga0157374_125931181	3300013296	Miscanthus Rhizosphere	MAIFGKPPAKKVQSPKPTERGVKRSAHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLC
Ga0157372_102456171	3300013307	Corn Rhizosphere	MAIFGKPTARKSESAKSAERAAKREPKVLSARELAAQAVSRKGKLSGVEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDSAARELLEQGVATDTDTKLSPLAWLA
Ga0157372_117961071	3300013307	Corn Rhizosphere	MPIFGKPPAKKVPDASSAPRVAKREAHVVSARELAAQAASRKAGKPLGLEPLGETSQRGASIIDWSTAPKAIEVAQANPGLCA
Ga0173480_102175422	3300015200	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLF
Ga0173478_108563251	3300015201	Soil	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCATLENAALLFANGQDDAARE
Ga0132258_139476141	3300015371	Arabidopsis Rhizosphere	MAIFGKPPAKKTATAKSVKGESRVMSARELAAQASSRKAKLPGVEPLGETSLRGASVIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAEARELLEQSVETDQ
Ga0187824_100999131	3300017927	Freshwater Sediment	MAIFGKPTSRKGQGSKRGDADAKREPKVMSARELAAHAASRKKKLPGVEPLGETSTRGASVINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAEARSVLEEGVATDPEAKISPLAWLALFDLMQ
Ga0173481_100195501	3300019356	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIE
Ga0173481_100644943	3300019356	Soil	MAIFGKPPAKKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCATLENAALLFANGQDDAARELLEQAVQTDPDTKLSPLAWLALFDLMQRA
Ga0197907_109304532	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPASRKAPSAKSDERDAKREPKVLSARELAAQAAARKGKLKDVEPLGQTSMRGASIINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDSAARELLEQGVATDTDTKLSPLAWLALFDLVQRANDRV
Ga0206356_100403172	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPASRKASSAKSDERDAKREPKVLSARELAAQAAARKGKLKDVEPLGQTSMRGASIINWSTAPKAIEVAQANPGLCAVLENAALLFANGQD
Ga0206352_110104241	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPSTRKTRSAKPAEGDAKRETKVMSARELAARAASMKGKLPGLEPLGETSMRGASVVNWSTAPKAIEVAQANPGLCAVLENAALLFANGQ
Ga0224712_105523131	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPASRKAPSAKSDERDAKREPKVLSARELAAQAAARKGKLKDVEPLGQTSMRGASIINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDSAARELLEQGVATD
Ga0207680_100364831	3300025903	Switchgrass Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDVAARELLDQGV
Ga0207647_101719131	3300025904	Corn Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCA
Ga0207699_106218782	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFGKPSTRKTRSAKPAEGDAKRETKVMSARELAARAASMKGKLPGLEPLGETSMRGASVVNWSTAPKAIEVAQANPGLCAVLENAALLFANGQDEPARALLEQGVA
Ga0207707_102260971	3300025912	Corn Rhizosphere	MAIFGKPTARKSPGAKTGEDAKREPKVMSARELAQAASRKAKLPGVEPLGETSMRGASVINWSTAPKAIEVAQANPGLCAVLENAALL
Ga0207707_107577792	3300025912	Corn Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAV
Ga0207707_110182561	3300025912	Corn Rhizosphere	MAIFGKPPAKKVQPPKPADRGVKRDAHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDETARELLEQGV
Ga0207671_112530612	3300025914	Corn Rhizosphere	MAIFGKPTARKSESAKSAERAAKREPKVLSARELAAQAVSRKGKLSGVEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDSAARE
Ga0207657_109458601	3300025919	Corn Rhizosphere	MAIFGKPTPRKRTKRADADAKREPKVMSARELAAHAASRKKKLPGVEPLGETSMRGASVINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAEARSILEEGVAGDPEAKLSPLAWLALFDLMQR
Ga0207649_100485884	3300025920	Corn Rhizosphere	MAIFGKPSTRKTRSAKPAEGDAKRETKVMSARELAARAASMKGKLPGLEPLGETSMRGASVVNWSTAPKAIEVAQANPGLCAVLENAALLFANGQDEPARAL
Ga0207652_108447152	3300025921	Corn Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCASLENAAL
Ga0207659_100091347	3300025926	Miscanthus Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAAARELLDQGVQTD
Ga0207659_117862641	3300025926	Miscanthus Rhizosphere	MAIFGKPPAKKVQSPKPTERGVKRSAHVVSARELASQVANRKADKLRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANSQD
Ga0207690_103280641	3300025932	Corn Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCATLENAALLFANGQDDAARELLEQAVQTD
Ga0207690_112137101	3300025932	Corn Rhizosphere	MPIFGKPPAKKVPEPASAPRVAKREAHVVSARELAAQAASRKAGKPLGLEPLGETSQRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDATAREILEQGVATDP
Ga0207706_113433001	3300025933	Corn Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAVSRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCATLENAALLFANG
Ga0207704_119057841	3300025938	Miscanthus Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQ
Ga0207661_101349664	3300025944	Corn Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDV
Ga0207679_115877551	3300025945	Corn Rhizosphere	MAIFGKPASRKAQAAKPVERDAKREPKVMSARELAAQAVGRKGKLQGVEPLGETSMRGASVINWSTAPKAIEVAQANPGLCEVLENAALLFANGQDDAARALLAQGVASDPDTKLSPLAWLALFD
Ga0207679_116714491	3300025945	Corn Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCATLENAALLFANGQDDAARELLEQAVQTDPDTKLS
Ga0207640_102993471	3300025981	Corn Rhizosphere	MAIFGKPTPRKRTKRADADAKREPKVMSARELAAHAASRKKKLPGVEPLGETSLRGASVIDWSTAPKAIEVAQANPGLCAVLENAALLF
Ga0207640_121172071	3300025981	Corn Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGL
Ga0207640_121709592	3300025981	Corn Rhizosphere	MAIFGKPASRKAPSAKSDERDAKREPKVLSARELAAQAAARKGKLKDVEPLGQTSMRGASIINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDDDARA
Ga0207677_107205132	3300026023	Miscanthus Rhizosphere	MAIFGKPPVKKVQPPKPTDRGTKRESHVVSARELASQVASRKADKLRGLEPLGETSLRGASVIDWSTAPKAIEVAQANPGLCAVL
Ga0207677_115676911	3300026023	Miscanthus Rhizosphere	MPIFGKPPAKKVPEPASAPRVAKREAHVVSARELAAQAASRKAGKPLGLEPLGETSQRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDATAREILEQG
Ga0207639_104706813	3300026041	Corn Rhizosphere	MAIFGKPTPRKRTKRADADAKREPKVMSARELAAHAASRKKKLPGVEPLGETSMRGASVINWSTAPKAIEVAQANPGLCAMLENAALLFANGQDAEARSIL
Ga0207639_108569862	3300026041	Corn Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQD
Ga0207698_126690551	3300026142	Corn Rhizosphere	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCATLENAALLFANGQDDAARELLEQAVQTDPDTKLSPLAWLALFDLMQRAND
Ga0209969_10222672	3300027360	Arabidopsis Thaliana Rhizosphere	MAIFGKPPAKKNPQAAKSSRGTKREPHVVSARELAAQAATRKTGSPLGLEPLGETSQRGASIIDWSTAPKAIEVAQANPGLCAVL
Ga0268264_104501462	3300028381	Switchgrass Rhizosphere	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAA
Ga0247823_103670163	3300028590	Soil	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCASLENAALLFANGQDAAARELLEQGVQTDQDTKLSPLAWLAL
Ga0247822_109066362	3300028592	Soil	MAIFGKPPAKKNPQAAKSSRGTKREPHVVSARELAAQAATRKTGSPLGLEPLGETSQRGASIIDWSTAPKAIEVAQANPGLCAVLENAALSFANGQVAAAREVLEQGI
Ga0247822_117781691	3300028592	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAAARELLDQGVQTDADTKLS
Ga0247824_101030853	3300028809	Soil	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPG
Ga0310813_104904423	3300031716	Soil	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCASLENAALLFANGQDAAARELLEQGVQTDQDTKLSP
Ga0310904_103440402	3300031854	Soil	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCASLENAALLFANGQDAAARELLEQGVQTDQDTKLSPLAWLALFD
Ga0310900_100056156	3300031908	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDVAARELLDQ
Ga0308175_1018238361	3300031938	Soil	MAIFGKPSTRKTRSAKPAEGDAKRDTKVMSARELAARAASGKGKLPGLEPLGETSMRGASVINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDEPARALLEQGVASDPDTK
Ga0308174_104652522	3300031939	Soil	MAIFGKPTTRKTESAKPAARNAKREPKVLSARELAAQAASRKGKLPGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAELENAALLFANAQDTAARELLEQGIATD
Ga0310903_100568333	3300032000	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAAARELLDQGVQTDADTKLSPLAWLALFDLTQR
Ga0310899_100614533	3300032017	Soil	MAIFGKPPAKKVQLPKPTDRGVKRSAHVVSARELASQVANRKAEKPRGLEPLGETSLRGASIIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDVAARE
Ga0310890_101455341	3300032075	Soil	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCAT
Ga0310896_104559062	3300032211	Soil	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIE
Ga0310811_100881775	3300033475	Soil	MAIFGKPPAKKTATAKSVKGESRVMSARELAAQASSRKAKLPGVEPLGETSLRGASVIDWSTAPKAIEVAQANPGLCAVLENAALLFANGQDAEAREL
Ga0247830_104934772	3300033551	Soil	MAIFGKPPARKTPLPKSVKREGHVVSARELAAQAASRNAGKPLGMEPLGETSQRGASVIDWSTAPKAIEVAQANPGLCASLENAALLFANGQDAAARELLEQGVQTDQDT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059107

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences