Metagenome / Metatranscriptome Family F057946

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F057946
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	44 residues
Representative Sequence	MLRRTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINI
Number of Associated Samples	73
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.15 %
% of genes near scaffold ends (potentially truncated)	87.41 %
% of genes from short scaffolds (< 2000 bps)	69.63 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (70.370 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (30.370 % of family members)
Environment Ontology (ENVO)	Unclassified (84.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (96.296 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.60% β-sheet: 4.65% Coil/Unstructured: 76.74%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF04255	DUF433	8.89
PF01177	Asp_Glu_race	5.19
PF10509	GalKase_gal_bdg	3.70
PF07642	BBP2	2.96
PF05336	rhaM	2.96
PF04505	CD225	2.96
PF08544	GHMP_kinases_C	2.22
PF01070	FMN_dh	2.22
PF13377	Peripla_BP_3	1.48
PF06134	RhaA	1.48
PF00155	Aminotran_1_2	1.48
PF09835	DUF2062	1.48
PF01791	DeoC	0.74
PF02577	BFN_dom	0.74
PF07963	N_methyl	0.74
PF16403	DUF5011	0.74
PF02569	Pantoate_ligase	0.74
PF00691	OmpA	0.74
PF02784	Orn_Arg_deC_N	0.74
PF14315	DUF4380	0.74
PF05656	DUF805	0.74
PF00830	Ribosomal_L28	0.74
PF09976	TPR_21	0.74
PF13768	VWA_3	0.74
PF13020	NOV_C	0.74
PF00092	VWA	0.74
PF03320	FBPase_glpX	0.74
PF02952	Fucose_iso_C	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	8.89
COG3254	L-rhamnose mutarotase	Cell wall/membrane/envelope biogenesis [M]	2.96
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	2.22
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	2.22
COG4806	L-rhamnose isomerase	Carbohydrate transport and metabolism [G]	1.48
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	0.74
COG0227	Ribosomal protein L28	Translation, ribosomal structure and biogenesis [J]	0.74
COG0414	Panthothenate synthetase	Coenzyme transport and metabolism [H]	0.74
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	0.74
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.74
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	0.74
COG2407	L-fucose isomerase or related protein	Carbohydrate transport and metabolism [G]	0.74
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	45.93 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	44.44 %
Unclassified	root	N/A	29.63 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	33.33 %
Unclassified	root	N/A	29.63 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	1.48 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.74 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	33.33 %
Unclassified	root	N/A	29.63 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.48 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.74 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Verrucomicrobia subdivision 6	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	26.67 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.48 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.48 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.74 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Verrucomicrobia subdivision 6 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6 → Verrucomicrobia subdivision 6 bacterium	1.48 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.48 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.48 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.74 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000736\|JGI12547J11936_1032195	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300000736\|JGI12547J11936_1045070	Not Available	916	Open in IMG/M
3300000736\|JGI12547J11936_1045806	Not Available	906	Open in IMG/M
3300000736\|JGI12547J11936_1050977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	840	Open in IMG/M
3300002835\|B570J40625_100208178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2106	Open in IMG/M
3300003395\|JGI25917J50250_1002674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4911	Open in IMG/M
3300003490\|JGI25926J51410_1017890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	1409	Open in IMG/M
3300003491\|JGI25924J51412_1007563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	2079	Open in IMG/M
3300005517\|Ga0070374_10062448	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300005517\|Ga0070374_10678337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	509	Open in IMG/M
3300006862\|Ga0079299_1009646	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300007162\|Ga0079300_10022078	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300008055\|Ga0108970_11180153	Not Available	809	Open in IMG/M
3300008108\|Ga0114341_10004070	All Organisms → cellular organisms → Bacteria	19405	Open in IMG/M
3300008117\|Ga0114351_1349825	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	664	Open in IMG/M
3300009068\|Ga0114973_10113457	Not Available	1530	Open in IMG/M
3300009068\|Ga0114973_10226498	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300009151\|Ga0114962_10009283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7333	Open in IMG/M
3300009154\|Ga0114963_10641000	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009155\|Ga0114968_10011553	All Organisms → cellular organisms → Bacteria	6322	Open in IMG/M
3300009155\|Ga0114968_10038145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	3167	Open in IMG/M
3300009155\|Ga0114968_10464413	Not Available	683	Open in IMG/M
3300009158\|Ga0114977_10011518	All Organisms → cellular organisms → Bacteria	5607	Open in IMG/M
3300009161\|Ga0114966_10312569	Not Available	946	Open in IMG/M
3300009161\|Ga0114966_10312854	Not Available	946	Open in IMG/M
3300009180\|Ga0114979_10219388	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1147	Open in IMG/M
3300009180\|Ga0114979_10833028	Not Available	516	Open in IMG/M
3300009184\|Ga0114976_10156398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	1274	Open in IMG/M
3300009184\|Ga0114976_10184349	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1156	Open in IMG/M
3300009185\|Ga0114971_10061915	All Organisms → cellular organisms → Bacteria	2332	Open in IMG/M
3300009185\|Ga0114971_10339460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	862	Open in IMG/M
3300009185\|Ga0114971_10388719	Not Available	793	Open in IMG/M
3300009185\|Ga0114971_10783796	Not Available	517	Open in IMG/M
3300009187\|Ga0114972_10408413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	781	Open in IMG/M
3300009187\|Ga0114972_10441943	Not Available	744	Open in IMG/M
3300010157\|Ga0114964_10334197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	717	Open in IMG/M
3300010160\|Ga0114967_10237584	Not Available	961	Open in IMG/M
3300010160\|Ga0114967_10244698	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300010160\|Ga0114967_10498278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	595	Open in IMG/M
3300010334\|Ga0136644_10279534	Not Available	972	Open in IMG/M
3300010334\|Ga0136644_10707534	Not Available	547	Open in IMG/M
3300010885\|Ga0133913_11989597	Not Available	1444	Open in IMG/M
3300010885\|Ga0133913_12286533	Not Available	1328	Open in IMG/M
3300010885\|Ga0133913_12894499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1151	Open in IMG/M
3300010885\|Ga0133913_13148368	Not Available	1093	Open in IMG/M
3300010885\|Ga0133913_13368867	Not Available	1048	Open in IMG/M
3300011115\|Ga0151514_10753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	13519	Open in IMG/M
3300012000\|Ga0119951_1026481	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300013006\|Ga0164294_10110384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	2028	Open in IMG/M
3300013006\|Ga0164294_10119638	Not Available	1933	Open in IMG/M
3300013006\|Ga0164294_10390894	Not Available	954	Open in IMG/M
3300013006\|Ga0164294_10605920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	742	Open in IMG/M
3300013006\|Ga0164294_10606812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	742	Open in IMG/M
3300013006\|Ga0164294_10631040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6 → Verrucomicrobia subdivision 6 bacterium	725	Open in IMG/M
3300013006\|Ga0164294_10678565	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	696	Open in IMG/M
3300013006\|Ga0164294_10814306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	629	Open in IMG/M
3300013006\|Ga0164294_11143482	Not Available	522	Open in IMG/M
3300013014\|Ga0164295_10039575	Not Available	3566	Open in IMG/M
3300013014\|Ga0164295_10109891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	2046	Open in IMG/M
3300013014\|Ga0164295_10773599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	742	Open in IMG/M
3300013014\|Ga0164295_11134796	Not Available	607	Open in IMG/M
3300014050\|Ga0119952_1000613	All Organisms → cellular organisms → Bacteria	22983	Open in IMG/M
3300018790\|Ga0187842_1022584	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300018790\|Ga0187842_1090960	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300018790\|Ga0187842_1116541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	804	Open in IMG/M
3300018790\|Ga0187842_1226586	Not Available	543	Open in IMG/M
3300018868\|Ga0187844_10061547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1752	Open in IMG/M
3300018868\|Ga0187844_10106313	Not Available	1262	Open in IMG/M
3300018868\|Ga0187844_10175532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	930	Open in IMG/M
3300019093\|Ga0187843_10079003	Not Available	1512	Open in IMG/M
3300019093\|Ga0187843_10330425	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300020084\|Ga0194110_10435300	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300020161\|Ga0211726_10518043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	561	Open in IMG/M
3300020179\|Ga0194134_10038456	All Organisms → cellular organisms → Bacteria	2792	Open in IMG/M
3300020183\|Ga0194115_10027923	All Organisms → cellular organisms → Bacteria	4095	Open in IMG/M
3300020190\|Ga0194118_10016553	All Organisms → cellular organisms → Bacteria	5868	Open in IMG/M
3300020196\|Ga0194124_10201659	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300020578\|Ga0194129_10074874	All Organisms → cellular organisms → Bacteria	2414	Open in IMG/M
3300021424\|Ga0194117_10179272	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300021519\|Ga0194048_10090939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	1183	Open in IMG/M
3300022748\|Ga0228702_1089742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	740	Open in IMG/M
3300022752\|Ga0214917_10002121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	24679	Open in IMG/M
3300022752\|Ga0214917_10018425	All Organisms → cellular organisms → Bacteria	5864	Open in IMG/M
3300022752\|Ga0214917_10141190	Not Available	1294	Open in IMG/M
3300023174\|Ga0214921_10017362	All Organisms → cellular organisms → Bacteria	7994	Open in IMG/M
3300023174\|Ga0214921_10033812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4921	Open in IMG/M
3300023174\|Ga0214921_10098674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	2205	Open in IMG/M
3300023174\|Ga0214921_10260138	Not Available	1007	Open in IMG/M
3300023174\|Ga0214921_10359842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	768	Open in IMG/M
3300023174\|Ga0214921_10464607	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	617	Open in IMG/M
3300023179\|Ga0214923_10000166	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	101047	Open in IMG/M
3300023179\|Ga0214923_10104982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	1892	Open in IMG/M
3300023179\|Ga0214923_10157736	Not Available	1406	Open in IMG/M
3300023179\|Ga0214923_10178376	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300023184\|Ga0214919_10007239	All Organisms → cellular organisms → Bacteria	15018	Open in IMG/M
3300023184\|Ga0214919_10051874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	3912	Open in IMG/M
3300023184\|Ga0214919_10353572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	978	Open in IMG/M
3300024861\|Ga0256312_1034868	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300027563\|Ga0209552_1006760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	3639	Open in IMG/M
3300027581\|Ga0209651_1010926	All Organisms → cellular organisms → Bacteria	2966	Open in IMG/M
3300027581\|Ga0209651_1067314	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300027586\|Ga0208966_1144248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	633	Open in IMG/M
3300027621\|Ga0208951_1036581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	1478	Open in IMG/M
3300027621\|Ga0208951_1075340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	948	Open in IMG/M
3300027642\|Ga0209135_1043964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	1581	Open in IMG/M
3300027642\|Ga0209135_1129782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	825	Open in IMG/M
3300027642\|Ga0209135_1165097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6 → Verrucomicrobia subdivision 6 bacterium	703	Open in IMG/M
3300027644\|Ga0209356_1017256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	2470	Open in IMG/M
3300027644\|Ga0209356_1047778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1346	Open in IMG/M
3300027644\|Ga0209356_1211171	Not Available	520	Open in IMG/M
3300027656\|Ga0209357_1014234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2882	Open in IMG/M
3300027697\|Ga0209033_1211254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	576	Open in IMG/M
3300027707\|Ga0209443_1222656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	654	Open in IMG/M
3300027720\|Ga0209617_10054783	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300027720\|Ga0209617_10057868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	1617	Open in IMG/M
3300027720\|Ga0209617_10143431	Not Available	943	Open in IMG/M
3300027720\|Ga0209617_10378178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	519	Open in IMG/M
(restricted) 3300027730\|Ga0247833_1019569	Not Available	5106	Open in IMG/M
3300027733\|Ga0209297_1010428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4550	Open in IMG/M
3300027746\|Ga0209597_1215296	Not Available	778	Open in IMG/M
3300027756\|Ga0209444_10005302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6838	Open in IMG/M
3300027759\|Ga0209296_1145664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	1071	Open in IMG/M
3300027760\|Ga0209598_10089158	Not Available	1476	Open in IMG/M
3300027760\|Ga0209598_10233367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	756	Open in IMG/M
3300027770\|Ga0209086_10056110	Not Available	2183	Open in IMG/M
3300027770\|Ga0209086_10190423	Not Available	953	Open in IMG/M
3300027797\|Ga0209107_10045223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 6	2494	Open in IMG/M
3300027892\|Ga0209550_10045849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3579	Open in IMG/M
3300027963\|Ga0209400_1032768	Not Available	2870	Open in IMG/M
3300027963\|Ga0209400_1242182	Not Available	720	Open in IMG/M
3300028394\|Ga0304730_1199658	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
(restricted) 3300028553\|Ga0247839_1151373	Not Available	1009	Open in IMG/M
(restricted) 3300028557\|Ga0247832_1064324	Not Available	1781	Open in IMG/M
3300031951\|Ga0315904_10080399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3492	Open in IMG/M
3300034272\|Ga0335049_0874166	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.26%
Host-Associated	Host-Associated	0.74%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.78%
Terrestrial	Environmental → Terrestrial	1.48%
Plants	Host-Associated → Plants	0.74%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	97.78%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.48%
Leaf	Host-Associated → Plants → Leaf	0.74%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	71.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	23.70%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.74%
River	Environmental → Aquatic → Freshwater → River	0.74%
Creek	Environmental → Aquatic → Freshwater → Creek	0.74%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	71.85%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	16.30%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.67%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.48%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	30.37%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	24.44%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	14.07%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.63%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	5.93%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.19%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.22%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.48%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.48%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.74%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.74%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.74%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.74%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.74%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.74%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300003491	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300006862	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series LW 2014_7_11	Environmental	Open in IMG/M
3300007162	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011115	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016May	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300018790	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_41	Environmental	Open in IMG/M
3300018868	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50	Environmental	Open in IMG/M
3300019093	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020190	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surface	Environmental	Open in IMG/M
3300020196	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0m	Environmental	Open in IMG/M
3300020578	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m	Environmental	Open in IMG/M
3300021424	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surface	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300022748	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MG	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024861	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027642	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027720	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027730 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8m	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300028553 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_16m	Environmental	Open in IMG/M
3300028557 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_4m	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12547J11936_10321954	3300000736	Freshwater And Sediment	GNRTPDNQAANKLVDAGGIWFEDVGSTPTASINT*
JGI12547J11936_10450701	3300000736	Freshwater And Sediment	DNQAANKLVDAGGIWFEDVGSTPTASILIYMYLH*
JGI12547J11936_10458062	3300000736	Freshwater And Sediment	QGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMLIYRYL*
JGI12547J11936_10509771	3300000736	Freshwater And Sediment	QGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSVR*
B570J40625_1002081781	3300002835	Freshwater	TGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMFPISG*
JGI25917J50250_10026742	3300003395	Freshwater Lake	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFNRTVKMVI*
JGI25926J51410_10178902	3300003490	Freshwater Lake	MLRGTGQWQGNRTPDNQAANKLVDAGGXWFEDVGSTPTASIFNRTVKMVI*
JGI25924J51412_10075634	3300003491	Freshwater Lake	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASXFNRTVKMVI*
Ga0070374_100624483	3300005517	Freshwater Lake	RGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYKAYIKFIA*
Ga0070374_106783371	3300005517	Freshwater Lake	RGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASISSVR*
Ga0079299_10096461	3300006862	Deep Subsurface	MLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMYLH*
Ga0079300_100220783	3300007162	Deep Subsurface	TGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMYLH*
Ga0108970_111801532	3300008055	Estuary	MLRRTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIF*
Ga0114341_1000407015	3300008108	Freshwater, Plankton	MLRRTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINI*
Ga0114351_13498251	3300008117	Freshwater, Plankton	MLRRTGQWQGNRTPDNQAANKLVDAGGIWFEDVGST
Ga0114973_101134571	3300009068	Freshwater Lake	TWMLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMHLH*
Ga0114973_102264981	3300009068	Freshwater Lake	RWQGNRTPDNQPANKLVDAGGSWFEDVGSTPTASINT*
Ga0114962_100092831	3300009151	Freshwater Lake	MLRRAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTAS
Ga0114963_106410002	3300009154	Freshwater Lake	FQESTWMLRRTGQWQGNRPPDNQAANKLVDAGGSWFEDVGSTPTASINAY*
Ga0114968_100115537	3300009155	Freshwater Lake	MLRRTGQWQGNRPPDNQAANKLVDAGGSWFEDVGSTPTASILIYRHLNQYYCLVGI*
Ga0114968_100381454	3300009155	Freshwater Lake	MLRSTGRWQGNRTPDNQPANKLVDAGGSWFEDVGSTPTAS
Ga0114968_104644132	3300009155	Freshwater Lake	MLRSTGQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTASNLLSQD*
Ga0114977_100115181	3300009158	Freshwater Lake	MLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINT*
Ga0114966_103125692	3300009161	Freshwater Lake	STGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMYLH*
Ga0114966_103128542	3300009161	Freshwater Lake	STGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMHLH*
Ga0114979_102193881	3300009180	Freshwater Lake	RTGQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTASIF*
Ga0114979_108330281	3300009180	Freshwater Lake	GNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFPIYG*
Ga0114976_101563981	3300009184	Freshwater Lake	TGQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTASIFNRTVKMVI*
Ga0114976_101843491	3300009184	Freshwater Lake	MLRRTGQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTASIF*
Ga0114971_100619151	3300009185	Freshwater Lake	MLRRAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASINTY*
Ga0114971_103394603	3300009185	Freshwater Lake	TGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSVR*
Ga0114971_103887192	3300009185	Freshwater Lake	LRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMHLH*
Ga0114971_107837961	3300009185	Freshwater Lake	GNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMHLH*
Ga0114972_104084132	3300009187	Freshwater Lake	MLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIIPIFG*
Ga0114972_104419431	3300009187	Freshwater Lake	PDNQAANKLVDAGGIWFEDVGSTPTASMLIYSYLH*
Ga0114964_103341971	3300010157	Freshwater Lake	MLRRAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASILI
Ga0114967_102375842	3300010160	Freshwater Lake	PDNQAANKLVDAGGIWFEDVGSTPTASILIYMHLH*
Ga0114967_102446982	3300010160	Freshwater Lake	TGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYKYLQ*
Ga0114967_104982782	3300010160	Freshwater Lake	RTPDNQAANKLVDAGGIWFEDVGSTPTASIFSVR*
Ga0136644_102795341	3300010334	Freshwater Lake	QGNRTPDNQAANKLVDAGGSWFEDVGSTPTASMLIYSYLH*
Ga0136644_107075341	3300010334	Freshwater Lake	QWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIMIKRCLY*
Ga0133913_119895971	3300010885	Freshwater Lake	RAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASMLIYRCL*
Ga0133913_122865332	3300010885	Freshwater Lake	LRRTGQWQGNRPPDNQAANKLVDAGGSWFEDVGSTPTASILIYRHLNQYYCLVGI*
Ga0133913_128944991	3300010885	Freshwater Lake	RAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASIFF*
Ga0133913_131483682	3300010885	Freshwater Lake	MLRRTGQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTASTS*
Ga0133913_133688672	3300010885	Freshwater Lake	LRGTGQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTASMLIYSYLH*
Ga0151514_1075317	3300011115	Freshwater	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSVR*
Ga0119951_10264811	3300012000	Freshwater	RSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINT*
Ga0164294_101103841	3300013006	Freshwater	GNRTPDNQAANKLVDAGGIWFEDVGSTPTASILISWQ*
Ga0164294_101196381	3300013006	Freshwater	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMLIYRYLH*
Ga0164294_103908941	3300013006	Freshwater	LRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYRYLH*
Ga0164294_106059201	3300013006	Freshwater	MLRRAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASIFS
Ga0164294_106068121	3300013006	Freshwater	GTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINT*
Ga0164294_106310402	3300013006	Freshwater	MLRGTGQWQGNRTPDNQTANKLVDAGGSWFEDVGSTPTASILIYKAYIKFIA*
Ga0164294_106785651	3300013006	Freshwater	QWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSVR*
Ga0164294_108143061	3300013006	Freshwater	STGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMFPIYG*
Ga0164294_111434822	3300013006	Freshwater	PDNQAANKLVDAGGIWFEDVGSTPTASTLIYMHLH*
Ga0164295_100395754	3300013014	Freshwater	TGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYRYLH*
Ga0164295_101098913	3300013014	Freshwater	STGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILISWQ*
Ga0164295_107735991	3300013014	Freshwater	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINT*
Ga0164295_111347962	3300013014	Freshwater	QWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMLIYRYL*
Ga0119952_100061325	3300014050	Freshwater	RTTGRWQGNRGPDNQPANKLVDAGGHRFEDVGSTPTASTLIAGTLK*
Ga0187842_10225841	3300018790	Freshwater	RSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIPSVGFLAP
Ga0187842_10909602	3300018790	Freshwater	MLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINT
Ga0187842_11165412	3300018790	Freshwater	GNRTPDNQAANKLVDAGGIWFEDVGSTPTASILISWQ
Ga0187842_12265862	3300018790	Freshwater	AGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASIFFSGS
Ga0187844_100615473	3300018868	Freshwater	STGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILISWQ
Ga0187844_101063131	3300018868	Freshwater	TGQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTASILIKRCLH
Ga0187844_101755321	3300018868	Freshwater	LRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFFVQD
Ga0187843_100790032	3300019093	Freshwater	GQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTASILIKRCLH
Ga0187843_103304251	3300019093	Freshwater	TGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINT
Ga0194110_104353001	3300020084	Freshwater Lake	LRTTGRWQGNRHPDNQPANKLVDAGGIWFEDVGSTPTASINICQTVN
Ga0211726_105180432	3300020161	Freshwater	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSPIFFSRCPFAR
Ga0194134_100384567	3300020179	Freshwater Lake	RTTGRWQGNRHPDNQPANKLVDAGGIWFEDVGSTPTASMVRPNGCA
Ga0194115_100279231	3300020183	Freshwater Lake	QGNRHPDNQPANKLVDAGGIWFEDVGSTPTASMVRPNGCA
Ga0194118_100165531	3300020190	Freshwater Lake	WWLRTTGRWQGNRHPDNQPANKLVDAGGIWFEDVGSTPTASMVRPNGCA
Ga0194124_102016591	3300020196	Freshwater Lake	QGNRHPDNQPANKLVDAGGIWFEDVGSTPTASINICQTVN
Ga0194129_100748746	3300020578	Freshwater Lake	TGRWQGNRHPDNQPANKLVDAGGIWFEDVGSTPTASMVRPNGCA
Ga0194117_101792721	3300021424	Freshwater Lake	KGNRHPDNQPANKLVDAGGIWFEDVGSTPTASINICQTVN
Ga0194048_100909391	3300021519	Anoxic Zone Freshwater	MLRRAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASILIYRYLH
Ga0228702_10897421	3300022748	Freshwater	MLRRTGQWQGNRSPDNQAANKLVDAGGSWFEDVGSTPTASI
Ga0214917_1000212126	3300022752	Freshwater	MLRRTGQWQGNRPPDNQAANKLVDAGGSWFEDVGSTPTAS
Ga0214917_100184251	3300022752	Freshwater	WMLRRTGQWQGNRPPDNQAANKLVDAGGSWFEDVGSTPTASINT
Ga0214917_101411901	3300022752	Freshwater	PDNQPANKLVDAGGSWFEDVGSTPTASTLIYIYLYQFY
Ga0214921_100173627	3300023174	Freshwater	WMLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMVPIYG
Ga0214921_100338128	3300023174	Freshwater	TWMLRRTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIL
Ga0214921_100986741	3300023174	Freshwater	WMLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINA
Ga0214921_102601381	3300023174	Freshwater	WMLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMHLH
Ga0214921_103598423	3300023174	Freshwater	WMLRGTGQWQGNRTPDNQPANKLVEAGGSWFEDVGSTPTASIFNRTVKMVI
Ga0214921_104646071	3300023174	Freshwater	WMLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSVR
Ga0214923_100001664	3300023179	Freshwater	MLRRTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIINTLCDFYCLVVR
Ga0214923_101049823	3300023179	Freshwater	MLRRTGQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTAS
Ga0214923_101577361	3300023179	Freshwater	WMLRSTGRWQGNRTPDNQPANKLVDAGGSWFEDVGSTPTASTLIYIYLYQFY
Ga0214923_101783761	3300023179	Freshwater	MLRSTGRWQGNRTPDNQPANKLVDAGGSWFEDVGSTPTASINTLYIII
Ga0214919_100072391	3300023184	Freshwater	TWMLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASTLIYRYLHLFCCLVVI
Ga0214919_100518745	3300023184	Freshwater	MLRSTGQWQSNRTSDNQAANKLVDAGGSWFEDVGSTPTASNLLSKESEG
Ga0214919_103535721	3300023184	Freshwater	TWMLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSVR
Ga0256312_10348682	3300024861	Freshwater	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTAS
Ga0209552_10067605	3300027563	Freshwater Lake	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASISSVR
Ga0209651_10109264	3300027581	Freshwater Lake	WMLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYKAYIKFIA
Ga0209651_10673142	3300027581	Freshwater Lake	WMLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMFPISG
Ga0208966_11442481	3300027586	Freshwater Lentic	QGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSVR
Ga0208951_10365811	3300027621	Freshwater Lentic	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSV
Ga0208951_10753401	3300027621	Freshwater Lentic	MLRRAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASIFSHAL
Ga0209135_10439642	3300027642	Freshwater Lake	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYKAYIKFIA
Ga0209135_11297822	3300027642	Freshwater Lake	MLRRAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASIFSHALD
Ga0209135_11650971	3300027642	Freshwater Lake	WQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASISIYRGLH
Ga0209356_10172563	3300027644	Freshwater Lake	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFNRTVKMVI
Ga0209356_10477781	3300027644	Freshwater Lake	MLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMFPIYG
Ga0209356_12111711	3300027644	Freshwater Lake	TPDNQAANKLVDAGGIWFEDVGSTPTASILIYRCLH
Ga0209357_10142344	3300027656	Freshwater Lake	MLRRAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASIF
Ga0209033_12112542	3300027697	Freshwater Lake	MLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIN
Ga0209443_12226561	3300027707	Freshwater Lake	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSYG
Ga0209617_100547834	3300027720	Freshwater And Sediment	QGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINT
Ga0209617_100578681	3300027720	Freshwater And Sediment	MLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASTLLI
Ga0209617_101434311	3300027720	Freshwater And Sediment	GQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMLIYRYL
Ga0209617_103781782	3300027720	Freshwater And Sediment	GNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSVR
(restricted) Ga0247833_10195697	3300027730	Freshwater	GQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTASILIYRHLH
Ga0209297_10104281	3300027733	Freshwater Lake	MLRGTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMFPISGC
Ga0209597_12152961	3300027746	Freshwater Lake	QWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMHLH
Ga0209444_1000530210	3300027756	Freshwater Lake	MLRRAGQWQGNRSPDNQTANKLVDAGGSWFEDVGSTPTASIFSY
Ga0209296_11456641	3300027759	Freshwater Lake	MLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFSV
Ga0209598_100891581	3300027760	Freshwater Lake	QGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMHLH
Ga0209598_102333671	3300027760	Freshwater Lake	QGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIIPIFG
Ga0209086_100561103	3300027770	Freshwater Lake	RTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMHLH
Ga0209086_101904231	3300027770	Freshwater Lake	GNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYMHLH
Ga0209107_100452233	3300027797	Freshwater And Sediment	MLRSTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMFPIFG
Ga0209550_100458491	3300027892	Freshwater Lake	QGNRTPDNQAANKLVDAGGIWFEDVGSTPTASMFPIYG
Ga0209400_10327681	3300027963	Freshwater Lake	MLRRTGQWQGNRPPDNQAANKLVDAGGSWFEDVGSTPTASILIYRHLNQYYCLVGI
Ga0209400_12421821	3300027963	Freshwater Lake	TWMLRSTGQWQGNRTPDNQAANKLVDAGGSWFEDVGSTPTASNLLSQD
Ga0304730_11996581	3300028394	Freshwater Lake	TGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASILIYKYLQ
(restricted) Ga0247839_11513732	3300028553	Freshwater	GNRTPDNQAANKLVDAGGSWFEDVGSTPTASILIYRHLH
(restricted) Ga0247832_10643243	3300028557	Freshwater	QGNRTPDNQAANKLVDAGGSWFEDVGSTPTASILIYRHLH
Ga0315904_100803996	3300031951	Freshwater	MLRRTGQWQGNRTPDNQAANKLVDAGGIWFEDVGSTPTASINI
Ga0335049_0874166_407_523	3300034272	Freshwater	QGNRTPDNQAANKLVDAGGIWFEDVGSTPTASIFPISG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters