NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F058438

Metagenome / Metatranscriptome Family F058438

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058438
Family Type Metagenome / Metatranscriptome
Number of Sequences 135
Average Sequence Length 46 residues
Representative Sequence MMMAEVPEALAKEPLSPVLASQLETIVPSGREFTGKILPTERPALEPA
Number of Associated Samples 121
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 82.22 %
% of genes near scaffold ends (potentially truncated) 33.33 %
% of genes from short scaffolds (< 2000 bps) 100.00 %
Associated GOLD sequencing projects 114
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Eukaryota (87.407 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(34.815 % of family members)
Environment Ontology (ENVO) Unclassified
(17.778 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(54.074 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 19.74%    β-sheet: 0.00%    Coil/Unstructured: 80.26%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF00181Ribosomal_L2 18.52
PF03947Ribosomal_L2_C 17.78
PF01201Ribosomal_S8e 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG0090Ribosomal protein L2Translation, ribosomal structure and biogenesis [J] 36.30
COG2007Ribosomal protein S8ETranslation, ribosomal structure and biogenesis [J] 0.74


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.41 %
UnclassifiedrootN/A12.59 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001355|JGI20158J14315_10053568All Organisms → cellular organisms → Eukaryota1677Open in IMG/M
3300001972|GOS2216_10090510All Organisms → cellular organisms → Eukaryota1751Open in IMG/M
3300003684|Ga0005851_1002254All Organisms → cellular organisms → Eukaryota928Open in IMG/M
3300004241|Ga0066604_10090203All Organisms → cellular organisms → Eukaryota1213Open in IMG/M
3300004463|Ga0063356_103725030Not Available656Open in IMG/M
3300004463|Ga0063356_106156603All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia514Open in IMG/M
3300004765|Ga0007745_1296604All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia793Open in IMG/M
3300004789|Ga0007752_10011632All Organisms → cellular organisms → Eukaryota1004Open in IMG/M
3300004792|Ga0007761_11123563All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia642Open in IMG/M
3300004793|Ga0007760_10038647All Organisms → cellular organisms → Eukaryota1053Open in IMG/M
3300004794|Ga0007751_11495168All Organisms → cellular organisms → Eukaryota1118Open in IMG/M
3300005069|Ga0071350_1031023All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia1418Open in IMG/M
3300005662|Ga0078894_10512916All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia1075Open in IMG/M
3300005988|Ga0075160_10399596All Organisms → cellular organisms → Eukaryota746Open in IMG/M
3300006165|Ga0075443_10067426All Organisms → cellular organisms → Eukaryota1211Open in IMG/M
3300006374|Ga0075512_1289069All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales591Open in IMG/M
3300006379|Ga0075513_1371338All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales574Open in IMG/M
3300006424|Ga0075497_1524094All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales700Open in IMG/M
3300006876|Ga0079217_10909451All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia629Open in IMG/M
3300007715|Ga0102827_1109687Not Available626Open in IMG/M
3300009001|Ga0102963_1277028Not Available662Open in IMG/M
3300009003|Ga0102813_1163466Not Available692Open in IMG/M
3300009154|Ga0114963_10750842All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia503Open in IMG/M
3300009404|Ga0103853_1031708Not Available557Open in IMG/M
3300009436|Ga0115008_10355463All Organisms → cellular organisms → Eukaryota1039Open in IMG/M
3300009527|Ga0114942_1319961Not Available600Open in IMG/M
3300011119|Ga0105246_12430654All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia514Open in IMG/M
3300013004|Ga0164293_10538138Not Available766Open in IMG/M
3300014969|Ga0157376_12184085Not Available592Open in IMG/M
3300016882|Ga0186577_103393All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia1286Open in IMG/M
3300018410|Ga0181561_10180674All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia1050Open in IMG/M
3300018742|Ga0193138_1045258All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia579Open in IMG/M
3300018791|Ga0192950_1046052All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales641Open in IMG/M
3300018836|Ga0192870_1062096All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales639Open in IMG/M
3300018949|Ga0193010_10057354All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia642Open in IMG/M
3300019022|Ga0192951_10338944All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia570Open in IMG/M
3300019032|Ga0192869_10234004All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia791Open in IMG/M
3300019033|Ga0193037_10201936All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia676Open in IMG/M
3300019139|Ga0193047_1069996All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales702Open in IMG/M
3300020146|Ga0196977_1059963All Organisms → cellular organisms → Eukaryota901Open in IMG/M
3300020146|Ga0196977_1084413All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia741Open in IMG/M
3300020595|Ga0206126_10264360All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales784Open in IMG/M
3300021062|Ga0196974_1087645Not Available534Open in IMG/M
3300021373|Ga0213865_10461741All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia550Open in IMG/M
3300021936|Ga0063092_1172643All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales599Open in IMG/M
3300021941|Ga0063102_1025194All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales660Open in IMG/M
3300022529|Ga0242668_1099422All Organisms → cellular organisms → Eukaryota589Open in IMG/M
3300022561|Ga0212090_10794051All Organisms → cellular organisms → Eukaryota576Open in IMG/M
3300023063|Ga0233335_1036701Not Available979Open in IMG/M
3300024239|Ga0247724_1050681Not Available617Open in IMG/M
3300025640|Ga0209198_1118332All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia789Open in IMG/M
3300025933|Ga0207706_10345943All Organisms → cellular organisms → Eukaryota1293Open in IMG/M
3300026572|Ga0255270_1181425All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia523Open in IMG/M
3300027719|Ga0209467_1084355All Organisms → cellular organisms → Eukaryota1213Open in IMG/M
3300027805|Ga0209229_10097876All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia1321Open in IMG/M
3300027849|Ga0209712_10772353All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales526Open in IMG/M
3300027899|Ga0209668_10233686All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia1158Open in IMG/M
3300028137|Ga0256412_1288365All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia604Open in IMG/M
3300028282|Ga0256413_1351216All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia516Open in IMG/M
3300028290|Ga0247572_1137611All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales609Open in IMG/M
3300028575|Ga0304731_11239435All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales583Open in IMG/M
3300029908|Ga0311341_10487226Not Available704Open in IMG/M
3300029913|Ga0311362_10541718All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia1061Open in IMG/M
3300030503|Ga0311370_11805757All Organisms → cellular organisms → Eukaryota621Open in IMG/M
3300030508|Ga0302185_10311592All Organisms → cellular organisms → Eukaryota529Open in IMG/M
3300030531|Ga0210274_1152566All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata576Open in IMG/M
3300030531|Ga0210274_1909445All Organisms → cellular organisms → Eukaryota651Open in IMG/M
3300030532|Ga0210290_1173211All Organisms → cellular organisms → Eukaryota652Open in IMG/M
3300030536|Ga0210266_1058826All Organisms → cellular organisms → Eukaryota528Open in IMG/M
3300030539|Ga0210281_1197645All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia517Open in IMG/M
3300030539|Ga0210281_1331610All Organisms → cellular organisms → Eukaryota849Open in IMG/M
3300030539|Ga0210281_1577707All Organisms → cellular organisms → Eukaryota889Open in IMG/M
3300030548|Ga0210252_10847994All Organisms → cellular organisms → Eukaryota820Open in IMG/M
3300030549|Ga0210257_10567331All Organisms → cellular organisms → Eukaryota747Open in IMG/M
3300030550|Ga0247631_1033964All Organisms → cellular organisms → Eukaryota740Open in IMG/M
3300030551|Ga0247638_1043119All Organisms → cellular organisms → Eukaryota843Open in IMG/M
3300030556|Ga0257208_1166645All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia639Open in IMG/M
3300030564|Ga0210256_10315521All Organisms → cellular organisms → Eukaryota945Open in IMG/M
3300030564|Ga0210256_10794674All Organisms → cellular organisms → Eukaryota829Open in IMG/M
3300030569|Ga0247628_1260920All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia516Open in IMG/M
3300030570|Ga0247647_1262626All Organisms → cellular organisms → Eukaryota515Open in IMG/M
3300030576|Ga0247644_1171075All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia541Open in IMG/M
3300030578|Ga0210275_10385186All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia511Open in IMG/M
3300030579|Ga0247633_10313401All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia518Open in IMG/M
3300030585|Ga0247639_1173589All Organisms → cellular organisms → Eukaryota626Open in IMG/M
3300030588|Ga0210283_1668795All Organisms → cellular organisms → Eukaryota864Open in IMG/M
3300030590|Ga0247643_1130883All Organisms → cellular organisms → Eukaryota580Open in IMG/M
3300030591|Ga0247626_1065420All Organisms → cellular organisms → Eukaryota840Open in IMG/M
3300030592|Ga0247612_1051095All Organisms → cellular organisms → Eukaryota826Open in IMG/M
3300030594|Ga0210280_1167550All Organisms → cellular organisms → Eukaryota540Open in IMG/M
3300030601|Ga0247650_1014014Not Available861Open in IMG/M
3300030603|Ga0210253_10375160All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata544Open in IMG/M
3300030608|Ga0247651_10056535All Organisms → cellular organisms → Eukaryota867Open in IMG/M
3300030608|Ga0247651_10079421All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia794Open in IMG/M
3300030609|Ga0247634_10463752All Organisms → cellular organisms → Eukaryota546Open in IMG/M
3300030615|Ga0257185_10091117All Organisms → cellular organisms → Eukaryota831Open in IMG/M
3300030622|Ga0265391_10115082All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata706Open in IMG/M
3300030623|Ga0265392_1041709All Organisms → cellular organisms → Eukaryota819Open in IMG/M
3300030625|Ga0210259_10942729All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia824Open in IMG/M
3300030625|Ga0210259_11096348All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia761Open in IMG/M
3300030629|Ga0210268_1202845All Organisms → cellular organisms → Eukaryota634Open in IMG/M
3300030632|Ga0210250_11354736All Organisms → cellular organisms → Eukaryota821Open in IMG/M
3300030684|Ga0247617_1023189All Organisms → cellular organisms → Eukaryota747Open in IMG/M
3300030738|Ga0265462_10585392All Organisms → cellular organisms → Eukaryota842Open in IMG/M
3300030741|Ga0265459_12131622All Organisms → cellular organisms → Eukaryota677Open in IMG/M
3300030775|Ga0074021_1539209All Organisms → cellular organisms → Eukaryota720Open in IMG/M
3300030840|Ga0074020_10068766All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia506Open in IMG/M
3300030907|Ga0074013_11465438All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia602Open in IMG/M
3300030922|Ga0138300_1095929All Organisms → cellular organisms → Eukaryota856Open in IMG/M
3300030933|Ga0074039_11574079All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia616Open in IMG/M
3300030933|Ga0074039_11595980All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota638Open in IMG/M
3300030980|Ga0074027_11190418All Organisms → cellular organisms → Eukaryota807Open in IMG/M
3300031029|Ga0074012_11680402All Organisms → cellular organisms → Eukaryota765Open in IMG/M
3300031057|Ga0170834_111088809All Organisms → cellular organisms → Eukaryota835Open in IMG/M
3300031128|Ga0170823_16639039All Organisms → cellular organisms → Eukaryota581Open in IMG/M
3300031231|Ga0170824_111126739All Organisms → cellular organisms → Eukaryota677Open in IMG/M
3300031231|Ga0170824_121791425All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia516Open in IMG/M
3300031261|Ga0302140_10358288All Organisms → cellular organisms → Eukaryota1199Open in IMG/M
3300031378|Ga0308145_1046952All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia661Open in IMG/M
3300031446|Ga0170820_10471205All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia542Open in IMG/M
3300031446|Ga0170820_15255440All Organisms → cellular organisms → Eukaryota802Open in IMG/M
3300031469|Ga0170819_12221121All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia764Open in IMG/M
3300031622|Ga0302126_10193986Not Available728Open in IMG/M
3300031625|Ga0302135_10325425All Organisms → cellular organisms → Eukaryota616Open in IMG/M
3300031674|Ga0307393_1090571All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales661Open in IMG/M
3300031710|Ga0307386_10554692All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales605Open in IMG/M
3300031725|Ga0307381_10235590Not Available647Open in IMG/M
3300031742|Ga0307395_10346646All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia643Open in IMG/M
3300032756|Ga0315742_11019619Not Available822Open in IMG/M
3300032756|Ga0315742_11081236All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia806Open in IMG/M
3300032756|Ga0315742_11183068All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia782Open in IMG/M
3300032756|Ga0315742_11339271All Organisms → cellular organisms → Eukaryota750Open in IMG/M
3300034060|Ga0334983_0512462All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia670Open in IMG/M
3300034096|Ga0335025_0430629Not Available676Open in IMG/M
3300034362|Ga0326783_052285All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia592Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil34.81%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine9.63%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil8.15%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.67%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake4.44%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.22%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.22%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil2.22%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated2.22%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.96%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater1.48%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.48%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.48%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment0.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.74%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.74%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.74%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.74%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.74%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water0.74%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.74%
Glacier ValleyEnvironmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley0.74%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.74%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.74%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.74%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.74%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.74%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.74%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.74%
Leaf LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Leaf Litter0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.74%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.74%
Wastewater EffluentEngineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent0.74%

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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300001972Marine microbial communities from the Sargasso Sea - GS000dEnvironmentalOpen in IMG/M
3300003684Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA - 2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004241Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004765Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004789Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004792Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004793Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004794Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005069Metagenomes from Harmful Algal Blooms in Lake Erie, HABS-E2014-0024EnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005988Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C2 DNAEngineeredOpen in IMG/M
3300006165Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNAEnvironmentalOpen in IMG/M
3300006374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006379Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006424Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300007715Estuarine microbial communities from the Columbia River estuary - metaG S.751EnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009003Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725EnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009404Microbial communities of water from Amazon river, Brazil - RCM6EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009527Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold CreekEnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300016882Metatranscriptome of marine eukaryotic communities from Atlantic Ocean in f/2 medium with 33 psu seawater, 19 C, 33 psu salinity and 331 ?mol photons light - Strombidium rassoulzadegani ras09 (MMETSP0449_2)Host-AssociatedOpen in IMG/M
3300018410Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018742Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_022 - TARA_A100000534 (ERX1789653-ERR1719224)EnvironmentalOpen in IMG/M
3300018791Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001390 (ERX1782108-ERR1712085)EnvironmentalOpen in IMG/M
3300018836Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_066 - TARA_N000000807 (ERX1789715-ERR1719504)EnvironmentalOpen in IMG/M
3300018949Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_135 - TARA_N000002172 (ERX1782262-ERR1712034)EnvironmentalOpen in IMG/M
3300019022Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001390 (ERX1782474-ERR1712194)EnvironmentalOpen in IMG/M
3300019032Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_066 - TARA_N000000805 (ERX1782188-ERR1712216)EnvironmentalOpen in IMG/M
3300019033Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_040 - TARA_N000000067 (ERX1782334-ERR1712080)EnvironmentalOpen in IMG/M
3300019139Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001430 (ERX1809743-ERR1740120)EnvironmentalOpen in IMG/M
3300020146Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13CEnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300021062Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10-13CEnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021936Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-15M (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300021941Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-120M (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300022529Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022561Borup_combined assemblyEnvironmentalOpen in IMG/M
3300023063Leaf litter microbial communities from Shasta-Trinity National Forest, California, United States - GEON-DECOMP-222EnvironmentalOpen in IMG/M
3300024239Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-EEnvironmentalOpen in IMG/M
3300025640Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026572Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027719Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027849Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300028137Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_74 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028282Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_77 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028290Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 25R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028575Metatranscriptome of Marine eukaryotic phytoplankton communities from the Antarctic Ocean - ANT-7 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300029908II_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029913III_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030508Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_2EnvironmentalOpen in IMG/M
3300030531Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030532Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE108SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030536Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE043SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030539Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO151-VCO111SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030548Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR016SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030549Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030550Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb8 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030551Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030556Metatranscriptome of decayed wood fungal communities from Pinus contorta in Tenderfoot Creek Experimental Forest, Montana, United States - TCEF3-3E (Eukaryote Community Metatranscriptome)Host-AssociatedOpen in IMG/M
3300030564Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR020S0 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030569Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb5 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030570Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030576Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb9 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030578Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030579Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb10 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030585Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb4 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030588Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE011SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030590Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb8 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030591Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030592Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab1 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030594Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO141-VCO089SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030601Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030603Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR017SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030608Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb4 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030609Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb11 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030615Metatranscriptome of plant litter fungal communities from Pinus contorta in Bitterroot National Forest, Montana, United States - GP1-LITTER (Eukaryote Community Metatranscriptome)Host-AssociatedOpen in IMG/M
3300030622Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030623Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE043SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030625Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO122-ANR120SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030629Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030632Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR004SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030684Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb6 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300030775Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 9 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030840Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 8 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030907Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood TCEFB (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030922Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030933Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter N2 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030980Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus N2 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031029Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood TCEFA (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031261Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1EnvironmentalOpen in IMG/M
3300031378Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_319_33.10 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031622Marine microbial communities from Western Arctic Ocean, Canada - CB4_20mEnvironmentalOpen in IMG/M
3300031625Marine microbial communities from Western Arctic Ocean, Canada - CBN3_surfaceEnvironmentalOpen in IMG/M
3300031674Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-5.R1 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031710Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-2.R3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031725Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-1.R1 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031742Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-5.R3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M
3300034060Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016EnvironmentalOpen in IMG/M
3300034096Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098EnvironmentalOpen in IMG/M
3300034362Metatranscriptome of soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - S04 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20158J14315_1005356813300001355Pelagic MarinePEALANDPLSPSLPSQLETMVPSGMLLTGRIFPTESEAIK*
GOS2216_1009051023300001972MarineMTAEVPEALANEPLSPSLPSQFETMVPSGMELTGRIFPTESEAIK*
Ga0005851_100225423300003684Freshwater And SedimentMMAEQPEALAKEPLSPVLASQLEMMVPSGRPLTGKILPTERAALAPA*
Ga0066604_1009020323300004241FreshwaterMIMVEQPEALANEPLSPVLASQFETMVPSGRRLTGKILPTESAAIK*
Ga0063356_10372503013300004463Arabidopsis Thaliana RhizosphereMIAEEPLVLAKEPLSPVLASQFETMVPSGKTLTGKILPTDRDAIQ*
Ga0063356_10615660313300004463Arabidopsis Thaliana RhizosphereMMMAEVPEALAKLPLSPVLASQLETMVPSGREFTGKILPTERAAIK*
Ga0007745_129660433300004765Freshwater LakeMTAEVPEALANAPLSPTLPSQFDIIVPSGSKLTGRIFPTERDALVPA*
Ga0007752_1001163223300004789Freshwater LakeMMMAEQPEALAKEPLSPVLDSQFETMVPSGRPLTGKILPTERAALEPA*
Ga0007761_1112356313300004792Freshwater LakeMMAEVPEARAREPRSPSLASTLEMMVPSGIAFTGRILPTVSAALLPAYTNYPVYM
Ga0007760_1003864723300004793Freshwater LakeMMAEQPEALAKEPLSPVLASQLETMVPSGSPLTGKILPTERAALEPA*
Ga0007751_1149516833300004794Freshwater LakeMMAEQPEALAKEPLSPVLDSQFETMVPSGRPLTGKILPTERAALEPA*
Ga0071350_103102323300005069FreshwaterMMAEQPEALAKEPLSPVLDSQLETMVPSGRPLTGKILPTERAAIK*
Ga0078894_1051291623300005662Freshwater LakeMMAEQPEALAKEPLSPVLASQLEMMVPSGRPLTGKILPTERAAIK*
Ga0075160_1039959613300005988Wastewater EffluentMITVEVPDALAKEPLSPVLPSQLDTIVPSGRVFTGKILPTERVAIK*
Ga0075443_1006742623300006165MarineMTTAEVPEALAKAPLSPILPSQLETIVPSGMALTGRILPTERDAI*
Ga0075512_128906923300006374AqueousMTAEVPEALANEPLSPVLASQLETMLPSGMALTGRIFPTE
Ga0075513_137133823300006379AqueousMMTAEVPEALANEPLSPVLASQLETMVPSGMALTGR
Ga0075497_152409413300006424AqueousMMTAEVPEALANEPLSPSLASQLETMVPSGMLLTGRIFPTESEALVPA*
Ga0079217_1090945123300006876Agricultural SoilMMMVEVPEALEKEPLSPVFASQLDTIVPSGKRLTGRILPTDKDAIQ*
Ga0102827_110968723300007715EstuarineALANEPLSPSLPSQLETMVPSGMLLTGRIFPTESEAIK*
Ga0102963_127702813300009001Pond WaterMAEHPEALAKDPLSPILASQLETMVPSGSELTGRMFPMEREAKIQIST*
Ga0102813_116346613300009003EstuarineMMTADVPEALAKDPLSPSLPSQLATMVPSGMELTGRIFPIEREAIK*
Ga0114963_1075084213300009154Freshwater LakeMMMAEQPEALAKEPLSPVLASQLETMVPSGSPLTGKILPTERAAIK*
Ga0103853_103170813300009404River WaterAEQPEARAKEPLSPVFDSQLDTMVPSGRALTGKILPTERAALAPA*
Ga0115008_1035546323300009436MarineMAEVPEALAKDPLSPCLPSQLETMVPSGSELTGRMFPIEREAI*
Ga0114942_131996123300009527GroundwaterDALEKEPLSPTFASQLDTMVPSGSWLTGRMFPILRAAIQ*
Ga0105246_1243065413300011119Miscanthus RhizosphereMIIVEVPEALEKLPLSPVLASQLETIVPSGSWLTGRMFPTARDAI*
Ga0164293_1053813813300013004FreshwaterMAEQPEALAKEPLSPVLASQLETMVPSGSPLTGKILPTERAAIK*
Ga0157376_1218408513300014969Miscanthus RhizosphereMIIVEVPEALEKLPLSPVLASQLDTIVPSGSWLTGRMFPTARDAI*
Ga0186577_10339323300016882Host-AssociatedMTEEDPEALANEPLSPSLDSQLEMMVPSGRRFTGRMFPTEREAGESRIN
Ga0181561_1018067423300018410Salt MarshMTAEVPEALANEPLSPCLPSQFEIIVPSGMELTGRIFPTEREAIK
Ga0193138_104525823300018742MarineMTTAEVPDALANDPLSPSLPSQFEMMVPSGIALTGRML
Ga0192950_104605223300018791MarineMTAEVPEALANEPLSPSFPSQLETIVPSGMAFTGRI
Ga0192870_106209613300018836MarineMTAEVPEALANEPLSPSLPSQLETMVPSGMLLTGRIFPTESE
Ga0193010_1005735413300018949MarineMTAEVPDALANDPLSPSLPSQLETMVPSGIELTGRIFPTESEALVPA
Ga0192951_1033894413300019022MarineMTIAEVPEALAKEPLSPCLPSQFEMMVPSGREFTGRMFPIEREAFEPH
Ga0192869_1023400433300019032MarineMMTAEVPDDLANDPLSPSLPSQLDTMVPSGKALTGPM
Ga0193037_1020193623300019033MarineMTAEVPEALANEPLSPSFPSQLETMVPSGMAFTGRIFPT
Ga0193047_106999613300019139MarineMTAEVPEALANEPLSPSLPSQFETMVPSGMELTGRIFPTESEALVPA
Ga0196977_105996323300020146SoilMMTADVPEALAKEPLSPVFASQLETMVPSGSWFTGRIFPTESEAIQ
Ga0196977_108441323300020146SoilMMTADVPEALAKEPLSPVFASQLETMVPSGSWFTGRIFPTDSEAIQ
Ga0206126_1026436023300020595SeawaterMMTAEVPEALANEPLSPSLASQLETMVPSGMLLTGRIFPTESEAIK
Ga0196974_108764513300021062SoilMVAVPEALAKEPLSPVFASQLETIVPSGNKLTGRILPTERDAIQ
Ga0213865_1046174123300021373SeawaterMMTAEVPEALANCPLSPVLPSQLETMVPSGMVLTGRMFPIESDAIK
Ga0063092_117264313300021936MarineMTAEVPEALANEPLSPSFPSQLETIVPSGMAFTGRIFPTESEAL
Ga0063102_102519413300021941MarineMTAEVPEALANEPLSPSLASQLETMVPSGMLLTGRIFPTEREALVPA
Ga0242668_109942213300022529SoilMTAEVPEALANEPLSPVLPSQFETIVPSGSVFTGKILPTESEALEPA
Ga0212090_1079405123300022561Glacier ValleyMMMVEVPLALEKEPLSPVFASQLETIVPSGKMLTGRILPTERDAIQ
Ga0233335_103670113300023063Leaf LitterVPDALEKLPLSPVLASQLETMVPSGSWLTGRMFPTAREAIQ
Ga0247724_105068113300024239Deep Subsurface SedimentEVPEALANAPLSPCLPSQLEMIVPSGMRLTGRIFPTLREAI
Ga0209198_111833213300025640Pelagic MarineMTMAEVPEALANDPLSPILPSQLETIVPSGIEETGRMLPIERDAI
Ga0207706_1034594323300025933Corn RhizosphereMMMVDVPEALANEPLSPVLASQFETMVPSGRALTGRILPTDKDAIK
Ga0255270_118142513300026572FreshwaterMMMAEQPDALAKEPLSPVLASQFETMVPSGRAFTGKILPTERAAFAPA
Ga0209467_108435513300027719FreshwaterMIMVEQPEALANEPLSPVLASQFETMVPSGRRLTGKILPTESAAIK
Ga0209229_1009787623300027805Freshwater And SedimentMMAEQPEALAKEPLSPVLASQLEMMVPSGRPLTGKILPTERAAIK
Ga0209712_1077235313300027849MarineMTAEVPEALANDPLSPSFPSQLDTMVPSGMALTGRIFP
Ga0209668_1023368623300027899Freshwater Lake SedimentMTAEVPEALANAPLSPTLPSQFDIIVPSGSKLTGRIFPTERDAIL
Ga0256412_128836513300028137SeawaterMTTAEVPEALAKDPLSPSLPSQLETMVPSGIEFTGRIF
Ga0256413_135121613300028282SeawaterMITAEVPEALAKDPLSPILPSQLDTMVPSGMALTGRMLPMDNEALLPA
Ga0247572_113761113300028290SeawaterMTTAEVPEALAKDPLSPSLPSQLETIVPSGMAFTGRI
Ga0304731_1123943513300028575MarineMTAEVPEALANEPLSPSLPSQLETMVPSGMALTGRIF
Ga0311341_1048722613300029908BogAEQPEARAKLPLSPVLDSQLDTMVPSGSELTGKILPTESAAIK
Ga0311362_1054171823300029913BogMTADVPLALAKEPLSPVFPSQFETIVPSGRRFTGRILPTDRDAIVN
Ga0311370_1180575723300030503PalsaMTAEVPLALANDPLSPVFPSQLETMVPSGRRLTGKILPTESEAILINNKN
Ga0302185_1031159213300030508BogMMMVEVPEALEKEPLSPVLASQLETMVPSGKALTGKILPTERAAIQ
Ga0210274_115256623300030531SoilMITAEVPLALANDPLSPVFPSQFETMVPSGRRLTGKILPTESEAFEPAYT
Ga0210274_190944523300030531SoilMMMVEVPLALAKEPLSPVFPSQLDTIVPSGSVLTGKILPTERDALLPA
Ga0210290_117321123300030532SoilMIIADVPLALANDPLSPVFPSQFETMVPSGRRLTGKILPTESEAFEPAYTN
Ga0210266_105882613300030536SoilMMVDVPLALAKEPLSPVFPSQLDTIVPSGRRFTGKILPT
Ga0210281_119764513300030539SoilMMIAEVPLALANDPLSPVLASQFETMVPSGNVFTGRILPTAMDALA
Ga0210281_133161023300030539SoilMTVEVPEALANAPLSPVLPSQFETIVPSGSVFTGKILPTESEALEPA
Ga0210281_157770723300030539SoilMITAEVPLALAKDPLSPVLPSQLETIVPSGRRFTGKILPTESEALAPA
Ga0210252_1084799423300030548SoilMITVEVPLARAKEPLSPVLPSQFDTIVPSGNVLTGKILPTDRDALVPA
Ga0210257_1056733123300030549SoilMITADVPLALAKDPLSPVFPSQFETIVPSGRRFTGKIFPTERVALEPA
Ga0247631_103396423300030550SoilMIMVEVPEALAKEPLSPVLPSQLDTMVPSGRELTGKILPTESAALEPA
Ga0247638_104311923300030551SoilMMIADVPLALAKDPLSPVFPSQFETIVPSGSTFTGKILPTESEAFVPA
Ga0257208_116664513300030556Host-AssociatedMIVEVPEALEKEPLSPVLASQLETIVPSGSWLTGKMLPTANDAFYPA
Ga0210256_1031552113300030564SoilMMIVDVPLALAKEPLSPVFPSQFDTIVPSGRVLTGKILPTERDALLPA
Ga0210256_1079467423300030564SoilMMIAEVPLALANDPLSPVLASQFETMVPSGNVFTGKILPTARDALAPAYTY
Ga0247628_126092013300030569SoilMITADVPLALAKDPLSPVFPSQLETIVPSGSRLTGKILPTESE
Ga0247647_126262613300030570SoilMMMVEVPDALANEPLSPVLASQFETMVPSGSELTGKILPTDSAALEPA
Ga0247644_117107523300030576SoilMMIADVPLALAKDPLSPVFPSQFETIVPSGSTFTGKILPTESG
Ga0210275_1038518613300030578SoilMITAEVPLALAKDPLSPVLPSQLETIVPSGRRFTGKILPTESEAL
Ga0247633_1031340123300030579SoilMMMADVPEALAKLPLSPVLASQLLTMVPSGIVLTGKMFPTA
Ga0247639_117358913300030585SoilMMMVEVPLALAKEPLSPVLPSQFETMVPSGSVLTGKILPTERDALLPA
Ga0210283_166879523300030588SoilMMTTDVPLALAKDPLSPVFPSQLETIVPSGRRLTGKILPTESEALEPA
Ga0247643_113088323300030590SoilMIMVDVPEALAKEPLSPVLPSQLETMVPSGRVLTGKILPTERAALEPA
Ga0247626_106542023300030591SoilMMMADVPEALAKEPLSPVLASQLETIEPSGRAFTGRILPTEIAALEPA
Ga0247612_105109513300030592SoilMTAEVPEALAKDPLSPVLPSQFETIVPSGNWFTGKILPTESEALAPAYTN
Ga0210280_116755013300030594SoilMMMVEVPLALAKEPLSPVFPSQLDTMVPSGSVLTGKILPTERDALLPA
Ga0247650_101401423300030601SoilMITADVPLALAKDPLSPVFPSQLETIVPSGSRLTGKILPTESEAFEPA
Ga0210253_1037516023300030603SoilMTADVPLALANDPLSPVFPSQFETMVPSGRRLTGKILPTESE
Ga0247651_1005653523300030608SoilMITVEVPLALAKEPLSPVFPSQFETIVPSGRVFTGKILPTDRDALVPA
Ga0247651_1007942123300030608SoilMMMADVPDALAKDPLSPVLASQLETIVPSGKRFTGKIFPTESEAFEPA
Ga0247634_1046375213300030609SoilMMTAEVPEALANDPLSPVLPSQLATMVPSGRVFTGRILPTESDAFEPA
Ga0257185_1009111723300030615Host-AssociatedMTAEVPEALANEPLSPVLPSQFETIVPSGNWFTGKILPTESEALEPAYTN
Ga0265391_1011508213300030622SoilAEVPLALAKDPLSPVFPSQLDTIVPSGRRFTGKILPTESEALAPA
Ga0265392_104170913300030623SoilMMMVEVPLALAKEPLSPVFPSQLDTMVPSGSVLTGKILPTERDALLQA
Ga0210259_1094272933300030625SoilMMTAEVPDALANDPLSPVLPSQLDTIVPSGRVFTGKIFPTDKVALAPAYTN
Ga0210259_1109634813300030625SoilMMMVDVPDALANEPLSPVFPSQLETIVPSGKVFTGKIFPTDKVALEPA
Ga0210268_120284523300030629SoilMMIVEVPLALAKEPLSPVLPSQLDTIVPSGSVLTGKILPTERDALLPA
Ga0210250_1135473613300030632SoilMTVEVPEALANAPLSPVLPSQFETIVPSGSVFTGKILPTESEAIKY
Ga0247617_102318923300030684SoilMITVDVPLALAKDPLSPVLPSQFETMVPSGRVLTGKILPTDRDALVPA
Ga0265462_1058539223300030738SoilMITAEVPDALANEPLSPVLASQFETMVPSGSWLTGKILPTEREAFEPA
Ga0265459_1213162223300030741SoilMMMVDVPDALEKEPLSPVLASQLATIVPSGRALTGKILPTESAALEPAYTN
Ga0074021_153920913300030775SoilMMIADVPDALAKEPLSPVFPSQLETIVPSGSVFTGKMLPTDKLAFEPA
Ga0074020_1006876613300030840SoilMIMVEVPEALEKDPLSPVFASQFDTMVPSGNLLTGRILPTLKDALAPA
Ga0074013_1146543813300030907SoilMMTADVPLALVKDPLSPVFPSQLETIVPSGRRLTGKILPTESEALEPA
Ga0138300_109592923300030922SoilMMIADVPEALAKEPLSPVFPSQLETIVPSGRVFTGKMFPTERVAFDPA
Ga0074039_1157407913300030933SoilMIIVEVPEALEKLPLSPVLASQLETMVPSGSWFTGRMLPTARDAF
Ga0074039_1159598023300030933SoilMITAEVPLALANDPLSPVFPSQFETMVPSGRRLTGKILPTESEAFEPAYTN
Ga0074027_1119041823300030980SoilMITAEVPLALAKDPLSPVLPSQFDTIVPSGRRFTGKILPTESEALAPA
Ga0074012_1168040223300031029SoilMMIADVPDALAKEPLSPVFPSQLETIVPSGNVLTGKMFPTDKVALEPA
Ga0170834_11108880923300031057Forest SoilMMIVDVPLALAKEPLSPVLPSQLDTMVPSGSVLTGKILPTERDALLPA
Ga0170823_1663903913300031128Forest SoilMMIAEVPLALAKEPLSPVLPSQFDTIVPSGKVFTGKILPTDRVALEPAYTNYPVYKPST
Ga0170824_11112673923300031231Forest SoilMMTAEVPEALANEPLSPVFASQFDTIVPSGNALTGRILPTESDALDPA
Ga0170824_12179142513300031231Forest SoilMMTAEVPEALAKEPLSPVFPSQLETMVPSGRRFTGKILPTDREALAP
Ga0302140_1035828813300031261BogMMMAEQPEARAKLPLSPVLDSQLDTMVPSGSELTGKILPTESAAIK
Ga0308145_104695213300031378MarineMITADVPEALANEPLSPSLPSQLATMVPSGMALTGRIFPTESE
Ga0170820_1047120513300031446Forest SoilMAEVPLALAKDPLSPVFPSQFETMVPSGIMLTGKIFPTESEA
Ga0170820_1525544023300031446Forest SoilMITAEVPLALAKDPLSPVFASQFETIVPSGRRFTGKIFPTESEALDPA
Ga0170819_1222112113300031469Forest SoilMMMAEVPEALAKEPLSPVLASQLETIVPSGREFTGKILPTERPALEPA
Ga0302126_1019398623300031622MarineAEVPEALAKAPLSPILPSQLETIVPSGMALTGRILPTEREAI
Ga0302135_1032542523300031625MarineMTIAEVPPALAKAPLSPIFYSTLQMVVPSGILLTGRTLPVLT
Ga0307393_109057123300031674MarineMTAEVPEALANEPLSPSLASQLETMVPSGMLLTGRIFPTESEALVP
Ga0307386_1055469223300031710MarineMTAEVPEALANDPLSPSFPSQLETIVPSGMAFTGRIFPT
Ga0307381_1023559013300031725MarineMITAEVPEALAKAPLSPSLPSQFETIVPSGIWFTGRIFPTESEALVPA
Ga0307395_1034664613300031742MarineMITAEVPEALANEPLSPLFPSQLVTIVPSGMQLTGRIFPIERDAFDPA
Ga0315742_1101961923300032756Forest SoilMMMVEVPDALEKEPLSPVLASQLETMVPSGSALTGKILPTESAALEPAYTN
Ga0315742_1108123623300032756Forest SoilMIIVDVPEALEKDPLSPVFASQFDTMVPSGNLLTGRILPTLKDALEPA
Ga0315742_1118306823300032756Forest SoilMITAEVPEALAKDPLSPVLPSQFETIVPSGKVFTGKIFPTDKVALAPAYTN
Ga0315742_1133927113300032756Forest SoilMMMVDVPLALAKEPLSPVFPSQLDTIVPSGSVLTGKILPTERDALLPA
Ga0334983_0512462_413_5653300034060FreshwaterMMTAEHPEALARVPLSPTLPSQLLTIVPSGMELTGRMFPTEREAAIIKYN
Ga0335025_0430629_36_1883300034096FreshwaterMIMVAVPEALAKEPLSPVLASQLETMVPSGRALTGRMFPTLRAANGIHKR
Ga0326783_052285_177_3233300034362SoilMMTAEVPEALANDPLSPVFPSQLETIVPSGNKFTGKIFPTEREAFEPA


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