NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F056884

Metagenome Family F056884

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F056884
Family Type Metagenome
Number of Sequences 137
Average Sequence Length 90 residues
Representative Sequence LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Number of Associated Samples 109
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Archaea
% of genes with valid RBS motifs 53.28 %
% of genes near scaffold ends (potentially truncated) 26.28 %
% of genes from short scaffolds (< 2000 bps) 72.99 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Archaea (100.000 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.898 % of family members)
Environment Ontology (ENVO) Unclassified
(43.066 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.985 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122
1MSB1_00113200
2SwRhRL2b_0762.00001200
3ICCgaii200_08953233
4JGI11643J11755_118403092
5JGI10215J12807_11434952
6JGI10214J12806_109532032
7F14TB_1030171401
8Ga0055471_101684071
9Ga0055466_101340462
10Ga0062593_1014823412
11Ga0062589_1007253131
12Ga0063356_1061662571
13Ga0062592_1008523621
14Ga0062591_1001851682
15Ga0065704_100020647
16Ga0065704_102320561
17Ga0065705_100006001
18Ga0070676_100442822
19Ga0070680_1000581192
20Ga0070687_1002997541
21Ga0070692_100196894
22Ga0070669_1013339512
23Ga0070705_1000936251
24Ga0070700_1004967471
25Ga0070662_1007935542
26Ga0070697_1001984272
27Ga0068861_1020998591
28Ga0075417_100664462
29Ga0082029_11350932
30Ga0082029_15140363
31Ga0075428_1002903272
32Ga0075428_1006201963
33Ga0075428_1026837542
34Ga0075421_1002264322
35Ga0075421_1007132281
36Ga0075421_1018752961
37Ga0075421_1022998892
38Ga0075430_1001728792
39Ga0075431_1001229193
40Ga0075431_1003496232
41Ga0075420_1003189252
42Ga0075429_1007593131
43Ga0075419_100285285
44Ga0075419_106438492
45Ga0075419_111958852
46Ga0105098_100147492
47Ga0111539_127169102
48Ga0075418_101067104
49Ga0075418_111511541
50Ga0105091_104613572
51Ga0114129_103089172
52Ga0114129_106858282
53Ga0114129_116069021
54Ga0111538_127424812
55Ga0105249_107764301
56Ga0134123_100609143
57Ga0157281_10005344
58Ga0157287_10239392
59Ga0157305_100859392
60Ga0157285_100061961
61Ga0157292_100828411
62Ga0157288_100481102
63Ga0157289_102806691
64Ga0157282_101201231
65Ga0157296_100095711
66Ga0157295_103781972
67Ga0157290_100814121
68Ga0157298_103079191
69Ga0157297_100133003
70Ga0157297_100261984
71Ga0157310_101575141
72Ga0157307_10060991
73Ga0157307_10123791
74Ga0157371_103286961
75Ga0173483_100069533
76Ga0173478_100016733
77Ga0132258_101378976
78Ga0132256_1001690992
79Ga0132255_1007607413
80Ga0184620_102905422
81Ga0184609_101864071
82Ga0190268_115289001
83Ga0173481_100780762
84Ga0173479_101950582
85Ga0173479_103272981
86Ga0173479_103915752
87Ga0193741_10006203
88Ga0193741_10074963
89Ga0193711_10035904
90Ga0193739_100009218
91Ga0193739_10041773
92Ga0210378_103964371
93Ga0193737_10327031
94Ga0222623_101573831
95Ga0247747_10013274
96Ga0247747_10107372
97Ga0247790_101150232
98Ga0247744_10891211
99Ga0247748_10300692
100Ga0247796_10221391
101Ga0210087_10047291
102Ga0207682_101038102
103Ga0207647_100130714
104Ga0207660_101459592
105Ga0207706_101682861
106Ga0207679_118672901
107Ga0207708_100392064
108Ga0207708_100395343
109Ga0207674_101257523
110Ga0210000_10036332
111Ga0209995_10226172
112Ga0209983_10044752
113Ga0209819_101611512
114Ga0209974_100195062
115Ga0209481_100716602
116Ga0209481_101554361
117Ga0209481_104525072
118Ga0207428_105025632
119Ga0209382_101419072
120Ga0209382_112459901
121Ga0209820_11584462
122Ga0310888_100373753
123Ga0310888_108371252
124Ga0310887_100736093
125Ga0310887_101240402
126Ga0310907_100138493
127Ga0310907_100411202
128Ga0310892_102017322
129Ga0310893_101815692
130Ga0310900_100473023
131Ga0310901_100006971
132Ga0310901_100222681
133Ga0310884_106022352
134Ga0310899_100359771
135Ga0310890_110834082
136Ga0310889_102172022
137Ga0307471_1014165472
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.26%    β-sheet: 24.35%    Coil/Unstructured: 57.39%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITESequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Natural And Restored Wetlands
Groundwater Sediment
Groundwater Sediment
Soil
Terrestrial Soil
Switchgrass Rhizosphere
Termite Nest
Soil
Soil
Soil
Hardwood Forest Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Rhizosphere And Bulk Soil
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
2.9%21.9%2.9%4.4%2.9%10.9%4.4%3.6%21.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MSB1_001132002140918002Rhizosphere And Bulk SoilLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERL
SwRhRL2b_0762.000012002162886007Switchgrass RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
ICCgaii200_089532332228664021SoilLEYCTQNRSEPNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMDNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
JGI11643J11755_1184030923300000787SoilLEYCTQNRSEPNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMDNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
JGI10215J12807_114349523300000881SoilMKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
JGI10214J12806_1095320323300000891SoilMKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPIDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
F14TB_10301714013300001431SoilGVGINLEYCTQNRSESNLDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0055471_1016840713300003987Natural And Restored WetlandsLEYRTQKRSVSNIDLIRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMNNGIRYYYVEIQCDDRNFMINALGSEAERLFKAVNSNSE*
Ga0055466_1013404623300003997Natural And Restored WetlandsLEYRTQKRSVSNIDLIRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMNNGIRYYYVEIQCDDRNFMINALGSE
Ga0062593_10148234123300004114SoilVILTKYVTSYGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0062589_10072531313300004156SoilRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0063356_10616625713300004463Arabidopsis Thaliana RhizosphereMKQNIASGINLEDKDQKPSISNIDLRGDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCYEGNFIINAHGSEAERLFKAVHSISE*
Ga0062592_10085236213300004480SoilLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0062591_10018516823300004643SoilLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0065704_1000206473300005289Switchgrass RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLREKKYHFTVVPKDIMYMRNGIRYYYVEIQCDDRNFMVNAYGSEAERLFKAVNSIME*
Ga0065704_1023205613300005289Switchgrass RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0065705_1000060013300005294Switchgrass RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYXFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAYGSEAERLFKAVNSIME*
Ga0070676_1004428223300005328Miscanthus RhizosphereLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE*
Ga0070680_10005811923300005336Corn RhizosphereVILTKYVTSYGDGITLEYCTQKRSVSNIDLIKDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0070687_10029975413300005343Switchgrass RhizosphereIGDGINLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE*
Ga0070692_1001968943300005345Corn, Switchgrass And Miscanthus RhizosphereLEYCTQNRSESNIDLTRDLQLITSEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYSMVNAHGSEAEILFKAVNSITE*
Ga0070669_10133395123300005353Switchgrass RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDKNFMVNAYGSEAERLFKAVNSNPK*
Ga0070705_10009362513300005440Corn, Switchgrass And Miscanthus RhizosphereVILTKYVTSYGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYCYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0070700_10049674713300005441Corn, Switchgrass And Miscanthus RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDKNFMVNAYGSEAERLFKAVNSN
Ga0070662_10079355423300005457Corn RhizosphereLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAYGSEAERLFKAVNSITE*
Ga0070697_10019842723300005536Corn, Switchgrass And Miscanthus RhizosphereLEHCTQKRSVSNIDLTGDLQLITIEDLIPQLRDKEYHFTVVRKDIMYMHNGVRYYYVEIQCDDSNFMINAIGSDAERLFKAVNFNTE*
Ga0068861_10209985913300005719Switchgrass RhizosphereIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0075417_1006644623300006049Populus RhizosphereMTQDMVSRKNLEYKAQKSNISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRHYYIEIQCDDGNFVVNAHGSEAERLFKAVHSISE*
Ga0082029_113509323300006169Termite NestLEYKTQRPNISNINLTRDLQPITIEDLIPQLRDKEYHFTIVPKDLMHLNNGIRHYYVEIQCEDGNLVVNAHGSEAERLFKAVHSISE*
Ga0082029_151403633300006169Termite NestMKQNIVSGNKFGIQDSETHISSIDLTLDLKPITIEDLVPQLRDKEYHFTVVPKDLMHLNNGIRHYYVEIQCDDGNFVVNAHGSEAERLFKAVHSISE*
Ga0075428_10029032723300006844Populus RhizosphereLEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHFTVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE*
Ga0075428_10062019633300006844Populus RhizosphereINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKNIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLFKAVHSISE*
Ga0075428_10268375423300006844Populus RhizosphereMKQNIASGINLEDKDQKPSISNTDLRWDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCDEGNFIINAHGSEAERLFKVVHSIPE*
Ga0075421_10022643223300006845Populus RhizosphereMKQYIVSGINLEYKSQKPNISSIDLTRDLQPITIEDLVPQLRDKEYHFSVVPKDIMHMNNGIRHYYVEIQYDDGNFMINAYGSEAERLFKVVHSISE*
Ga0075421_10071322813300006845Populus RhizosphereTVSGINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLLKPSILFLNNNP*
Ga0075421_10187529613300006845Populus RhizosphereLEYKSQKPNISSIDLTRDIQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRYYYVEIQCDDGNLVVNAHGSEAERLFKAVHSISE*
Ga0075421_10229988923300006845Populus RhizosphereMTQNMVSKKNLEYKAQKSNISSIDLTRDLEPITIEDLVLQLRDKEYHFTVVPKDIMYMNNGIRHYYVEIQCDDRNFVVNAHGIEAERLFKAVHSISE*
Ga0075430_10017287923300006846Populus RhizosphereMAQNTVSGINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKNIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLFKAVHSISE*
Ga0075431_10012291933300006847Populus RhizosphereLEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHITVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE*
Ga0075431_10034962323300006847Populus RhizosphereMTQDMVSRKNLEYKAQKSNISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGVRHYYVEIQCDEGNFVVNAHGSEAERLFKAVHSISE*
Ga0075420_10031892523300006853Populus RhizosphereLVYKSQKPNISSIDLTRDIQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRYYYVEIQCDDGNLVVNAHGSEAERLFKAVHSISE*
Ga0075429_10075931313300006880Populus RhizosphereVGINLEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHFTVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE*
Ga0075419_1002852853300006969Populus RhizosphereMAQNTVSGINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKNIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLLKPSILFLNNNP*
Ga0075419_1064384923300006969Populus RhizosphereLTRDLQPITIEDLVPQLRDKEYHFSVVPKEIMHMNNGIRHYYVEIQYDDGNFMINAYGSEAERLFKVVHSISE*
Ga0075419_1119588523300006969Populus RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYTHNGIRYYYVEMQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0105098_1001474923300009081Freshwater SedimentMKQNIVSRINLEYKTQKPNIFSIDLTRDLQPITIEDLVPQLRGKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNFVVNAHGSEAERLFKAVHSISE*
Ga0111539_1271691023300009094Populus RhizosphereMTQDMVSRKNLEYKAQKSNISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGVRHYYVEIQCDEGNFVVNA
Ga0075418_1010671043300009100Populus RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQRDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0075418_1115115413300009100Populus RhizosphereYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHFTVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE*
Ga0105091_1046135723300009146Freshwater SedimentMKQNIVSRINLEYKTQKPNIFSIDLTRDLQPITIEDLVPQLRGKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNFVVNAHGSDRQYIHSFQV*
Ga0114129_1030891723300009147Populus RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNVHGSEAERLFKAVNSITE*
Ga0114129_1068582823300009147Populus RhizosphereVGINLEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHITVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE*
Ga0114129_1160690213300009147Populus RhizosphereMAQNTVSGINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLFKAVHSISE*
Ga0111538_1274248123300009156Populus RhizosphereGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVVIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0105249_1077643013300009553Switchgrass RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLREKKYHFTVVPKDIMYMRNGIRYYYVEIRCEVRNLREIAFGSEVEG*
Ga0134123_1006091433300010403Terrestrial SoilVILTKYVTSYGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQFRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE*
Ga0157281_100053443300012883SoilMKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFNVNAHGSEAERLFKVIQSILE*
Ga0157287_102393923300012885SoilMNLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0157305_1008593923300012891SoilMKQNIASGINLEDKDQKPSISNIDLRGDLQSITFEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
Ga0157285_1000619613300012897SoilMKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDVGNFIVNAHGSEAERLFKIIQSISE*
Ga0157292_1008284113300012900SoilMKQNIASGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
Ga0157288_1004811023300012901SoilLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDRYFMVNAHGSEAEILFKAVNSITE*
Ga0157289_1028066913300012903SoilPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
Ga0157282_1012012313300012904SoilMKQNIASGINLEDRAQKPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSILE*
Ga0157296_1000957113300012905SoilMKQNIASGINLEDRAQKSSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVLPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSISE*
Ga0157295_1037819723300012906SoilGVGINLEYCTHNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0157290_1008141213300012909SoilSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIRSISE*
Ga0157298_1030791913300012913SoilMKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAER
Ga0157297_1001330033300012914SoilMKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSISE*
Ga0157297_1002619843300012914SoilIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0157310_1015751413300012916SoilMKQNIASGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSISE*
Ga0157307_100609913300013096SoilLEYCTHNRSESNIDLTRDLQLITSEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0157307_101237913300013096SoilMKQNIASGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKFIQSISE*
Ga0157371_1032869613300013102Corn RhizosphereLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMFMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE*
Ga0173483_1000695333300015077SoilMKQNIASGINLEDRAQKSSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
Ga0173478_1000167333300015201SoilMKQNIASGINLEDRAQKPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
Ga0132258_1013789763300015371Arabidopsis RhizosphereLEYCTQKRSVSNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0132256_10016909923300015372Arabidopsis RhizosphereLEYCTQKRSVSNIDLIKDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0132255_10076074133300015374Arabidopsis RhizosphereLEYCTQKRSVSNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDSNFMINANGS
Ga0184620_1029054223300018051Groundwater SedimentTKSDIAAGISLEYHAQKRNISNNDLARNLQLITIEDLIPQLRHKEYQFTVVPKDIMYMHNGMRYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPE
Ga0184609_1018640713300018076Groundwater SedimentISLEYHAQKRNISNNDLTRNLQLITIEDLIPQLRHKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPE
Ga0190268_1152890013300018466SoilMKQNIGSGINLEYKSQKPHISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGTRHHYVEIQCDDGNFVVNAHGNEAERLFKAVHSISE
Ga0173481_1007807623300019356SoilCIGVGINLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0173479_1019505823300019362SoilVLLTKYVTSYGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANG
Ga0173479_1032729813300019362SoilLEYCTHNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0173479_1039157523300019362SoilMKQNIASGINLEDRAQKSSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE
Ga0193741_100062033300019884SoilMNQSIASGIDSERRTQIISIEDLYPQLRNKQYYFTVVPGDIMHMHNGIKYYYVEIQCDGKNFLINAYGNMAERLFKAVHSTHQ
Ga0193741_100749633300019884SoilMKQNIGGGINLEYKSQKPNISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNFVVNAHGNEAERLFKAVHSISE
Ga0193711_100359043300019997SoilLEYCTQKRSVTDINSTRDLQLITIEDLIPQLRDKEYHFTVIPKDIMYMRNGIRYYYVEIQCDDRYFMVNAHGSDAERLFKAVNSNPK
Ga0193739_1000092183300020003SoilMMKQNIGDRINLEYRTQKRNISNIDLSRDLQLSTIEDLIPQLRDKEYHFTVVPKDIMYMHNGISYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPQ
Ga0193739_100417733300020003SoilMDSTHDLQQITIEDLLPQLRNMQYHFTVVPEEIMYMGSGIKYYYVEIQSDDKNFMINAHGSEAERLFKAVHSIP
Ga0210378_1039643713300021073Groundwater SedimentNDLTRNLQLITIEDLIPQLRHKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPE
Ga0193737_103270313300021972SoilMMKQNIGGTINLEYRTQKRNISNIDLIRDLQLITIEDLIPQIRDKEYHFTVVPKDIMYMHNGISYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPQ
Ga0222623_1015738313300022694Groundwater SedimentLEYHAQKRNISNNDLTRNLQLITIENLIPQLRHKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPEYTPFKEPNMLFYASMICKL
Ga0247747_100132743300022737SoilLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE
Ga0247747_101073723300022737SoilMKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE
Ga0247790_1011502323300022915SoilMKQNIASGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE
Ga0247744_108912113300023073SoilMKQNIASGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVN
Ga0247748_103006923300023168SoilLEDRAQRPSISNIDLLRDLHPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE
Ga0247796_102213913300023261SoilLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0210087_100472913300025559Natural And Restored WetlandsLEYRTQKRSVSNIDLIRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMNNGIRYYYVEIQCDDRNFMINALGSEAERLFKAVNSNSE
Ga0207682_1010381023300025893Miscanthus RhizosphereLEYCTQKRSVSNIDLIKDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE
Ga0207647_1001307143300025904Corn RhizosphereLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE
Ga0207660_1014595923300025917Corn RhizosphereVILTKYVTSYGDGITLEYCTQKRSVSNIDLIKDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE
Ga0207706_1016828613300025933Corn RhizosphereLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAYGSEAERLFKAVNSITE
Ga0207679_1186729013300025945Corn RhizosphereGVGMNLEYCTQNRSESNLDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0207708_1003920643300026075Corn, Switchgrass And Miscanthus RhizosphereLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDKNFMVNAYGSEAERLFKAVNSIME
Ga0207708_1003953433300026075Corn, Switchgrass And Miscanthus RhizosphereVILTKYVTSYGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE
Ga0207674_1012575233300026116Corn RhizosphereLEYCTQNRSESNIDLTRDLQLITSEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAQRLFKAVNSITE
Ga0210000_100363323300027462Arabidopsis Thaliana RhizosphereLEYCTQNRSESNIDLTRDLQLITSEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0209995_102261723300027471Arabidopsis Thaliana RhizosphereLEYCTQNRSESNIDLTRDLQLITSEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYSMVNAHGSEAEILFKAVNSITE
Ga0209983_100447523300027665Arabidopsis Thaliana RhizosphereMKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSISE
Ga0209819_1016115123300027722Freshwater SedimentMKQNIVSRINLEYKTQKPNIFSIDLTRDLQPITIEDLVPQLRGKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNFVVNAHGSEAERLFKAVHSISE
Ga0209974_1001950623300027876Arabidopsis Thaliana RhizosphereMKQNIASGINLEDRAQKSSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSISE
Ga0209481_1007166023300027880Populus RhizosphereVGINLEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHITVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE
Ga0209481_1015543613300027880Populus RhizosphereMTQDMVSRKNLEYKAQKSNISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGVRHYYVEIQCDEGNFVVNAHGSEAERLFKAVHSISE
Ga0209481_1045250723300027880Populus RhizosphereMAQNTVSGINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKNIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLFKAVHSISE
Ga0207428_1050256323300027907Populus RhizosphereMKQNIASGINLEDKDQKPSISNTDLRWDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCDEGNFIINAHGSEAERLFKVVHSIPE
Ga0209382_1014190723300027909Populus RhizosphereLEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHITVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE
Ga0209382_1124599013300027909Populus RhizosphereMKQYIVSGINLEYKSQKPNISSIDLTRDLQPITIEDLVPQLRDKEYHFSVVPKDIMHMNNGIRHYYVEIQYDDGNFMINAYGSEAERLFKVVHSISE
Ga0209820_115844623300027956Freshwater SedimentLEHKTQKPNIFSIDLTRDLQPITIEDLVPQLRGKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNFVVNAHGSEAERLFKAVHSISE
Ga0310888_1003737533300031538SoilLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDTEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEA
Ga0310888_1083712523300031538SoilLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGS
Ga0310887_1007360933300031547SoilMKQNIASGINLEDKDQKPSISNIDLRGDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCYEGNFIINAHGSEAERLFKA
Ga0310887_1012404023300031547SoilLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDTEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0310907_1001384933300031847SoilMKQNIASGINLEDRAQKPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIRSISE
Ga0310907_1004112023300031847SoilLEYCTQKRSVSNIDLIKDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE
Ga0310892_1020173223300031858SoilLEYCSQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0310893_1018156923300031892SoilLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE
Ga0310900_1004730233300031908SoilLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0310901_1000069713300031940SoilLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKA
Ga0310901_1002226813300031940SoilQCIGVGINLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0310884_1060223523300031944SoilLEYCTQNRSESNIDLTRDLQLITIEDLIPQLREKKYHFTVVPKDIMYMRNGIRYYYVEIQCDDRNFMVNAYGSEAERLFKAVNSNPK
Ga0310899_1003597713300032017SoilQCIGVGINLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0310890_1108340823300032075SoilMKQNIASGINLEDKDQKPSISNTDLRGDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCYEGNFIINAHGSEAERLFKVVHSIPE
Ga0310889_1021720223300032179SoilMKQNIASGINLEDKDQKPSISNIDLRGDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCDEGNFIINAHGSEAERLFKVVHSIPE
Ga0307471_10141654723300032180Hardwood Forest SoilLEYCTQKRNVTNIDLTRDPQLITIEDLIPQLRDKEYRFTIVPKEIMYMHNGIRYYYVEIQCDDGNYMVNAHGSDAERLFKAVNSNPE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.