Metagenome / Metatranscriptome Family F059056

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059056
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	45 residues
Representative Sequence	MTGIELFIVIGGCYAIYTVGMAIATTIDYYSTNKEEQLIKRRK
Number of Associated Samples	77
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	49.25 %
% of genes near scaffold ends (potentially truncated)	23.88 %
% of genes from short scaffolds (< 2000 bps)	84.33 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (33.582 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (37.313 % of family members)
Environment Ontology (ENVO)	Unclassified (87.313 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.761 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. 1GOS2252_10266302 2GOS2240_10252276 3GOS2240_10287386 4GOS2240_10348774 5GOS2239_10355343 6GOS2234_10095763 7GOS2234_10529006 8GOScombined01_1038569987 9JGI25127J35165_10058186 10JGI25127J35165_10653692 11JGI26062J44793_10052416 12JGI26064J46334_10087785 13Ga0068513_10025255 14Ga0068511_10012038 15Ga0068511_10024985 16Ga0068511_10913793 17Ga0066845_100863722 18Ga0066830_100435512 19Ga0066830_100748672 20Ga0066830_101246312 21Ga0066865_103095872 22Ga0066835_100845485 23Ga0066835_102850833 24Ga0066835_103053933 25Ga0066840_100477371 26Ga0066840_100492312 27Ga0066840_101414741 28Ga0066377_102019222 29Ga0066377_102881861 30Ga0066378_101405262 31Ga0066364_100462486 32Ga0066370_100507106 33Ga0066370_102158893 34Ga0066370_103084863 35Ga0066370_103497062 36Ga0066371_100804504 37Ga0099954_11972654 38Ga0099963_10815401 39Ga0100226_14846893 40Ga0068496_1124005 41Ga0101666_10089544 42Ga0101666_11007531 43Ga0101668_10145432 44Ga0101668_10324303 45Ga0101671_10240354 46Ga0101671_10240361 47Ga0101673_10090781 48Ga0101672_10029356 49Ga0079269_12722943 50Ga0111541_102064111 51Ga0111541_102883632 52Ga0115012_106160052 53Ga0115012_106875283 54Ga0115012_108196472 55Ga0115012_114849341 56Ga0138403_11516843 57Ga0138383_10419632 58Ga0138384_11566813 59Ga0160422_100787815 60Ga0160422_100953212 61Ga0160422_101004025 62Ga0160423_103793093 63Ga0160423_108278852 64Ga0160423_109800363 65Ga0163110_100422344 66Ga0163110_101172276 67Ga0163110_101410006 68Ga0163110_104478293 69Ga0163110_105227142 70Ga0163110_110824131 71Ga0163110_110994522 72Ga0163110_115566501 73Ga0163109_114091422 74Ga0163179_108922882 75Ga0211584_10245604 76Ga0211584_10620263 77Ga0211704_10032105 78Ga0211704_10734982 79Ga0211648_10186225 80Ga0211484_10053648 81Ga0211484_10135405 82Ga0211484_10151773 83Ga0211483_100268722 84Ga0211483_100898564 85Ga0211483_101820462 86Ga0211483_102375402 87Ga0211482_10112163 88Ga0211471_10538082 89Ga0211619_10333092 90Ga0211616_100054519 91Ga0211616_10650572 92Ga0211647_100645354 93Ga0211498_101500123 94Ga0211497_100371213 95Ga0211497_102769712 96Ga0211617_104462891 97Ga0211496_103873472 98Ga0211587_101365853 99Ga0211587_101424172 100Ga0211587_103761701 101Ga0211644_102988753 102Ga0211557_102161302 103Ga0211512_100567182 104Ga0211580_102326112 105Ga0211556_103575371 106Ga0211565_100278587 107Ga0211565_100345334 108Ga0211565_100834163 109Ga0211565_104519491 110Ga0211708_102942961 111Ga0211539_104277772 112Ga0211539_104948441 113Ga0211539_104967972 114Ga0211638_100932321 115Ga0211473_100406497 116Ga0211713_105290202 117Ga0211713_106779771 118Ga0211614_102670142 119Ga0209348_10482653 120Ga0209348_10781622 121Ga0209348_11972091 122Ga0209645_100144124 123Ga0208390_11378933 124Ga0208763_10517242 125Ga0208405_10300311 126Ga0208130_11443661 127Ga0209036_100089723 128Ga0209036_11317982 129Ga0183748_10001957 130Ga0183748_10259036 131Ga0183748_10646803 132Ga0073988_123011372 133Ga0310343_109589602 134Ga0310343_109618203
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. 1GOS2252_10266302 2GOS2239_10355343 3GOS2234_10095763 4JGI25127J35165_10653692 5JGI26064J46334_10087785 6Ga0068511_10012038 7Ga0066835_102850833 8Ga0099954_11972654 9Ga0101671_10240361 10Ga0115012_114849341 11Ga0211471_10538082 12Ga0211565_100345334
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1Ga0211587_101365853 2GOS2252_10266302 3GOS2240_10252276 4GOS2234_10095763 5JGI25127J35165_10653692 6Ga0066845_100863722 7Ga0066835_102850833 8Ga0101671_10240361 9Ga0115012_114849341 10Ga0163179_108922882 11Ga0211584_10245604 12Ga0211704_10734982 13Ga0211648_10186225 14Ga0211484_10053648 15Ga0211484_10135405 16Ga0211497_102769712 17Ga0211556_103575371 18Ga0211539_104967972 19Ga0073988_123011372
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.34% β-sheet: 0.00% Coil/Unstructured: 43.66%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF04851	ResIII	1.49
PF16724	T4-gp15_tss	0.75
PF13392	HNH_3	0.75
PF02672	CP12	0.75
PF01050	MannoseP_isomer	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.42 %
Unclassified	root	N/A	33.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	11.94 %
Unclassified	root	N/A	33.58 %
Viruses	superkingdom	All Organisms → Viruses	54.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.94 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	33.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.91 %
Unclassified	root	N/A	33.58 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	33.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	11.94 %
Unclassified	root	N/A	33.58 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.91 %
Unclassified	root	N/A	33.58 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	33.58 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	33.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.91 %
Unclassified	root	N/A	33.58 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	11.94 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	14.18 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.94 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	15.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.91 %
Unclassified	root	N/A	33.58 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.94 %
Haifavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Haifavirus	1.49 %
Lipsvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	14.18 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	14.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.91 %
Unclassified	root	N/A	33.58 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.94 %
Haifavirus tim68	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Haifavirus → Haifavirus tim68	1.49 %
Kanaloavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus	7.46 %
Libanvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Libanvirus	2.24 %
Lipsvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	14.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.91 %
Unclassified	root	N/A	33.58 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.94 %
Haifavirus tim68	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Haifavirus → Haifavirus tim68	1.49 %
Lipsvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	14.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.91 %
Unclassified	root	N/A	33.58 %
unclassified Kanaloavirus	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus	7.46 %
unclassified Libanvirus	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Libanvirus → unclassified Libanvirus	2.24 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.94 %
Haifavirus tim68	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Haifavirus → Haifavirus tim68	1.49 %
Kanaloavirus sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	7.46 %
Libanvirus sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Libanvirus → unclassified Libanvirus → Libanvirus sp.	2.24 %
Lipsvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	14.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.91 %
Unclassified	root	N/A	33.58 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001937\|GOS2252_1026630	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	1084	Open in IMG/M
3300001961\|GOS2240_1025227	Not Available	3614	Open in IMG/M
3300001961\|GOS2240_1028738	All Organisms → Viruses → Predicted Viral	2001	Open in IMG/M
3300001961\|GOS2240_1034877	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1728	Open in IMG/M
3300001962\|GOS2239_1035534	Not Available	2010	Open in IMG/M
3300001964\|GOS2234_1009576	All Organisms → Viruses → Predicted Viral	1921	Open in IMG/M
3300001964\|GOS2234_1052900	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	1743	Open in IMG/M
3300002040\|GOScombined01_103856998	Not Available	3014	Open in IMG/M
3300002482\|JGI25127J35165_1005818	All Organisms → Viruses → Predicted Viral	3244	Open in IMG/M
3300002482\|JGI25127J35165_1065369	Not Available	765	Open in IMG/M

Showing 1 to 10 of 134 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.99%
Oceanic	Environmental → Aquatic → Marine → Oceanic	53.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified	37.31%
Volcanic	Environmental → Aquatic → Marine → Volcanic	5.97%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	14.18%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	39.55%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	37.31%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	5.97%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.99%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	37.31%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	34.33%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	2.99%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.99%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	2.99%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	2.24%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.49%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.75%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	8.96%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	2.99%
Volcanic Co2 Seeps	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seeps	2.99%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001937	Marine microbial communities from the Equatorial Pacific Ocean - GS037	Environmental	Open in IMG/M
3300001961	Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025	Environmental	Open in IMG/M
3300001962	Marine microbial communities from Cocos Island, Costa Rica - GS023	Environmental	Open in IMG/M
3300001964	Marine microbial communities from Rosario Bank, Honduras - GS018	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002955	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - DCM_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300003185	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300004951	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs	Environmental	Open in IMG/M
3300005057	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um	Environmental	Open in IMG/M

Showing 1 to 10 of 77 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2252_10266302	3300001937	Marine	MEPISLFVLFGGAYAIYTVGMAIATNIDYYSTNKEEQLIKRRK*
GOS2240_10252276	3300001961	Marine	MTGVELLVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK*
GOS2240_10287386	3300001961	Marine	MTGIELFIVIGGCYALYTVGMAIATNIDYYSTNKEEQLIKRRK*
GOS2240_10348774	3300001961	Marine	MTGIELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRRDS*
GOS2239_10355343	3300001962	Marine	MTGVELLVVIGGCYAIYTVGMAIATSIDYYSTNKEEQLVKRRRDS*
GOS2234_10095763	3300001964	Marine	MTGIELFIVIGGCYAIYTCGIAIATTIDYYSTEKEAKLVKLGKHRQF*
GOS2234_10529006	3300001964	Marine	MTGIELFIVIGGCYAIYTVGMAIATTIDYYSTNKEEQLIRRRK*
GOScombined01_1038569987	3300002040	Marine	MTGIELLVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK*
JGI25127J35165_10058186	3300002482	Marine	MTGIELFILIGGCYALYTVGIAIATTIDYYSTEKEAKLVKLGKHRQF*
JGI25127J35165_10653692	3300002482	Marine	MELFILIGGCYALYTVGMAIATTIDYHATNKEEKLVKLGKHRQFD*
JGI26062J44793_10052416	3300002955	Marine	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLVKRRRDS*
JGI26064J46334_10087785	3300003185	Marine	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKDEQLVKTARQYQNEK*
Ga0068513_10025255	3300004951	Marine Water	MTGIELFIVIGGCYAIYTCGMAIATTIDYYSTEKEAKLVKLGKHRQF*
Ga0068511_10012038	3300005057	Marine Water	MTGIELFIVIGGCYAIYTVGMAIATTIDYHTYNKNEQLVKR*
Ga0068511_10024985	3300005057	Marine Water	MTGIELFVLIGGCYALYTVGMAIATTIDYYSTEKEAKLVKLGKHRQF*
Ga0068511_10913793	3300005057	Marine Water	MTGLELFILIGGCYALYTVGMAIATTIDYHTYNKDEQLVKR*
Ga0066845_100863722	3300005432	Marine	MTGIELFILIGGCYALYTVGMAIATNIDYYATEKEEKLIKLGKHRQFN*
Ga0066830_100435512	3300005433	Marine	MTGVELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK*
Ga0066830_100748672	3300005433	Marine	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIKRRK*
Ga0066830_101246312	3300005433	Marine	MTGIELLIVIGGCYAIYTVGMAIATNIDYYSTNKDEQLIRRRK*
Ga0066865_103095872	3300005523	Marine	MTGIELFILIGGCYALYTVGMAIATTIDYHTYNKDEQLVKR*
Ga0066835_100845485	3300005606	Marine	MTGIELLVVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRRDS*
Ga0066835_102850833	3300005606	Marine	MTGIELFILIGGCYALYTVGMAIATTIDYYSTEISVL*
Ga0066835_103053933	3300005606	Marine	MTGIELFIVIGGCYAIYTCGMAIATWIDYYSTEKEAKLVKLGKHRQF*
Ga0066840_100477371	3300005608	Marine	IGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRRDS*
Ga0066840_100492312	3300005608	Marine	MTGVELLVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIRRRK*
Ga0066840_101414741	3300005608	Marine	LMTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIKRRK*
Ga0066377_102019222	3300005934	Marine	MTGIELFILIGGCYALYTVGMAIATTIDYYSTEKEAKLVKLGKHRQF*
Ga0066377_102881861	3300005934	Marine	MTGIELFIVIGGCYAIYTCGMAIATWIDYYSTEKEAK
Ga0066378_101405262	3300005946	Marine	MTGIELFILIGGCYALYTVGMAIATNIDYYSTNKDEQLVKTARQYQNEK*
Ga0066364_100462486	3300005960	Marine	LFIVIGGCYAIYTCGMAIATWIDYYSTEKEAKLVKLGKHRQF*
Ga0066370_100507106	3300005971	Marine	ELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIKRRK*
Ga0066370_102158893	3300005971	Marine	TTTMTGLELFILIGGCYALYTVGMAIATTIDYHTYNKDEQLVKR*
Ga0066370_103084863	3300005971	Marine	MTGIELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK*
Ga0066370_103497062	3300005971	Marine	MTGLELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIKRRK*
Ga0066371_100804504	3300006024	Marine	MTGIELFILFGGSYALYTVGMAIATNIDYYSTNKEEQLIKRRK*
Ga0099954_11972654	3300006350	Marine	MTFTINFFTTTTMTGIELFILIGGCYALYTVGMAIATTIDYHTYNKDEQLVKR*
Ga0099963_10815401	3300006413	Marine	MTGIELFIVIGGCYAIYTCGMAIATWIDYYSTEKEAKLVKLGK
Ga0100226_14846893	3300006480	Marine	MTGIELFIVIGGCYAIYICGMAIATTIDYYSTEREAKLVKLGKHRQF*
Ga0068496_1124005	3300006843	Marine	MTGIELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIRRRK*
Ga0101666_10089544	3300007113	Volcanic Co2 Seep Seawater	MTGIELFIVIGGCYAIYTCGMAIATTIDYYSTEKEAKLIKRRQF*
Ga0101666_11007531	3300007113	Volcanic Co2 Seep Seawater	MTSTTNFFTTTTMTGIELFIVIGGCYAIYTVGMAIATTIDYHTYNKDEQLVKR*
Ga0101668_10145432	3300007114	Volcanic Co2 Seep Seawater	MTGIELFVLIGGCYAIYTVGMAIATNIDYYSTNKEEQLIKRRK*
Ga0101668_10324303	3300007114	Volcanic Co2 Seep Seawater	MTGIELFIVIGGCYAIYTVGMAIATTIDYHTYNKDEQLVKR*
Ga0101671_10240354	3300007133	Volcanic Co2 Seeps	MTGIELFILIGGCYALYTTGMAIATTVDYYATEKEEKLIKLGKHRQFN*
Ga0101671_10240361	3300007133	Volcanic Co2 Seeps	IGGCYAIYTVGIAIATNIDYYSTNKDDQLIRRRK*
Ga0101673_10090781	3300007137	Volcanic Co2 Seeps	MTGIELFIVIGGCYAIYTVGMAIATTIDYHTYNKDE
Ga0101672_10029356	3300007152	Volcanic Co2 Seeps	MTGIELFILFGGCYALYTTGMAIATTVDYYATEKEEKLIKLGKHRQFN*
Ga0079269_12722943	3300007334	Marine	MTGIELFIVIGGCYAIYTCGMAIATTIDYYSTEKEAKLVKL
Ga0111541_102064111	3300008097	Marine	MTGIELFIVIGGCYAIYICGMAIATTIDYYSTEKEAK
Ga0111541_102883632	3300008097	Marine	MTGIELFIVIGGCYAIYTCGMAIATWIDYYSTETEAKLVKLGKHRQFE*
Ga0115012_106160052	3300009790	Marine	MTGLELFIAIGGCYAIYTCGMAIATTIDYYAYNKEEQLVKLSRQYQNE*
Ga0115012_106875283	3300009790	Marine	MTGIELFIVIGGCYAIYTCGMAIATTIDYYTTEKEAKLVKLGKHRQF*
Ga0115012_108196472	3300009790	Marine	MELFILIGGCYAIYRVGIAIATNIDYYSTEKEAKLVKRGKHRQYDS*
Ga0115012_114849341	3300009790	Marine	NNFLTNSIMTGIELFILFGGCYALYTAGMAIATTIDYYSTEREEKLIKLGKHRHFN*
Ga0138403_11516843	3300011326	Marine	MTGLELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIRRRK*
Ga0138383_10419632	3300011330	Marine	MTGIELFIVIGGCYAIYTVGIAIATNIDYYSTNKEEQLIRRRK*
Ga0138384_11566813	3300011331	Marine	MTGIELFIVIGGCYAIYTCGMAIATWIDYYSTEKEAKLVKLG
Ga0160422_100787815	3300012919	Seawater	MELFILIGGCYALYTVGMAIATNIDYYSTEKEAKLVKRGKHRQYDN*
Ga0160422_100953212	3300012919	Seawater	MTGIELLVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRRDS*
Ga0160422_101004025	3300012919	Seawater	MTGVELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRRDS*
Ga0160423_103793093	3300012920	Surface Seawater	MTGLELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK*
Ga0160423_108278852	3300012920	Surface Seawater	MTGLELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRRDS*
Ga0160423_109800363	3300012920	Surface Seawater	MELFILIGGCYALYTVGMAIATNIDYYSTNKEEQLIRRRK*
Ga0163110_100422344	3300012928	Surface Seawater	MELFILIGGCYALYTVGMAIATTIDYHATNKEERLVKLGKHRQFD*
Ga0163110_101172276	3300012928	Surface Seawater	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIRRRK*
Ga0163110_101410006	3300012928	Surface Seawater	MTGIELLIAIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRRDS*
Ga0163110_104478293	3300012928	Surface Seawater	MTGIELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLI
Ga0163110_105227142	3300012928	Surface Seawater	MTGIELFVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK*
Ga0163110_110824131	3300012928	Surface Seawater	MTGVELLVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIMRRK*
Ga0163110_110994522	3300012928	Surface Seawater	MTGVELLVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLITRRK*
Ga0163110_115566501	3300012928	Surface Seawater	IVIGGCYALYTVGMAIATNIDYYSTNKEEQLVKRRRDSL*
Ga0163109_114091422	3300012936	Surface Seawater	FFIVMTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIKRRK*
Ga0163179_108922882	3300012953	Seawater	MTGLELFIVIGGCYSIYLVGVAIATNIDYYSTNKEEKLVKLGKHRQYDS*
Ga0211584_10245604	3300020248	Marine	MTGIELFIVIGGCYALYTVGMAIATNIDYYSTNKDEQLVKTARQYQNEK
Ga0211584_10620263	3300020248	Marine	VVHLMTGIELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK
Ga0211704_10032105	3300020257	Marine	MTGIELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK
Ga0211704_10734982	3300020257	Marine	MELFIIIGGCYAIYRVGIAIATNIDYYSTEKEAKLVKRGKHRQYDS
Ga0211648_10186225	3300020267	Marine	MELFILIGGCYALYTVGMAIATNIDYYSTEKEAKLVKRGKHRQYDN
Ga0211484_10053648	3300020269	Marine	MTGIELFILIGGGYALYTVGMAIATNIDYYSTNKEEQLIRRRK
Ga0211484_10135405	3300020269	Marine	MTGLELFIVIGGCYAIYTCGMAIATTIDYYAYNKEEQLVKLSRQYQNE
Ga0211484_10151773	3300020269	Marine	MTGLELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIKRRK
Ga0211483_100268722	3300020281	Marine	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIKRRK
Ga0211483_100898564	3300020281	Marine	MTGIELFILFGGCYALYTVGMAIATTVDYYSTEKEEKLIKLGKHRQFN
Ga0211483_101820462	3300020281	Marine	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIRRRK
Ga0211483_102375402	3300020281	Marine	MTFTTNFFTTTTMTGIELFIVIGGCYAIYTVGMAIATTIDYHTYNKNEQLVKR
Ga0211482_10112163	3300020283	Marine	MTGIELFIVIGGCYAIYTVGMAIATTIDYHTYNKNEQLVKR
Ga0211471_10538082	3300020287	Marine	MREHLLLGGLMTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIKRRK
Ga0211619_10333092	3300020288	Marine	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKDEQLVKTARQYQNEKS
Ga0211616_100054519	3300020306	Marine	MTGIELFIVIGGCYAIYTCGMAIATTIDYYSTEKEAK
Ga0211616_10650572	3300020306	Marine	VIGGCYAIYTCGMAIATTIDYYSTEKEAKLVKLGKHRQF
Ga0211647_100645354	3300020377	Marine	MTGIELFVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK
Ga0211498_101500123	3300020380	Marine	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLIKRRRDS
Ga0211497_100371213	3300020394	Marine	MTGLELFIAIGGCYAIYTCGMAIATTIDYYAYNKEEQLVKLSRQYQNE
Ga0211497_102769712	3300020394	Marine	MTGIELFVLIGGCYALYTVGMAIATTIDYYSTEKEAKLVKLGKHRQF
Ga0211617_104462891	3300020401	Marine	MELFILIGGCYAIYTVGMAIATNIDYYSTNKEEQLIRRRK
Ga0211496_103873472	3300020405	Marine	IIQMTGIELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK
Ga0211587_101365853	3300020411	Marine	MTGIELFIVIGGCYAIYTVGMAIATTIDYYSTNKEEQLIKRRK
Ga0211587_101424172	3300020411	Marine	MTGVELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK
Ga0211587_103761701	3300020411	Marine	NFFIVMTGIELFIVIGGCYALYTVGMAIATNIDYYSTNKEEQLIKRRK
Ga0211644_102988753	3300020416	Marine	MEPISLFVLFGGAYAIYTVGMAIATNIDYYSTNKEEQLIKRRK
Ga0211557_102161302	3300020418	Marine	MTGIELFIVIGGCYAIYTVGMAIATSIDYYSTNKEEQLIRRRK
Ga0211512_100567182	3300020419	Marine	MTGLELFIVIGGCYSIYLVGVAIATNIDYYSTNKEEKLVKLGKHRQYDS
Ga0211580_102326112	3300020420	Marine	MTGIELFIVIGGCYAIYICGMAIATTIDYYSTEKEAKLVKLGKHRQF
Ga0211556_103575371	3300020432	Marine	MTGIEIFILFGGCYALYTVGMAIATTVDYYNTEKEEKLIKLGKHRQFN
Ga0211565_100278587	3300020433	Marine	YPPTQELLMTGVELLVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK
Ga0211565_100345334	3300020433	Marine	MELFILIGGCYALYTVGMAIATNIDYYSTNKEEQLIRRRKXSKLKAGTSN
Ga0211565_100834163	3300020433	Marine	YPPTQELLMTGVELLVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRKRDS
Ga0211565_104519491	3300020433	Marine	NFFIVMTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLVKRRRDS
Ga0211708_102942961	3300020436	Marine	MTGVELLVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRK
Ga0211539_104277772	3300020437	Marine	MTFTINFFTTMTGIELFILIGGCYALYTVGMAIATTIDYYSTEKEAKLVKLGKHRQF
Ga0211539_104948441	3300020437	Marine	MTGIELFIVIGGCYAIYTVGMAIATTIDYHTYNKDEQLVKR
Ga0211539_104967972	3300020437	Marine	MTGIELLIAIGGCYAIYTVGMAIATSIDYYSTNKEEQLVKRKRDS
Ga0211638_100932321	3300020448	Marine	MTGIELFIVIGGCYAIYICGMAIATTIDYYSTEKEAKLVKLG
Ga0211473_100406497	3300020451	Marine	MTGIELFIVIGGCYAIYTCGMAIATTIDYYSTEKEA
Ga0211713_105290202	3300020467	Marine	MTSTINFFTTMTGIELLIVIGGCYAIYTCGMAIATTIDYYSTEKEAKLVKLGKHRQFN
Ga0211713_106779771	3300020467	Marine	IMTGIELFIVIGGCYAIYICGMAIATTIDYYSTEKETKLVKLGKHRQFN
Ga0211614_102670142	3300020471	Marine	MELFIIIGGCYALYTVGMAIATTIDYHATNKEEKLVKLGKHRQFD
Ga0209348_10482653	3300025127	Marine	MELFILIGGCYALYTVGMAIATTIDYHATNKEEKLVKLGKHRQFD
Ga0209348_10781622	3300025127	Marine	MTGIELFILIGGCYALYTVGIAIATTIDYYSTEKEAKLVKLGKHRQF
Ga0209348_11972091	3300025127	Marine	MTGIELFILIGGCYALYTVGMAIATTIDYHTYNKDEQLVKR
Ga0209645_100144124	3300025151	Marine	MTGIELFIVIGGCYAIYTCGMAIATTIDYYSTEKEAKLVKLGKHRQF
Ga0208390_11378933	3300026081	Marine	LFIVIGGCYAIYTCGMAIATWIDYYSTEKEAKLVKLGKHRQF
Ga0208763_10517242	3300026136	Marine	NNFLTNSIMTGIELFILIGGCYALYTTGMAIATTVDYYSTEKEEKLIKLGKHRQFN
Ga0208405_10300311	3300026189	Marine	MTGVELLVLIGGCYAIYTVGMAIATSIDYYSTNKEEQLIKRRRDS
Ga0208130_11443661	3300026258	Marine	ELFILIGGCYALYTVGMAIATNIDYYATEKEEKLIKLGKHRQFN
Ga0209036_100089723	3300027702	Marine	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLVKRRRDS
Ga0209036_11317982	3300027702	Marine	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKDEQLVKTARQYQNEK
Ga0183748_10001957	3300029319	Marine	MTGIELFILIGGCYALYTVGMAIATTIDYYSTEKEAKLVKLGKHRQF
Ga0183748_10259036	3300029319	Marine	MTGIELFIVIGGCYAIYTVGMAIATNIDYYSTNKEEQLVKRRK
Ga0183748_10646803	3300029319	Marine	MELFILIGGCYAIYRVGIAIATNIDYYSTEKEAKLVKRGKHRQYDS
Ga0073988_123011372	3300030780	Marine	MTGLELFILIGGCYALYTVGMAIATTIDYHTYNKDEQLVKR
Ga0310343_109589602	3300031785	Seawater	MTGIELFILIGGCYALYTVGMAIATTIDYYSTEKEAKLVKRRQF
Ga0310343_109618203	3300031785	Seawater	MTGIELFIVIGGCYAIYTCGMAIATWIDYYSTEKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters