Basic Information | |
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Family ID | F058681 |
Family Type | Metagenome |
Number of Sequences | 134 |
Average Sequence Length | 38 residues |
Representative Sequence | VRPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSGS |
Number of Associated Samples | 41 |
Number of Associated Scaffolds | 134 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.75 % |
% of genes from short scaffolds (< 2000 bps) | 0.75 % |
Associated GOLD sequencing projects | 36 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.31 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (99.254 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (53.788 % of family members) |
Environment Ontology (ENVO) | Unclassified (66.418 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (53.731 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 15.15% β-sheet: 0.00% Coil/Unstructured: 84.85% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.31 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Lake Freshwater Freshwater, Plankton Freshwater Rhizosphere Activated Sludge Wastewater Effluent |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
B570J40625_1002323274 | 3300002835 | Freshwater | MRPNVGAKLPAEADDVSLVCEGAEGAARQACDGCRSGSA* |
B570J40625_1004511104 | 3300002835 | Freshwater | CEWIARPNVRAKLPAEAGFVSPVRDDGTTGADRAYKACRRGSA* |
B570J40625_1009827343 | 3300002835 | Freshwater | MCDLGPNVRAKLPEEACSVSLVCEGAEGAAHQAYAACRSGS |
B570J40625_1011697222 | 3300002835 | Freshwater | LAQPNVRAKLPAEAGAVSLVRDDAPCAVDQAYSACRSGSA* |
Ga0063591_1019052 | 3300003966 | MVKGLHTMYLMPNVRAKLPAEAGAVSLVRDDAPCAADQAYGACRSGSA* | |
Ga0063591_1020821 | 3300003966 | VNMLRRSRVRPNVRAKLPAEARSVSLVRDDASMAADQAYA | |
Ga0068877_101188641 | 3300005525 | Freshwater Lake | MPNVRGNLPAEARSVSLVRDNASMAADQAYAACRSGSG |
Ga0068877_101793572 | 3300005525 | Freshwater Lake | MAGDIGSEANVRVKPPAEAGSVSLVCEGAEGAAHQAYAACRSGSA* |
Ga0068877_102909411 | 3300005525 | Freshwater Lake | VLVVRPNVRAKLPVEAGAVSLVRDDAPSAADQAYSACR |
Ga0068877_103259451 | 3300005525 | Freshwater Lake | MTTPNVRTKLPAEAGAVSLVRDDAPCAADQAYSACRSGSA |
Ga0068877_104095562 | 3300005525 | Freshwater Lake | PNVRAKLPAEAGAVSLVRDDAPCAADQAYGACRSGSA* |
Ga0068877_104122032 | 3300005525 | Freshwater Lake | RVKPPAEAGSVSLVRDDAPCAADQAYAACRSGSA* |
Ga0068877_104457372 | 3300005525 | Freshwater Lake | MMAERYIAFVRPNVRAKLPAEAGAVSLVRDDAPSAADQAYSA |
Ga0068877_106279392 | 3300005525 | Freshwater Lake | MPNVRAKLPAEAGAVSLVRDDAPSAADQAYSACRSGSA |
Ga0068876_103788364 | 3300005527 | Freshwater Lake | PNVRAKLPAEACSVSLVCEGAEGAAHQAYAACRSGSA* |
Ga0068872_103080831 | 3300005528 | Freshwater Lake | PNVRAKLPAEAGAVSLVRDDAPSAADQAYSACRSGSA* |
Ga0073902_101202693 | 3300005656 | Activated Sludge | VPPNVRAKLLAEACLVSLVRENVQGTADQAYNACRSGSA |
Ga0075157_100073641 | 3300005961 | Wastewater Effluent | RAKLPAEAGAVSLVRDDAPRAADQAYSACRSGSA* |
Ga0075157_100298871 | 3300005961 | Wastewater Effluent | RAKLPAEAGVVSLVRDDAPCAADQAYSACRSGSA* |
Ga0075157_100306047 | 3300005961 | Wastewater Effluent | MPNVRAKLPAEAGAVSLVRDDAPSAADQAYSACRSGS |
Ga0075157_100618573 | 3300005961 | Wastewater Effluent | MPNVRAKPTAEAGGVSLVRDDAPCAADQAYAACRS |
Ga0075157_100637621 | 3300005961 | Wastewater Effluent | VWIVQPNVRAKLPAEAGAVSLVRDDAPRAADQAYSACR |
Ga0075157_100991201 | 3300005961 | Wastewater Effluent | RAKLPAEAGAVSLVREDAPCAADQAYSACRSGSA* |
Ga0075157_101193951 | 3300005961 | Wastewater Effluent | VRPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSGSA |
Ga0075157_101353442 | 3300005961 | Wastewater Effluent | VILRPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSGS |
Ga0075157_101389351 | 3300005961 | Wastewater Effluent | PNVRAKLPAEAGAVSLVRDDASRAADQAYSACRSGSA* |
Ga0075157_101449972 | 3300005961 | Wastewater Effluent | VRPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRGGSA* |
Ga0075157_101517372 | 3300005961 | Wastewater Effluent | MLVARPNVRAKLPAEAGAVSLVRDDAPCAADQAYSAC |
Ga0075157_101567751 | 3300005961 | Wastewater Effluent | RAKLPAEASTVSPGCDDAPSAAARAYSACRSGSA* |
Ga0075157_101924841 | 3300005961 | Wastewater Effluent | MRPNVRAKLPAEAGAVSLVRDDAPSAADQAYSACRSG |
Ga0075157_102153111 | 3300005961 | Wastewater Effluent | VVVVTPNVRAKLPAEAGAVSLVRDDAPTAADQAYSACRSGSA* |
Ga0075157_102191092 | 3300005961 | Wastewater Effluent | VQPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACR |
Ga0075157_102273262 | 3300005961 | Wastewater Effluent | MRLVARPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSGSA |
Ga0075157_102341781 | 3300005961 | Wastewater Effluent | PNVRAKLPAEACVVSLVRENVQGTANQAYNACRSGSA* |
Ga0075157_102477841 | 3300005961 | Wastewater Effluent | PNVRAKPTAEAGGVSLVRDDAPCAADQAYDACRSGSA* |
Ga0075157_102496751 | 3300005961 | Wastewater Effluent | FLMPNVRAKLPAEAGAVSLVRDDAPSAADQAYSACRSGSA* |
Ga0075157_102556923 | 3300005961 | Wastewater Effluent | PNVRAKPTAEAGAVSPDRDDSTNGAVRAYSACRSGSA* |
Ga0075157_102661172 | 3300005961 | Wastewater Effluent | TPNVRAKLPAEAGAVSLVRDDAPGAADQAYSACRSGSA* |
Ga0075157_102735162 | 3300005961 | Wastewater Effluent | MWNARPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSGSA |
Ga0075157_102848791 | 3300005961 | Wastewater Effluent | MERRREDMTIVRPNVRAKLPAEAGAVSPVRDDAPCAADRAYSACRSGSA* |
Ga0075157_103069261 | 3300005961 | Wastewater Effluent | PNVRAKLPAEAGGVRLVRDDAPSAADQPYDACRSGSA* |
Ga0075157_103329301 | 3300005961 | Wastewater Effluent | ARPNVRAKLPAEAGAVSLVRDDATCAANQAYSACRSGSA* |
Ga0075157_103449581 | 3300005961 | Wastewater Effluent | PNVRAKLPAEAGAVSPGRDDAPFAAARAYSACRSGSA* |
Ga0075157_103523001 | 3300005961 | Wastewater Effluent | LIVQPNVRAKLPAEAGAVSLVRDDAPSAADQAYSACRSGS |
Ga0075157_103544232 | 3300005961 | Wastewater Effluent | RAKPTAEAGAVSPVRDDSTNGADRAYSACRSGSA* |
Ga0075154_101422494 | 3300005989 | Wastewater Effluent | VRPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSGS |
Ga0075154_101580771 | 3300005989 | Wastewater Effluent | PNVRAKLPAEAGAVSLVRDDAPSAANQAYSACRSGSA* |
Ga0075154_103945361 | 3300005989 | Wastewater Effluent | TPNVRAKLPAEAGTVSLVRDDASRAADQAYSACRSGSA* |
Ga0075154_105020881 | 3300005989 | Wastewater Effluent | RAKLPAEAGGVRLVRDDAPCAADQPYAACRSGSA* |
Ga0114341_103265911 | 3300008108 | Freshwater, Plankton | VLPNVRAKLAAEAGAVSLVRDDAPSAADQAYTACRS |
Ga0114356_13835112 | 3300008121 | Freshwater, Plankton | VAFVRPNVRVKPPAEAGSVSLVRDDAPCAADQAYAACRS |
Ga0164293_107664711 | 3300013004 | Freshwater | LGSGICVGVRPNVGAKLPAEARSVSLVRDDASRAADQAYAA |
Ga0208327_10210941 | 3300020522 | Freshwater | MNVRPNVGAKLPAEARSVSLVRDDASRAADQAYAAC |
Ga0209278_10335885 | 3300027673 | Wastewater Effluent | VTPNVRGNLPAEARSVSLVRDDASMAADQAYAACRSGS |
Ga0209278_10474671 | 3300027673 | Wastewater Effluent | VTPNVRAKLPAEAGAVSLVRDDAPSAADQAYSACR |
Ga0209812_101483642 | 3300027786 | Wastewater Effluent | EALDPHTKARFLMPNVRAKLPAEAGAVSLVRDDAPSAADQAYSACRSGSA |
Ga0209985_100622461 | 3300027806 | Freshwater Lake | MLNVRPNVRGNLPAEARSVSLVRDNASMAADQAYAA |
Ga0209985_101168121 | 3300027806 | Freshwater Lake | MTPNVRAKLPAEACSVSLVCEGAEGAAHQAYAACRSG |
Ga0209985_101446901 | 3300027806 | Freshwater Lake | MRPNVRGNLPAEARSVSLVRDDASRAADQAYAACR |
Ga0209985_102619912 | 3300027806 | Freshwater Lake | MPNVRGNLPAEARSVSLVRDNASMAADQAYAACRSGS |
Ga0209985_102722771 | 3300027806 | Freshwater Lake | VLVVKPNVRVKPPAEAGSVSLVRDDAPCAADQAYAA |
Ga0209990_101335901 | 3300027816 | Freshwater Lake | MVDVNARPNVRAKLPAEAGAVSPVRDNSTAGADRAYSAC |
Ga0307408_1013268922 | 3300031548 | Rhizosphere | MMANVRVNRPAEAGGVRLVCEGAEGAAHQAYAACRSGSG |
Ga0315902_108462291 | 3300032093 | Freshwater | VLPNVRAKLPAEACSVSLVCEGAEGAAQQAYAACRS |
Ga0334977_0097635_1432_1572 | 3300033978 | Freshwater | MGVGGFCVRPNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRSGSA |
Ga0334977_0375742_558_665 | 3300033978 | Freshwater | MTPNVGAKLPAEARSVSLVRDDASRAADQAYAACRS |
Ga0334981_0108024_1_120 | 3300033980 | Freshwater | MIVLPNVRVKLRATAGSVSLVREDVRSTADQAYAACRSVS |
Ga0334981_0238749_3_113 | 3300033980 | Freshwater | MNLMPNVGAKLPAEARSVSLVRDDASRAADQAYAACR |
Ga0334981_0298796_2_121 | 3300033980 | Freshwater | MRMVVFVMPNVGAKLPAEAGAVSLVRDDAPSAADQAYSAC |
Ga0334981_0395282_3_110 | 3300033980 | Freshwater | MLACGLLRPNVGAKRPAEAGAVSLVRDDAPSAADQA |
Ga0334981_0401623_480_584 | 3300033980 | Freshwater | MTPNVRGNLPAEARSVSLVRDDASRAADQAYAACR |
Ga0334982_0350823_567_680 | 3300033981 | Freshwater | MTPNVGAKLPAEARSVSLVRDDASRAADQAYAACRSGS |
Ga0334982_0375362_2_115 | 3300033981 | Freshwater | MMPNVRAKLPAEAGAVSLVRDDAPSAADQAYSACRSGS |
Ga0334982_0495841_436_540 | 3300033981 | Freshwater | MLFGGPNVGAKLPAEARSVSLVRDDASRAADQAYA |
Ga0334992_0167088_1004_1117 | 3300033992 | Freshwater | MLKRALVRPNVGAKLPAEARSVSLVRDDASRAADQAYA |
Ga0334996_0075035_3_113 | 3300033994 | Freshwater | MSGIRTPNVRAKLPAEAGAVSLVRDDAPCAADQAYSA |
Ga0334996_0182608_583_708 | 3300033994 | Freshwater | MALTPNVRAKLPAEAGAVSLVRDDAPRAANQAYSACRSGSA |
Ga0334996_0188444_990_1112 | 3300033994 | Freshwater | MSVKPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSGSA |
Ga0334996_0206752_2_109 | 3300033994 | Freshwater | MFPGGPNVRAKLPAEAGAVSLVRDDAPSAADQAYSA |
Ga0334996_0219347_878_1000 | 3300033994 | Freshwater | MFVTPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSGSA |
Ga0334996_0234397_828_953 | 3300033994 | Freshwater | METSFMRPNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRSG |
Ga0334996_0314305_2_115 | 3300033994 | Freshwater | MVVRNFVTPNVGAKLPAEAGAVSLVRDDAPSAADQAYS |
Ga0334996_0470231_2_112 | 3300033994 | Freshwater | NVRAKLPAEACSVSLVCEGAEGAAHQAYAACRSGSA |
Ga0334996_0528511_3_128 | 3300033994 | Freshwater | MSGKRSNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRSGSA |
Ga0334979_0264351_2_112 | 3300033996 | Freshwater | MPNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRSGS |
Ga0334979_0266863_879_983 | 3300033996 | Freshwater | MSNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRS |
Ga0334979_0407600_640_750 | 3300033996 | Freshwater | MKPNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRSG |
Ga0334998_0052275_2729_2842 | 3300034019 | Freshwater | MRSNVGAKLPAEARSVSLVRDDASRAADQAYAACRSGS |
Ga0334998_0549846_526_636 | 3300034019 | Freshwater | MRPNVGAKLPAEARSVSLVRDDASRAPDQAYAACRSG |
Ga0335002_0123700_1580_1717 | 3300034020 | Freshwater | MSLKQYLILRPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSGS |
Ga0335002_0220573_2_115 | 3300034020 | Freshwater | MRPNVGAKLPAEARSVSLVRDDASRAPDQAYAACRSGS |
Ga0335002_0369299_3_125 | 3300034020 | Freshwater | MVVRPNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRSGSA |
Ga0335002_0425128_622_729 | 3300034020 | Freshwater | MMPNVRAKLPAEACSVSLVCEGAEGAAHQAYAACRS |
Ga0335002_0482853_3_137 | 3300034020 | Freshwater | MGWIVRQQCVCVRPNVGAKLPAEAGAVSLVRDDAPSAADQAYSAC |
Ga0335002_0537762_3_146 | 3300034020 | Freshwater | MVRVNAGFLATPNVRAKLPAEACSVSLVCEGAEGAAHRAYAACRSGSA |
Ga0335002_0566432_2_127 | 3300034020 | Freshwater | MASRPRAFVMPNVRAKLPAEAGAVSLVRDDAPCAADQAYSAC |
Ga0335002_0676425_1_120 | 3300034020 | Freshwater | MHCEWIARPNVRAKLPAEAGAVSLVRDDAPCAADQAYSAC |
Ga0334987_0270347_1010_1144 | 3300034061 | Freshwater | MSSCDARSVRPNVRAKLPAEAGAVSLVRDDAPSAAAQAYSACRSG |
Ga0334987_0385505_784_891 | 3300034061 | Freshwater | MTWEVMTPNVRAKLPAEAGAVSLVRDDAPCAADQAY |
Ga0334987_0470562_2_121 | 3300034061 | Freshwater | MGLGPNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRSGS |
Ga0334987_0517439_3_143 | 3300034061 | Freshwater | GSAAVWVVRPNVRAKLPAEADGVSLVCEGAEGAAHQAYDDCRSGSA |
Ga0334987_0588082_2_112 | 3300034061 | Freshwater | MLTPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACR |
Ga0334987_0641235_504_617 | 3300034061 | Freshwater | MLECHRRPNVRAKLPAEAGAVSLVRDDAPCAADQAYSA |
Ga0334995_0718658_3_113 | 3300034062 | Freshwater | MFPGGPNVRAKLPAEAGAVSLVRDDAPSAADQAYSAC |
Ga0335019_0165569_1343_1447 | 3300034066 | Freshwater | MCFARPNVRAKLPAEAGAVSLVRDDAPCAADQAYS |
Ga0335019_0180100_1271_1375 | 3300034066 | Freshwater | MTPNVRAKLPAEAGAVSLVRDDAPSAADQAYSACR |
Ga0335019_0293515_3_113 | 3300034066 | Freshwater | MGLRMPNVRAKLPVEACSVSLVCEGAEGAAHQAYAAC |
Ga0335019_0587417_529_654 | 3300034066 | Freshwater | MTCEVMTPNVRVKPPVEAGSVSLVCEGAEGAAHLAYAACRSG |
Ga0335019_0591923_2_106 | 3300034066 | Freshwater | MTVTPNVRAKLPAEAGAVSLVRDDAPSAADQAYSA |
Ga0335019_0610408_528_635 | 3300034066 | Freshwater | MKPNVRAKLPTEAGAVSLVRDDAPSAADQAYSACRS |
Ga0335028_0456554_602_715 | 3300034071 | Freshwater | MTPNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRSGS |
Ga0335010_0525968_493_615 | 3300034092 | Freshwater | MWWWNLRPNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRS |
Ga0335025_0168175_1_105 | 3300034096 | Freshwater | MSNVGAKLPAEARSVSLVRDDASRAADQAYAACRS |
Ga0335029_0469641_12_137 | 3300034102 | Freshwater | MALTPNVRAKLPAKAGAVSLVRDDAPSAADQAYSACRSGSA |
Ga0335030_0456855_707_814 | 3300034103 | Freshwater | MFLPPNVGAKLPAEARSVSLVRDDASRAADQAYAAC |
Ga0335031_0268273_1006_1122 | 3300034104 | Freshwater | MQTAALVRPNVRAKLPAEAGAVSLVRDDAPCAADQAYSA |
Ga0335063_0468132_3_110 | 3300034111 | Freshwater | MRPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRS |
Ga0335066_0193711_2_130 | 3300034112 | Freshwater | MCVHVMPNVRGNLPAEARSVSLVRDDASRAADQAYAACRSGSG |
Ga0335066_0491796_543_650 | 3300034112 | Freshwater | MMPNVRAKLPAEARSVSLVRDDASRPADQAYAACRS |
Ga0335054_0131811_1420_1530 | 3300034119 | Freshwater | MVLLVLPNVRAKLPAEAGAVSLVRDDAPCAADQAYSA |
Ga0335054_0343128_760_864 | 3300034119 | Freshwater | MLPNVRAKLPTEAGAVSLVRDDAPSAADQAYSACR |
Ga0335054_0424972_627_755 | 3300034119 | Freshwater | VLLVLPNVRAKLPAEADGVSLVCEGAEGAAHQAYDDCRSGSA |
Ga0335054_0584452_479_613 | 3300034119 | Freshwater | MASRPRAFVMPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSG |
Ga0335054_0785578_387_503 | 3300034119 | Freshwater | MLFGGPNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRS |
Ga0335056_0466424_2_118 | 3300034120 | Freshwater | MDIASLVRPNVGAKLPAEARSVSLVRDDASRAADQAYAA |
Ga0335049_0264254_745_870 | 3300034272 | Freshwater | MNVMPNVRAKLPAEACSVSLVCEGAEGAAHQAYAACRSGSA |
Ga0335049_0278262_1006_1140 | 3300034272 | Freshwater | MSLKQYLILRPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRSG |
Ga0335049_0337092_866_1006 | 3300034272 | Freshwater | MEPALSGFMRPNVGAKLPAEAGAVSLVRDDAPSAADQAYSACRSGSA |
Ga0335049_0525341_641_748 | 3300034272 | Freshwater | MNVMPNVRAKLPAEAGAVSLVRDDAPSAADQAYSAC |
Ga0335049_0601943_566_679 | 3300034272 | Freshwater | MELALSGFMRPNVRAKLPAEACSVSLVCEGAEGAAHQA |
Ga0335049_0624163_2_106 | 3300034272 | Freshwater | MVLPNVRAKLPAKAGAVSLVRDDAPSAADQAYSAC |
Ga0335007_0306588_885_1037 | 3300034283 | Freshwater | SSVAMNIGGLFVMPNVRAKLPAEACGVSLVCDGAEGAAHQAYAACRSGSA |
Ga0335007_0639114_498_605 | 3300034283 | Freshwater | MLPNVRAKLPAEAGAVSLVRDDAPCAADQAYSACRS |
Ga0335007_0699479_3_113 | 3300034283 | Freshwater | NVRATLPAEACSVSLMCEGAEGAAHQAYAACRSGSA |
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