Metagenome / Metatranscriptome Family F057033

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057033
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	65 residues
Representative Sequence	MRKQKKFTQQKKFIPRAVRPKEEQAKEHELMAEALAAYQGPITKCPPGSARDRTLSASNRVAKGPSRPS
Number of Associated Samples	77
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.50 %
% of genes near scaffold ends (potentially truncated)	19.12 %
% of genes from short scaffolds (< 2000 bps)	78.68 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.765 % of family members)
Environment Ontology (ENVO)	Unclassified (61.765 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.441 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.53% β-sheet: 0.00% Coil/Unstructured: 82.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF00589	Phage_integrase	19.85
PF00486	Trans_reg_C	3.68
PF13356	Arm-DNA-bind_3	2.94
PF12728	HTH_17	2.21
PF02861	Clp_N	2.21
PF11300	DUF3102	1.47
PF05589	DUF768	1.47
PF11994	DUF3489	0.74
PF01068	DNA_ligase_A_M	0.74
PF08734	GYD	0.74
PF02738	MoCoBD_1	0.74
PF02518	HATPase_c	0.74
PF02565	RecO_C	0.74
PF06689	zf-C4_ClpX	0.74
PF07746	LigA	0.74
PF09361	Phasin_2	0.74
PF01957	NfeD	0.74
PF02560	Cyanate_lyase	0.74
PF13493	DUF4118	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	2.21
COG1381	Recombinational DNA repair protein RecO (RecF pathway)	Replication, recombination and repair [L]	0.74
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.74
COG1513	Cyanate lyase	Inorganic ion transport and metabolism [P]	0.74
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.74
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
cellular organisms	root	All Organisms → cellular organisms	49.26 %
Viruses	superkingdom	All Organisms → Viruses	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.71 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.24 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.21 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.21 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.21 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	0.74 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.21 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.21 %
unclassified Azorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium	0.74 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.21 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.21 %
Azorhizobium sp. 12-66-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 12-66-6	0.74 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1006557	Not Available	2222	Open in IMG/M
3300005332\|Ga0066388_100103322	Not Available	3321	Open in IMG/M
3300005332\|Ga0066388_100117109	All Organisms → cellular organisms → Bacteria	3176	Open in IMG/M
3300005332\|Ga0066388_100342877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2140	Open in IMG/M
3300005332\|Ga0066388_103484402	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300005363\|Ga0008090_10108032	Not Available	875	Open in IMG/M
3300005713\|Ga0066905_100316118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1233	Open in IMG/M
3300005764\|Ga0066903_101259469	Not Available	1378	Open in IMG/M
3300005764\|Ga0066903_101714768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1197	Open in IMG/M
3300005764\|Ga0066903_103213967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300005764\|Ga0066903_105813961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	648	Open in IMG/M
3300005764\|Ga0066903_106105260	Not Available	630	Open in IMG/M
3300005764\|Ga0066903_108617667	Not Available	519	Open in IMG/M
3300006047\|Ga0075024_100262691	Not Available	833	Open in IMG/M
3300006052\|Ga0075029_101168342	Not Available	536	Open in IMG/M
3300006057\|Ga0075026_100543655	Not Available	675	Open in IMG/M
3300006102\|Ga0075015_100716563	Not Available	595	Open in IMG/M
3300010046\|Ga0126384_10980132	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300010046\|Ga0126384_11716128	Not Available	594	Open in IMG/M
3300010048\|Ga0126373_10029376	All Organisms → cellular organisms → Bacteria	4738	Open in IMG/M
3300010048\|Ga0126373_10519537	Not Available	1235	Open in IMG/M
3300010048\|Ga0126373_11957133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300010358\|Ga0126370_10111679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 12-66-6	1917	Open in IMG/M
3300010359\|Ga0126376_11663011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300010360\|Ga0126372_13233753	Not Available	506	Open in IMG/M
3300010361\|Ga0126378_10882098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1002	Open in IMG/M
3300010366\|Ga0126379_13460463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300010376\|Ga0126381_100511469	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300010376\|Ga0126381_101030709	Not Available	1188	Open in IMG/M
3300010376\|Ga0126381_101286970	Not Available	1057	Open in IMG/M
3300010376\|Ga0126381_101522722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	967	Open in IMG/M
3300010398\|Ga0126383_12097748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	652	Open in IMG/M
3300012096\|Ga0137389_11651954	Not Available	537	Open in IMG/M
3300012198\|Ga0137364_10104858	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300012200\|Ga0137382_11210773	Not Available	536	Open in IMG/M
3300012211\|Ga0137377_10202865	Not Available	1904	Open in IMG/M
3300012948\|Ga0126375_10551848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	870	Open in IMG/M
3300016270\|Ga0182036_10175745	Not Available	1548	Open in IMG/M
3300016294\|Ga0182041_10160676	Not Available	1746	Open in IMG/M
3300016294\|Ga0182041_10527517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1028	Open in IMG/M
3300016294\|Ga0182041_11459481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300016294\|Ga0182041_11913211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300016319\|Ga0182033_10852991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	805	Open in IMG/M
3300016341\|Ga0182035_10189544	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300016341\|Ga0182035_10345959	Not Available	1234	Open in IMG/M
3300016341\|Ga0182035_10851190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300016357\|Ga0182032_10744118	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300016357\|Ga0182032_11255740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300016371\|Ga0182034_11027056	Not Available	713	Open in IMG/M
3300016371\|Ga0182034_11229220	Not Available	652	Open in IMG/M
3300016404\|Ga0182037_11553367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	588	Open in IMG/M
3300016404\|Ga0182037_11926000	Not Available	530	Open in IMG/M
3300016422\|Ga0182039_11340655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300016422\|Ga0182039_11571549	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300016422\|Ga0182039_11958562	Not Available	538	Open in IMG/M
3300016445\|Ga0182038_10738067	Not Available	860	Open in IMG/M
3300016445\|Ga0182038_10807679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	822	Open in IMG/M
3300017822\|Ga0187802_10011768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2847	Open in IMG/M
3300017933\|Ga0187801_10113767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1034	Open in IMG/M
3300017943\|Ga0187819_10008322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5819	Open in IMG/M
3300017961\|Ga0187778_10202846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1264	Open in IMG/M
3300017970\|Ga0187783_10029961	All Organisms → cellular organisms → Bacteria → Proteobacteria	4033	Open in IMG/M
3300017970\|Ga0187783_10047155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3183	Open in IMG/M
3300017974\|Ga0187777_10495795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300017999\|Ga0187767_10190697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	641	Open in IMG/M
3300021560\|Ga0126371_10071050	All Organisms → cellular organisms → Bacteria	3386	Open in IMG/M
3300021560\|Ga0126371_11169301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	907	Open in IMG/M
3300021560\|Ga0126371_12573901	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300027703\|Ga0207862_1031004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1606	Open in IMG/M
3300031231\|Ga0170824_100351944	Not Available	1298	Open in IMG/M
3300031231\|Ga0170824_123159839	Not Available	524	Open in IMG/M
3300031543\|Ga0318516_10403848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300031545\|Ga0318541_10020061	Not Available	3187	Open in IMG/M
3300031545\|Ga0318541_10236482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1014	Open in IMG/M
3300031545\|Ga0318541_10381821	Not Available	787	Open in IMG/M
3300031545\|Ga0318541_10580565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300031546\|Ga0318538_10649985	Not Available	572	Open in IMG/M
3300031561\|Ga0318528_10680171	Not Available	551	Open in IMG/M
3300031572\|Ga0318515_10490642	Not Available	656	Open in IMG/M
3300031572\|Ga0318515_10648563	Not Available	560	Open in IMG/M
3300031573\|Ga0310915_10299713	All Organisms → Viruses → Predicted Viral	1136	Open in IMG/M
3300031573\|Ga0310915_10498114	Not Available	866	Open in IMG/M
3300031680\|Ga0318574_10259117	Not Available	1007	Open in IMG/M
3300031681\|Ga0318572_10694467	Not Available	606	Open in IMG/M
3300031708\|Ga0310686_109355053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2181	Open in IMG/M
3300031719\|Ga0306917_11213357	Not Available	585	Open in IMG/M
3300031744\|Ga0306918_10322577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1194	Open in IMG/M
3300031744\|Ga0306918_10531922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300031769\|Ga0318526_10457060	Not Available	522	Open in IMG/M
3300031770\|Ga0318521_10898200	Not Available	541	Open in IMG/M
3300031781\|Ga0318547_11033397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300031833\|Ga0310917_10675010	Not Available	700	Open in IMG/M
3300031879\|Ga0306919_10663004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300031879\|Ga0306919_10975608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	648	Open in IMG/M
3300031879\|Ga0306919_11119493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300031890\|Ga0306925_10956724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300031890\|Ga0306925_12262811	Not Available	503	Open in IMG/M
3300031897\|Ga0318520_10333698	Not Available	918	Open in IMG/M
3300031910\|Ga0306923_10404150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1554	Open in IMG/M
3300031910\|Ga0306923_10550623	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300031912\|Ga0306921_10181897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2464	Open in IMG/M
3300031912\|Ga0306921_12377621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	553	Open in IMG/M
3300031941\|Ga0310912_10751792	Not Available	754	Open in IMG/M
3300031942\|Ga0310916_10106786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2257	Open in IMG/M
3300031942\|Ga0310916_10152530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1907	Open in IMG/M
3300031945\|Ga0310913_11103752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300031946\|Ga0310910_10896321	Not Available	696	Open in IMG/M
3300031947\|Ga0310909_10389754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300031954\|Ga0306926_10022932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7222	Open in IMG/M
3300031954\|Ga0306926_10277036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2077	Open in IMG/M
3300031954\|Ga0306926_11082599	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300032001\|Ga0306922_12023461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300032025\|Ga0318507_10433721	Not Available	572	Open in IMG/M
3300032035\|Ga0310911_10578350	Not Available	651	Open in IMG/M
3300032055\|Ga0318575_10330754	Not Available	772	Open in IMG/M
3300032076\|Ga0306924_11674893	Not Available	668	Open in IMG/M
3300032076\|Ga0306924_12401574	Not Available	532	Open in IMG/M
3300032261\|Ga0306920_100571059	Not Available	1675	Open in IMG/M
3300032261\|Ga0306920_101304667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1044	Open in IMG/M
3300032261\|Ga0306920_101763306	Not Available	875	Open in IMG/M
3300032261\|Ga0306920_101943475	Not Available	826	Open in IMG/M
3300032261\|Ga0306920_102754745	Not Available	670	Open in IMG/M
3300033289\|Ga0310914_11873076	Not Available	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.85%
Aquatic	Environmental → Aquatic	5.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.85%
Sediment	Environmental → Aquatic → Sediment	2.94%
Freshwater	Environmental → Aquatic → Freshwater	2.21%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.35%
Loam	Environmental → Terrestrial → Soil → Loam	8.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.21%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.21%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10065572	3300000655	Forest Soil	MLKGKKYTHYTPRADRPKDWQAKAREHMAEALAAYQGPITKCPPDSSRHRALSASSRVAKGPSRLS*
Ga0066388_1001033221	3300005332	Tropical Forest Soil	MRKQKKFTQQKKFMPRAVRPKEEQAKERERMAEALAAYQGPVTKCPQPGVRGHTLSASARVAKLRPPS*
Ga0066388_1001171092	3300005332	Tropical Forest Soil	MRKWKTFTQPKKYTSKADRPKDWQAKERERMAEALAAYEGPITKCPPGSARDRALSASNRVAKGPPRRL*
Ga0066388_1003428773	3300005332	Tropical Forest Soil	MRKQKKFTQQKKFIPRAIRPKDEQAKERMAEALAAYHGPITKCPQAGVRDHTLSASARVAKSRPPS*
Ga0066388_1034844021	3300005332	Tropical Forest Soil	MLKRKKFTHWMKFTPRADRPKEVRATERDRMADALAAYHGPITKCPSGSARDSTLSASNRLAKRQPRPS*
Ga0008090_101080321	3300005363	Tropical Rainforest Soil	MQRFDCDSVAGDAMLKGKKYTHYTPRADRPKDWQAKAREHMAEALAAYQGPITKCPPDSSRHRALSASSRVAKGPSRLS*
Ga0066905_1003161181	3300005713	Tropical Forest Soil	KKFTQRKKFITRTDRKKEQAKERERMAEALAAYQGPITKYPQAGVRDRTLSASARVAKSRPPS*
Ga0066903_1012594691	3300005764	Tropical Forest Soil	MRKRKKSTQQKKFLPRPNSRPSDARAKERERMAEALAAYHGPITKCPPGSDKDRALSASNRLAKGPSRPS*
Ga0066903_1017147683	3300005764	Tropical Forest Soil	MLRGKKYTHYTPRADRPKDWQAKARERMAEALAAYQGPVTKCPAESAHDKALSASSRVAKRPPRSS*
Ga0066903_1032139672	3300005764	Tropical Forest Soil	MSGDVRRWTPMRKWFTQWKKYTPRADKPKDERAKERDRMAEALAAYQGPITKCPPGSARDKALSASSRVAKGPPRPS*
Ga0066903_1058139612	3300005764	Tropical Forest Soil	MKRKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSGRAKRPSQPS*
Ga0066903_1061052602	3300005764	Tropical Forest Soil	MRKQKKLTQRKKYTPKVDWPKDWQAKERERMAEALAAYQGPITKCPPGSARDRALSASNRVAKGPSRPS*
Ga0066903_1086176671	3300005764	Tropical Forest Soil	MLKEKKFTHWMKFTPMADRPKKERAKERMAEALAVYQGPITKCPPGSARDKALSASSRVAKGPPRPS
Ga0075024_1002626911	3300006047	Watersheds	MMKRKKLTQQKKFFTSRADRPKEERAKERERMAEALAAYQGPITKCPPGSVRALSASDRAAKRPSRSS*
Ga0075029_1011683422	3300006052	Watersheds	MRKPKKYEKFKPRAATPKDEQAKERERMAEALAAYQGPITKCRPGSVQDPALSASTRVAKRPSRHS*
Ga0075026_1005436552	3300006057	Watersheds	MQRLIAIQWPQGDAMLKRKKFTQRKRFMPRADRPMEEQAKDRERMAEALAVYQGPITKCPPASARVAKRLPRPS*
Ga0075015_1007165631	3300006102	Watersheds	MRKRTKFTKWNKFRPRAARPKDERAKERERMAEALAAYQGPITKCPPGSVQHPALSASARVAKQPSRRS*
Ga0126384_109801322	3300010046	Tropical Forest Soil	MAAGGCAMKRKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSGGAKRPSQPF*
Ga0126384_117161282	3300010046	Tropical Forest Soil	MPGAAMLKRKKFTQRIELRAKRQKEEQAKERERMAEALAAYQGPVTKCPQPGVRGHTLSASARVAKSRPPS*
Ga0126373_100293765	3300010048	Tropical Forest Soil	MRKQKKFTQQKKFIPRAIRPKDEQAKERMAEALAAYHGPITKCPQAGVRVAKSRPPS*
Ga0126373_105195371	3300010048	Tropical Forest Soil	MGKKYTHYTPRADRPKDWQAKAREHMAEALAAYQGPITKCPPDSSRHRALSASSRAAKGPLRLS*
Ga0126373_119571331	3300010048	Tropical Forest Soil	MQKQKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSARDRALSASNQ
Ga0126370_101116794	3300010358	Tropical Forest Soil	MQRFDCDSVAGDAMLKGKKYTHYTPRADRPKDWQAKAREHMAEALAAYQGPITKCPLDSSRHRALSASSRAAKGPSRLS*
Ga0126376_116630112	3300010359	Tropical Forest Soil	MQDAIKWPQGDAMLKRKKFTHWMKFTPRADRPKEDRAMERDRMADALAAYQGPITKCPSGSARDS
Ga0126372_132337532	3300010360	Tropical Forest Soil	MQDAIQWPQGDAMLKRKKFTHWMKFTPRADRPKEVRATERDRMADALAAYHGPITKCPSGSARDSTLSASNRLAKRQPRPS*
Ga0126378_108820982	3300010361	Tropical Forest Soil	MRKQKKFTQQKKFIPRAIRPKDEQAKERMAEALAAYQGAITKCPPGSARDRALPASNRVAKGPSRPPSS*
Ga0126379_134604632	3300010366	Tropical Forest Soil	MAAGGCAMKRKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSGRAKRPSQPS*
Ga0126381_1005114692	3300010376	Tropical Forest Soil	MQRFDCDSVAGDAMLKGKKYTHYTPRADRPKDWQAKAREHMAEALAAYQGPITKCPPDSSRHRALSASSRAAKGPSRLS*
Ga0126381_1010307092	3300010376	Tropical Forest Soil	MRKRKKFTPRADRPKEERAKERERMAEALAAYQGPITKCPPGSVQHRASNRLAKRPSRPS
Ga0126381_1012869701	3300010376	Tropical Forest Soil	MPKGKKFTQPKKFTPRADRPKEEQAKERERMAEALAAYQGPITKCPSGSARDRALSASNRLAKGPSRPS*
Ga0126381_1015227221	3300010376	Tropical Forest Soil	MLKGKKYTHYAPRADRPKDWQAKARERMAEALAAYQGPVTKCPAGDAHDKALSASSRVAKRPPRSS*
Ga0126383_120977482	3300010398	Tropical Forest Soil	MAAGGCAMKRKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSGRVKRPSQPS*
Ga0137389_116519542	3300012096	Vadose Zone Soil	MRKRKKFTQRMKFTPRADRPKEERAKERERMAEALAAYQGPITKCPPGSIRALSASGRVAKRPSRSS*
Ga0137364_101048582	3300012198	Vadose Zone Soil	MQRLIAIQWPQGDAMLKRKKSTQRKRFMPRADRPMEEQAKDRERMAEALAVYQGPITKCPPASARVAKRLPRPS*
Ga0137382_112107731	3300012200	Vadose Zone Soil	MLKGKKFTQRKKFAPRADRPKEERAKERERMAEALAAYQGPITKCPSGSVRALSASGRVAKRPSRPS*
Ga0137377_102028651	3300012211	Vadose Zone Soil	MQRLIAIQWPQWDAMLKRKKSTQRKRFMPRADRPMEEQAKDRERMAEALAVYQGPITKWPAGRDRALSASNRLAKRPSRPS*
Ga0126375_105518482	3300012948	Tropical Forest Soil	MKRKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSGRVKRPSQPS*
Ga0182036_101757451	3300016270	Soil	MMKRKKFTQQKKFVAPRADRPKEERAKERERMAEALAAYQGPIIKCPPPPGRVAKRPSRP
Ga0182041_101606763	3300016294	Soil	MRKRKKSTQQRKFIPRPDRPKEARAKERERMTEALAAYQGPITKCPPGSDKDRALSASNRLAKGPSRPS
Ga0182041_105275172	3300016294	Soil	MRKQKKSTTQQKKVIPMAVRPKDEQAKERMAEALAAYRGAITKCPPGSLKDRALSASNRVAKGLPRTS
Ga0182041_114594811	3300016294	Soil	MVAQEDAMRKRKKVKQWVKFTPGTDKPKNERAKEQMAEALAAYQGPITKCPPGSRDRALSASNRMAKGP
Ga0182041_117647611	3300016294	Soil	MRKQKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGS
Ga0182041_119132112	3300016294	Soil	MRKQKKFAQQKKFIPRAVRPKEERAKERELMAEALAAYQGPITKCPSGSARNRTLSASNRVAKGRSRPS
Ga0182033_102430951	3300016319	Soil	ERPKEERAKEFDRMAEALAAYQGPITKCPPGSARDRALSASNRVAKGPPRPS
Ga0182033_106197811	3300016319	Soil	MQKQKKFTQQKKFIPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGS
Ga0182033_108529911	3300016319	Soil	MRKQKKFMQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSASARVAKRPTQ
Ga0182035_101895442	3300016341	Soil	MRKQKNFTQQKKFIPRAVRPKEEQAKEHELMAEALAAYQGPITKCPPGSARDRTLSASNRVAKGPSRPS
Ga0182035_103459591	3300016341	Soil	MMKRKKFTQQKKFVAPRADRPKEERAKERERMAEALAADQGPITKCPPASGRVAKRPSRP
Ga0182035_108511902	3300016341	Soil	MRKQKKMFTQWKKFTPWADRPKDAQAKERERMAEALAGYQGPITKCPPGSAQEKALSASNRVAKGPSRPKL
Ga0182032_107441181	3300016357	Soil	MRIRKKFTQRKKFTPRARRPKEEQAKERERMADALAAYQGPITKCPPGNARDKALSASARVAKG
Ga0182032_112557402	3300016357	Soil	MRKQKKFAQQKKFIPRAVRPKEEQAKEHELMAEALAAYQGPITKCPPGSARDRTLSASNRVAKGPSRTS
Ga0182034_110270561	3300016371	Soil	KFTPRARRPKEEQAKERERMADALAAYQGPITKCPPGNARDKALSASARVAKGPSRPS
Ga0182034_112292202	3300016371	Soil	MLKRKKFTQRIELRAKRPKEEQAKERERMAEALAAYQGPITKCEPGIARDRALSASTRVAKAPPQTS
Ga0182037_115533671	3300016404	Soil	MRKQKKFTQQKKFIPRAVRPNDARAKERMADALAAYQGPITKCPPGSAQKRALSASTNVA
Ga0182037_119260001	3300016404	Soil	MRIRKKFTQRKKFTPRARRPKEEQAKERERMAEALAAYHGPVTKCPPGSARDRALSASARVAKGPPSPVNLGRHVRRPFFI
Ga0182039_113406551	3300016422	Soil	MRKQKKSTTQQKKFIPMAVRPKDEQAKERMAEALAAYRGAITKCPPGSLKDRALSA
Ga0182039_115715492	3300016422	Soil	MLKGKKYTHYTPRADRPKDWQAKACEHMAEALAAYQGPITKCPPDSSRHRALSASSRVAKGPSRLS
Ga0182039_119585621	3300016422	Soil	MRIRKKFTQRKKFTPRARRPKEEQAKERERMAEALAAYQGPITKCEPGIARDRALSASKLVAKAPPRTS
Ga0182038_107380672	3300016445	Soil	MKRKKFTQQKKFFTPRADRPKEERAKERERMAEALAAYQGPITKCPPASGRVAK
Ga0182038_108076791	3300016445	Soil	MRKQKKFTQQKKFIPSAVRPKEEQAKEHELMAEALAAYQGPITKCPPGSARDRTLSASNRVAKGPSRPS
Ga0187802_100117681	3300017822	Freshwater Sediment	MQRLIAIQWPQGDAMLKRKKFTQRKRFMPRADRPMEEQAKERESMAEALVVYQGPITKCPPGRVQRRARVAK
Ga0187801_101137671	3300017933	Freshwater Sediment	MLKRKKFTQRKRFMPRADRPMEEQAKERESMAEALVVYQGPITKCPPGRVQRRARVAKRPSRSS
Ga0187819_100083228	3300017943	Freshwater Sediment	MQRLIAIQWPQGDAMLKRKKFTQRKRFMPRADRPMEEQAKERESMAEALVVYQGPITKCPPGRVQRRARVAKRPSRSS
Ga0187778_102028462	3300017961	Tropical Peatland	MRKRKKFKQRVAFTAGTDRPKDERAKERMAEALAAYQGPITQCPPESAPKRALSASNRMAKGPSRPF
Ga0187783_100299613	3300017970	Tropical Peatland	MRKQMKFTPRKKYTPRADRPNEQRARERELMAQALAAYQGPITKCQPESAQGRALSASANVAKGPSKPR
Ga0187783_100471554	3300017970	Tropical Peatland	MRKRKKFKQRVEFTAGTDRPKDERAKERMAEALAAYQGPITQCPPESAPKRALSASNRMAKGPSRPF
Ga0187777_104957952	3300017974	Tropical Peatland	MRKRKKITQRKKFTPGTDRPKDERAKEQMVKALADYQGPITKCPPGSAQKKALSASANVAKGVRRRPPR
Ga0187767_101906972	3300017999	Tropical Peatland	MRKRKKFKQRVEFTAGTDRPKDERAKERMAEALAAYQGPITQCPPESAPKRALSASNR
Ga0126371_100710502	3300021560	Tropical Forest Soil	MRKQKKFTQQKKFIPRAIRPKDEQAKERMAEALAAYHGPITKCPQAGVRDHTLSASARVAKSRPPS
Ga0126371_111693011	3300021560	Tropical Forest Soil	MLRGKKYTHYTPRADRPKDWQAKARERMAEALAAYQGPVTKCPAGDAHDKALSASSRVAKRPPRSS
Ga0126371_125739012	3300021560	Tropical Forest Soil	MLKGKKYTHYTPRADRPKDWQAKACEHMAEALAAYQGPITKCPPDSSRHRALSASSRAAKGPSRLS
Ga0207862_10310043	3300027703	Tropical Forest Soil	MRKRKKFKQPVKFTPGNDRPKDEQAKERMAEALAAYQGPITKCPPGSARDKALSASSRVAKGPPRPS
Ga0170824_1003519442	3300031231	Forest Soil	MQRLIAIQWPQGDAMLKRKKSTQRKRFMPRADRPMEEQAKDRERMAEALAVYQGPITKCPPASARVAKRLPRPS
Ga0170824_1231598391	3300031231	Forest Soil	MRKQKKFTKWNKFRPRAARPKDERAKERERMTEALAAYQGPITKCPSGSVEDSALSASARVAKRPSRVR
Ga0318516_104038481	3300031543	Soil	MRKQKKSTTQQKKFIPMAVRPKDEQAKERMAEALAAYRGAITKCPPGSLKDRALSASNRV
Ga0318541_100200613	3300031545	Soil	MQQLSRDTVAAGGCAMLKRKKFTQRMKLMPRADRPKETQAKERMAEALAGYRGPITKCPPGSASNRVAKSRPTRPS
Ga0318541_102364822	3300031545	Soil	MRKQKKSTTQQKKFIPMAVRPKDEQAKERMAEALAAYRGAITKCPPGSLKDRALSASNRVAKGLPRTS
Ga0318541_103818211	3300031545	Soil	LIAIKFTQQKKFFTPRADRPKEERAKERERMAEALAAYQGPITKCPPASGRVAKRPSRPS
Ga0318541_105805652	3300031545	Soil	MRKQKKFTQQKKFMPRAPKEEQAKERERMAEALAGYQGPITKCPPGSGMAKRPSQSS
Ga0318538_105840081	3300031546	Soil	MRIRKKFTQRKKFTPRARRPKEEQAKERERMAEALAAYHGPVTKCPPGSARDRALSASARVAKGPPSPVNLGRHVRRPFFIGTILTLFGLSALVS
Ga0318538_106499851	3300031546	Soil	MQRFIAIQWPQGDAMRIRKKFTQRKKFTPRARRPKEEQAKERERMADALAAYQGPITKCPPGNARDKALSASARVAKGPSRPS
Ga0318528_106801711	3300031561	Soil	MMKRKKFTQQKKFFTPRADRPKEERAKERERMAEALAAYQGPIIKCPPPPGRVAKRPSRP
Ga0318515_100778444	3300031572	Soil	TPRPERPKEERAKEFDRMAEALAAYQGPITKCPPGSARDRALSASNRVAKGPPRPS
Ga0318515_104906421	3300031572	Soil	MLKRKKFTQRMKLMPRADRPKETQAKERMAEALAGYRGPITKCPPGSASNRVAKSRPTRP
Ga0318515_106485631	3300031572	Soil	MKRKKFTQQKKFFTPRADRPKEERAKERERMAEALAAYQGPITKCPPASGRVAKRPSRPS
Ga0310915_102997132	3300031573	Soil	MRKRKKFKQPVKFTPGNDRPKDEQAKERMAEALAAYQGPITKCPPESAQKSALSASANVAKGPSRPS
Ga0310915_104981141	3300031573	Soil	MQKQKKFTQQKKFIPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSASARVAKRPSQSS
Ga0318574_102591174	3300031680	Soil	MQKQKKFTQQKKFIPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSASARVAKRPS
Ga0318572_106944672	3300031681	Soil	MRKQKKFTQQKKFMPRAPKEEQAKERERMAEALAGYQGPITKCPPGSGRAKRPSRPA
Ga0310686_1093550535	3300031708	Soil	MRKRKKFTQWKKYTPRAARPQDERAEERERMAEALAAYPGPITKCPPGSVQDPALSASARVAKRPSRPS
Ga0306917_112133571	3300031719	Soil	MMKRKKFTQQKKFVAPRADRPKEERAKERERMAEALAAYQGPITKCPPAPGRVAKRPSRP
Ga0318493_103068621	3300031723	Soil	MRKQKKSTTQQKKFIPMAVRPKDEQAKERMAEALAAYRGAITKCPPGSLKD
Ga0306918_103225772	3300031744	Soil	MRKQKNFTQQKKFIPRAVRPKEEQAEERERMAEALAAYQGPITKCPPGSARDRTLSASNRVAKGPSRTS
Ga0306918_105319222	3300031744	Soil	MRKQKKFTQQKKFMPRAPKEEQAKERDRMADALAAYQGPITKCPPGSARDRALSASNQVAKGPSRPSS
Ga0318526_104570601	3300031769	Soil	KKFTQQKKFMPRAPKEEQAKERERMAEALAGYQGPITKCPPGSASNRVAKSRPTRPS
Ga0318521_108982002	3300031770	Soil	MRIRKKFTQRKKFTPRARRPKEEQAKERERMAEALAAYHGPVTKCPPGSARDRALPASARVAKGPPSPVN
Ga0318547_110333971	3300031781	Soil	MLKRKKFTQRIELRAKRPKEEQAKERERMAEALAAYQGPITKCPPGSARDRALSASNQVAKGPSRPSS
Ga0310917_106750102	3300031833	Soil	MMKRKKFTQQKKFVAPRADRPKEERAKERERMAEALAAYQGPIIKCPPPPGRVAKRP
Ga0306919_101968901	3300031879	Soil	MMKRKKFTQQKKFVAPRADRPKEERAKERERMAEALAAYQGPITKCPPAPGRVA
Ga0306919_106630041	3300031879	Soil	MRKQKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSASARVAKR
Ga0306919_109756082	3300031879	Soil	MRKQKKFTQQKKFIPRAVRPNDARAKERMAEALAAYQGPITKCPPGSARDRALSSSNRVAKGPTRPA
Ga0306919_111194932	3300031879	Soil	MRKQKKFTQQKKFIPRAVRPKEEQAKEHELMAEALAAYQGPITKCPPGSARDRTLSASNRVAKGPSRPS
Ga0306925_108877622	3300031890	Soil	MRIRKKFTQRKKFTPRARRPKEEQAKERERMAEALAAYHGPVTKCPPGSARDRALPASARVAKGPPSPVNLGRHVRRPFFIGTILTLFGLSALVS
Ga0306925_109567242	3300031890	Soil	MRKQKKFTQQKKFIPRAVRPKEEQAKEHELMAEALAAYQGPITKCPPGSARDRTLSAS
Ga0306925_122628112	3300031890	Soil	MLKRKKFTQRIELRAKRPKEEQAKERERMAEALAAYQGPITKCEPGIARDRALSASKLVAKAPPRTS
Ga0318520_103336982	3300031897	Soil	MLKRKKFTQRMRLMPRADRPKETQAKERMAEALAGYRGPITKCPPGSASNRVAKSRPTRP
Ga0306923_104041503	3300031910	Soil	MRKQKNFTQQKKFIPRAVRPKEEQAEERERMAEALATYQGPITKCPPGSARDRTLSASNRVAKEPSRTS
Ga0306923_105506232	3300031910	Soil	MKRKKFTPRIELRAKRPKEEQAKERERMAEALAAYQGPVTKCPQAGVRDHTLSASARVAKSRPPS
Ga0306921_101818971	3300031912	Soil	MRKRKKVKQWVKFTPGTDKPKNERAKEQMAEALAAYQGPITKCPPGSRDRALSASNRMAKGPSRPS
Ga0306921_123776211	3300031912	Soil	MRKQKKFTQQKKFIPRAVRPKEEQAKEHELMAEALAAYQGPITKCPPGSARDRTLSASNRVAKEPSR
Ga0310912_107517921	3300031941	Soil	MKRKKFTQQKKFFTPRADRPKEERAKERERMAEALAAYQGPITKCPPAPGRVAKRPSRPS
Ga0310916_101067861	3300031942	Soil	MQQLSRDTVAAGGCAMLKRKKFTQRMRLMPRADRPKETQAKERMAEALAGYRGPITKCPPGSASNRVAKSRPTRPS
Ga0310916_101525302	3300031942	Soil	MMKRKKFTQQKKFVAPRADRPKEERAKERERMAEALAAYQGPITKCPPASGRVAKRPSRP
Ga0310913_111037521	3300031945	Soil	MRKQKKFTQQKKFIPRAVRPKEEQAKEHELMAEALAAYQGPITKCPPGSARDRTLSASNRVAKGPSRTS
Ga0310910_108963212	3300031946	Soil	VAQEDAMRKRKKVKQWVKFTPGTDKPKNERAKEQMAEALAAYQGPITKCPPGSRDRALSASNRMAKGPSRPS
Ga0310909_103897542	3300031947	Soil	MRKQKKMFTQWKKFTPWADRPKDAQAKERERMAEALAGYQGPITKCPPGSGRAKRPSQPS
Ga0306926_100229323	3300031954	Soil	MRKQKKFIQQKKFIPRAVGPSEQRAQERERMAEALAAYQGPITKCPPGSAQKRALSASTNVAKGPSRPPK
Ga0306926_102770361	3300031954	Soil	MRKQKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCLPGSGRAKRPSQPS
Ga0306926_110825991	3300031954	Soil	MRKQKKFTQQKKFMPRAPKEEQAKERDRMADALAAYQGPITKCPPGSARDRALSASNQVAKGPSRPS
Ga0306922_120234612	3300032001	Soil	MRKQKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSASARVAKRPTQ
Ga0318507_102110101	3300032025	Soil	RAVGPSEQRAQERERMAEALAAYQGPITKCPPGSAQKRALSASTNVAKGPSRPPK
Ga0318507_104337211	3300032025	Soil	MKRKKFTQQKKFFTPRADRPKEERAKERERMAEALAAYQGPIIKCPPPPGRVAKRPSRPS
Ga0310911_105783501	3300032035	Soil	LIATQGGDAMRKQKKSTTQQKKFIPMAVRPKDEQAKERMAEALAAYRGAITKCPPGSLKDRALSASNRVAKGLPRTS
Ga0318575_103307541	3300032055	Soil	MRKQKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSASARVAKRPSQSS
Ga0318533_101899231	3300032059	Soil	RPERPKEERAKEFDRMAEALAAYQGPITKCPPGSARDRALSASNRVAKGPPRPS
Ga0318533_109021851	3300032059	Soil	MLKGKKFTQPKRSTPRASKEEQAKERERMVEALAAYQGPITKCRPGSVQDREL
Ga0306924_115612601	3300032076	Soil	MRKQKKFAQQKKFIPRAVRPKEERAKERELMAEALAAYQGPITKCPSGGAPNRT
Ga0306924_116748931	3300032076	Soil	MRIRKKFTQRKKFTPRARRPKEEQAKERERMADALAAYQGPITKCPPGNARDKALSASARVAKGPSRPS
Ga0306924_124015741	3300032076	Soil	MKRKKFTQRIELRAKRPKEEQAKERERMADALAAYQGPITKCPPGSIQDRALSASNRLAKRPSRPS
Ga0306920_1005710591	3300032261	Soil	MQRFDCDSVAGDAMLKGKKYTHYTPRADRPKDWQAKACEHMAEALAAYQGPITKCPPDSSRHRALSASSRVAKGPSRLS
Ga0306920_1013046672	3300032261	Soil	MVAQEDAMRKRKKVKQWVKFTPGTDKPKNERAKEQMAEALAAYQGPITKCPPGSRDRALSASNRMAKGPSRPS
Ga0306920_1017633062	3300032261	Soil	MRKQKKFMQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSASARVAKRPSQSS
Ga0306920_1018363772	3300032261	Soil	MRKQKKFTQQKKFMPRAVRPKEEQAKERERMAEALAGYQGPITKCPPGSAPAR
Ga0306920_1019434751	3300032261	Soil	MRKQKKLTQRKKYTPMLNWPKDAQAKERERMAEALAAYQGPITKCPPGSAQEKALSASNRVAKGPSRPKL
Ga0306920_1027547452	3300032261	Soil	MRKQKNFTQQKKFIPRAVRPKEEQAEERERMAEALAAYQGPITKCPPGSARDRTLSASNRVAKGPSRPS
Ga0310914_118730762	3300033289	Soil	MRIRKKFTQRKKFTPRARRPKEEQAKERERMAEALAAYHGPVTKCPPGSARDRAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057033

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences