Metagenome / Metatranscriptome Family F057525

Basic Information
Family ID	F057525
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	56 residues
Representative Sequence	MAWRKTGHFHPAAEVLVLTCDVCERDIGYEDGRRPREHFQVSRHPNPGAI
Number of Associated Samples	128
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	5.15 %
% of genes from short scaffolds (< 2000 bps)	5.15 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Unclassified (94.118 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.382 % of family members)
Environment Ontology (ENVO)	Unclassified (19.853 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.941 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 17.95% Coil/Unstructured: 82.05%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF00076	RRM_1	63.24
PF00563	EAL	2.94
PF14106	DUF4279	2.94
PF02469	Fasciclin	1.47
PF13893	RRM_5	0.74
PF03693	ParD_antitoxin	0.74
PF00487	FA_desaturase	0.74
PF13426	PAS_9	0.74
PF07485	DUF1529	0.74
PF13328	HD_4	0.74
PF01176	eIF-1a	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	2.94
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	2.94
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	2.94
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	2.94
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	1.47
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	0.74
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.74
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.74
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.74

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
All Organisms	root	All Organisms	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
cellular organisms	root	All Organisms → cellular organisms	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.41 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.41 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005610\|Ga0070763_10443768	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	735	Open in IMG/M
3300017970\|Ga0187783_10002077	All Organisms → cellular organisms → Bacteria → Proteobacteria	14902	Open in IMG/M
3300021560\|Ga0126371_12570347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	617	Open in IMG/M
3300022532\|Ga0242655_10054418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	996	Open in IMG/M
3300023275\|Ga0247776_10324972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	569	Open in IMG/M
3300031543\|Ga0318516_10425644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	764	Open in IMG/M
3300032044\|Ga0318558_10669686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	519	Open in IMG/M
3300033805\|Ga0314864_0088486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	746	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.91%
Host-Associated	Host-Associated	8.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.24%
Plants	Host-Associated → Plants	8.09%
Aquatic	Environmental → Aquatic	3.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.56%
Freshwater	Environmental → Aquatic → Freshwater	3.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.94%
Peat	Environmental → Terrestrial → Peat	2.21%
Roots	Host-Associated → Plants → Roots	2.21%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.47%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.24%
Loam	Environmental → Terrestrial → Soil → Loam	13.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.21%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.47%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.47%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.21%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.21%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.21%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.21%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.21%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.47%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.47%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.47%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.74%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.74%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.74%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002678	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF126 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003551	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF147 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004117	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF222 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004118	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004138	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF246 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012383	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017560	Enriched backyard soil microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C BE-Lig BY (version 2)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020066	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030525	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO037SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030531	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030573	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO036SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031871	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0005477J37265_1065152	3300002678	Forest Soil	MAWRRSGLFHPAEEVLVVTCDVCERDIGYEDGRRPHEHFRITRHPNPGAIDQQEPAVAICSR
Ga0005498J51100_1102072	3300003551	Forest Soil	MAWRKSGLFHPAQEILVATCDVCERDIGYXDGRRPRDHFRISRHPNPGDIDDQDPAVT
Ga0058888_14273282	3300004102	Forest Soil	MAWRKSGLFHPAQEILIVTCDVCERDIGYEDGRRPREHFLISRHPNAGEIDDQEPAVTICSCECL
Ga0058893_12861072	3300004117	Forest Soil	MAWRKSGMFHPAQEILIVTCDVCERDIGYEDGRRPREHFLISRHPNAG*
Ga0058886_13530241	3300004118	Forest Soil	MAWRKSGLFHPAQEILVATCDVCERDIGYEDGRRPRDHFRISRHPNP
Ga0058901_10134291	3300004120	Forest Soil	MAWRKSGLFHPAQEILVVTCDVCERDIGYEDGRRPRDHFRISRHPNPGDIDD
Ga0058905_14927252	3300004138	Forest Soil	MAWRKSGTFHPPVEVLVLTCDVCACDIGHEDGRRPRAHFLV
Ga0058899_117810082	3300004631	Forest Soil	MAWRKTGSFHAPVEVLVLTCDVCACDIGHEDERRPRAHFRLSRHPNPGAIDDQAPAVVISPGNACVRSKERKE
Ga0066690_108461572	3300005177	Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDDQEPAVVICSRECLRAFV
Ga0066676_100527115	3300005186	Soil	MAWRTTATFHAPVEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDDQEPAV
Ga0068868_1014979891	3300005338	Miscanthus Rhizosphere	MSYRKSGKFLPAREVLVLTCDVCERDIGYEDERRPRPHLSVARHPNAGSLDDQQA
Ga0070714_1021152211	3300005435	Agricultural Soil	MAWRRSGLFHPAEEVLVVTCDVCERDIGYEDGRRPHEHFRITR
Ga0070735_105559601	3300005534	Surface Soil	MGWRKSGRFNPVEEILIVTCDVCERDIGYEDGSRPRDHFRISRHP
Ga0070684_1020566012	3300005535	Corn Rhizosphere	MSFRKTGRFLPAREVLVLTCDVCERDIGYEDERRPRPHLSVARHPNAGTLDDQRPEAVVCSR
Ga0070731_110403862	3300005538	Surface Soil	MGWRKSGRFNPAQEILVVTCDVCERDIGYEDGRRPREHFRISRHPNPGAIDDQEP
Ga0068853_1012201492	3300005539	Corn Rhizosphere	MSYRKSGKFLPAREVLVLTCDVCERDIGYEDERRPRPHLSVARHPNAGSLDDQ
Ga0070733_111504692	3300005541	Surface Soil	MGWRKSGRFNPVEEILIVTCDVCERDIGYEDGSRPRDHFRISRHPNPGAI
Ga0070686_1012524421	3300005544	Switchgrass Rhizosphere	MGHRKTGVFHAPEEIVVLTCDVCERDIGNEDGRRPKDHFEVSRHPNPGGLHGQAPAVILCSCE
Ga0066704_103870801	3300005557	Soil	MAWRKTATFHAPVEVLVLTCDVCACDIGHEDERRPRAHFRLSRHPNPG
Ga0066704_105217481	3300005557	Soil	MGWRKTGLFHPAEEVLIMTCDVCERDIGYEDGRRPHEHFRVSRHPNPGAIDDQAPAV
Ga0066708_108685283	3300005576	Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRPRAHF
Ga0066691_109532332	3300005586	Soil	MAWRKTATFHAPVEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDDQEP
Ga0070763_104437682	3300005610	Soil	MGWRKTGLFHPAEEVMVLTCDVCERDVGYEDGRRPHEHFRVTRHP
Ga0068861_1020171591	3300005719	Switchgrass Rhizosphere	MGFRRSGTFQPAQEILIATCDVCERDIGYEDGRRPTVHLRVSRYPNSGSIDHQEPA
Ga0066696_105942412	3300006032	Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPKSWCDR*
Ga0070765_1010127922	3300006176	Soil	MAWRKSGLFHPAQEILVVTCDVCERDIGYEDGRRPRDHFRISRHPNPGDIDDQD
Ga0116101_11359191	3300009759	Peatland	MASRNTGTFHPAEQIVVMTCDVCQRDIGHEDGRRPNEHFRITRHPNPGAFDNQAPAVLVCSGECMRSFAASSQMHRPPG*
Ga0134082_104936001	3300010303	Grasslands Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDD
Ga0134109_101481751	3300010320	Grasslands Soil	MAWRKTATFHAPVEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDDQEPGVVIC
Ga0134064_100037358	3300010325	Grasslands Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRPRAHFQLSR
Ga0134080_100245221	3300010333	Grasslands Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDDQ
Ga0134080_103347681	3300010333	Grasslands Soil	MGWRKSGLFRPAEEVLVITCDVCERDIGYEDGSRPREHFRISRHPNPGA
Ga0134125_120803321	3300010371	Terrestrial Soil	MAWRKTGNFSPAQEIMVLTCDVCERDIGYEDGRRPHEHFRVSRHPNPGAIDDQEPAAIICSCECLRAFA
Ga0134125_123152321	3300010371	Terrestrial Soil	MSYRKSGKFLPAREVLVLTCDVCERDIGYEDERRPRPHLSVARHPNAGSLDDQQAEAILCSRECL
Ga0134126_102209011	3300010396	Terrestrial Soil	MGWRKTGLFRNPEEILVLTCDVCERDIGTEDEHRPRPHFRVTCHPNRGARDDQ*
Ga0150983_132507052	3300011120	Forest Soil	MAWRKTGLHHPAQEILVMTCDVCERDIGHEDGRRPHPHFRVSRHPNAGTIDDQEP
Ga0137362_112737282	3300012205	Vadose Zone Soil	MAWRKTGAFHAPVEVLVLTCDVCACDIGHQDERRPRAHFRVSRHPNPGAIDDQAPAVVICSRECLRAFVANA
Ga0137377_106497541	3300012211	Vadose Zone Soil	MAWRKTATFHAPVEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDDQEPAVV
Ga0134028_11322691	3300012224	Grasslands Soil	MAWRKTATFHAPVEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAID
Ga0137387_101730881	3300012349	Vadose Zone Soil	MGWRKSGQFRPAEEVLVITCDVCERDIGYEDGRRPREHFRISRHPNPGAIDDQTPAVLVCSRECLRAYAA
Ga0137360_117518152	3300012361	Vadose Zone Soil	MAWRRTGVFRPAEEIFVMTCDVCERDIGYEDGRRPHEHFCVTRHPNPGGMDDQ
Ga0134033_12055431	3300012383	Grasslands Soil	MAWRKTATFHAPVEVLVLTCDVCACDIGHEDERRPRAHFQL
Ga0150984_1074910641	3300012469	Avena Fatua Rhizosphere	MGHRKTGAFHAPEEIVVLTCDVCERDIGNEDGRRPKDHFEVSRHPNPGGLNDQAP
Ga0137395_112250491	3300012917	Vadose Zone Soil	MAWRKTGAFHAPVEVLVLTCDVCACDIGHQDERRPRAHFRLSRHPNPGAIDDQAPAVVICSRECLRAF
Ga0137419_115930722	3300012925	Vadose Zone Soil	MAWRKTGSFHAPVEVLVLTCDVCACDIGHEDERRPRAHFRLSRHPNPGAIDDQAPAVAICSRE
Ga0134087_100059566	3300012977	Grasslands Soil	MGWRKSGVFRPAEEVLVITCDVCERDIGYEDGRRPREHFRISRHPNPGAIDDQTPAVLVCSRECLR
Ga0157369_114491432	3300013105	Corn Rhizosphere	MAWRKTGLFRPADEILVLTCDVCERDIGYEDGRRPQEHFRVSRHPNPGSIGDQEPDTA
Ga0157374_125572782	3300013296	Miscanthus Rhizosphere	MGHRKTGVFHAPEEIVVLTCDVCERDIGNEDGRRPKDHFEVSRHPNPGGLHG
Ga0163162_106297421	3300013306	Switchgrass Rhizosphere	MGHRKTGVFHSPEEIVVLTCDVCERDIGNEDGRRPKDHFRLSRHPNPGGLDDQAPTVILCSCE
Ga0134081_103519212	3300014150	Grasslands Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDDQEPAVVICSRE
Ga0134078_100084345	3300014157	Grasslands Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRP
Ga0163163_117444332	3300014325	Switchgrass Rhizosphere	MAWRKTGHFHPAAEVLVLTCDVCERDIGYEDGRRPREHFQVSRHPNPGAI
Ga0182024_117588192	3300014501	Permafrost	MAWRHSGTFHPAVEVQVLTCDVCGCDIGHEDGRRPRAHFLVSRLPN
Ga0137420_12844301	3300015054	Vadose Zone Soil	MGWRKTGLFHPAEEVLIMTCDVCERDIGYEDGRRPHEHFRVSRHPNPGAIDDQAPA
Ga0167668_10253661	3300015193	Glacier Forefield Soil	MAWRKSGTFHPPVEVLVLTCDVCACDIGHEDGRRPRAHFLL
Ga0167668_10503881	3300015193	Glacier Forefield Soil	VGSRKTGMFQPAEQVLILTCDVCECDIGYEDGRRPRAHLRVTRHPNAGAMNDQ
Ga0182041_102386184	3300016294	Soil	MGFRKTGTFHPAEEVLVLTCDVCERDIGHEDGRRPRRHLRVTQHPNAG
Ga0182038_102056994	3300016445	Soil	MGFRKTGTFHPPEEVLVLTCDVCERDIGHEDGRRPRRHLRVTQHPNAGTMDDQAPAIIVCSQECLRA
Ga0182747_11804482	3300017560	Soil	LGFRKTGRFDSPVEIAVLTCDVGERDIGHSDGRRPWPHLRLTRHPNTGALDDQ
Ga0187847_101243032	3300017948	Peatland	MASRNTGTFHPAEQIVVMTCDVCQRDIGHEDGRRPNEHFRITRHPNPGAFDNQAPAVLVCSAECMRSFAASSQMHRPPG
Ga0187783_1000207721	3300017970	Tropical Peatland	MGFRKIGTFHPAEDIRVLTCDVCEGAIGHKDGRRPRPYLRVKQCPSAGSDAHSGLTSGSE
Ga0187782_100332472	3300017975	Tropical Peatland	MGFRKIGTFHPAEDSRVLTCDVCEGAIGHKDGRRPRPYLRVKQCPSAGSDAHSGLTSGSE
Ga0187890_105446142	3300018044	Peatland	MASRNTGTFHPAEQIVVMTCDVCQRDIGHEDGRRPNEHFRITRHPNPGAFDNQAPAVLVCSGECMRSFAASSQMHRPPG
Ga0066655_112870571	3300018431	Grasslands Soil	MAWRKTATFHAPVEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDDQEPAV
Ga0066667_122856721	3300018433	Grasslands Soil	MAWRKTGNFHPAAEVLLLTCDVCERDIGYEDGRRPREHFQVSRHPNPGAIDDQEPVA
Ga0181514_12795971	3300019268	Peatland	MASRNTGNFHPAEQIVVMTCDVCQRDIGHEDGRRPNEHSRITRHPNPGAIDKQSPA
Ga0180108_11989061	3300020066	Groundwater Sediment	VGWRKTGAFHAAVEIAVLTCDVCERDIGYEDGRRPLAHFRLSRHPNQ
Ga0179596_100402594	3300021086	Vadose Zone Soil	MAWRKTGSFHAPVEVLVLTCDVCACDIGHEDERRPRAHFRVSRHPNPGAIDDQA
Ga0210400_109109062	3300021170	Soil	MAWRKSGLFHPAQEILVATCDVCERDIGYEDGRRPRDHFRISRHPNPGDIDDQDPAVTIC
Ga0213874_101824321	3300021377	Plant Roots	MGYRKTGVFQPAEQIVVLTCDICECDIGYEDGRRPRPHLRVTQHPNAGAINDQRPPAI
Ga0210393_116209012	3300021401	Soil	MGLRKTGVFHPPEEVVVLTCDVCERDIGNEDGRRPKEHFKISRHPNRGALDDQEPTALICSCEC
Ga0210397_103753353	3300021403	Soil	MAWRRSGLFHPAEEVLVVTCDVCERDIGYEDGRRPHEHFRITRHPNPGAIDQQEPAVAICSRECL
Ga0210390_107050531	3300021474	Soil	MAWRNSGTFHPAVEIQVLTCDVCGCDIGHADGCRPRA
Ga0210410_104388613	3300021479	Soil	MAWRRSGLFHPAEEVLVVTCDVCERDIGYEDGRRPHEHFRITRHPNPGAIDQ
Ga0126371_125703472	3300021560	Tropical Forest Soil	MGFRKTGTFQPAEEVPVLTCDVCERDIGHEDGRRPRRHLRV
Ga0242642_10440601	3300022504	Soil	MAWRRSGLFHPAEEVLVVTCDVCERDIGYEDGRRPHEHFRITRHPNPGAIDQQEPA
Ga0242659_10694942	3300022522	Soil	MAWRRSGLFHPAEEVLVVTCDVCERDIGYEDGRRPHEHFRVTRHPNPGAIDQQEPAVVICSRECLRAFAA
Ga0242656_10526091	3300022525	Soil	MAWRRSGLFHPAEEVLVVTCDVCERDIGYEDGRRPHEHFRVTRHPNPGAIDQQEPAVVICSREC
Ga0242664_10741112	3300022527	Soil	MAWRNSGTFHPAVEIQVLTCDVCGCDIGHADGRRPRAHFLVSRLPNPGGMDDQEPAVVICSRECLR
Ga0242664_10847582	3300022527	Soil	MAWRKSGTFHPPVEVLVLTCDVCGCDIGHEDGRRPRAHFLVSRLPN
Ga0242655_100544181	3300022532	Soil	MGYRNTGVFQPAEQIVVLTCDVCERDIGYEDGRRPRTHLRVAQHPNAGP
Ga0242655_102160931	3300022532	Soil	MAWRKSGLFHPAQEILVATCDVCERDIGYEDGRRPRDHFRISRHPNPGDIDDQDPAVT
Ga0242665_101923841	3300022724	Soil	MAWRKSGTFHPPVEVLVLTCDVCACDIGHEDGRRPRAHFLVSRLPNPGGMDDQ
Ga0247776_103249721	3300023275	Plant Litter	MSWRKSGNFRAPEEILILTCDVCACDIGYEDGRRPRRHFRVSEHPNPGGMDEQVPF
Ga0207684_116652461	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGWRKSGMFHPAEEILVMTCDVCERDVGYEDGGRPHEHFRISRHPNPGAIDAQE
Ga0207652_108147161	3300025921	Corn Rhizosphere	MSYRKSGKFLPAREVLVLTCDVCERDIGYEDERRPRPHLSVARHPNAG
Ga0209236_12304012	3300026298	Grasslands Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRPRAH
Ga0209153_10185205	3300026312	Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHQDERRPRAHFQLSRHPNPGAIDDQEPAV
Ga0209802_10743424	3300026328	Soil	MGLRKSGLFRPAEEVLVITCDVCERDIGYEDGRRPREHFRISRHPN
Ga0257161_11156972	3300026508	Soil	MAWRKTGSFHAPVEVLVLTCDVCACDIGYEDERRPRAHFRLSRHPNP
Ga0209378_10508761	3300026528	Soil	MGLRKSGLFRPAEEVLVITCDVCERDIGYEDGSRPREHFRISRHPNPGA
Ga0209806_12003522	3300026529	Soil	MAWRKTGSFHAPVEVLVLTCDVCACDIGHEDERRPRAHFRLSRHPNPG
Ga0209156_104356241	3300026547	Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDDQEPAVVICSRECL
Ga0209161_104752361	3300026548	Soil	MAWRKTATFHAPIEVLVLTCDVCACDIGHEDERRPRAHFQLSRHPNPGAIDDQEPAVVICSREC
Ga0209420_10081241	3300027648	Forest Soil	MAWRKTGTFHPPVEVLVLTCDVCACEIGHEDGRRPRAHFLLSRLPNPGAMDD
Ga0308309_106417023	3300028906	Soil	MAWRKSGLFHPAQEILVVTCDVCERDIGYEDGRRPRDHFRISRHPNPGDIDDQDPAVTICSCEC
Ga0302179_102395901	3300030058	Palsa	MASRNTGTFHPAEQIVVMTCDVCQRDIGHEDGRRPNEHFRITRHPNPGAFDNQAPAVLVCSGECMRSFAASSQMHRPP
Ga0307511_104221422	3300030521	Ectomycorrhiza	MAWRKTGLLRPAEEVLVLTCDVCERDIGYEDGRRPNEHFRVSRHPNPGGIDGQEPVATVCSRECLRA
Ga0210273_10304641	3300030525	Soil	MAWRNSGTFHPAVEVQVLTCDVCGCDIGHEDGRRPRAHFLVSRLPNPGAMDDQEPAVVICSR
Ga0210274_16068082	3300030531	Soil	MAWRNSGTFHPAVEVQVLTCDVCGCDIGHEDGRRPR
Ga0210272_12759101	3300030573	Soil	MAWRKSGLFHAAEEILVLTCDVCERDIGNEDGRRPHDHFRVSRHPNPG
Ga0302313_100188602	3300030693	Palsa	EQIVVMTCDVCQRDIGHEDGRRPNEHFRITRHPNPGAFDNQAPAVLVCSGECMRSFAASSQMHRPPG
Ga0170823_157051812	3300031128	Forest Soil	MAWRKTGTFLPAVEVLVLTCDVCACEIGHEDGRRPRAHFLL
Ga0170824_1011550022	3300031231	Forest Soil	MGYRKTGAFQPAEQIVVLTCDVCERDIGYEDGRRPRLHLRVAQHGLKKIKK
Ga0265340_102941212	3300031247	Rhizosphere	MASRNTGTFLPAEQILVITCDVCQRDIGHEDGRRPNEHFRITRHPNPGAIDNQAPPVLVCSSECLRSFAAS
Ga0170820_162246311	3300031446	Forest Soil	MAWRKTGTFLPAVEVLVLTCDVCACEIGHEDGRRPRAHFLLSRLPNPGAMDDQQPAVVICSRECLR
Ga0318516_104256441	3300031543	Soil	MGFRKTGTFHPAEEVLVLTCDVCERDIGHEDGRRPRRHLRVTQHPNAGAMDDQAPAIIVCSQECLRAYAA
Ga0307483_10251811	3300031590	Hardwood Forest Soil	MAWRRSGLFHPAEEVLVVTCDVCERDIGYEDGRRPHEHFRVTRHPNPGAIDQ
Ga0307484_1105431	3300031663	Hardwood Forest Soil	MAWRKSGLFHAAEEILVVTCDVCERDIGYEDGRRPHEHFRVTRHPNPGAIDQQEPPVVICSR
Ga0310686_1052811992	3300031708	Soil	MAWRKSGTFHPPVEVQVLTCDVCGCDIGHEDGRRPRPHFLVSRLPNPGAMDDQAPAVVICSRECLRAFAV
Ga0310686_1061030264	3300031708	Soil	MASRNTGTFHPAEQIVVLTCDICQRDIGHEDGRRPNEHFRITRHPNPGAIDNQAPAVLVCSAECMRSFAASAQLHRPSG
Ga0306917_101124775	3300031719	Soil	MGFRKTGTFHPAEEVRVLTCDVCERDIGHEDGRRPRPHLRVTHHPNAGAMDDQDPPIIVCSQE
Ga0307469_110801893	3300031720	Hardwood Forest Soil	MAWRKSGQFHPAEEILVVTCDVCERDIGYEDGRRPREHFRISRHPNPGAIDDQSPAVVI
Ga0307468_1019960832	3300031740	Hardwood Forest Soil	MAWRKSGLFHPAQEIRIVTCDVRKRDIGYEDGRRPREHSRAGRPPNPGVIDEQEPAVGRC
Ga0318492_105734101	3300031748	Soil	MGFRKTGTFHPAEEVRVLTCDVCERDIGHEDGRRPRPHLRVTHHPNAGAMDDQDPPI
Ga0307475_106235542	3300031754	Hardwood Forest Soil	MAWRKTGSFHAAVEVLVLTCDVCACDIGHEDERRPRAHFRLSRH
Ga0307475_115033312	3300031754	Hardwood Forest Soil	MAWRKSGMFHPAQEILIVTCDVCERDIGYEDGRRPREHFLISRHPNAGEIDDQE
Ga0318566_103173991	3300031779	Soil	MGFRKTGTFHPAEEVLVLTCDVCERDIGHEDGRRPRPHLRVTQHPNPGAMDDQAPAIIL
Ga0318576_103933291	3300031796	Soil	MGFRKTGTFHPAEEVLVLTCDVCERDIGHEDGRRPRRHLRVTQHPNAGAMDDQAPAIIV
Ga0318565_102669633	3300031799	Soil	MGFRKTGTFHPAEEVRVLTCDVCERDIGHEDGRRPRPHLRVTHHPNAG
Ga0302315_103641321	3300031837	Palsa	SRNTGTFHPAEQIVVMTCDVCQRDIGHEDGRRPNEHFRITRHPNPGAFDNQAPAVLVCSGECMRSFAASSQMHRPPG
Ga0316036_1115671	3300031871	Soil	MASRNTGPFHPAEQIVVVTCDICQRDIGHEDGRRPNEHFRITRHPNPGAIDNQAPAVLVC
Ga0310910_102559124	3300031946	Soil	MGFRKTGTFHPPEEVLVLTCDVCERDIGHEDGRRPRRHLRVTQHPNAGTMD
Ga0307479_106855483	3300031962	Hardwood Forest Soil	MAWRKTGVFHPAEEILVLTCDVCERDIGYEDGRRPHDHFRVSRHPNPGGIDDQEPVA
Ga0318558_106696862	3300032044	Soil	MGFRKTGTFHPAEEVRVLTCDVCERDIGHEDGRRPRPHLRVTHHPNAGA
Ga0318518_105577342	3300032090	Soil	MGLRKTGTFHPAEEVLVLTCDVCERDIGHEDGRRPRRHLRVTQHPNAGAMDDQAPAIIV
Ga0348332_119498861	3300032515	Plant Litter	MASRNTGTFHPAEQIVVVTCDICQRDIGHEDGRRPNEHFRITRHPNPGAIDNQAPAVLVC
Ga0315742_116126822	3300032756	Forest Soil	MAWRNSGTFHPAVEVQVLTCDVCGCDIGHEDGRRPRAHFLVSRLP
Ga0335079_101480185	3300032783	Soil	MAWRRSGLFHPAEEILVVTCDVCERDIGYEDGRRPHEHFRITRHPNPGAIDQQEPPVVVC
Ga0335069_106217684	3300032893	Soil	MAWRKSGLFHPAQEILIATCDVCERDIGFEDGRRPRDHFRISRHPNPGEIDDQEPAVTIC
Ga0335071_106765211	3300032897	Soil	MAWRRSGLFHPAEEILVVTCDVCERDIGYEDGRRPHEHFRITRHPNPGAI
Ga0335076_112168551	3300032955	Soil	MAWRRSGLFHPAQEILIVTCDVCERDIGYEDGRRPREHFRLSQHPNLGAIDAQDPDVTI
Ga0314864_0088486_563_745	3300033805	Peatland	MGYRKTGVFQPAEQIVVLTCDVCECDIGYEDGRRPRPHLRVTQHPNAGPINDQHPPAILC
Ga0370483_0129063_1_183	3300034124	Untreated Peat Soil	MASRNTGTFHPAEQIVVMTCDVCQRDIGHEDGRRPNEHFRITRHPNPGAFDNQAPAVLVC
Ga0370515_0448130_74_313	3300034163	Untreated Peat Soil	MASRNTGNFHPPEQVVVITCDVCQRDIGHEDGRRPNEHFRITRHPNPGAIDNQAPAVLVCSSECMRSFAASSQMHRPAG
Ga0370514_182407_319_543	3300034199	Untreated Peat Soil	MASRNTGTFHPAEHIVVITCDVCQRDIGHEDGRRPNEHFRITRHPNPGALDNQAPPVLVCSTECLRAFAAGTLMH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057525

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign