Basic Information | |
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Family ID | F057595 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 136 |
Average Sequence Length | 52 residues |
Representative Sequence | MTAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP |
Number of Associated Samples | 91 |
Number of Associated Scaffolds | 136 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 66.17 % |
% of genes near scaffold ends (potentially truncated) | 29.41 % |
% of genes from short scaffolds (< 2000 bps) | 87.50 % |
Associated GOLD sequencing projects | 79 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.72 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (75.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.206 % of family members) |
Environment Ontology (ENVO) | Unclassified (27.941 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (69.118 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 57.50% β-sheet: 0.00% Coil/Unstructured: 42.50% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.72 |
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SCOP family | SCOP domain | Representative PDB | TM-score |
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a.47.3.1: Cag-Z | d1s2xa1 | 1s2x | 0.93218 |
d.67.3.1: Ribosome recycling factor, RRF | d1dd5a_ | 1dd5 | 0.88231 |
d.67.3.1: Ribosome recycling factor, RRF | d1ek8a_ | 1ek8 | 0.87501 |
d.67.3.1: Ribosome recycling factor, RRF | d1wqga_ | 1wqg | 0.85888 |
e.29.1.2: RNA-polymerase beta-prime | d4g7hd_ | 4g7h | 0.82321 |
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Pfam ID | Name | % Frequency in 136 Family Scaffolds |
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PF00216 | Bac_DNA_binding | 5.15 |
PF00239 | Resolvase | 1.47 |
PF04226 | Transgly_assoc | 1.47 |
PF09851 | SHOCT | 0.74 |
PF08401 | ArdcN | 0.74 |
PF00486 | Trans_reg_C | 0.74 |
PF00027 | cNMP_binding | 0.74 |
PF13505 | OMP_b-brl | 0.74 |
PF06186 | DUF992 | 0.74 |
PF11074 | DUF2779 | 0.74 |
PF05222 | AlaDh_PNT_N | 0.74 |
PF04828 | GFA | 0.74 |
PF01527 | HTH_Tnp_1 | 0.74 |
PF00872 | Transposase_mut | 0.74 |
PF13936 | HTH_38 | 0.74 |
COG ID | Name | Functional Category | % Frequency in 136 Family Scaffolds |
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COG0776 | Bacterial nucleoid DNA-binding protein IHF-alpha | Replication, recombination and repair [L] | 5.15 |
COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | Replication, recombination and repair [L] | 1.47 |
COG2261 | Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family | General function prediction only [R] | 1.47 |
COG2452 | Predicted site-specific integrase-resolvase | Mobilome: prophages, transposons [X] | 1.47 |
COG3328 | Transposase (or an inactivated derivative) | Mobilome: prophages, transposons [X] | 0.74 |
COG3791 | Uncharacterized conserved protein | Function unknown [S] | 0.74 |
COG4227 | Antirestriction protein ArdC | Replication, recombination and repair [L] | 0.74 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 75.00 % |
All Organisms | root | All Organisms | 25.00 % |
Visualization |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 27.21% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 13.24% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 11.76% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 11.03% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 5.15% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 4.41% |
Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 3.68% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 3.68% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.94% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 2.21% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 2.21% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.21% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.47% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.74% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.74% |
Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 0.74% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.74% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.74% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.74% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.74% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.74% |
Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.74% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.74% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.74% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.74% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2189573002 | Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml) | Environmental | Open in IMG/M |
2189573003 | Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml) | Environmental | Open in IMG/M |
2189573005 | Grass soil microbial communities from Rothamsted Park, UK - FG3 (Nitrogen) | Environmental | Open in IMG/M |
3300003505 | Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924) | Environmental | Open in IMG/M |
3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300005165 | Soil and rhizosphere microbial communities from Laval, Canada - mgHMC | Environmental | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
3300006047 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 | Environmental | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006052 | Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013 | Environmental | Open in IMG/M |
3300006059 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012 | Environmental | Open in IMG/M |
3300006086 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 | Environmental | Open in IMG/M |
3300006102 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013 | Environmental | Open in IMG/M |
3300006174 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014 | Environmental | Open in IMG/M |
3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
3300006354 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 | Environmental | Open in IMG/M |
3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
3300007982 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG | Environmental | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009683 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG | Environmental | Open in IMG/M |
3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300012198 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG | Environmental | Open in IMG/M |
3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
3300016357 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 | Environmental | Open in IMG/M |
3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
3300016422 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 | Environmental | Open in IMG/M |
3300018006 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4 | Environmental | Open in IMG/M |
3300019362 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2) | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300022557 | Paint Pots_combined assembly | Environmental | Open in IMG/M |
3300022709 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022726 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300027090 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes) | Environmental | Open in IMG/M |
3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
3300027889 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes) | Environmental | Open in IMG/M |
3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300027910 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes) | Environmental | Open in IMG/M |
3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
3300031782 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20 | Environmental | Open in IMG/M |
3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
3300031942 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176 | Environmental | Open in IMG/M |
3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
3300032119 | Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
3300033290 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
FE1_05982490 | 2189573002 | Grass Soil | LLAFIYVFGICVVAAILFVSVEEIEPNRRYALALKFLIVFVTAVAVGARLMP |
FE2_06397910 | 2189573003 | Grass Soil | LPNFSIWVVATTLFVAVNNIEPNRLLALALKFLIVFVSVGAIAGRL |
FG3_09030680 | 2189573005 | Grass Soil | KEMLAVIYTFGISVVAAFLFVAVNDIEPNRRFASALKFLIVFVSVAAVARRLMP |
JGIcombinedJ51221_100048961 | 3300003505 | Forest Soil | MPAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP* |
JGIcombinedJ51221_100727912 | 3300003505 | Forest Soil | MLAVIYTFSISVVAAFLFAAVNAIEPNRRYASVLKFLIVFGSVAAIAGRLMP* |
JGIcombinedJ51221_102083421 | 3300003505 | Forest Soil | MLAVIYVFGICVVAAFMFAAVNAIEPNRRLALAFKSLIVFVSVAAIAGRVMP* |
JGIcombinedJ51221_102968701 | 3300003505 | Forest Soil | MLAVIYVIGISVVAAFLFAAVNEIEPDRRLALALKFLIVFVGVGAIAGRLTP* |
Ga0062389_1043475851 | 3300004092 | Bog Forest Soil | LLAFIHVFSVCVVAAILFVSVDEIEPNRRYALVLKFLIVFVSVAAVAGRLMR* |
Ga0062589_1016963362 | 3300004156 | Soil | MNLRPERREMSDGIYIFGISFAGTILFVAVHKMEPNRRYGLVLKFLIVFVSVAAIAGRLGMH* |
Ga0066869_100232762 | 3300005165 | Soil | LLAFIYVFGICVVAAILFVSVDEIEPNRRYALALKFLIVFVGVGAIVGRLTP* |
Ga0070670_1014442661 | 3300005331 | Switchgrass Rhizosphere | MLADIYIFGIISVGTVLFLAVDKIEPNRRYASVLKFLIIFVSVAAIARRLVP* |
Ga0066388_1035793831 | 3300005332 | Tropical Forest Soil | MSAVMYVVVISIIAALLFVAVNNIEPNRRYAVALKVLIVFVSVAAITGRLGIH* |
Ga0066388_1083413562 | 3300005332 | Tropical Forest Soil | MSAVIYVVVISVVAAMLFAAVHNIEPNRHYASVFRLLIVFVSVAAITGRLGIN* |
Ga0070671_1004841193 | 3300005355 | Switchgrass Rhizosphere | MSAVMYVVVIGIVAALLFVAVNNIEPNRRYALALKVLIVFVSVAAIAGRLGIH* |
Ga0070659_1009417032 | 3300005366 | Corn Rhizosphere | MNSKPEGGDGAVIYAFGISVVAAILFLAVDNIEPNRRYALVLKLLIVFVSVAAVAGRLMP |
Ga0070667_1016150541 | 3300005367 | Switchgrass Rhizosphere | MYVVVIGIVAALLFVAVNNIEPNRRYALALKVLIVFVSVAAIA |
Ga0070714_1017318872 | 3300005435 | Agricultural Soil | MLGLIYIIAIWVIATILFVTVDKIEPNRRYALVLKLLIVFISGVAIAGRLMP* |
Ga0070664_1007611402 | 3300005564 | Corn Rhizosphere | MLADIYIFGIISVGTVLFLAVDKIEPNRRYASVLKFLIIFVTVAAIARRLLP* |
Ga0070762_101010911 | 3300005602 | Soil | MLAFIYVFGICVVATILLVAVDDVEPNRRYASVLKFLIVFVSVVAIARRLMP* |
Ga0070762_101316283 | 3300005602 | Soil | MLAVTYVFGICVVAAFMFAAVNAIEPNRRLALAFKSIIAFVSVAAIAGRVMP* |
Ga0070766_104576252 | 3300005921 | Soil | WNVRMPAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP* |
Ga0070717_103195211 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MSDGIYIFGISFVGTVLFFAVDKVEPNRRYASVLKFLIIFVSVAAIARRLGMN* |
Ga0075023_1000638223 | 3300006041 | Watersheds | LLAFIYVFGICVVAAILFVSVEEIEPNRRYALALKFLIVFVTAVAVAARLMP* |
Ga0075023_1001198271 | 3300006041 | Watersheds | VLYVFVISVVAAFLFAAVNVIEPNRRYASVLKLLIVFVSAAAIARRLMP* |
Ga0075023_1003161081 | 3300006041 | Watersheds | LLAFIHIFSVCVVAAILFVAVDDLEPNRRYASVLKFLIVF |
Ga0075024_1002456192 | 3300006047 | Watersheds | AVIYVFGICVYVFSICIVATILFVSVDAIEPNRRYASVLKLLIVFVSAAAIARRLMP* |
Ga0075028_1010735452 | 3300006050 | Watersheds | MLAVIYTFGISVVAAFLFAAVNEIEPDRRLALALKFLIVFVGVGAIAGRLTP* |
Ga0075029_1009936721 | 3300006052 | Watersheds | MLAVIYVFGICVYVFSICIVATILFVSVDAIEPNRRYASVLKLLIVFVSAAAIARRPMP* |
Ga0075017_1000323668 | 3300006059 | Watersheds | VFSICIVATILFVSVDAIEPNRRYASVLKLLIVFVSAAAIARRLMP* |
Ga0075019_100964804 | 3300006086 | Watersheds | LLAFIYVFGICVVAAILFVSVDEIEPNRRYALALKFLIVFVTAVAVAARLMP* |
Ga0075019_108140421 | 3300006086 | Watersheds | MLAVIYVFGICVVAAFLFAAVDAIEPNRRYASVLKFLIVFVSVGAIAGRVMP* |
Ga0075015_1001686033 | 3300006102 | Watersheds | MTAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP* |
Ga0075014_1000570994 | 3300006174 | Watersheds | LLAFIHVFSVCVVAAILYVSVDEIEPNRRYALVLKFLIVFVSVAAVAGRLMR* |
Ga0075014_1002879603 | 3300006174 | Watersheds | AFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP* |
Ga0070765_1004344932 | 3300006176 | Soil | MLAVIYVFGICVVAAFMFAAVNAIEPNRRLALAFKSIIAFVSVAAIAGRVMP* |
Ga0075021_101303711 | 3300006354 | Watersheds | MLAVIYVFGICVYVFSICIVATILFVSVDAIEPNRRYASVLKLLIVFVSTAAIARRLMP* |
Ga0073928_100856396 | 3300006893 | Iron-Sulfur Acid Spring | MLALIYVFGIRVVATILLVAVDDLEPNRRYASVLKFLIVFVSVV |
Ga0102924_10932113 | 3300007982 | Iron-Sulfur Acid Spring | MLALIYVFGIRVVATILLVAVDDLEPNRRYASVLKFLIVFVSVVAIARRLMP* |
Ga0102924_11934362 | 3300007982 | Iron-Sulfur Acid Spring | MLGFSYVLSICVVATILFVAVEDLEPNRRYGSALKLLIVFVSAVAIARRLMP* |
Ga0105240_102310811 | 3300009093 | Corn Rhizosphere | MSAVIYVVIIGVVATMLFRAVNNIEPNRRYASVLKFLIVTV |
Ga0116224_101046893 | 3300009683 | Peatlands Soil | MLAFIHVFSICVVATILFVSVDEVEPNPRLALALKFLIVFVSVVAIAGRLMP* |
Ga0127503_110160531 | 3300010154 | Soil | MLYVLGISVVAGILFVAVNEFEPDRRLALTLKFLILAVSVAATAGRLTN* |
Ga0126378_111352481 | 3300010361 | Tropical Forest Soil | IYVFGIGVVGGTMFVAVDNIEPNRRYALVLKLLIVFVSVAAIAGRLVL* |
Ga0150983_116304432 | 3300011120 | Forest Soil | MPAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSGAAIAGRLMP* |
Ga0137364_106742151 | 3300012198 | Vadose Zone Soil | MLAVIYVFGISFVAAFMFAAVNAIEPNRRYALALKFLIVFVSVVAIARRLMP* |
Ga0164300_101992622 | 3300012951 | Soil | MLPFIYVFIICVVASVLFVAVDEFEPNRRYASVLKLLIVFVSVVAIATRLMP* |
Ga0164300_102445771 | 3300012951 | Soil | MLAFIYIFGISVVAAFLFEAVDKIEPNRRYASVLKFLIVFVSVAAIARRLMS* |
Ga0164301_106469751 | 3300012960 | Soil | MLPFIYVFMICVVASVLFVAVDEFEPNRRYASVLKLLIVFVSVVAIATRLMP* |
Ga0164302_106233803 | 3300012961 | Soil | MLYVLGISVVAGILFVAVNEFGPDRRLALTLKFLILAVSVAATAGRLTN* |
Ga0164307_101160072 | 3300012987 | Soil | MLAVIYTFGINVVAAFLFESVDKIEPNRRYASVLKFLIVFVSVAAIARRLMS* |
Ga0164307_117919761 | 3300012987 | Soil | MLAVIYVIGISVVAAFLFAAVNEIEPDRRLALALKFLIVLVTAVAIARRLMP* |
Ga0164307_118094131 | 3300012987 | Soil | MLPFIYVFIICVVASVLFVAVDEFEPNRRYASVLKLLIVFVS |
Ga0164305_112526631 | 3300012989 | Soil | RGGKEMLAVIYTFGISVVAALLFAAVDEIEPNRRYASVLKLLIVFVSVAAIARRLMS* |
Ga0132258_128336062 | 3300015371 | Arabidopsis Rhizosphere | VNLKPGAVIYVLGISVVAAILFVAVDNVEPNRRFALVLKFLIVFVSVAAVAGRLMP* |
Ga0182036_107545181 | 3300016270 | Soil | MSAGIYVFGICVVGGTMFVAVDNIEPNRRYALVLKLLVVFVSVAA |
Ga0182041_105693731 | 3300016294 | Soil | MSGLYVFGISFVAGMLFLAVDYIEPNRRYASVLKLLIVFVSVAAIAERVMP |
Ga0182033_110211742 | 3300016319 | Soil | AVIYVFGISFVAALLFVAVNNTEPNRLYALALKLLLVFVSVAAIAERVMP |
Ga0182033_118699461 | 3300016319 | Soil | LGREMSAVMYVVGIGVVAAMLFRAVNNIEPNRRLAQVLKFLIVFVSVAAIAGRLGPH |
Ga0182032_111253801 | 3300016357 | Soil | KCRGYIRLRISFVAALLFVAVNNTEPNRLYALALKLLIVFVSVAAIAGRVMP |
Ga0182032_112008661 | 3300016357 | Soil | WGAGDFSHCVGLALERMEMSAGIYVFGIGVVGGTMFVAVDNIEPNRRYALVLKLLIVFVSVAAIAGRLVL |
Ga0182032_114319061 | 3300016357 | Soil | MSDGMYVFGISFVGTILFVAVDKIEPNRRYALVLKFLIIFVSVAAIARRLMP |
Ga0182034_111418812 | 3300016371 | Soil | MSAVNYIVGICVVAAMWFRAVNNIEPNRRLAQVLKFLIVFVSVAAIAGRLGPH |
Ga0182040_109518901 | 3300016387 | Soil | MSAGIYVFGICVVGGTMFVAVDNIEPNRRYALVLKLLVVFVSVAAIAGRLVP |
Ga0182040_115605291 | 3300016387 | Soil | MSAVIYIVGICVVAAMLFRAVNNIEPNRRLAQVLKFLIVFVSVAVIAGRLGRIN |
Ga0182039_118904821 | 3300016422 | Soil | MSAVIYIVGICVVAAMLFRAVNNIEPNRRLAQVLRFLIVFVSIAAIAGRLGPH |
Ga0187804_105714631 | 3300018006 | Freshwater Sediment | MLAVIYVFVISVVAAFLFSAVNVIEPNPRLALAFKFLIVFASVAAVAGRLMP |
Ga0173479_107005641 | 3300019362 | Soil | NLRPERREMSDGIYIFGISFAGTILFVAVHKMEPNRRYGLVLKFLIVFVSVAAIAGRLGM |
Ga0210407_100513516 | 3300020579 | Soil | MTAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP |
Ga0210407_100543614 | 3300020579 | Soil | MLAVIYVFGICVYVFGICVVATILFVAVDDLEPNRRYASVLKFLI |
Ga0210407_100556265 | 3300020579 | Soil | MLAFIYVFGICVVATILLVAVDDVEPNRRYASVLKFLIVFVSVVAIARRLMP |
Ga0210407_100703003 | 3300020579 | Soil | MLAVIYTFSISVVAAFLFAAVNAIEPNRRYASVLKFLIVFGSVAAIAGRLMP |
Ga0210407_101981752 | 3300020579 | Soil | MLAVIYVFGICVYVFSICIVATILFVSVDAIEPNRRYASVLKLLIVFVSAAAIARRLMP |
Ga0210407_102283573 | 3300020579 | Soil | MLAVIYVFGICVVAAFMFAAVNAIEPNRRLALAFKSLIVFVSVAAIAGRVMP |
Ga0210407_104912281 | 3300020579 | Soil | VICVVATMLFVVVDEFEPNRRYALVLKFLIVFTSVAAIARRLMP |
Ga0210407_105152612 | 3300020579 | Soil | MLYVLGISVVAGILFVAVNEFEPDRRLALTLKFLILAVSVAATAGRLTN |
Ga0210407_106544682 | 3300020579 | Soil | LLAFIYVFGICVVAAILFVSVEEIEPNRRYALALKFLIVFVTAVAVAARLMP |
Ga0210407_106864732 | 3300020579 | Soil | MLAVIYVIGISVVAAFLFAAVNEIEPDRRLALALKFLIVFVGVGAIAGRLTP |
Ga0210407_107956491 | 3300020579 | Soil | MLAFIYVFSIWVVATTLFVAVNEIEPNPRLALAFKFLIVFVSLAAVAGRLMP |
Ga0210407_114654081 | 3300020579 | Soil | MGSVGHWNVRMTAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP |
Ga0210403_101095857 | 3300020580 | Soil | LLPKKRGKEMLAVIYTFSISVVAAFLFAAINEIEPNRRYASVLKFLIVFVSVAAIAGRLM |
Ga0210403_105164622 | 3300020580 | Soil | MLAVIYVFGICVVAAFMFAAVNAIEPNRRLALAFKSLVVFVSVAAIAGRVMP |
Ga0210399_100312002 | 3300020581 | Soil | MPAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP |
Ga0210399_105726162 | 3300020581 | Soil | MLAVIYTFSISVVAAFLFAAINEIEPNRRYASVLKFLIVFVSVAASQED |
Ga0210395_109469011 | 3300020582 | Soil | MLAFIYVFSIWVVPTTLFVAVNEIEPNPRLALAFKFLIAFASVAAVAGRLMP |
Ga0210404_103265011 | 3300021088 | Soil | NVRMTAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP |
Ga0210406_100509255 | 3300021168 | Soil | MLAIIYIFSISVAAAVLAVNEFEPDRFLALALKFVIVFVSVAAAAGKLMH |
Ga0210405_104589291 | 3300021171 | Soil | WNVRMTAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP |
Ga0210408_105106071 | 3300021178 | Soil | LLWPPLPKRGKEMLAVIYTFAISVVAAFLFAAVNNIEPNRLLALALKLLIVFVSVGAIAGRLMP |
Ga0210393_104687122 | 3300021401 | Soil | MLAVIYVFGICVVAAFMFAAVKAIEPNRRLALAFKSLIVFVSVAAIAGRVMP |
Ga0210393_106854131 | 3300021401 | Soil | VFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP |
Ga0210387_112636771 | 3300021405 | Soil | WNVRMPAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP |
Ga0210394_107986612 | 3300021420 | Soil | MLAFIYVFSIWVVATTLFVAVNEIEPNPRLALALKFLIVFASVAAVAGRLMP |
Ga0210394_109423031 | 3300021420 | Soil | LAVIYVIGISVVAAFLFAAVNEIEPDRRLALALKFLIVFVGVGAIAGRLTP |
Ga0210394_113358311 | 3300021420 | Soil | FIYVFGICVVATILLVAVDDLEPNRRYASVLKFLIVFVSVVAIARRLMP |
Ga0210391_109979762 | 3300021433 | Soil | MPAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIART |
Ga0210391_113512631 | 3300021433 | Soil | AFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP |
Ga0210409_107874381 | 3300021559 | Soil | MLAFIYVFSIWVVATTLFVAVNEIEPNPRLALAFKFLIAFASVAAVAGRLMP |
Ga0212123_100334615 | 3300022557 | Iron-Sulfur Acid Spring | MLALIYVFGIRVVATILLVAVDDLEPNRRYASVLKFLIVFVSVVAIARRLMP |
Ga0212123_103530722 | 3300022557 | Iron-Sulfur Acid Spring | MLGFSYVLSICVVATILFVAVEDLEPNRRYGSALKLLIVFVSAVAIARRLMP |
Ga0222756_10380491 | 3300022709 | Soil | MLAVIYVFGICVVAAFMFAAVKAIEPNRRLALAFKSLIVFVSVAAIAGRVM |
Ga0242654_102220502 | 3300022726 | Soil | MLAVIYTFSISVVAAFLFAAVNEIEPDRRLALALKFLIVFVGVGAIAGRLTSQRT |
Ga0228598_10285152 | 3300024227 | Rhizosphere | MLAVIYVIGISVVAAFLFAAVNEIEPDRRLALALKFLIVFVGVGAIVGRLTP |
Ga0207650_110435871 | 3300025925 | Switchgrass Rhizosphere | WLECRRMNLRAGGEMLADIYIFGIISVGTVLFLAVDKIEPNRRYASVLKFLIIFVTVAAIARRLLP |
Ga0207679_112014631 | 3300025945 | Corn Rhizosphere | MNLRPERREMSDGIYIFGISFAGTILFVAVHKMEPNRRYGLVLKFLIVFVSVAAIAGRLGMH |
Ga0208604_10109621 | 3300027090 | Forest Soil | QLRCASSASASLPVAVDDLEPNRRYASVLKFLIVFVSAAAIARRPMP |
Ga0209275_100754724 | 3300027884 | Soil | MLAVTYVFGICVVAAFMFAAVNAIEPNRRLALAFKSIIAFVSVAAIAGRVMP |
Ga0209380_103623772 | 3300027889 | Soil | NWNVRMPAFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAIAGRLMP |
Ga0209068_107835962 | 3300027894 | Watersheds | MLAFIHVFSICIVATILFVSVDAIEPNHRYASVLKLLIVFVSTAAIARRLMP |
Ga0209583_103149942 | 3300027910 | Watersheds | MLAFIYVFSIWVVAITLFVAVNEIEPNPRLALAFKFLIVFAGAAAIARRLMP |
Ga0308309_104304093 | 3300028906 | Soil | MLAVIYVFGICVVAAFMFAAVNAIEPNRRLALAFKSIIAFVSVAAIAGRVMP |
Ga0222749_102914282 | 3300029636 | Soil | ISVVAAFLFAAVNEIEPDRRLALALKFLIVFVGVGAIAGRLTP |
Ga0170834_1003028641 | 3300031057 | Forest Soil | MTAFIYVFSIWVVATTLFVAVNNIEPNRHFVLALKLLIVFVSAAAVAGRLMP |
Ga0170823_137382931 | 3300031128 | Forest Soil | MTGFIYIFSIWVVATTLFVAVNNIEPNRHFVLALKLLIVFVSAAAVAGRLMP |
Ga0170824_1056515391 | 3300031231 | Forest Soil | GGALEMTGFIYIFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAVAGRLMP |
Ga0170824_1210337322 | 3300031231 | Forest Soil | MLYVFVISNVAAMLFVAVNNIEPNRRYASALKFLIVVVSVAAIARRLMP |
Ga0170820_127990472 | 3300031446 | Forest Soil | MTGFIYIFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAAAVAGRLMP |
Ga0310686_1023161501 | 3300031708 | Soil | MTGFIYIFSIWVVATMLFVAVNNIEPNRHFALALKFLIVFVSAAAIAGRLMP |
Ga0310686_1027716682 | 3300031708 | Soil | MLAVIYTFGISVVATFLFAAVNVVEPNRRYAWVLKFLIVFVSVAAIAGKLMP |
Ga0310686_1033049023 | 3300031708 | Soil | LAVMYVFGISVVAAILFVAVDNIEPNRRYALALKFLIVFVSVAAVAGRLIP |
Ga0310686_1100674931 | 3300031708 | Soil | MLYVFVIGNVAAMLFVAVNNIEPNRRYASALKFLIVVVSVAAIARRLMP |
Ga0310686_1144276532 | 3300031708 | Soil | LPKKRGKEMLAFIYTFSISVAAAFLFAAVNEFEPDRLLALALKFLVVFVSVAAIARRLTG |
Ga0310686_1155912703 | 3300031708 | Soil | MSAVIYTFGISVVAAFLFAAVNAIEPDRRVALAFKFLIVFVSVAAVAGRLMP |
Ga0310686_1182463731 | 3300031708 | Soil | AFIYVFSIWVVATTLFVAVNNIEPNRHFALALKLLIVFVSAATSAGRLMP |
Ga0310686_1195952792 | 3300031708 | Soil | LSIQLLVGEGLAGFHYVFGICVVAAILFVSVDEIEPNRRYALALKFLIVFVTAVAVAARLMP |
Ga0306917_114128262 | 3300031719 | Soil | MSAVTYVVGISVVAAILFVAFNNIESNRRLALALKVLIVFASVGQSHED |
Ga0318552_104909863 | 3300031782 | Soil | MSGLYVFGISFVAGMLFLAVDYIEPNRRYASVLKLLIIFVSVAAIAGRLMP |
Ga0306925_116799742 | 3300031890 | Soil | LRGSALERMEMSAGIYVFGICVVGGTMFVAVDNIEPNRRYALVLKLLVVFVSVAAIAGRLVP |
Ga0306923_103956591 | 3300031910 | Soil | MSTVIYIVGTCVVAAMLFRAVNNIEPNRRLAQVLKFLIVFVSVAAIAGRLGPH |
Ga0310916_113840761 | 3300031942 | Soil | MSAVIYIVGICVVAALLFRAVNNIEPNRRLAQVLKFLIVFVSVAVIAGRLGRIN |
Ga0318533_108269502 | 3300032059 | Soil | MSDGIYVLGISFVGTVLIVAVDKIEPNRRYALALKFLIVIVSVAAIAGRLGIH |
Ga0316051_10326231 | 3300032119 | Soil | MLAVIYVIGISVVAAFLFAAINEIEPNRRYASVLKFLIVFVSVAAIAGRLMP |
Ga0311301_1000376451 | 3300032160 | Peatlands Soil | MLAFIHVFSICVVATILFVSVDEVEPNPRLALALKFLIVFVSVVAIAGRLMP |
Ga0311301_100220941 | 3300032160 | Peatlands Soil | MLAVIYTFSVSVAAAFLFAAVNQFEPDRLLALALKFVIVFVSVAAVAGGLTH |
Ga0306920_1020511671 | 3300032261 | Soil | MSLRPEEEMSDGIYIFGISFVAAILFGAVDKIEPNRRLALVLKLLIVFVSITAIAARLMP |
Ga0306920_1023049761 | 3300032261 | Soil | MSAVIYVVGICVVAALLFRAVNNIEPNRRLAQVLKFLIVFVSVAAIAGRLGRIK |
Ga0318519_110469351 | 3300033290 | Soil | MSAVNYIVGICVVAAMLFRAVNNIEPNRRLAQVLKFLIVFVSIAAIAGRLGPH |
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