Metagenome / Metatranscriptome Family F058229

Overview

Basic Information

• Family ID: F058229
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 135
• Average Sequence Length: 61 residues
• Representative Sequence: MNPPPPYDDLDDPSDEFQGDTHAADIVGPTGEEMPIATHAEVHRTPELRGLEARSPRGDRRD
• Number of Associated Samples: 98
• Number of Associated Scaffolds: 135

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 27.41 %
• % of genes near scaffold ends (potentially truncated): 21.48 %
• % of genes from short scaffolds (< 2000 bps): 82.22 %
• Associated GOLD sequencing projects: 86
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (84.444 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.778 % of family members)
• Environment Ontology (ENVO): Unclassified (57.778 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (69.630 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 3.33%
  β-sheet: 0.00%
  Coil/Unstructured: 96.67%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF10604	Polyketide_cyc2	43.70
PF00753	Lactamase_B	3.70
PF01434	Peptidase_M41	2.22
PF03551	PadR	2.22
PF06480	FtsH_ext	2.22
PF08837	DUF1810	1.48
PF00072	Response_reg	0.74
PF00004	AAA	0.74
PF01063	Aminotran_4	0.74
PF00158	Sigma54_activat	0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	4.44
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.22
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.22
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.22
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.48
COG5579	Uncharacterized conserved protein, DUF1810 family	Function unknown [S]	1.48
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.74
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.74
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.74
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.74

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.44 %
Unclassified	root	N/A	15.56 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.44 %
Unclassified	root	N/A	15.56 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.44 %
Unclassified	root	N/A	15.56 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.15 %
Unclassified	root	N/A	15.56 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.22 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.48 %
Unclassified	root	N/A	15.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.37 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	3.70 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
Unclassified	root	N/A	15.56 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	3.70 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
Unclassified	root	N/A	15.56 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	3.70 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	3.70 %
Unclassified	root	N/A	15.56 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3.70 %
Unclassified	root	N/A	15.56 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000956|JGI10216J12902_101140431	All Organisms → cellular organisms → Bacteria	4706
3300000956|JGI10216J12902_102336730	All Organisms → cellular organisms → Bacteria	1330
3300000956|JGI10216J12902_115250447	All Organisms → cellular organisms → Bacteria	957
3300004114|Ga0062593_102258441	All Organisms → cellular organisms → Bacteria	611
3300004463|Ga0063356_101685435	All Organisms → cellular organisms → Bacteria → Proteobacteria	947
3300005093|Ga0062594_100483668	All Organisms → cellular organisms → Bacteria	1039
3300005093|Ga0062594_101811905	Not Available	643
3300005328|Ga0070676_11202699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576
3300005331|Ga0070670_100002206	All Organisms → cellular organisms → Bacteria	16007
3300005333|Ga0070677_10341902	All Organisms → cellular organisms → Bacteria	773

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	41.48%
Host-Associated	Host-Associated	58.52%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.96%
Plants	Host-Associated → Plants	58.52%
Terrestrial	Environmental → Terrestrial	38.52%

Category

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	2.22%
Freshwater	Environmental → Aquatic → Freshwater	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.78%
Roots	Host-Associated → Plants → Roots	0.74%
Sediment	Environmental → Aquatic → Sediment	2.22%
Soil	Environmental → Terrestrial → Soil	35.56%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.52%
Loam	Environmental → Terrestrial → Soil → Loam	2.22%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.22%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	23.70%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.22%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.74%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	23.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.22%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.74%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.22%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	11.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.22%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1011404312	3300000956	Soil	MNPHPPYDLPGDPDDEFQGDVHAADIVSPTGEEMPMATHAEVHRSPEARVLDARSHRDDHRG*
JGI10216J12902_1023367302	3300000956	Soil	MNPPPHDTPFDPERDDPADEFQGDTQAADIVGPTGEEMPIATHAEVHRVPELRALDAPSHRSDRRG*
JGI10216J12902_1152504472	3300000956	Soil	MNPPPPFEILDGPDDEFQGDTHAPDIVGPTGEEMPMATHAETHSEPETRALAARPSGPERRG*
Ga0062593_1022584412	3300004114	Soil	MPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSQPEVRALAARPSGPERRS*
Ga0063356_1016854352	3300004463	Arabidopsis Thaliana Rhizosphere	MNPPPFDIPDDPADEFQGDMHAADIVGPTGEEMPIATHAEVHRTPEPRAYEARSHRGDHRS*
Ga0062594_1004836681	3300005093	Soil	MNPPPPYEIHDDPDDEFQGDTHAPDIVGPTGEEMPMATHAEVHTLPELRPLAARPSGPERRGY*
Ga0062594_1018119052	3300005093	Soil	MVPRPMSPAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0070676_112026991	3300005328	Miscanthus Rhizosphere	MVSRPMNPAPPSDDLDEPADEFQGDVHAADIVSPTGEEMPIATHAEVHRIPELRSSGARSPQGDHQD*
Ga0070670_1000022067	3300005331	Switchgrass Rhizosphere	MNPPHPYDDADDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRTPELRGLETRSSREGRRD*
Ga0070677_103419021	3300005333	Miscanthus Rhizosphere	MTHPPPFKGPDDPADEFQGDVHAADIVSPTGEEMPIATHAEVHRTPELRGLEVRSSRGDRRD*
Ga0070677_106824332	3300005333	Miscanthus Rhizosphere	MNPPPPYDTPDDPTDEFQGDMHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0068869_1000018182	3300005334	Miscanthus Rhizosphere	MVPRPMSTAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0068869_1000950641	3300005334	Miscanthus Rhizosphere	MNPSPDDNSDDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRPPEGPVLEGRPHRRDSRN*
Ga0068869_1003783201	3300005334	Miscanthus Rhizosphere	MVSRPMNPAPPSDDLDEPADEFQGDVHAADIVSPTGEEMPIATHAEVHRIPELRSPGARSPQGDHQD*
Ga0070668_1005254571	3300005347	Switchgrass Rhizosphere	IPRPMSTAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPEVRGLEGPSSRGDRRD*
Ga0070669_1002486541	3300005353	Switchgrass Rhizosphere	MTLPPRYDYPDDPSDEFQGDMHAADIVSPTGEEMPIATHAEVHRLPEPRALEARAHRGGSGH*
Ga0070674_1019534422	3300005356	Miscanthus Rhizosphere	MNPPPPFEIPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSLPDVRALAARPSGPERRS*
Ga0070673_1001691362	3300005364	Switchgrass Rhizosphere	MNPPPDDNSDDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRPPEGPVLEGRPHRRDSRN*
Ga0070673_1022156521	3300005364	Switchgrass Rhizosphere	MNPPPPFETPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSAPDVPALAGRPSGPERRS*
Ga0070688_1012805861	3300005365	Switchgrass Rhizosphere	MNPPPPYDDPDDPADEFQGDVHAADIVSPTGEEMPIATHAEVHRIPELRSSGARSPQGDHQD*
Ga0070701_104463403	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	PGTAIECSKAMNPPPDDNSDDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRPPEGPVLEGRPHRRDSRN*
Ga0070678_1003042142	3300005456	Miscanthus Rhizosphere	MVPSPMTLLPPFDGPDDPADEFQGDVHAADIVSPTGEEMPIATHAEVHRTPELRGLEVRSSRGDRRD*
Ga0070672_1005888622	3300005543	Miscanthus Rhizosphere	MNLPPAHDEPNDPADEFQGDAHAADIVSPTGEEMPIATHAEVHRTPELRGLAARASRGGRLD*
Ga0070672_1013800501	3300005543	Miscanthus Rhizosphere	MNPPPPFEMPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSAPDVHALAGRPSGPERRS*
Ga0068859_1006050842	3300005617	Switchgrass Rhizosphere	MSTAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLETRASRGDRRD*
Ga0068870_101149992	3300005840	Miscanthus Rhizosphere	MSTAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0068870_107882222	3300005840	Miscanthus Rhizosphere	MNPAPPSDDLDEPADEFQGDVHAADIVSPTGEEMPIATHAEVHRIPELRSPGARSPQGDHQD*
Ga0068870_111933561	3300005840	Miscanthus Rhizosphere	PMTVPPPYETPGDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRPPDPRAVEPRTQRVWLPFTSSRRLT*
Ga0068863_1002816062	3300005841	Switchgrass Rhizosphere	MNPAPPSDDLDEPADEFQGDVHAADIVSPTGEEMPIATHAEVHRIPELRSSGARSPQGDHQD*
Ga0068863_1007577031	3300005841	Switchgrass Rhizosphere	MNPPHPYDDADDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRTLELRGLETRSSREGRRD*
Ga0068858_1000096498	3300005842	Switchgrass Rhizosphere	MHLPPAFDAFDDPDDEFQGDVHAADIVSPTGEEMPMSTHAEVHRQPEPRVLESRPNRTES
Ga0068858_1003282121	3300005842	Switchgrass Rhizosphere	LDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0068860_1010533611	3300005843	Switchgrass Rhizosphere	PPYGIDDPEDEFQGDVHAADIVGRTGEEMPIATHAEVHRTPEPRALEAPSHRATGRD*
Ga0066652_1002028652	3300006046	Soil	MNPHPPHDDADDPADEFQGDMHAADIVGPTGEEMPMATHAEVHRTPELRGLEARSSRGDRRD*
Ga0097621_1011958612	3300006237	Miscanthus Rhizosphere	MNPPPPYDDLDDPSDEFQGDTHAADIVGPTGEEMPIATHAEVHRTPELRGLEARSPRGDRRD*
Ga0079222_116882401	3300006755	Agricultural Soil	PAFDAFDDPDDEFQGDVHAADIVSPTGEEMPMSTHAEVHRQPEPRVLESRPNRTEP*
Ga0075428_1005480552	3300006844	Populus Rhizosphere	MHPPPPYDIPDDPADEFQGDMHAADIVGPTGEEMPIATHAEVHRTPEPRAYEARSHRGDHRS*
Ga0079215_103013491	3300006894	Agricultural Soil	MNPPPHDTPFDPERDDPADEFQGDTQAADIVGPTGEEMPIATHAEVHRVPELRALAAPSHRSDRRG*
Ga0079216_109481872	3300006918	Agricultural Soil	MNPPPPYDTPDDPADEFQGDVHAADIVGPTGEEMPIATHAEVHRMPELRVLGARSHRGDSQD*
Ga0097620_1006050422	3300006931	Switchgrass Rhizosphere	MVPRPMSTAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLETRASRGDRRD*
Ga0075435_1014286942	3300007076	Populus Rhizosphere	MTLPPRYDYPDDPSDEFQGDMHAADIVSPTGEEMPIATHAEVHRLPEPRALEARAHRGGSGY*
Ga0105245_122885711	3300009098	Miscanthus Rhizosphere	MSPAPPYDDLDDPADEFQGDVHAADIVSPTGEEMPMATHAEVHRTPEVRGLEAPSRRGDHRD*
Ga0075418_131744892	3300009100	Populus Rhizosphere	MHPPPPYDIPDDPADEFQGDMHAADIVGPTGEEMPIATHAEVHRTPEPRAYDARSRRGDHRG*
Ga0114129_127742671	3300009147	Populus Rhizosphere	MNLPPRYDHPDDPSDEFQGDMHAADIVSPTGEEMPIATHAEVHRLPEPRALEARAHRGGSGH*
Ga0105241_111873112	3300009174	Corn Rhizosphere	MSPAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0105248_104216332	3300009177	Switchgrass Rhizosphere	MSPAPPYDDLDDPSDEFQGDVHAADLVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0105238_117970352	3300009551	Corn Rhizosphere	MNPAPPSDDLDEPADEFQADVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0105340_10280582	3300009610	Soil	MNPPPPYDAADDPDDEFQGDVHAADIVGPTGEEMPMATHAEVHRTPEPPVLEARSNRGDRRD*
Ga0105252_102356862	3300009678	Soil	MNPPPPYDTPDDPADEFQGDVQAADIVGPTGEEMPIATHAEVHRMPELRALGARSHRGDPQD*
Ga0134127_101555313	3300010399	Terrestrial Soil	MNLPPAHDEPNDPADEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0134127_107312182	3300010399	Terrestrial Soil	MNPPPPHDISDDPSDEFQGDVHAADIVSPTGEEMPIATHAEVHRTPELRGLEARSSRGDRRD*
Ga0134121_116262431	3300010401	Terrestrial Soil	MSTAPPYDDLDDPSDEFQGDVHAADLVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0105246_117003272	3300011119	Miscanthus Rhizosphere	MNPPPYGIDDPEDEFQGDVHAADIVGRTGEEMPIATRAEVHRTPEPRALEAPSHRATGRD
Ga0157305_100727852	3300012891	Soil	DDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSQPEVRALAARPSGPERRS*
Ga0157293_100210882	3300012898	Soil	MNPPPPFEMPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSQPEVRALAARPSGPERRS*
Ga0157292_101953612	3300012900	Soil	MNPPPPYEIHDDPADEFQGDTHAPDIVGPTGEEMPMATHAEVHTLPELRPLAARPSGPERRGY*
Ga0157289_100004886	3300012903	Soil	MPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEAHSQPEVRALAARPSGPERRS*
Ga0157282_102223842	3300012904	Soil	MNPPPPFEMPDDPEAEFQGDTHAPDIVGPTGEEMPRATHAEVHSQPEVRALAARPSGPERRS*
Ga0157290_100918171	3300012909	Soil	DPDDEFQGDTHAPDIVGPTGEEMPMATHAEVHTLPELRPLAARPSGPERRGY*
Ga0157374_115894812	3300013296	Miscanthus Rhizosphere	NPPHPYDDADDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRTPELRGLETR*
Ga0157375_105919192	3300013308	Miscanthus Rhizosphere	MSPSPPYDDPDDPADEFQGDMHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD*
Ga0157380_100327595	3300014326	Switchgrass Rhizosphere	MNPPPPFEMPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSQPEVRALAAR
Ga0157380_112280942	3300014326	Switchgrass Rhizosphere	MTLLPPFDGPDDPADEFQGDVHAADIVSPTGEEMPIATHAEVHRTPELRGLEVRSSRGDRRD*
Ga0157380_112991522	3300014326	Switchgrass Rhizosphere	MNPPPPYDIPDDPADEFQGDMHWADIVGRTGEEMPIATHAEVHRTPEPRVYEARSHRGDHRS*
Ga0157380_115326831	3300014326	Switchgrass Rhizosphere	MNLPPAHDEPNDPADEFQGDAHAADIVSPTGEEMPIATHAEVHRTPELRGLAA
Ga0157380_118288112	3300014326	Switchgrass Rhizosphere	MNPPPPFEMPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSAPDMPALAGRPSGPERRS*
Ga0157376_115443772	3300014969	Miscanthus Rhizosphere	MNPAPPSDDLDEPADEFQGDVHAADIVSPTGEEMPIATHAEVHRIPELRSSGARSPQGDH
Ga0132256_1005164953	3300015372	Arabidopsis Rhizosphere	MSPAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPIATHAEVHRIPELRSPGARSPQGDHQD*
Ga0163161_108808622	3300017792	Switchgrass Rhizosphere	MNPPPPYDDPDDPADEFQGDMHAADIVSPTGEEMPMATHAEVHRTPEVRGLEGPSSRGDRRD
Ga0190266_100095712	3300017965	Soil	MVCWLMNPPPPYDAADDPDDEFQGDVHAADIVGPTGEEMPMATHAEVHRTPEPRVLEAKSSRGDRRG
Ga0190266_103600662	3300017965	Soil	MNPPPPFEILDGPDDEFQGDTHAPDIVGPTGEEMPMATHAEVHTQPEMRALAARPSGPERRG
Ga0190266_112806941	3300017965	Soil	NPPPPFEMPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSQPEVRALAARPSGPERR
Ga0184628_100073086	3300018083	Groundwater Sediment	MNPPPPYEMPNDPADEFQGDTHASDIVGPTGEEMPMATHAEVHTLPEMHALAARPSGPERRG
Ga0190270_107554622	3300018469	Soil	MNPPPPYEIHDDPDDEFQGDTHASDIVGPTGEEMPRATHAEVHTLPELRPLAARPSGPERRG
Ga0190270_108960162	3300018469	Soil	MNPPPPYDTPDDPADEFQGDVQAADIVGPTGEEMPIATHAEVHRMPELRALGARSHRGDSQD
Ga0190270_112032112	3300018469	Soil	MNPPPPFEMPDDPEDEFQGDMHAPDIVGPTGEEMPRATHAEVHSLPEVRALTARPSGPERRS
Ga0190274_100440025	3300018476	Soil	MPDEPEDEFQGDLHASDIVSPTGEEMPRATHAEVHSLPEVHALAARPSGPERRS
Ga0190274_102304662	3300018476	Soil	MNPNPPYDGPDDAADEFQGDVDAADIVSPTGEEMPIATHAEVHRTPELRGLEARASRGDRRD
Ga0190274_105857672	3300018476	Soil	MNPPPPFEILDGPDDEFQGDTHAPDIVGPTGEEMPMATHAETHSEPETRALAARPSGPERRG
Ga0190274_125404152	3300018476	Soil	MNPPPPFEMPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSLPEVRALAARPSGPERRS
Ga0190271_100340522	3300018481	Soil	MPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSLPEVRALVARPSGPERRS
Ga0190271_132693341	3300018481	Soil	MNPPPPYEIHDEPDDEFQGDTHAPDIVGPTGEEMPMATHAEVHTLPEQRPLAARPSGPERRG
Ga0173481_102976032	3300019356	Soil	MNPPPPFEMPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSQPEVRALAARPSGPERRS
Ga0210380_101923061	3300021082	Groundwater Sediment	MNPPPPYEIHDDPADEFQGDTHAPDIVGPTGEEMPMATHAEVHTLPELRPLAARPSGPERRGY
Ga0247766_11790462	3300022906	Plant Litter	LRLMNPPPPFEMPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSQPEVRALAARPSGPERRS
Ga0207642_100238143	3300025899	Miscanthus Rhizosphere	MVPRPMSTAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD
Ga0207688_109952062	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MVPRPMTPPPPYDDADDPADEFQGDVHAADLVSPTGEEMPVATHAEVHRTPELRGLEARSPRGDHRD
Ga0207680_105638781	3300025903	Switchgrass Rhizosphere	MVPRPMSTAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPEVRGLEGRSSRGDRRD
Ga0207645_100242263	3300025907	Miscanthus Rhizosphere	MVPRPMSPAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD
Ga0207645_107528012	3300025907	Miscanthus Rhizosphere	MNPAPPSDDLDEPADEFQGDVHAADIVSPTGEEMPIATHAEVHRIPELRSSGARSPQGDHQD
Ga0207643_100033297	3300025908	Miscanthus Rhizosphere	MNPPPDDNSDDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRPPEGPVLEGRPHRRDSR
Ga0207643_100357635	3300025908	Miscanthus Rhizosphere	MNPPPPYEIHDDPDDEFQGDTHAPDIVGPTGEEMPMATHAEVHTLPELRPLAARPSGPERRGY
Ga0207649_102214902	3300025920	Corn Rhizosphere	MNPPHPYDDADDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRTPELRGLETRSSREGRRD
Ga0207681_100422262	3300025923	Switchgrass Rhizosphere	MNPSPDDNSDDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRPPEGPVLEGRPHRRDSR
Ga0207681_100542653	3300025923	Switchgrass Rhizosphere	MTLPPRYDYPDDPSDEFQGDMHAADIVSPTGEEMPIATHAEVHRLPEPRALEARAHRGGSGH
Ga0207681_102464791	3300025923	Switchgrass Rhizosphere	YEIHDDPADEFQGDTHAPDIVGPTGEEMPMATHAEVHTLPELRPLAARPSGPERRGY
Ga0207681_110679511	3300025923	Switchgrass Rhizosphere	EMADDPADEFQGDTDAPDIVGPTGEEMPMATHAEVHTLPDRHALAARPSGPERRG
Ga0207650_108408421	3300025925	Switchgrass Rhizosphere	MTVPPPYETPGDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRPPDPRGLEARTGRVW
Ga0207659_100772052	3300025926	Miscanthus Rhizosphere	MNPAPPSDDLDEPADEFQGDVHAADIVSPTGEEMPIATHAEVHRIPELRSPGARSPQGDHQD
Ga0207659_117730172	3300025926	Miscanthus Rhizosphere	ADDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRTPELRGLETRSSREGRRD
Ga0207644_100235042	3300025931	Switchgrass Rhizosphere	MVSRPMNPAPPSDDLDEPADEFQGDVHAADIVSPTGEEMPIATHAEVHRIPELRSPGARSPQGDHQD
Ga0207669_105611192	3300025937	Miscanthus Rhizosphere	MTHPPPFKGPDDPADEFQGDVHAADIVSPTGEEMPIATHAEVHRTPELRGLEVRSSRGDRRD
Ga0207669_113445542	3300025937	Miscanthus Rhizosphere	MNPPPPFEIPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSLPDVRALAARPSGPERRS
Ga0207691_104593852	3300025940	Miscanthus Rhizosphere	MKPPYEMADDPADEFQGDTDAPDIVGPTGEEMPMATHAEVHTLPERHALAARPSGPERRG
Ga0207691_105332822	3300025940	Miscanthus Rhizosphere	MNLPPAHDEPNDPADEFQGDAHAADIVSPTGEEMPIATHAEVHRTPELRGLAARASRGGRLD
Ga0207691_106303861	3300025940	Miscanthus Rhizosphere	MSPSPPYDDPDDPADEFQGDMHAADIVSPTGEEMPMATHAEVHRTPEVRGLEGPSSRGDRRD
Ga0207711_105387272	3300025941	Switchgrass Rhizosphere	MHLPPAFDAFDDPDDEFQGDVHAADIVSPTGEEMPMSTHAEVHRQPEPRVLESRPNRTEP
Ga0207711_107985981	3300025941	Switchgrass Rhizosphere	MKPPYEMADDPADEFQGDTDAPDIVGPTGEEMPMATHAEVHTLPERHALAARP
Ga0207679_100298174	3300025945	Corn Rhizosphere	AWRLNTRRPMNPPHPYDDADDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRTPELRGLETRSSREGRRD
Ga0207651_118504612	3300025960	Switchgrass Rhizosphere	FEMPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSAPDVPALAGRPSGPERRS
Ga0207668_102441201	3300025972	Switchgrass Rhizosphere	PYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPEVRGLEGPSSRGDRRD
Ga0207703_102384371	3300026035	Switchgrass Rhizosphere	TAPPYDDLDDPSDEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD
Ga0207708_108629472	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MNPPPDDNSDDPADEFQGDTHAADIVGPTGEEMPIATHAEVHRTPEPRAYEARSHRGDHR
Ga0207648_106759622	3300026089	Miscanthus Rhizosphere	MAPPVPYDTPDDPADEFQGDVHAADIVGPTGEEMPIATHAEVHRTPEPRALEARAHRGGSAD
Ga0207675_1001269512	3300026118	Switchgrass Rhizosphere	MVPRPMSTAPPYDDLDDPSDEFQGDVHAADLVSPTGEEMPMATHAEVHRTPELRGLEARSPRGDHRD
Ga0207675_1013687451	3300026118	Switchgrass Rhizosphere	DDPDDPADEFQGDMHAADIVSPTGEEMPMATHAEVHRTPEVRGLVGPSSRGDRRD
Ga0207683_107104732	3300026121	Miscanthus Rhizosphere	MTLLPPFDGPDDPADEFQGDVHAADIVSPTGEEMPIATHAEVHRTPELRGLEVRSSRGDRRD
Ga0268265_109712802	3300028380	Switchgrass Rhizosphere	MNPSPDDNSDDPADEFQGDTHAADIVGPTGEEMPIATHAQVHRPPEGPVLEGRPHRRDSR
Ga0268265_113536971	3300028380	Switchgrass Rhizosphere	MNPPPPYDSPDDPADEFQGDMHAADIVGPTGEEMPIATHAEVHRTPELRVLEARSHRGGSRD
Ga0307322_101011122	3300028710	Soil	MPDEPEDEFQGDLHASDIVSPTGEEMPRATHAEVHSLPEGHALAARPSGPERRS
Ga0307503_102560732	3300028802	Soil	MNPPPPFNDPDDPADEFQGDVHAADIVSPTGEEMPMATHAEVHRTPELRGLEARSSRGDRRD
Ga0247825_111723291	3300028812	Soil	MPDDPEDEFQGDTHAPDIVGPTGEEMPRATHAEVHSQPEVRALAARPSGPERRS
Ga0308204_102261682	3300031092	Soil	DTSDDPGDEFQGDTDAADIVGPTGEEMPIATHAEVHRPPDAGASEARPHRGDSRN
Ga0310888_100969141	3300031538	Soil	MNPPPPYEIHDDPADEFQGDTHAPDIVGPTGEEMPMATHAEVHTLPELRPLAARP
Ga0310887_104226462	3300031547	Soil	MHPAPPYDTPDDPADEFQGDTQAADIVGPTGEEMPVATHAEVHRTPEPRAYEARPHRGDHRR
Ga0310907_104798311	3300031847	Soil	MIPPPPHDTPDDPADEFQGDTHAADIVGPTGEEMPVATHAEVHRTPEPRAYQARSQR
Ga0310892_103097962	3300031858	Soil	MIPPPPHDTPDDPADEFQGDTHAADIVGPTGEEMPVATHAEVHRTPEPRAYQARSQRGDQRS
Ga0310890_114847052	3300032075	Soil	PMNPPPPYEIHDDPADEFQGDTHAPDIVGPTGEEMPMATHAEVHTLPELRPLAARPSGPERRGY
Ga0310895_101148152	3300032122	Soil	MNPPPPDDTPDDPADEFQGDTHAADIVGPTGEEMPVATHAEVHRTPEPRAYQARSQRGDQRS
Ga0315910_113388282	3300032144	Soil	MNPPPPYDIPDDPADEFQGDMHWADIVGRTGEEMPIATHAEVHRTPEPRVYEARPHRGDHRS
Ga0315912_100129166	3300032157	Soil	MNPPPPYDIPDDPADEFQGDMHWADIVGRTGEEMPIATHAEVHRTPEPRVYEARSHRGDHRS
Ga0310896_109003422	3300032211	Soil	MNPPSPYDIPDDPSDEFQGDVHAADIVSPTGEEMPIATHAEVRRTPEPRACDARSHRGDHRS
Ga0364927_0016897_259_447	3300034148	Sediment	MNPPPPYEAADDPDDEFQGDVHAADIVGPTGEEMPMATHAEVHRTPEPPVLEARSNRGDRRD
Ga0364929_0091908_1_162	3300034149	Sediment	MNPPPPNDAADDPDDEFQGDVHAADIVGPTGEEMPMATHAEVHRTPEPRVLEAK
Ga0364941_204684_103_267	3300034417	Sediment	MPNDPADEFQGDTHASDIVGPTGEEMPMATHAEVHTLPEMHALAARPSGPERRG