Metagenome / Metatranscriptome Family F057490

Overview

Basic Information

• Family ID: F057490
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 136
• Average Sequence Length: 45 residues
• Representative Sequence: MTTPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVAIVYAVWWYLA
• Number of Associated Samples: 100
• Number of Associated Scaffolds: 136

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 61.03 %
• % of genes near scaffold ends (potentially truncated): 27.21 %
• % of genes from short scaffolds (< 2000 bps): 84.56 %
• Associated GOLD sequencing projects: 90
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (94.118 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.294 % of family members)
• Environment Ontology (ENVO): Unclassified (55.147 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (65.441 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 41.67%
  β-sheet: 0.00%
  Coil/Unstructured: 58.33%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF02852	Pyr_redox_dim	41.91
PF07992	Pyr_redox_2	13.24
PF06897	DUF1269	5.88
PF03401	TctC	2.94
PF08534	Redoxin	2.94
PF08240	ADH_N	0.74
PF00005	ABC_tran	0.74
PF03358	FMN_red	0.74
PF00563	EAL	0.74
PF00462	Glutaredoxin	0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG4803	Uncharacterized membrane protein	Function unknown [S]	5.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.94
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.74
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.74
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.74
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.74

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.12 %
Unclassified	root	N/A	5.88 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.12 %
Unclassified	root	N/A	5.88 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.12 %
Unclassified	root	N/A	5.88 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.74 %
Unclassified	root	N/A	5.88 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	23.53 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.94 %
Unclassified	root	N/A	5.88 %

Level 6

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Ardenticatenia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	21.32 %
Unclassified	root	N/A	5.88 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.94 %

Level 7

Name	Rank	Taxonomy	Distribution
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	2.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Ardenticatenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales	0.74 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	16.18 %
Unclassified	root	N/A	5.88 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	2.94 %

Level 8

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Bordetella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella	0.74 %
Unclassified	root	N/A	5.88 %
unclassified Ardenticatenales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales → unclassified Ardenticatenales	0.74 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	16.18 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2.94 %

Level 9

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Ardenticatenales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales → unclassified Ardenticatenales → Ardenticatenales bacterium	0.74 %
Bordetella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella	0.74 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	16.18 %
Unclassified	root	N/A	5.88 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2.94 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2162886012|MBSR1b_contig_8014482	All Organisms → cellular organisms → Bacteria → Proteobacteria	1240
2199352024|deeps__Contig_179088	All Organisms → cellular organisms → Bacteria → Proteobacteria	2387
3300000033|ICChiseqgaiiDRAFT_c2082336	All Organisms → cellular organisms → Bacteria → Proteobacteria	714
3300000363|ICChiseqgaiiFebDRAFT_13526320	All Organisms → cellular organisms → Bacteria	527
3300003321|soilH1_10183849	All Organisms → cellular organisms → Bacteria → Proteobacteria	1131
3300003324|soilH2_10265359	All Organisms → cellular organisms → Bacteria → Proteobacteria	1337
3300003324|soilH2_10403897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	1004
3300004114|Ga0062593_100688710	All Organisms → cellular organisms → Bacteria → Proteobacteria	994
3300004114|Ga0062593_103430329	All Organisms → cellular organisms → Bacteria	509
3300004157|Ga0062590_102881792	All Organisms → cellular organisms → Bacteria → Proteobacteria	514

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	46.32%
Host-Associated	Host-Associated	53.68%

Class

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.68%
Terrestrial	Environmental → Terrestrial	46.32%

Category

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.29%
Roots	Host-Associated → Plants → Roots	1.47%
Soil	Environmental → Terrestrial → Soil	46.32%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.76%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.47%
Soil	Host-Associated → Plants → Rhizosphere → Soil	22.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.21%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	22.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.94%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.47%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	5.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.74%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.47%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.47%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.21%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated
2199352024	Bare-fallow DEEP SOIL	Environmental
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300003321	Sugarcane bulk soil Sample H1	Environmental
3300003324	Sugarcane bulk soil Sample H2	Environmental
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0727.00004950	2162886012	Miscanthus Rhizosphere	MTSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR
deeps_03343540	2199352024	Soil	MALPSRSAVGVYDRPHPLRTRKVLIPALVAIVTAMGYGAWFYFR
ICChiseqgaiiDRAFT_20823362	3300000033	Soil	MNAPSRKSVGIYDRPHPLRTRKVLIPALVAVAVTAVYAAWWWFAR*
ICChiseqgaiiFebDRAFT_135263202	3300000363	Soil	MTSPSPRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR*
soilH1_101838492	3300003321	Sugarcane Root And Bulk Soil	VEQRSSRNAVGVYDRPPAWRTRKVLVPVAIFVVVAIAYALYFLL*
soilH2_102653592	3300003324	Sugarcane Root And Bulk Soil	VEQRSSRNAVGVYDRPPAWRTRKVLVPVAIFVVVAVAYALYFLL*
soilH2_104038972	3300003324	Sugarcane Root And Bulk Soil	VPRTVGIYDRPHPLRTRKVLVPLAVAAVVALVYALWFYLS*
Ga0062593_1006887102	3300004114	Soil	MPPPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVIIGYALYFLLR*
Ga0062593_1034303291	3300004114	Soil	MTSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR*
Ga0062590_1028817922	3300004157	Soil	SPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR*
Ga0070658_100317752	3300005327	Corn Rhizosphere	MNDRPSGRSRNAVGVYERPHPLRTRKVLVPVVIFVLMALVYGLYFLLR*
Ga0070658_102535572	3300005327	Corn Rhizosphere	MPGGTVGVYDRPHPLRTRKVLVPAAIAVVVALGYAGWFYLR*
Ga0070658_103307362	3300005327	Corn Rhizosphere	MSDPGKPTTAASRNSVGVYDRPHPLRTRKVLVPTAIAVVVGIGYALWFYLR*
Ga0070676_103000002	3300005328	Miscanthus Rhizosphere	MAEPSRKSVGVYDRPHPLRTRKVLIPVIVAIVVAAAYALWAYLA*
Ga0070676_106445701	3300005328	Miscanthus Rhizosphere	MAEPSRKSVGVYDRPHPLRTRKVLIPVLVALVVAAAYALWAYLA*
Ga0070690_1002299332	3300005330	Switchgrass Rhizosphere	MTSPSRNTVGVYDRPHPLRTRKVMVPVLVAVVVTIGYAVFFYLR*
Ga0070670_1000557732	3300005331	Switchgrass Rhizosphere	MPPPQSRNTVGVYDRPHPLRTRKVLVPVLMAVVVVIAYALYFMLR*
Ga0070670_1001124211	3300005331	Switchgrass Rhizosphere	TARPEETPMTSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR*
Ga0070666_102120892	3300005335	Switchgrass Rhizosphere	MAEPSRKSVGVYDRPHPLRTRKVLIPVIVAIVVAVAYALWAHFA*
Ga0070666_104988842	3300005335	Switchgrass Rhizosphere	MTMPSRSTVGVYDRPHPLRTRKVMVPVIVAIVVTIAYAIWWYVA*
Ga0068868_1011502021	3300005338	Miscanthus Rhizosphere	MAEPSRKSVGVYDQPHPLRTRKVLIPVIVAIVVAVAYALWAHFA*
Ga0068868_1014257852	3300005338	Miscanthus Rhizosphere	EGTPMTSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR*
Ga0068868_1017089852	3300005338	Miscanthus Rhizosphere	MTAPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVAIVYAVWWYVA*
Ga0068868_1019304832	3300005338	Miscanthus Rhizosphere	MPPPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVIIGYALY
Ga0070661_1011746232	3300005344	Corn Rhizosphere	MPSRSSVGVYDRPHPLRTRKVVVPVLIAVVVAVAYAMWWYVG*
Ga0070692_107614892	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MNDRPSGRSRNAVGVYERPHPLRTRKVLVPVVIFVLMALVYGLYFLMR*
Ga0070673_1003291702	3300005364	Switchgrass Rhizosphere	MAEPSRKSVGVYDRPHPLRTRKVLIPVIVTIVVAVAYALWAHFA*
Ga0070659_1003081972	3300005366	Corn Rhizosphere	MPSRSSVGVYDRPHPLRTRKVVVPVLIAVVVAAAYAMWWYVG*
Ga0070659_1004593612	3300005366	Corn Rhizosphere	SAPHGPARPGKSPMPGGTVGVYDRPHPLRTRKVLVPAAIAVVVALGYAGWFYLR*
Ga0070714_1001179273	3300005435	Agricultural Soil	MNKQTRGAVGVYDRPHPLRTRKALVSAAVAIVVAAGYALWFYLR*
Ga0070711_1002985772	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPSRSSVGVYDRPHPLRMRKVVVPMLIAAVVAVAYAIGWYVG*
Ga0070662_1013002091	3300005457	Corn Rhizosphere	ITMAEPSRKSVGVYDRPHPLRTRKVLIPVIVAIVVAAAYALWAYLA*
Ga0070681_113203322	3300005458	Corn Rhizosphere	MPSPPRNTVGVYDRPHPLRTRKVLVPVLAAVVVTIAYALWWYLA*
Ga0068867_1020131421	3300005459	Miscanthus Rhizosphere	HQSARILMPEPSRKSVGVYDRPHPLRTRKVLLPVVIAIVVAAVYAMWAYLT*
Ga0070696_1010164682	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPRTVGVYDRPHPLRTRKVLVPLAVAAVAGLAYALWFYLR*
Ga0068855_1000338854	3300005563	Corn Rhizosphere	MPSRSSVGVYDRPHPLRTRKVVVPVLIAVVVAVAYAIWWYVG*
Ga0068864_1009437153	3300005618	Switchgrass Rhizosphere	RPSTEARITMAEPSRKSVGVYDRPHPLRTRKVLIPVIVAIVVAAAYALWAYLA*
Ga0068870_104478341	3300005840	Miscanthus Rhizosphere	RNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR*
Ga0075279_100244012	3300005903	Rice Paddy Soil	VSVSIPRKAVGVYDRPHPFRTRRVLVPAAVVAVTIAAYALWFFLT*
Ga0075422_102063581	3300006196	Populus Rhizosphere	MTSPSRNTVGVYDRPHPLRTRKVMVPVLVAVVVTLGYAVFFY
Ga0097621_1002580542	3300006237	Miscanthus Rhizosphere	MAEPSRKSVGVYDRPHPLRTRKVLIVIVAMVVAVAYALWAHFA*
Ga0097621_1010934832	3300006237	Miscanthus Rhizosphere	MTAPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVGIVYAVWWYVA*
Ga0079222_100370082	3300006755	Agricultural Soil	MPRTVGVYDRPHPLRTRKVLVPLAVAAVAGLAYALWFYLS*
Ga0105248_124621662	3300009177	Switchgrass Rhizosphere	MTTPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVAIVYAVWWYVA*
Ga0105237_108050032	3300009545	Corn Rhizosphere	LNPRPEFMSDPGKPTTAASRNSVGVYDRPHPLRTRKVLVPVVIFVLMALVYGLYFLLR*
Ga0134128_100843521	3300010373	Terrestrial Soil	MERDRSRNAVGVYDRPPAWRTRKVLVPVAIFVVVAVAYALYFLR*
Ga0134122_102175232	3300010400	Terrestrial Soil	MTAPSRNTVGVYDRPHPLRTRKVLVPAVVAVGVAILYGLWAYFA*
Ga0134121_117924321	3300010401	Terrestrial Soil	MTTPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVAIVYAVWWYLA*
Ga0150985_1102285332	3300012212	Avena Fatua Rhizosphere	MTEPSRKSVGVYDRPHPLRTRKVLIPVIVALVVAAAYALWAYLA*
Ga0150985_1145305052	3300012212	Avena Fatua Rhizosphere	MTTPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVAIAYAVWWYVA*
Ga0150985_1197369322	3300012212	Avena Fatua Rhizosphere	MTVPSRSTVGVYDRPHWLRTRKVVAPLVVAAIVAVGYAVWWYVA*
Ga0150985_1216375572	3300012212	Avena Fatua Rhizosphere	MPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVAIAYAVWWYVR*
Ga0150984_1014488991	3300012469	Avena Fatua Rhizosphere	MTEPSRKSVGVYDRPHPLRTRKVLIPVIVAIVVTAA
Ga0150984_1045638112	3300012469	Avena Fatua Rhizosphere	MTVPSRSTVGVYDRPHWLRTRKVVAPLLVAGIVAVGYAVWWYVA*
Ga0150984_1124871391	3300012469	Avena Fatua Rhizosphere	MPEPSRKSVGVYDRPHPLRTRKVLLPVVIAIVVAAVYAMWAYLT*
Ga0150984_1208143132	3300012469	Avena Fatua Rhizosphere	MPTPSRNTVGVYDRPHPLRTRKVLVPVLIAVVVAIAYAVWWYVA*
Ga0157301_100991191	3300012911	Soil	MTSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYA
Ga0164298_116450471	3300012955	Soil	VYDRPHPFRTRKVFVPVLVAVVVAIAYAIWWYVS*
Ga0164303_106195592	3300012957	Soil	MAPPSRSAVGVYERPHPLRTRKVLIPALVAIVTAMGYGAWFYFR*
Ga0164304_100832372	3300012986	Soil	MAPPSRSAVVVYERPHPLRTRKVLIPALVAIVTAMGYGAWFYFR*
Ga0164306_103330442	3300012988	Soil	MARPSRSAVGVYERPHPLRTRKVLIPALVAIVTAMGYGAWFYFR*
Ga0164305_110389171	3300012989	Soil	LRAPTMNDRPSGRSRNAVGVYERPHPLRTRKVLVPVVIFVLMALVYGLYFLLR*
Ga0164305_115011412	3300012989	Soil	MTSPSRNTVGVYDRPHPLRTRKVIVPVLGAVVVTIGYAVFFYLR*
Ga0157373_100087394	3300013100	Corn Rhizosphere	MNDRPSGLSRNAVGVYERPHPLRTRKVLVPVVIFVLMALVYGLYFLLR*
Ga0157371_107487362	3300013102	Corn Rhizosphere	MERDRSRNAVGVYDRPPAWRTRKVLVPVAIFVVVAVAYALYFLL*
Ga0157370_100778903	3300013104	Corn Rhizosphere	VPGGTVGVYDRPHPLRTRKVLVPAAIAVVVALGYAGWFYLR*
Ga0157370_101409221	3300013104	Corn Rhizosphere	HSYLRAPTMNDRPSGRSRNAVGVYERPHPLRTRKVLVPVVIFVLMALVYGLYFLLR*
Ga0157370_103636742	3300013104	Corn Rhizosphere	MDQGRSRNAVGVYDRPPAWRTRKVLVPVAIFVVVAIAYTLYFLL*
Ga0157369_100400944	3300013105	Corn Rhizosphere	MTMPSRSSVGVYDRPHPLRTRKVVVPVLIAVVVAAAYAMWWYVG*
Ga0157369_111414722	3300013105	Corn Rhizosphere	MNDRPSGRSRNAVGVYERPHPLLTRKVLVPVVIFVLMALVYGLYFLLR*
Ga0157372_101941122	3300013307	Corn Rhizosphere	MPPPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVMIGYALYFLLR*
Ga0157372_103502341	3300013307	Corn Rhizosphere	NAVGVYDRPPAWRTRKVLVPVAIFVAVAVAYALYFLR*
Ga0120127_100271292	3300013503	Permafrost	MSLPSRSAVGVYDRPHPLRTRKVLIPALVAIVTAMGYGAWFYFR*
Ga0182008_101026851	3300014497	Rhizosphere	SIMDQGRSRNAVGVYDRPPAWRTRKVLVPVAIFVVVAIAYTLYFLL*
Ga0182008_102604662	3300014497	Rhizosphere	MESSMNAPSRKSVGIYDRPHPLRTRKVLVPVVIFVLMALVYGLYFLLR*
Ga0173483_101571972	3300015077	Soil	MTSPSRNTVGVYDQPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR*
Ga0173480_103791541	3300015200	Soil	SARRRARTARPEETPMTSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR*
Ga0132258_111916782	3300015371	Arabidopsis Rhizosphere	MSEGSRKAVGVYDRPHPLRTRKVLIPALVAIAVAVAYAVFAYFS*
Ga0132257_1000355915	3300015373	Arabidopsis Rhizosphere	MPRTVGIYDRPHPLRTRKALVSLAVAAVVGLGYALWFFLR*
Ga0197907_110013152	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MNDRPSGRSRNAVGVYERPHPLRTRKVLVPVVIFVLMALVYGLYFLLR
Ga0206356_110057262	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSDPGKPTTAASRNSVGVYDRPHPLRTRKVLVPTAIAVVVGIGYALWFYLR
Ga0206356_115396232	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MDQGRSRNAVGVYDRPPAWRTRKVLVPVAIFVVVAVAYALYFLL
Ga0206351_107784542	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MNDRPSGLSRNAVGVYERPHPLRTRKVLVPVVIFVLMALVYGLYFLLR
Ga0206354_103964212	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MNDRPSGRSRNAVGVYERPHPLRTRKVLVPVVIFVLMALVYGLYFLMR
Ga0206353_101097562	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MERDRSRNAVGVYDRPPAWRTRKVLVPVAIFVVVAVAYALYFLR
Ga0206353_116317682	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MPGGTVGVYDRPHPLRTRKVLVPAAIAVVVALGYAGWFYLR
Ga0182009_102379712	3300021445	Soil	MNAPSRKSVGIYDRPHPLRTRKVLIPVLVAVAVSAVYATWWWLAR
Ga0207656_100245142	3300025321	Corn Rhizosphere	MPPPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVIIGYALYFLLR
Ga0207692_111992721	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RCHSYLRAPTMNDRPSGRSRNAVGVYERPHPLRTRKVLVPVVIFVLMALVYGLYFLLR
Ga0207680_102431772	3300025903	Switchgrass Rhizosphere	MAEPSRKSVGVYDRPHPLRTRKVLIPVIVAIVVAVAYALWAHFA
Ga0207680_103417842	3300025903	Switchgrass Rhizosphere	MTMPSRSTVGVYDRPHPLRTRKVMVPVIVAIVVTIAYAIWWYVA
Ga0207680_103882601	3300025903	Switchgrass Rhizosphere	EGTPMTSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR
Ga0207654_105464602	3300025911	Corn Rhizosphere	MPRTVGVYDRPHPLRTRKVLVPLAVAAVAGLAYALWFYLR
Ga0207649_103463222	3300025920	Corn Rhizosphere	MPSRSSVGVYDRPHPLRTRKVVVPVLIAVVVAVAYAIWWYVG
Ga0207681_108505212	3300025923	Switchgrass Rhizosphere	MAEPSRKSVGVYDRPHPLRTRKVLIPVLVALVVAAAYALWAYLA
Ga0207650_101048592	3300025925	Switchgrass Rhizosphere	MPPPQSRNTVGVYDRPHPLRTRKVLVPVLMAVVVVIAYALYFMLR
Ga0207701_101540752	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPSRKSVGVYDQPHPLRTRKVLIPVIVAIVVAVAYALWAHFA
Ga0207644_103121982	3300025931	Switchgrass Rhizosphere	MTSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTI
Ga0207644_117090551	3300025931	Switchgrass Rhizosphere	MTTPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVAIVYAVWWYLA
Ga0207690_103103762	3300025932	Corn Rhizosphere	MPSRSSVGVYDRPHPLRTRKVVVPVLIAVVVAAAYAMWWYVG
Ga0207706_103350362	3300025933	Corn Rhizosphere	MTGGPRKAVGVYDRPHPLRTRKVLVPVVIFVLMALVYGLYFLLR
Ga0207706_106717852	3300025933	Corn Rhizosphere	MAEPSRKSVGVYDRPHPLRTRKVLIPVIVAIVVAAAYALWAYLA
Ga0207711_105443301	3300025941	Switchgrass Rhizosphere	MTSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIG
Ga0207689_102105951	3300025942	Miscanthus Rhizosphere	MPPPSRNTVGVYDRPHPLRTRKVLLPVLVAVVVIIGYALYFLLR
Ga0207661_119011692	3300025944	Corn Rhizosphere	GRRFSSIMDQGRSRNAVGVYDRPPAWRTRKVLVPVAIFAVVAIAYTLYFLL
Ga0207679_104243202	3300025945	Corn Rhizosphere	SRVRARQVGPSMTMPSRSSVGVYDRPHPLRTRKVVVPVLIAVVVAAAYAMWWYVG
Ga0207667_118622851	3300025949	Corn Rhizosphere	APRPEFMSDPGKPTTAASRNSVGVYDRPHPLRTRKVLVPTAIAVVVGIGYALWFYLR
Ga0207702_101519243	3300026078	Corn Rhizosphere	MPSRSSVGVYDRPHPLRTRKVVVPVLIAAVVAAAYAIGWYVG
Ga0207648_104926741	3300026089	Miscanthus Rhizosphere	DPQPRRVSSMAEPSRKSVGVYDQPHPLRTRKVLIPVIVAIVVAVAYALWAHFA
Ga0207676_109190692	3300026095	Switchgrass Rhizosphere	VGVYDRPHPLRTRKVLIPVIVAIVVAVAYALWAHFA
Ga0207674_114481822	3300026116	Corn Rhizosphere	VDQGRSRNAVGVYDRPPAWRTRKVLVPLAIFVVVAIAYTLYFLL
Ga0209984_10501812	3300027424	Arabidopsis Thaliana Rhizosphere	MNAPSRKSVGIYDRPHPLRTRKVLIPALVAVAVSAVYAAWWWFAR
Ga0209177_101703301	3300027775	Agricultural Soil	MPRTVGVYDRPHPLRTRKVLVPLAVAAVAGLAYAL
Ga0268266_115661342	3300028379	Switchgrass Rhizosphere	MTSPSRNTVGVYDRPHPLGTRKVMVPVLVAVVVTIGYAVFFYLR
Ga0247828_101566291	3300028587	Soil	APTARPEEIPMTSPSRNTVGVYDRPHPLRTRKVMVPVLVAVVVTIGYAVFFYLR
Ga0247820_105654031	3300028597	Soil	MPSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYA
Ga0247827_112599582	3300028889	Soil	MPSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR
Ga0308189_101777592	3300031058	Soil	MTPPSRNTVGVYDRPHPWRTRKVLVPVVVAIVVAIGYALYFYLR
Ga0310813_105490581	3300031716	Soil	EAMPPPSRNTVGVYDRPHPLRTRKVLVPVLVAVVVIIGYALSFLLR
Ga0310813_108059111	3300031716	Soil	MDQGRSRNAVGVYDRPPAWRTRKVLVPVAIFVVVAIAYTLYFLL
Ga0307413_118898242	3300031824	Rhizosphere	MAPPSRNSVGVYDRPSPWRTRKVLLPAIVAVVVGIAYALWAYFT
Ga0310900_104444322	3300031908	Soil	MTSPSRNTVGVYDRPHPLRTRKVVVPVLVAVVVTIGYAVFFYLR
Ga0308175_1002678142	3300031938	Soil	MNDHRNRRSRNAVGVYDRPHPLRTRKVLVPVVIFVLMALVYGLYFLLR
Ga0308175_1003632232	3300031938	Soil	TPTRSSVGVYDRPHPLRTRKVLVPVAIVVAIAIAYAIYFLLR
Ga0308175_1005004322	3300031938	Soil	MNDRRNGSSRNAVGIYDRPHPLRTRKVLVPVGIFVLMALVYGLYFLLR
Ga0308175_1005323002	3300031938	Soil	MNDRRNGRSRNAVGVYDRPHPLRTRRVLVPVVIFVLIAIVYALYFLLR
Ga0308175_1011758672	3300031938	Soil	VNDTRNGRARGTVGVYNRPHPLRTRKVLVPAVIFVLIAIAYALYFLLR
Ga0308174_100467044	3300031939	Soil	MTTPSRNTVGVYDRPHPLRTRKVMVPVVIAVIVAVAYAIWWYVA
Ga0310884_104946501	3300031944	Soil	ARPEETPMTSPSRNTVGVYDRPHPLRTRKVIVPVLVAVVVTIGYAVFFYLR
Ga0308176_104749131	3300031996	Soil	GVYNRPHPLRTRKVLVPAVIFVLIAIAYALYFLLR
Ga0308176_124709632	3300031996	Soil	VNDTGNGRSRGTVGVYDRPHPLRTRKVLVPAVIFVLIAIAYVLYFLLR
Ga0310810_107122552	3300033412	Soil	MTMPSRSSVGVYDRPHPLRTRKVVVPVLIAAVVAAAYAIWWYVG
Ga0310811_109067692	3300033475	Soil	VGVYDRPHPLRTRKVLVPVLVAVVVTIGYAVFFYLR
Ga0316620_100749482	3300033480	Soil	MPATRNAVGVYDRPHPLRTRKALVAAAIALVVALGYGLWFALR
Ga0316624_108235202	3300033486	Soil	AMPATRNAVGVYDRPHPLRTRKALVAAAIALVVALGYGLWFALR
Ga0316628_1001702271	3300033513	Soil	MTSSRNAVGVYDRPHPLRTRKALVAAGISLVVAAGYAAWFYFR