Metagenome Family F057354

Overview

Basic Information

• Family ID: F057354
• Family Type: Metagenome
• Number of Sequences: 136
• Average Sequence Length: 43 residues
• Representative Sequence: MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRDDIYQQPNPSY
• Number of Associated Samples: 100
• Number of Associated Scaffolds: 136

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Viruses
• % of genes with valid RBS motifs: 88.97 %
• % of genes near scaffold ends (potentially truncated): 99.26 %
• % of genes from short scaffolds (< 2000 bps): 90.44 %
• Associated GOLD sequencing projects: 95
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Duplodnaviria (96.324 % of family members)
• NCBI Taxonomy ID: 2731341
• Taxonomy: All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (29.412 % of family members)
• Environment Ontology (ENVO): Unclassified (69.853 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (58.088 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 4.29%
  β-sheet: 8.57%
  Coil/Unstructured: 87.14%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF05065	Phage_capsid	1.47
PF03354	TerL_ATPase	0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	1.47
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.74

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.06 %
Unclassified	root	N/A	2.94 %

Level 2

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	97.06 %
Unclassified	root	N/A	2.94 %

Level 3

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	96.32 %
Unclassified	root	N/A	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Level 4

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	96.32 %
Unclassified	root	N/A	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Level 5

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	96.32 %
Unclassified	root	N/A	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Level 6

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	96.32 %
Unclassified	root	N/A	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Level 7

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	96.32 %
Unclassified	root	N/A	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Level 8

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	96.32 %
Unclassified	root	N/A	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002408|B570J29032_108950761	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	549
3300002408|B570J29032_109805141	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1396
3300002408|B570J29032_109928569	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2961
3300003429|JGI25914J50564_10057945	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1026
3300005581|Ga0049081_10055420	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1498
3300005805|Ga0079957_1035722	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3224
3300006484|Ga0070744_10223438	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	534
3300006803|Ga0075467_10632827	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	546
3300006805|Ga0075464_10332154	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	918
3300006805|Ga0075464_10666270	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	642
3300006805|Ga0075464_10728968	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	614
3300006805|Ga0075464_10851895	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	568
3300006917|Ga0075472_10671241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	521
3300007670|Ga0102862_1055951	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	962
3300007708|Ga0102859_1265354	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	516
3300008450|Ga0114880_1242205	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	569
3300009068|Ga0114973_10303235	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	851
3300009085|Ga0105103_10746343	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	565
3300009152|Ga0114980_10379623	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	813
3300009152|Ga0114980_10506892	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	687
3300009159|Ga0114978_10403991	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	817
3300009160|Ga0114981_10173960	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1184
3300009161|Ga0114966_10079284	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2247
3300009169|Ga0105097_10848360	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	522
3300009180|Ga0114979_10259700	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1039
3300009184|Ga0114976_10587380	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	566
3300010885|Ga0133913_12030855	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1427
3300011010|Ga0139557_1051088	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	703
3300012017|Ga0153801_1081481	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	569
3300013004|Ga0164293_11004896	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	520
3300013005|Ga0164292_10743155	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	623
(restricted) 3300013122|Ga0172374_1250824	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	633
3300013372|Ga0177922_10494240	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	845
3300014811|Ga0119960_1077010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	592
3300017701|Ga0181364_1055525	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	617
3300017716|Ga0181350_1088267	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	776
3300017716|Ga0181350_1137431	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577
3300017722|Ga0181347_1112603	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	767
3300017723|Ga0181362_1097034	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	587
3300017736|Ga0181365_1012846	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2091
3300017736|Ga0181365_1027873	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1426
3300017736|Ga0181365_1032182	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1323
3300017736|Ga0181365_1035512	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1257
3300017736|Ga0181365_1075510	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	828
3300017754|Ga0181344_1076300	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	985
3300017754|Ga0181344_1175099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	607
3300017761|Ga0181356_1056944	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1336
3300017761|Ga0181356_1234482	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	529
3300017766|Ga0181343_1183185	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577
3300017766|Ga0181343_1214546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	525
3300017766|Ga0181343_1227885	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	506
3300017774|Ga0181358_1118179	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	934
3300017777|Ga0181357_1100553	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1096
3300017777|Ga0181357_1143227	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	885
3300017778|Ga0181349_1089332	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1164
3300017778|Ga0181349_1116217	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	989
3300017780|Ga0181346_1121086	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1002
3300017780|Ga0181346_1127053	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	972
3300017780|Ga0181346_1300636	Not Available	544
3300017784|Ga0181348_1170760	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	799
3300017784|Ga0181348_1305430	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	531
3300017785|Ga0181355_1012553	Not Available	3722
3300017785|Ga0181355_1263521	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	657
3300017785|Ga0181355_1334815	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	560
3300017785|Ga0181355_1394113	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	502
3300019784|Ga0181359_1058191	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1483
3300019784|Ga0181359_1204091	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634
3300019784|Ga0181359_1205823	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	630
3300020159|Ga0211734_11320708	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	653
3300020160|Ga0211733_10940162	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	628
3300020161|Ga0211726_10867778	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	521
3300020506|Ga0208091_1034272	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	562
3300020536|Ga0207939_1003360	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3220
3300020541|Ga0208359_1021294	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1053
3300020550|Ga0208600_1026445	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	915
3300020553|Ga0208855_1037611	Not Available	657
3300020565|Ga0208718_1013944	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1643
3300021962|Ga0222713_10291265	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1045
3300021962|Ga0222713_10390125	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	860
3300021963|Ga0222712_10112843	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1882
3300022179|Ga0181353_1102606	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	702
3300022179|Ga0181353_1112887	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	657
3300023184|Ga0214919_10372825	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	940
3300025896|Ga0208916_10139925	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1037
3300025896|Ga0208916_10171569	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	935
3300025896|Ga0208916_10346250	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	648
3300025896|Ga0208916_10428942	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	576
3300027140|Ga0255080_1025439	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	961
3300027142|Ga0255065_1025864	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1130
3300027214|Ga0208306_1048587	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	743
3300027721|Ga0209492_1067566	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1262
3300027764|Ga0209134_10163279	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	767
3300027782|Ga0209500_10117853	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1290
3300027798|Ga0209353_10027898	All Organisms → Viruses → Predicted Viral	2633
3300027808|Ga0209354_10069434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1428
3300027900|Ga0209253_10741627	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	704
3300027973|Ga0209298_10129195	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1078
3300027974|Ga0209299_1177313	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	790
(restricted) 3300027977|Ga0247834_1049267	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2286
3300028025|Ga0247723_1155282	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	533
(restricted) 3300028581|Ga0247840_10022787	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6240
3300031758|Ga0315907_10053604	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3539
3300031784|Ga0315899_11046840	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	721
3300031787|Ga0315900_10932611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	579
3300031857|Ga0315909_10481526	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	863
3300031951|Ga0315904_10584844	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	965
3300031951|Ga0315904_10900228	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	714
3300032050|Ga0315906_10194230	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1917
3300032050|Ga0315906_11027525	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	617
3300032177|Ga0315276_10555996	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1234
3300033979|Ga0334978_0329459	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	728
3300033995|Ga0335003_0390487	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	599
3300033996|Ga0334979_0235521	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1065
3300034012|Ga0334986_0512247	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	587
3300034061|Ga0334987_0784814	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	533
3300034062|Ga0334995_0013082	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7688
3300034073|Ga0310130_0245847	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	563
3300034092|Ga0335010_0255302	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1032
3300034092|Ga0335010_0390127	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	765
3300034095|Ga0335022_0083293	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2061
3300034101|Ga0335027_0021903	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5412
3300034103|Ga0335030_0424212	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	857
3300034104|Ga0335031_0181218	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1438
3300034104|Ga0335031_0585967	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	661
3300034105|Ga0335035_0527823	Not Available	640
3300034106|Ga0335036_0255637	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1184
3300034112|Ga0335066_0403804	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	745
3300034116|Ga0335068_0562564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	519
3300034117|Ga0335033_0552535	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	543
3300034118|Ga0335053_0288551	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1036
3300034118|Ga0335053_0607676	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	629
3300034122|Ga0335060_0400610	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	726
3300034122|Ga0335060_0688636	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505
3300034166|Ga0335016_0557703	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	633
3300034200|Ga0335065_0189003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1351
3300034283|Ga0335007_0811996	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	506

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.53%
Terrestrial	Environmental → Terrestrial	1.47%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	86.03%
Marine	Environmental → Aquatic → Marine	12.50%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.47%

Type

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	37.50%
Lake	Environmental → Aquatic → Freshwater → Lake	37.50%
Coastal	Environmental → Aquatic → Marine → Coastal	7.35%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.62%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.21%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.21%
River	Environmental → Aquatic → Freshwater → River	1.47%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.47%
Ice	Environmental → Aquatic → Freshwater → Ice	0.74%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	36.76%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	33.82%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.35%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.62%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.21%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.21%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.47%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.47%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.74%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.74%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	29.41%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	22.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.82%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.35%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	5.88%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.68%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.68%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.21%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.21%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.21%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.47%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.74%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.74%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.74%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.74%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.74%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.74%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.74%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.74%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.74%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.74%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental
3300010885	northern Canada Lakes Co-assembly	Environmental
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental
3300013122 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10.3m	Environmental
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental
3300014811	Aquatic viral communities from ballast water - Michigan State University - AB_ballast water	Environmental
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental
3300020536	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)	Environmental
3300020541	Freshwater microbial communities from Lake Mendota, WI - 26AUG2009 deep hole epilimnion (SPAdes)	Environmental
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental
3300020553	Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnion (SPAdes)	Environmental
3300020565	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns (SPAdes)	Environmental
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental
3300027140	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepC_8h	Environmental
3300027142	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h	Environmental
3300027214	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02 (SPAdes)	Environmental
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental
3300027977 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12m	Environmental
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental
3300028581 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_17m	Environmental
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental
3300034166	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079	Environmental
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1089507612	3300002408	Freshwater	MSVWTPDWKLIVGGVDYTDIAISDIQHQAGRDDIYSQPN
B570J29032_1098051412	3300002408	Freshwater	MTVFTPDWKLTVGGVDYTDITISDVQHAAGRTDIYQQSL
B570J29032_1099285695	3300002408	Freshwater	MSQFTPDWKLTVGGVDYTDITISDVQHQAGRSDIYQQALPSYMQVTLVAL
JGI25914J50564_100579451	3300003429	Freshwater Lake	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSY
Ga0049081_100554201	3300005581	Freshwater Lentic	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRTDIYQQP
Ga0079957_10357221	3300005805	Lake	MTVWTPDWKLTVAGVDYTDIAISDIAHQAGRDDIYTQPNPSYL
Ga0070744_102234382	3300006484	Estuarine	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRSDIYQQPNPSYIQVSF
Ga0075467_106328271	3300006803	Aqueous	MTVWTPDWKLTVAGVDYTDLTISDIIHQAGRDDIYSHPSPSHLQCTIVA
Ga0075464_103321542	3300006805	Aqueous	MTVFTPQYKLTVNGVEYTNVAISDIAHQAGREDIYSQPNPS
Ga0075464_106662701	3300006805	Aqueous	MTVWTPDWKLTVAGVDYTDIAISDIAHQAGRDDIYTQPNPSYLQVQL
Ga0075464_107289682	3300006805	Aqueous	MTAWSPDWKLTVAGVDYTNIAISDIQHQAGRTDIYQQPN
Ga0075464_108518951	3300006805	Aqueous	MSVFTPDWKLTVAGVEYTDITISDITHEAGRDDIYEQPNPSYLQ
Ga0075472_106712413	3300006917	Aqueous	MTVWTPDWKLTVAGTEYTNLTISDITHQAGRDDIYTQPNPS
Ga0102862_10559511	3300007670	Estuarine	MSVFTPDWKLTVAGVEYTDITISDITHAAGRDDIYEQPNPSYLQ
Ga0102859_12653542	3300007708	Estuarine	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRTDIYQQPNPSYL
Ga0114880_12422051	3300008450	Freshwater Lake	MSAFTPDWKLTVGGVDYTDIAISDIQHEAGRTDIYQQPSPSYCSITL
Ga0114973_103032352	3300009068	Freshwater Lake	MTVFNPSWKLTVAGTDYTNIAISDIAHQAGRTDIYSQ
Ga0105103_107463432	3300009085	Freshwater Sediment	MSVWTPDWKLTVGGVDYTDIAISDVQHQSGRDDIYSQP
Ga0114980_103796232	3300009152	Freshwater Lake	MTAWSPEWKLTVAGTNYTNIAISDITHQAGRTDIYTQPSPSYMQVTL
Ga0114980_105068922	3300009152	Freshwater Lake	MTAWSPEWKLTVAGTNYTNIAISDVQHQAGRTDIYSQPSPSYMQITL
Ga0114978_104039911	3300009159	Freshwater Lake	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYMQIELVA
Ga0114981_101739601	3300009160	Freshwater Lake	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYMQIELVALNNFLL*
Ga0114966_100792844	3300009161	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIAHQAGRSDIYQQPNPSYIQINF
Ga0105097_108483601	3300009169	Freshwater Sediment	MTAFTPDWKLTVGGVDYTDITISDVQHAAGRTDIYQQPLPSYIQIT
Ga0114979_102597002	3300009180	Freshwater Lake	MTAFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYMQIELVA
Ga0114976_105873802	3300009184	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRTDIY
Ga0133913_120308551	3300010885	Freshwater Lake	MTVFTPEWKLTVAGTDYTNIAISDVQHQAGRTDIY
Ga0139557_10510882	3300011010	Freshwater	MTFWSPDWKLTVAGVDYTDIAISDIQHQAGRSDIYQQPNPSYIQ
Ga0153801_10814812	3300012017	Freshwater	MTVFTPEWKLTVAGTDYTNIAISDVQHQAGRTDIYSQPS
Ga0164293_110048961	3300013004	Freshwater	MSAFTPDWKLTVGGVDYTDIAISDVQHQSGRTDIYQQALPSYMQISFV
Ga0164292_107431551	3300013005	Freshwater	MTVWTPEWKLTVAGTEYTNLTISDIIHQSGRDDIYTQPNPSYL
(restricted) Ga0172374_12508241	3300013122	Freshwater	MTVFTPDWKLTVGGVDYTDITISDVQHQAGRSDIYQQPL
Ga0177922_104942401	3300013372	Freshwater	MTVFTPDWKLTVGGVDYTDITIADVQHQAGRTDIYQQPLPSYCQVTF
Ga0119960_10770102	3300014811	Aquatic	MTVWTPDWKLTVAGTEYTNLTISDITHQAGRDDIYTQPDRDWE
Ga0181364_10555252	3300017701	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHEAGRTDIYQQ
Ga0181350_10882671	3300017716	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRTDIYQQ
Ga0181350_11374312	3300017716	Freshwater Lake	MTAWSPDWKLTVAGVEYTDIAISDIAHQAGRSDIYQQPNPSYLQV
Ga0181347_11126032	3300017722	Freshwater Lake	MSAWSPDWKLTVAGVDYTDIAISDVQHQAGRDDIYQQPN
Ga0181362_10970341	3300017723	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRTDIYQQPNPS
Ga0181365_10128461	3300017736	Freshwater Lake	MTVWTPDWKLTVAGVDYTDIAISDITHESGRDDIYTQPNPSY
Ga0181365_10278733	3300017736	Freshwater Lake	MTVWTPDWQLSVAGVDYTDIAISNITHQSGRDDIYTQA
Ga0181365_10321822	3300017736	Freshwater Lake	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYMQIELVAL
Ga0181365_10355121	3300017736	Freshwater Lake	MTVWTPDWKLTVAGVDYTDIAISDITHESGRDDIYTQPNPSYLQI
Ga0181365_10755102	3300017736	Freshwater Lake	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYMQIDLF
Ga0181344_10763002	3300017754	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRTDIYQQPNPSYLQITFVALSN
Ga0181344_11750992	3300017754	Freshwater Lake	MTVWTPDWKLTVEGVDYTDIAIADIAHQAGRTDIYSQ
Ga0181356_10569442	3300017761	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHEAGRTDIYQQPN
Ga0181356_12344821	3300017761	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRSDIYQQPNPSYIQVSFV
Ga0181343_11831852	3300017766	Freshwater Lake	MTVFTPEWKLTVAGTDYTNIAISDIQHQAGRTDIY
Ga0181343_12145461	3300017766	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIAHQAGRSDIYQQPNPSYIQV
Ga0181343_12278851	3300017766	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHEAGRTDIYQ
Ga0181358_11181791	3300017774	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIAHQAGRSDIYQQPSPSYIQVIP
Ga0181357_11005532	3300017777	Freshwater Lake	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYIQIELVAL
Ga0181357_11432271	3300017777	Freshwater Lake	MTVWTPDWKLTVAGVDYTDLTISDIIHQAGRDDIYTQPNPSYL
Ga0181349_10893321	3300017778	Freshwater Lake	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPN
Ga0181349_11162172	3300017778	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIAHQAGRSDIYQQPNPSYIQISFVALSGQ
Ga0181346_11210862	3300017780	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHQSGRTDIYQQPN
Ga0181346_11270531	3300017780	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIAHQAGRSDIYQQ
Ga0181346_13006362	3300017780	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISVIQHQAGRTDIYQQ
Ga0181348_11707602	3300017784	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDISHQAGRSDIYQQPNPSYIQ
Ga0181348_13054302	3300017784	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRSDIYQQPNPSYIQVSFLALSGQ
Ga0181355_10125537	3300017785	Freshwater Lake	MSDFTPDWKLTVGGVDYTNIAISDVQHQAGRSDIYQQPLP
Ga0181355_12635211	3300017785	Freshwater Lake	MTAWLPDWKLTVAGVDYTDIAISDIAHQAGRSDIYQQPNPSYIQVNFVA
Ga0181355_13348151	3300017785	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHQSGRTDIYQQPNPSYLQITFVAPYF
Ga0181355_13941132	3300017785	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDVQHQAGRDDIYQQPN
Ga0181359_10581911	3300019784	Freshwater Lake	MTVWTPDWKLTVAGTDYTDIAIADITHQSGRSDIYSQPNPSY
Ga0181359_12040911	3300019784	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHEAGRTDIYQQPNPSY
Ga0181359_12058232	3300019784	Freshwater Lake	MTVWSPDWKLTVAGVDYTDIAISDIQHQSGRTDIYQQP
Ga0211734_113207081	3300020159	Freshwater	MTVFTPEWKLTVAGTEYTDIAISDVQHQAGRTDIYTQPSPSYMQ
Ga0211733_109401621	3300020160	Freshwater	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRTDIYQQPNPSYLQITFV
Ga0211726_108677782	3300020161	Freshwater	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRTDIYQQPNPSYMQINFVAL
Ga0208091_10342721	3300020506	Freshwater	MTVWTPDWKLTVAGVDYTDIAISDIAHQAGRTDIYTQA
Ga0207939_10033601	3300020536	Freshwater	MTVFTPDWKLTVGGVDYTDITISDVQHAAGRTDIYQQSLPSYM
Ga0208359_10212941	3300020541	Freshwater	MSAFTPDWKLTVGGVDYTNIAISDVQHQSGRTDIYEQALPSYCSIT
Ga0208600_10264451	3300020550	Freshwater	MTAWSPDWKLTVAGVDYTDIAISDIQHEAGRTDIYQQPNPSYVQIT
Ga0208855_10376112	3300020553	Freshwater	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQP
Ga0208718_10139443	3300020565	Freshwater	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRDDIYQQPNPSY
Ga0222713_102912651	3300021962	Estuarine Water	MTVFTPDWKLTVGGVDYTDIAISDIQHQAGRTDIYQ
Ga0222713_103901251	3300021962	Estuarine Water	LTVWTPDWKLTVGGVDYTDVAISDIQHQAGRDNIYIQPNPSYVQI
Ga0222712_101128431	3300021963	Estuarine Water	MTVFTPDWKLTVGGVDYTDITISDVQHQAGRTDIYSQPLPSYIQLTLLALN
Ga0181353_11026061	3300022179	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRSDIYQQPNP
Ga0181353_11128871	3300022179	Freshwater Lake	MTVFTPEYQLTVNGVEYTNVAISDIAHQAGREDIYSQPNPSYLQ
Ga0214919_103728252	3300023184	Freshwater	MTVFNPEWKLTVAGTEYTSIAISDIRHKSGRDDIYTQPAPSYLQIS
Ga0208916_101399251	3300025896	Aqueous	MTVFTPDWKLTINAVEYTNVAISDIAHQAGRQDIYSQPN
Ga0208916_101715692	3300025896	Aqueous	MTVWTPDWKLTVAGVDYTDLTISDIIHQAGRDDIYSQPSPS
Ga0208916_103462502	3300025896	Aqueous	MTVWTPDWKLTVAGVDYTDLTISDIIHQAGRDDIYSQPNPSYLQCTIVA
Ga0208916_104289421	3300025896	Aqueous	MTVFNPSWKLTVAGTDYTNIAISDISHQAGRTDIYS
Ga0255080_10254392	3300027140	Freshwater	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYMQIE
Ga0255065_10258641	3300027142	Freshwater	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYMQIELVALNN
Ga0208306_10485871	3300027214	Estuarine	MSVFTPDWKLTVAGVEYTDITISDITHAAGRDDIY
Ga0209492_10675662	3300027721	Freshwater Sediment	MTVFTPDWKLTVGGVDYTDIAISDIQHQAGRDDIYSQPNPSYIQITLVALNN
Ga0209134_101632792	3300027764	Freshwater Lake	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRDDIYQQPNP
Ga0209500_101178531	3300027782	Freshwater Lake	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYM
Ga0209353_100278986	3300027798	Freshwater Lake	MTVWTPDWKLTVAGVDYTDIAISDITHESGRDDIYTQPNPSYLQ
Ga0209354_100694342	3300027808	Freshwater Lake	MTAWTPDWKLTVAGVDYTDLTISDIIHQAGRDDIYSQPNP
Ga0209253_107416272	3300027900	Freshwater Lake Sediment	MTVFTPEWKLTVAGTDYTNIAISDIQHQAGRDDLYTQPSP
Ga0209298_101291951	3300027973	Freshwater Lake	MTVWTPDWKLTVAGVDYTDLTISDIIHQAGRNDIYSQPNPSYLQCTIVAL
Ga0209299_11773131	3300027974	Freshwater Lake	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYIQ
(restricted) Ga0247834_10492671	3300027977	Freshwater	MTVWTPDWKLTVAGVDYTDIAISDITHESGRDDIYTQPNPSYLQIS
Ga0247723_11552822	3300028025	Deep Subsurface Sediment	MTVWTPDWKLTVAGVDYENITIADIAHQAGRDDIY
(restricted) Ga0247840_100227879	3300028581	Freshwater	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRDDIYQQPNPSYLQ
Ga0315907_100536041	3300031758	Freshwater	MTVFTPDWKLTVGGIDYTDITISDVQHQAGRSDIYQQP
Ga0315899_110468402	3300031784	Freshwater	MTVWTPDWKLTVAGVDYTDIAISDIAHQAGRDDIYTQPNPSYLQVEVV
Ga0315900_109326112	3300031787	Freshwater	MSAFTPDWKLTVGGVDYTDITISDVQHQAGRSDIYQQPLP
Ga0315909_104815261	3300031857	Freshwater	LTAWAPDWKLTVGGVDYTDIAISDIQHQAGRDNIYIQPNPSYVQI
Ga0315904_105848442	3300031951	Freshwater	MTVFTPDWKLTVGGVDYTDITISDVQHTAGRSDIYQQPLPSYMQVTL
Ga0315904_109002282	3300031951	Freshwater	MTVFTPDWKLTVGGVDYTDIAISDIQHQAGRTDIYQQP
Ga0315906_101942301	3300032050	Freshwater	MTVFTPDWKLIVGGVDYTDIAISDVQHQSGRTDIYQQALPSYM
Ga0315906_110275251	3300032050	Freshwater	MTVWTPDWKLSVAGVDYENITIADIAHQAGRDDIYTQPNP
Ga0315276_105559962	3300032177	Sediment	MSVFTPDWKLTVAGVEYTDITISDITHEAGRDDIYEQPNPSYLQVEL
Ga0334978_0329459_594_728	3300033979	Freshwater	MSAFTPDWKLTVGGVDYTDIAISDIQHEAGRTDIYQQPSPSYCSI
Ga0335003_0390487_486_599	3300033995	Freshwater	MTVWSPDWKLTVAGVDYTDIAIADIAHQAGRDDIYSQP
Ga0334979_0235521_911_1063	3300033996	Freshwater	MSDFTPDWKLTVGGVDYTNIAISDVQHQAGRSDIYQQSLPSYIQVTLVALN
Ga0334986_0512247_420_587	3300034012	Freshwater	MSDFTPDWKLTVSGVDYTDITISDVQHQAGRSDIYQQSLPSYIQVTLVALNGQTLP
Ga0334987_0784814_382_531	3300034061	Freshwater	MSDFTPDWKLTVGGVDYTNIAISDVQHQAGRSDIYQQPLPSYCQITLVAL
Ga0334995_0013082_3_116	3300034062	Freshwater	MTVWTPDWKLIVDGVDYEDITVSDIAHQAGRDDIYTQP
Ga0310130_0245847_442_561	3300034073	Fracking Water	MSDFTPDWKLTVGGVDYTDIAIADVQHQAGRTDIYQQPLP
Ga0335010_0255302_884_1030	3300034092	Freshwater	MSDFTPDWKLTVGGVDYTNIAISDVQHQAGRSDIYQQSLPSYIQVTLVA
Ga0335010_0390127_2_163	3300034092	Freshwater	MPAFTPDWKLTVGGVDYTNITISDVQHQAGRSDIYQQPLPSYMQITLVALNNQT
Ga0335022_0083293_2_136	3300034095	Freshwater	MTAWSPDWKLTVAGVDYTDIAISDIQHQAGRSDIYQQPNPSYIQV
Ga0335027_0021903_2_145	3300034101	Freshwater	MTVWTPDWKLTVAGVDYTDIAISDIAHQAGRDDIYTQPNPSYLQVALV
Ga0335030_0424212_742_855	3300034103	Freshwater	MSAFTPDWKLTVGGVDYTDIAISDIQHEAGRTDIYQQP
Ga0335031_0181218_1290_1436	3300034104	Freshwater	MTVWTPDWKLTVAGVDYTDIAISDIAHQAGRDDIYTQPNPSYLQVALVA
Ga0335031_0585967_3_113	3300034104	Freshwater	MSQFTPDWKLTVGGVDYTDITISDVQHQAGRSDIYQQ
Ga0335035_0527823_520_639	3300034105	Freshwater	MTVFTPEYQLTVNGVEYTNVAISDIAHQAGREDIYSQPNP
Ga0335036_0255637_1045_1182	3300034106	Freshwater	MTVFTPDWKLTINAVEYTNVAISDIAHQAGREDIYSQPNPSYMRIE
Ga0335066_0403804_622_744	3300034112	Freshwater	MSAWTPDWKLTVGGVDYTDIAISDIQHEAGRTDIYLQPNPS
Ga0335068_0562564_376_519	3300034116	Freshwater	MTVWTPDWKLTVAGVDYTDIAISDIAHQSGRDDIYTQPNPSYLQVQLV
Ga0335033_0552535_398_541	3300034117	Freshwater	MTAWSPDWKLTVAGVDYTDIVISDIQHQAGRTDIYQQPNPSYLQITFV
Ga0335053_0288551_903_1034	3300034118	Freshwater	MTVWNPDWKLTVSGVDYTDIAISDIQHQAGRDDIYSQPNPSYVQ
Ga0335053_0607676_2_115	3300034118	Freshwater	MTVFTPEYQLTVNGVEYTNVAISDIAHQAGREDIYSQP
Ga0335060_0400610_557_724	3300034122	Freshwater	MTVFTPDWKLTVGGVDYTDIAISDVQHQSGRTDIYQQALPSYIQISLVALNNQTLP
Ga0335060_0688636_1_150	3300034122	Freshwater	MTVWTPDWKLTVAGVDYTDIAISDIAHQAGRTDIYTQPNPSYLQVQVVAL
Ga0335016_0557703_3_143	3300034166	Freshwater	MTVFTPDWKLTVGGVDYTDIAISDVQHQSGRTDIYQQALPSYMQISL
Ga0335065_0189003_1237_1350	3300034200	Freshwater	MTVWTPDWKLTVAGVDYTDIAISDIAHQAGRDDIYTQP
Ga0335007_0811996_3_125	3300034283	Freshwater	MTVFTPDWKLTVGGVDYTDITISDVQHAAGRTDIYQQSLPS