Metagenome Family F058534

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058534
Family Type	Metagenome
Number of Sequences	135
Average Sequence Length	59 residues
Representative Sequence	EPATSAQIEPDSKGGVGESLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS
Number of Associated Samples	115
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.85 %
% of genes near scaffold ends (potentially truncated)	94.81 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.556 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (35.556 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.12% β-sheet: 0.00% Coil/Unstructured: 65.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF00221	Lyase_aromatic	34.07
PF13673	Acetyltransf_10	4.44
PF02575	YbaB_DNA_bd	2.96
PF12847	Methyltransf_18	2.22
PF07690	MFS_1	2.22
PF13649	Methyltransf_25	1.48
PF13365	Trypsin_2	1.48
PF04545	Sigma70_r4	1.48
PF12681	Glyoxalase_2	1.48
PF01175	Urocanase	1.48
PF00285	Citrate_synt	1.48
PF00005	ABC_tran	1.48
PF00211	Guanylate_cyc	1.48
PF13559	DUF4129	1.48
PF01906	YbjQ_1	0.74
PF01411	tRNA-synt_2c	0.74
PF02146	SIR2	0.74
PF07730	HisKA_3	0.74
PF01139	RtcB	0.74
PF09939	DUF2171	0.74
PF13424	TPR_12	0.74
PF00574	CLP_protease	0.74
PF07676	PD40	0.74
PF13517	FG-GAP_3	0.74
PF01909	NTP_transf_2	0.74
PF05050	Methyltransf_21	0.74
PF02525	Flavodoxin_2	0.74
PF10944	DUF2630	0.74
PF13489	Methyltransf_23	0.74
PF00196	GerE	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	34.07
COG0718	DNA-binding nucleoid-associated protein YbaB/EfbC	Transcription [K]	2.96
COG0372	Citrate synthase	Energy production and conversion [C]	1.48
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.48
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.48
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.48
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	1.48
COG0013	Alanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.74
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.74
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.74
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.74
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.74
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.74
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.56 %
Unclassified	root	N/A	24.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.56 %
Unclassified	root	N/A	24.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.56 %
Unclassified	root	N/A	24.44 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.96 %
Unclassified	root	N/A	24.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.96 %
Unclassified	root	N/A	24.44 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	47.41 %
Unclassified	root	N/A	24.44 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.74 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	45.19 %
Unclassified	root	N/A	24.44 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.74 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	45.19 %
Unclassified	root	N/A	24.44 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig120677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300001401\|JGI20189J14885_1029758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300001536\|A1565W1_10052976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300001867\|JGI12627J18819_10331805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300002568\|C688J35102_118668495	Not Available	583	Open in IMG/M
3300005175\|Ga0066673_10883227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300005181\|Ga0066678_10733192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300005181\|Ga0066678_11013056	Not Available	538	Open in IMG/M
3300005184\|Ga0066671_10946988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300005187\|Ga0066675_10026260	Not Available	3360	Open in IMG/M
3300005187\|Ga0066675_10703710	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005187\|Ga0066675_11196731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300005366\|Ga0070659_100997307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300005434\|Ga0070709_10406567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300005438\|Ga0070701_10768907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300005440\|Ga0070705_100906608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300005445\|Ga0070708_100589847	Not Available	1048	Open in IMG/M
3300005445\|Ga0070708_101819807	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005450\|Ga0066682_10764124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300005518\|Ga0070699_100060493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3282	Open in IMG/M
3300005529\|Ga0070741_10115803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2786	Open in IMG/M
3300005530\|Ga0070679_100450362	Not Available	1232	Open in IMG/M
3300005536\|Ga0070697_101264756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300005538\|Ga0070731_10401710	Not Available	911	Open in IMG/M
3300005546\|Ga0070696_100987374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300005549\|Ga0070704_100304773	Not Available	1329	Open in IMG/M
3300005552\|Ga0066701_10150920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1399	Open in IMG/M
3300005552\|Ga0066701_10901055	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005552\|Ga0066701_10958341	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005556\|Ga0066707_10104680	Not Available	1743	Open in IMG/M
3300005556\|Ga0066707_10420155	Not Available	869	Open in IMG/M
3300005558\|Ga0066698_10859926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300005558\|Ga0066698_10977404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300005559\|Ga0066700_11058028	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005561\|Ga0066699_10815056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300005574\|Ga0066694_10142837	Not Available	1133	Open in IMG/M
3300005575\|Ga0066702_10368299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300005575\|Ga0066702_10542239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300005587\|Ga0066654_10502853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300005713\|Ga0066905_101919874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300005764\|Ga0066903_106009868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300005764\|Ga0066903_107990566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300005902\|Ga0075273_10003804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2587	Open in IMG/M
3300006031\|Ga0066651_10274415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300006032\|Ga0066696_10542282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300006032\|Ga0066696_10983766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300006034\|Ga0066656_11126531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300006058\|Ga0075432_10024763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2058	Open in IMG/M
3300006797\|Ga0066659_10735117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300006800\|Ga0066660_10630104	Not Available	893	Open in IMG/M
3300006804\|Ga0079221_11649319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300006904\|Ga0075424_100075488	All Organisms → cellular organisms → Bacteria	3532	Open in IMG/M
3300007076\|Ga0075435_101357016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300009012\|Ga0066710_100909126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1355	Open in IMG/M
3300009012\|Ga0066710_102125454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300009092\|Ga0105250_10186549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300009137\|Ga0066709_104484265	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300010321\|Ga0134067_10152285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300010325\|Ga0134064_10242423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300010325\|Ga0134064_10423822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300010329\|Ga0134111_10240811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300010333\|Ga0134080_10203790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300010333\|Ga0134080_10412081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300010335\|Ga0134063_10387943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300010337\|Ga0134062_10741975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300012198\|Ga0137364_10164588	Not Available	1611	Open in IMG/M
3300012198\|Ga0137364_10691929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300012199\|Ga0137383_11003962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300012200\|Ga0137382_10423383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	940	Open in IMG/M
3300012206\|Ga0137380_11266678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300012207\|Ga0137381_10204694	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300012354\|Ga0137366_10340960	Not Available	1098	Open in IMG/M
3300012354\|Ga0137366_10646337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300012355\|Ga0137369_10945379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300012358\|Ga0137368_10628722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300012360\|Ga0137375_11234451	Not Available	569	Open in IMG/M
3300012361\|Ga0137360_10551448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	984	Open in IMG/M
3300012929\|Ga0137404_10033712	Not Available	3808	Open in IMG/M
3300012960\|Ga0164301_11457926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300012975\|Ga0134110_10250722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300012984\|Ga0164309_10045950	Not Available	2501	Open in IMG/M
3300012989\|Ga0164305_10266026	Not Available	1248	Open in IMG/M
3300014056\|Ga0120125_1185052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300014968\|Ga0157379_12122109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300015356\|Ga0134073_10389665	Not Available	522	Open in IMG/M
3300015359\|Ga0134085_10308101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300017659\|Ga0134083_10423777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300017936\|Ga0187821_10099713	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300017966\|Ga0187776_10544089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	801	Open in IMG/M
3300017994\|Ga0187822_10309813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300018071\|Ga0184618_10047736	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300018089\|Ga0187774_10715531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300018482\|Ga0066669_11076800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300018482\|Ga0066669_12449262	Not Available	501	Open in IMG/M
3300020170\|Ga0179594_10036325	Not Available	1603	Open in IMG/M
3300021344\|Ga0193719_10058632	Not Available	1670	Open in IMG/M
3300025888\|Ga0209540_10173702	Not Available	1291	Open in IMG/M
3300025904\|Ga0207647_10794302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300025906\|Ga0207699_10337085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1061	Open in IMG/M
3300025923\|Ga0207681_10915228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300025928\|Ga0207700_10169901	Not Available	1818	Open in IMG/M
3300025939\|Ga0207665_10000828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20934	Open in IMG/M
3300025960\|Ga0207651_10558968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	996	Open in IMG/M
3300026540\|Ga0209376_1225288	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300026547\|Ga0209156_10060617	Not Available	1970	Open in IMG/M
3300026547\|Ga0209156_10328153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300026550\|Ga0209474_10778611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300027842\|Ga0209580_10150999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1143	Open in IMG/M
3300027869\|Ga0209579_10265520	Not Available	923	Open in IMG/M
3300028577\|Ga0265318_10331970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300028592\|Ga0247822_10861275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300028711\|Ga0307293_10006668	All Organisms → cellular organisms → Bacteria	3113	Open in IMG/M
3300028715\|Ga0307313_10127230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300028718\|Ga0307307_10186114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300028720\|Ga0307317_10222817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	637	Open in IMG/M
3300028755\|Ga0307316_10243803	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300028771\|Ga0307320_10045864	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300028810\|Ga0307294_10387328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300028819\|Ga0307296_10095472	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300028819\|Ga0307296_10144326	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300028875\|Ga0307289_10318342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300028878\|Ga0307278_10474015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300030336\|Ga0247826_11122890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1040463	Not Available	978	Open in IMG/M
3300031251\|Ga0265327_10384265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300031782\|Ga0318552_10416328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	685	Open in IMG/M
3300031799\|Ga0318565_10450446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300031908\|Ga0310900_10226609	Not Available	1331	Open in IMG/M
3300031912\|Ga0306921_12480723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300032075\|Ga0310890_10176432	Not Available	1442	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.11%
Host-Associated	Host-Associated	8.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Plants	Host-Associated → Plants	8.89%
Aquatic	Environmental → Aquatic	2.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.41%
Freshwater	Environmental → Aquatic → Freshwater	1.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.48%
Sediment	Environmental → Aquatic → Sediment	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.11%
Loam	Environmental → Terrestrial → Soil → Loam	14.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%
Sand	Environmental → Terrestrial → Soil → Sand	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.37%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.22%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.48%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.74%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300001401	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005902	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_02828460	2124908032	Soil	GEYLEPATSGVIEPDSKGGLGETLRADVREIEAKVVAPTQRHEHSIGLGERIALFFSRRK
JGI20189J14885_10297581	3300001401	Arctic Peat Soil	TTAAIEPDSKGGFGASVGAELREIEGKVLAPVQTHEHSMNIVRRIGFFFRRLR*
A1565W1_100529763	3300001536	Permafrost	PEQVGQLDEYLEPATSAEIEPDSKGGIGESIGAEIRHVEGELFAPTQRHEHPMNIWRRIAFFFRRRAS*
JGI12627J18819_103318051	3300001867	Forest Soil	DHGGLGESIGAEARKLEGEAFAPTQRHEHPMNIWRRIAFYFRRLFARG*
C688J35102_1186684951	3300002568	Soil	PATSLEVEPDSRAGSGVAAEARELEADAVAPIQRREHSMNIWRRIWFFIRRRRGR*
Ga0066673_108832272	3300005175	Soil	LEPATSAEIEGDNRGGLGESIGAEARELEGKVFAPTQKREHSMNIWRRIAFFVRRLFRR*
Ga0066678_107331922	3300005181	Soil	EYLEPATSAEIEPDSKGGFGEALAADVREVEAKVLAPTQRHEHSMNIWRRIAFFFRRLTR
Ga0066678_110130561	3300005181	Soil	QLPEYLEPATSLEVEPESKGGLGESVGAELRELESDVVAPIQEHEHPMNVWRRLAFFFRRLRR*
Ga0066671_109469882	3300005184	Soil	TSAEIEPDSKGGIGESLAADARELEGKVLAPTQRHEHSMNIWRRIAFFFRRLIR*
Ga0066675_100262601	3300005187	Soil	YREPATSAEIEPDSKGGIGESLAADARELEGKVLAPTQRHEHSMNIWRRIAFFFRRLIR*
Ga0066675_107037101	3300005187	Soil	EPPTSAQIEPESESGFGERLASDAREVEGKLVAPTQRHEHSMNVWRRLAFFFRRLLR*
Ga0066675_111967311	3300005187	Soil	QIEPDSKGGIGESLSADARELEGKALAPTQRREHSMNIWRRIAFFFRRLFG*
Ga0070659_1009973071	3300005366	Corn Rhizosphere	SEGGIGESVSAEARKLEGKAFAPTQSEEHSMNIWRRIAFFFRRLFS*
Ga0070709_104065671	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	EQVEHLGEYLEPATSAEIEPDSKGGIGESLRSEGRELEGKVLAPTQRHEHSMNVWRRIAFFFRRLFH*
Ga0070701_107689071	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	EPATSAQIEPNSKGGIGESVSAEARKLEGKAFAPTQNQEHSMNIWRRIAFFFRRLFS*
Ga0070705_1009066081	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LDEYLEPATSAEIEADNKSGFGASVRAEARELEGKAFAPTQKREHSMNVWRRIAFFFRRLFRR*
Ga0070708_1005898471	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SAQIEPNSKGGMGESVRAEARELEGKAFAPTQRQEHSMNIWRRIAFFFRRLFS*
Ga0070708_1018198072	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SPEQVERLDEYLEPATSAEIEADNKSGFGASVRAEARELEGKAFAPTQKREHSMNVWRRIAFFFRRLFRR*
Ga0066682_107641242	3300005450	Soil	NKRGVGESIGAEARELEGKVFAPTQKREHSMNIWRRVAFFFRRLFR*
Ga0070699_1000604931	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VVRLSLTREQVVQLDEYLEPATSAEIEPDSKGGLGETLAADVRELEAKVLAPTQRHEHPMNIWRRIAFFFRRLAG*
Ga0070741_101158031	3300005529	Surface Soil	VHVSLTSEQAERLGEYLEPATSAEIEPDSKGGGGESLGAEVREVEGKVFAPTQTHEHSMNVWRRIAFFFRRLRR*
Ga0070679_1004503622	3300005530	Corn Rhizosphere	PDSKGGVGESLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS*
Ga0070697_1012647562	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EIEADNRSGFGESIRAEARELEGKALAPTQKHEHSMNVWRRIAFFFRRRFR*
Ga0070731_104017103	3300005538	Surface Soil	AAQLGEYLEPATSAQIEPDSKGGVGQAVAADVRELEGKIDAPLQGHEHSMNIWRRLSFVIRRKRG*
Ga0070696_1009873742	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LEPATSAEIEPDSKGGIGESLRSEGRELEGKVLATTQRHEHSMNVWRRIAFFFRRLFH*
Ga0070704_1003047732	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	EHLGEYLEPATSAEIEPDSKGGIGESLRSEGRELEGKVLAPTQRHEHSMNVWRRIAFFFRRLFH*
Ga0070704_1012351452	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	FGASVRAEARELEGKAFAPTQKREHSMNVWRRIAFFFRRLFRR*
Ga0066701_101509204	3300005552	Soil	AEIEPDSNGGAGATLAADARELEGKVFAPIQRHEHSMNVWRRIAFFFRRRFR*
Ga0066701_109010552	3300005552	Soil	QLGEYLEPATSAEIEPDSKGGFGEALAADVREVEARVLAPTQRHEHPMNLWRRIAFFFRRLAG*
Ga0066701_109583411	3300005552	Soil	EQVDQLSEYLEPATTAEIESDGKGGFGETVRADARELEGKVFAPTQKREHSMNIWRRIAFFFRRLAG*
Ga0066707_101046801	3300005556	Soil	TTAEIEPDSKGGTGAELGAEVRKIEGEAFAPIQRHEHSMNLWRRIAFFFRRLFG*
Ga0066707_104201552	3300005556	Soil	AEIEPDSKGGLGETLGADARELEAKVLAPTQRHEHSMNIWRRIAFFFRRLAG*
Ga0066698_108599261	3300005558	Soil	EPDSRGGAGEAVSGEVRELEGKVVAPTQRQEHSMNIWRRIAFFFRRLFR*
Ga0066698_109774042	3300005558	Soil	ADSKGGPGETIGADIREIEAKEFAPIQRHEHSMNIWRRIAFFFRRKRG*
Ga0066700_110580282	3300005559	Soil	VAQLGEYLEPATSAEIEPDSKGGAGATLAADARELEGKVFAPIQRHEHSMNVWRRIAFFFRRRFR*
Ga0066699_108150561	3300005561	Soil	AEIEPDSKGGAGETLAADVRELEGKAFAPIQRHEHSMNIWRRIAFFFRRRFSS*
Ga0066694_101428371	3300005574	Soil	EPATSARIEPDSRGGAGEAVSGEVRELEGKVVAPTQRQEHSMNIWRRIAFFFRRLFR*
Ga0066702_103682991	3300005575	Soil	EPDSKGGIGESIGAEIREIEGDVFAPIQRHEHSMNIWRRIAFFFRRLAG*
Ga0066702_105422391	3300005575	Soil	QLGEYLEPATSAEIEGDNRAGLGASVGAEARELEGKVFAPTQKREHSMNLWRRIAFFFRRLFSR*
Ga0066654_105028532	3300005587	Soil	DSHGGAGEALSAEARELEGKVVAPTQRHEHSMNIWRRIAFFFRRLFR*
Ga0066905_1019198742	3300005713	Tropical Forest Soil	LEPATSAEIEADDRRGFGESVRAEARELEGRAVAPIQKHEHPMNIWRRTAFFFRRLFRR*
Ga0066903_1060098681	3300005764	Tropical Forest Soil	GLGEYLEPATSAVIEPDDRRGVGETIGADVRELEAKALAPTQRQEHSMNVWRRIAFWLERTLRRG*
Ga0066903_1079905663	3300005764	Tropical Forest Soil	EIEPDDHRGLGEQLGADVRELEGKAFAPTQKHEHSMNIWRRIAFYFRRFFS*
Ga0075273_100038045	3300005902	Rice Paddy Soil	LGEYREPATSAEIEPDSKGGAGEAIASDVREVEAKAFAPIERHEHPMNVWRRIAFFFRRMVR*
Ga0066651_102744154	3300006031	Soil	GGLGESIGAEAREIEGRVLAPTQHREHSMNVWRRIYFFVRRLLARE*
Ga0066696_105422822	3300006032	Soil	QVDQLGEYLEPATSAEIEGDNRGGLGESIGAEARELEGKVFAPTQKREHSMNIWRRIAFFFRRLFRR*
Ga0066696_109837661	3300006032	Soil	EQLGEYLEPATTAEIEPDSKGGLGETIAAEARELEGDAFAPIQRHEHPMNIWRRIAFFFRRKLS*
Ga0066656_111265311	3300006034	Soil	GDNRAGLGESVGAEARELEGKVFAPTQKREHSMNVWRRIAFFVRRLFRR*
Ga0075432_100247631	3300006058	Populus Rhizosphere	IEPDSRAGAGEAISAEARKLEGKAVAPTQRHEHSMNIWRRIAFFFRRLFR*
Ga0066659_107351171	3300006797	Soil	DSKGGIGESLGADARELEGKALAPTQRREHSMNVWRRIAFFFRRLFG*
Ga0066660_106301041	3300006800	Soil	KGGIGESLSSEGRKLEGKVLAPTQRHEHSMNVWRRIAFFFRRLFR*
Ga0079221_116493191	3300006804	Agricultural Soil	EVDDKRGFGETLRADVRELEAKEFAPIVRHEKPMNIWRRIAFFFIRKAR*
Ga0075424_1000754881	3300006904	Populus Rhizosphere	REQVEHLGEYREPATSARIEPDSRAGAGEAISAEARKLEGKAVAPTQRHEHSMNIWRRIAFFFRRLFR*
Ga0075435_1013570161	3300007076	Populus Rhizosphere	EPATSAEIEPDSKGGFGETVKADVREIEAKVVAPTERHEHSMNIWRRIAFFFRRRAR*
Ga0066710_1009091262	3300009012	Grasslands Soil	VHLSLTRERVALGEYLEPAASAEIEPDSKGGLGETLAADVREVEGKVLAPTQRHEHSMNIWRRIAFFFRRLAG
Ga0066710_1021254542	3300009012	Grasslands Soil	VVRLTLTRAEVAQLGEYLEPATSAEIEPDSKGGLGETLAADARELEAKVLAPTQRHEQSMNIWRRIAFFFRRLAG
Ga0105250_101865491	3300009092	Switchgrass Rhizosphere	TPAQVDQLGEFLEPATSAQIEPNSKGGIGESVRAEARELEGKAFAPTQNQEHSMNIWRRIAFFFRRLFS*
Ga0066709_1044842652	3300009137	Grasslands Soil	EPVGNAGAGATLAADAREVEGKVFAPIQRHEHSMNVWRRIAFFFRRRFR*
Ga0134067_101522852	3300010321	Grasslands Soil	GEYREPATSAEIEPDSKGGIGESLAADARELEGKVLAPTQRHEHSMNIWRRIAFFFRRLIR*
Ga0134064_102424232	3300010325	Grasslands Soil	LTRDQVDALPAYLEPATSLEVEPESKGGFAESVGAQLRELESDAVAPIQKREHPMNFWRRLAFFFRRLRK*
Ga0134064_104238221	3300010325	Grasslands Soil	EPDDKSGLGETIAADVRELEGKAVAPIQRHEHPMNIWRRIAFFFRRLIR*
Ga0134111_102408111	3300010329	Grasslands Soil	EPATSAQIEPNSKGGIGESLSADARELEGKAFAPTQDQEHSMNIWRRIAFFFRRVFS*
Ga0134080_102037901	3300010333	Grasslands Soil	TSAQIEPNSKGSIGESLSADARELEGKVLAPTQRHEHSMNLWRRIAFFFRRLFG*
Ga0134080_104120812	3300010333	Grasslands Soil	PDSKGGLGETLAADVRGVEGRVLAPTQRHEHPMNIWRRIAFFFRRLAG*
Ga0134063_103879431	3300010335	Grasslands Soil	IEGDNKAGLGASVGAEARELEGKVFAPTQKREHSMNVWRRIVFFFRRLVRR*
Ga0134062_107419752	3300010337	Grasslands Soil	DSKGGIGESLSADARELEGKVFAPTQRQQHSMNLWRRIAYFFRRLFR*
Ga0137364_101645882	3300012198	Vadose Zone Soil	EYREPATSAEIEADSKGGIGESLAADARELEGKVLAPTQRHEHSMNMWRRIAFFFRRLIR
Ga0137364_106919291	3300012198	Vadose Zone Soil	EPDSKGGVGESVASEARELEGKVFAPTQRHEHSMNIWRRIAFFFRRLAG*
Ga0137383_110039622	3300012199	Vadose Zone Soil	PPLGFGESVEAEMRKVECELFAPIQRHEHSMNIWRRIALFFRRSAH*
Ga0137382_104233832	3300012200	Vadose Zone Soil	REPATSAEIETDSKGGLSETLAADARELEAKVLAPTQRHEHSMNIWRRIAFFFRRLAG*
Ga0137380_112666781	3300012206	Vadose Zone Soil	PDSKGGFGETLAADLREIEGKVLAPTQRHEHSMNIWRRVAFFFRRLASRT*
Ga0137381_102046943	3300012207	Vadose Zone Soil	LEPATSAEIEPDSKAGFGETLAADLREIEGKVLAPTQRHEHSMNIWRRVAFFFRRLASRT
Ga0137367_103979971	3300012353	Vadose Zone Soil	RGGIGESLGAEIREVEGDIFAPTQRHEHPMNIWRRIAFFFRRRAG*
Ga0137366_103409604	3300012354	Vadose Zone Soil	AEIEPDSKGGLGETLAADVRELEGKVLAPTQRHEHPMNIWRRIAFFFRRLAG*
Ga0137366_106463372	3300012354	Vadose Zone Soil	LSLTEEQVRQLGEYLEPATSAEITPDTKGGIGASIGAEMREIEGEVFAPTQRHEHSMNIWRRI
Ga0137369_109453791	3300012355	Vadose Zone Soil	VVEPDSKGAAWAESSSGEVREIEGKVLAPTQRRELSMNIWRRIAFFFR
Ga0137368_106287224	3300012358	Vadose Zone Soil	AEIQPDSRGGIGESLGAEIREVEGDIFAPTQRHEHPMNIWRRIAFFFRRRAG*
Ga0137375_112344512	3300012360	Vadose Zone Soil	EQVEQLGEYLEPATSAQIEAESKRGLGESLGAEARELESEVVAPPKHERSLNIWQRLALFYRRLRR*
Ga0137360_105514482	3300012361	Vadose Zone Soil	DVYLEPATSATIATNGKGRIGETLRADVRELEGKAFAPTQQHEHHMNIWRRIAFFFRRRAG*
Ga0137404_100337121	3300012929	Vadose Zone Soil	LEPATSAQIEPNSKGGIGESLSSEARELEGKAFAPTQDQEHSMNIWRRIAFFFRRVFS*
Ga0164301_114579262	3300012960	Soil	GDFLETATSAEIEPSDHRGVGEELGAEVRELEGKAFAPTQKHEHEMNIWRRIAFYFRRLFT*
Ga0134110_102507221	3300012975	Grasslands Soil	NRGGLGESVGAEARELEGKVFAPTQKREHSMNVWRRIAFFFRRLFRR*
Ga0164309_100459504	3300012984	Soil	DSKGGIGESLRSEGRELEGKVLAPTQRHEHSMNVWRRIAFFLRRLFS*
Ga0164305_102660261	3300012989	Soil	EIEPDSKGGIGESLSSEGRKLEGKVLAPTQRHEHSMNVWRRIAFFFRRLFH*
Ga0120125_11850521	3300014056	Permafrost	TITPAHAAELGEYLEPATSAEIEPDSKGGIGEALGADLRELEGKVVAPIQRHEHSMNIWRRIAFFFGHKTS*
Ga0157379_121221092	3300014968	Switchgrass Rhizosphere	RLSLTPAQVDQLGEYLEPATSAQIEPNSKGGMGESVRAEARELEGKAFAPTQRQEHSMNIWRRIAFFFRRLFS*
Ga0134073_103896651	3300015356	Grasslands Soil	DSRAGSGLAADARELEADAVAPIQRREHSMNIWRRIWFFIRRRRGR*
Ga0134085_103081012	3300015359	Grasslands Soil	PNSKGGIGESLSSEARELEGKAFAPTQDQEHSMNIWRRIAFFFRRLFS*
Ga0134083_104237772	3300017659	Grasslands Soil	EYLEPATSAQIEPNSKGGIGESLSSEARELEGKAFAPTQDQEHSMNIWRRIAFFFRRLFS
Ga0187821_100997132	3300017936	Freshwater Sediment	DQAETLGEYLEPATSAEIEPDSKGGLGESLGADVREIEAKAFAPIETHEHSMNIYRRIGFFFRRLFK
Ga0187776_105440892	3300017966	Tropical Peatland	FGEYLEPATSARIDPDDRSGFGEKVAADLRKVEAKAFAPTQRHEHSMNMWRRIGFWFRRTLGRG
Ga0187822_103098133	3300017994	Freshwater Sediment	ADIEPDSKGGVGESLAADAREVEGKVFAPTQTHEHSMNVWRRIAFFFRRLRR
Ga0184618_100477363	3300018071	Groundwater Sediment	VQLDEYLEPATSAEIEPDSKGGLGETLAADVRELEAKVLAPTQRHEHPMNIWRRIAFFFRRLAG
Ga0187774_107155311	3300018089	Tropical Peatland	EQAERLGEYLEPATSAEIEPDSKGGFGEAISADVREIEGKAVAPTQRHEHSMNIWRRIAFFFRRERG
Ga0066669_110768002	3300018482	Grasslands Soil	SLTREQVGRLGEYLEPATSAEIEPDSKGGFGESVASEAREVEGKVFAPTQRHEHSMNIWRRIAFFFRRLFRR
Ga0066669_124492622	3300018482	Grasslands Soil	RLALSHEQCAALGEYREPATSLEVEPDSKGGAGKTLAADVREVESDVVAPIQSHEHSMNIFRRIAFFIRRKRGR
Ga0193700_10424562	3300019873	Soil	GGIGESLSADARELEGKAFAPTQRQEHSMNIWRRIAFFFRRLFS
Ga0179594_100363251	3300020170	Vadose Zone Soil	VRLSLTREQVEQLGEFLEPATSAEIEPDSKGGIGESLSSEGRKLEGKVLAPTQRHEHSMNVWRRTAFFFRRLFR
Ga0193719_100586321	3300021344	Soil	SKGGIGESLSSEARKLEGKALAPTQRREHSMNVWRRVGFFFRRLFKRSVG
Ga0209540_101737021	3300025888	Arctic Peat Soil	LEPATSEEIEPDSKGGLGESLRAEVREVEGKVFAPTQRHEHSMGIWRRIGFFLRRQRG
Ga0207647_107943022	3300025904	Corn Rhizosphere	AQIEPNSKGGMGESVRAEARELEGKAFAPTQRQEHSMNIWRRIAFFFRRLFS
Ga0207699_103370851	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TVRLSLTPAQVERLVEYLEPATSAQIDPDSKGGVGASLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS
Ga0207681_109152281	3300025923	Switchgrass Rhizosphere	VRLSLTPAQVERLVEYLEPATSAQIEPDSKGGVGESLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRR
Ga0207700_101699012	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SAEIEPDSKGGIGESLSSEGRKLEGKVLAPTQRREHSMNVWRRIAFFFRRLFH
Ga0207665_1000082826	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TLTRAQVEQLGEYLEPATSAEIEPDSKGGAGETLAAEARELESKVFAPIQRHEHSMNIWRRIAFFFRRR
Ga0207651_105589682	3300025960	Switchgrass Rhizosphere	VERLVEYLEPATSAQIEPDSKGGVGESLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS
Ga0207640_120511342	3300025981	Corn Rhizosphere	GGIGESVSAEARKLEGKAFAPTQSEEHSMNIWRRIAFFFRRLFS
Ga0209376_12252881	3300026540	Soil	EVEPDSKGGFGESLAADVREVESDVFAPIQRHEHPMNLWRRLAFFFRRLVK
Ga0209156_100606173	3300026547	Soil	REQIGQLGEYREPATSAEIEPDSKGGIGESLAADARELEGKVLAPTQRHEHSMNIWRRIAFFFRRLIR
Ga0209156_103281531	3300026547	Soil	QVEHLDEYREPATSARIEPDSHGGAGEALSAEARELEGKVVAPTQRHEHSMNIWRRIAFFFRRLFR
Ga0209474_107786111	3300026550	Soil	LKLTKEQVDQLGEYLEPATSAEIEGDNRGGLGESIGAEARELEGKVFAPTQKREHSMNIWRRIAFFFRRLFRR
Ga0209580_101509993	3300027842	Surface Soil	TDEQAAALGEYLEPATSSEIEPDSKGGLGASIGADVRRLEGKAFAPIEKREHSMNIYRRIAFFFRRLFK
Ga0209579_102655202	3300027869	Surface Soil	IDAEEAAQLGEYLEPATSAQIEPDSKGGVGQAVAADVRELEGKIDAPLQGHEHSMNIWRRLSFVIRRKRG
Ga0265318_103319702	3300028577	Rhizosphere	AEQAAQLGEYREPATSAQIEPDSKGGAGEALAADVRELESKVDAPLQGHEHSMNFWRRIAFALRRKRG
Ga0247822_108612751	3300028592	Soil	GGIGESVRAEARELEGKAFAPTQNQEHSMNIWRRIAFFFRRLFS
Ga0307293_100066684	3300028711	Soil	RLSLTPAQVDQLGEYLEPATSAQIEPDSKGGIGESLSADARELEGKAFAPTQRQEHSMNIWRRIAFFFRRLFS
Ga0307313_101272301	3300028715	Soil	YLEPATSAQIEPDSKGGIGESLSADARELEGKAFAPTQRQEHSMNIWRRIAFFFRRLFS
Ga0307307_101861142	3300028718	Soil	PATSAEIEPDSKGGLGETVASEARELEGKVFAPTQRHEHSMNISRRIAFFFRRLFRR
Ga0307317_102228171	3300028720	Soil	EPATSEEVEPESTGGLAETARADIREIEGKVLAPTQRHEHSMNIWRRIAFWLRRSIR
Ga0307316_102438031	3300028755	Soil	VSLTLTRTQVEQLDEYLEPATSEQVEPESQGGLGETVRGDIREIEGRVLAPTQRHEHSMNLWRRISFWFRRRTR
Ga0307320_100458641	3300028771	Soil	TRAQVEQLDEYLEPATSVQVEPESQGGLGETVRGDIREIEGKVLAPTQRHEHSMNLWRRISFWFRRRTR
Ga0307294_103873283	3300028810	Soil	YLEPATSAEIEPDSKGGVGETLAADARKLEGKAFAPTQTHEHSMNFWRRLAFYFRRLGR
Ga0307296_100954721	3300028819	Soil	TRAQVEQLDEYLEPATSVQVEPESQGGLGETVRGDIREIEGKVLAPTQRHEHSMNLWQRIAFWFRRRTR
Ga0307296_101443263	3300028819	Soil	LGEYLEPATSAEIEPDSKGGLGETVASEARELEGKVFAPTQRHEHSMNLSRRIAFFFRRLLRR
Ga0307289_103183421	3300028875	Soil	EQVAQLGEYLEPATSAEIEPGSKGGLGETLAADVRELEAKVLAPTQRHEHSMNIWRRIAFFFRRLVG
Ga0307278_104740152	3300028878	Soil	ATSAQIEPDSKGGIGESLSADARELEGKVLAPTQRREHSMNLWRRIAFFFRRLFG
Ga0247826_111228902	3300030336	Soil	EYLEPATSAQIEPNSKGGVGESVRAEARELEGKAFAPTQNQEHSMNIWRRIAFFFRRLFS
(restricted) Ga0255311_10404632	3300031150	Sandy Soil	PATTAEIEPDSKGGLGEALGSDVRELEAKAFAPIEKREHSMNVYRRIGFFFRRLFK
Ga0265327_103842652	3300031251	Rhizosphere	EPATTAEIEPDSKGGLGESIGAELRELEGDVLAPTQRREHSMNIWRRIAFFFRRLR
Ga0170818_1069716201	3300031474	Forest Soil	GGIGETLRADVRELEGKAFAPTQQHEHHMNVWRRIAFFFRRRAG
Ga0318552_104163282	3300031782	Soil	MFIECSCFWIGATSAEIEADSKGGIANSVGAELRELEGDAVAPIQKHEHSMNIWRRI
Ga0318565_104504461	3300031799	Soil	EQVGGLGEYLEPATSAEIEADSKGGIANSVGAELRELEGDAVAPIQKHEHSMNIWRRIAFFFRRLFS
Ga0310900_102266091	3300031908	Soil	EPATSAQIEPDSKGGVGESLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS
Ga0306921_124807231	3300031912	Soil	GLGEYLEPATSAEIEADSKGGIANSVGAELRELEGDAVAPIQKHEHSMNIWRRIAFFFRRLFS
Ga0310890_101764322	3300032075	Soil	VRLSLTPAQVERLVEYLEPATSAQIEPDSKGGVGESLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters