Metagenome / Metatranscriptome Family F056792

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056792
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	70 residues
Representative Sequence	MATLEMVPLRSMMPHTGRVTLRYALPTVKIDVPADFRAADLPRIATTPQVEPTASDEAELETTARKGGEAR
Number of Associated Samples	112
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.94 %
% of genes near scaffold ends (potentially truncated)	15.33 %
% of genes from short scaffolds (< 2000 bps)	97.81 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.942 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (31.387 % of family members)
Environment Ontology (ENVO)	Unclassified (40.146 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.934 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.03% β-sheet: 18.18% Coil/Unstructured: 78.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00410	Ribosomal_S8	51.09
PF00253	Ribosomal_S14	24.82
PF00673	Ribosomal_L5_C	12.41
PF00347	Ribosomal_L6	8.03
PF00238	Ribosomal_L14	1.46
PF00861	Ribosomal_L18p	0.73
PF00327	Ribosomal_L30	0.73
PF12680	SnoaL_2	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0096	Ribosomal protein S8	Translation, ribosomal structure and biogenesis [J]	51.09
COG0199	Ribosomal protein S14	Translation, ribosomal structure and biogenesis [J]	24.82
COG0094	Ribosomal protein L5	Translation, ribosomal structure and biogenesis [J]	12.41
COG0097	Ribosomal protein L6P/L9E	Translation, ribosomal structure and biogenesis [J]	8.03
COG0093	Ribosomal protein L14	Translation, ribosomal structure and biogenesis [J]	1.46
COG0256	Ribosomal protein L18	Translation, ribosomal structure and biogenesis [J]	0.73
COG1841	Ribosomal protein L30/L7E	Translation, ribosomal structure and biogenesis [J]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.94 %
Unclassified	root	N/A	16.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.94 %
Unclassified	root	N/A	16.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.94 %
Unclassified	root	N/A	16.06 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.02 %
Unclassified	root	N/A	16.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	74.45 %
Unclassified	root	N/A	16.06 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	47.45 %
Unclassified	root	N/A	16.06 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	3.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	16.79 %
Unclassified	root	N/A	16.06 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.84 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	3.65 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	1.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.73 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.06 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.84 %
Listeriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae	3.65 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.46 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	1.46 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.06 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.84 %
Listeria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria	3.65 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.46 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	1.46 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.06 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.84 %
Listeria monocytogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria monocytogenes	3.65 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.46 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	1.46 %
Mycobacterium xenopi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi	0.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.06 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.84 %
Listeria monocytogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria monocytogenes	3.65 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.46 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	1.46 %
Mycobacterium xenopi 3993	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi → Mycobacterium xenopi 3993	0.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000828\|JGI12467J12023_1051546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	935	Open in IMG/M
3300000829\|JGI12397J12024_1096109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	899	Open in IMG/M
3300000833\|JGI12273J12029_10025154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1784	Open in IMG/M
3300000833\|JGI12273J12029_10071406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	571	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1068152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	506	Open in IMG/M
3300001305\|C688J14111_10240577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria monocytogenes	566	Open in IMG/M
3300001686\|C688J18823_10176746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1452	Open in IMG/M
3300002568\|C688J35102_118332842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi → Mycobacterium xenopi 3993	549	Open in IMG/M
3300002568\|C688J35102_118489873	Not Available	564	Open in IMG/M
3300002568\|C688J35102_119491933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	705	Open in IMG/M
3300002568\|C688J35102_120800630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1619	Open in IMG/M
3300003573\|Ga0007412J51696_1068367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	778	Open in IMG/M
3300003659\|JGI25404J52841_10059042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	804	Open in IMG/M
3300004016\|Ga0058689_10046522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria monocytogenes	794	Open in IMG/M
3300004081\|Ga0063454_101884223	All Organisms → cellular organisms → Bacteria → Terrabacteria group	526	Open in IMG/M
3300004479\|Ga0062595_100975384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300004800\|Ga0058861_11645822	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005505\|Ga0068898_10116717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1146	Open in IMG/M
3300005505\|Ga0068898_10208488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2706	Open in IMG/M
3300005505\|Ga0068898_10296023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	845	Open in IMG/M
3300005506\|Ga0068912_11032921	Not Available	660	Open in IMG/M
3300005562\|Ga0058697_10456011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	645	Open in IMG/M
3300005614\|Ga0068856_100086921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3107	Open in IMG/M
3300005616\|Ga0068852_100937169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	884	Open in IMG/M
3300005616\|Ga0068852_101079828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	823	Open in IMG/M
3300006020\|Ga0058704_10829918	Not Available	547	Open in IMG/M
3300006175\|Ga0070712_101340032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300006605\|Ga0074057_11684763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300006755\|Ga0079222_10131622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1384	Open in IMG/M
3300006806\|Ga0079220_11114255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	641	Open in IMG/M
3300009144\|Ga0058702_10308401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300010039\|Ga0126309_10935437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300010044\|Ga0126310_10506672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883	Open in IMG/M
3300010045\|Ga0126311_10883272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	725	Open in IMG/M
3300010063\|Ga0127431_115303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria monocytogenes	505	Open in IMG/M
3300010070\|Ga0127441_114720	Not Available	871	Open in IMG/M
3300010070\|Ga0127441_130043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	652	Open in IMG/M
3300010070\|Ga0127441_138869	Not Available	613	Open in IMG/M
3300010079\|Ga0127436_159793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	729	Open in IMG/M
3300010081\|Ga0127457_1047989	Not Available	541	Open in IMG/M
3300010083\|Ga0127478_1053166	Not Available	569	Open in IMG/M
3300010083\|Ga0127478_1057624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300010092\|Ga0127468_1054947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	677	Open in IMG/M
3300010094\|Ga0127480_1102153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	730	Open in IMG/M
3300010098\|Ga0127463_1028076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300010100\|Ga0127440_1020612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300010103\|Ga0127500_1105158	Not Available	508	Open in IMG/M
3300010121\|Ga0127438_1092279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718	Open in IMG/M
3300010122\|Ga0127488_1041668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria monocytogenes	643	Open in IMG/M
3300010122\|Ga0127488_1084948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300010123\|Ga0127479_1031428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300010123\|Ga0127479_1119443	Not Available	573	Open in IMG/M
3300010124\|Ga0127498_1088715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300010124\|Ga0127498_1092096	Not Available	777	Open in IMG/M
3300010130\|Ga0127493_1118526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217	Open in IMG/M
3300010130\|Ga0127493_1147546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300010132\|Ga0127455_1138058	All Organisms → cellular organisms → Bacteria → Terrabacteria group	797	Open in IMG/M
3300010139\|Ga0127464_1222077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1160	Open in IMG/M
3300010141\|Ga0127499_1049499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300010141\|Ga0127499_1239276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300010146\|Ga0126320_1022900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1308	Open in IMG/M
3300010146\|Ga0126320_1432450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	854	Open in IMG/M
3300010152\|Ga0126318_10378941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	985	Open in IMG/M
3300010371\|Ga0134125_10803825	Not Available	1035	Open in IMG/M
3300010371\|Ga0134125_10860948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	996	Open in IMG/M
3300010396\|Ga0134126_11571942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300012212\|Ga0150985_107967749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300012212\|Ga0150985_109866706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300012212\|Ga0150985_116298773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3220	Open in IMG/M
3300012224\|Ga0134028_1234308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300012374\|Ga0134039_1076537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300012383\|Ga0134033_1081550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300012384\|Ga0134036_1073268	Not Available	549	Open in IMG/M
3300012389\|Ga0134040_1137798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300012390\|Ga0134054_1091376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria monocytogenes	565	Open in IMG/M
3300012391\|Ga0134035_1230585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	710	Open in IMG/M
3300012393\|Ga0134052_1062225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	991	Open in IMG/M
3300012396\|Ga0134057_1305475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300012399\|Ga0134061_1112429	Not Available	637	Open in IMG/M
3300012399\|Ga0134061_1284881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300012403\|Ga0134049_1141425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	557	Open in IMG/M
3300012403\|Ga0134049_1307525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300012404\|Ga0134024_1308267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	849	Open in IMG/M
3300012409\|Ga0134045_1338032	Not Available	507	Open in IMG/M
3300012410\|Ga0134060_1271737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1132	Open in IMG/M
3300012469\|Ga0150984_106827636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	912	Open in IMG/M
3300012469\|Ga0150984_121156148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300012915\|Ga0157302_10504460	Not Available	523	Open in IMG/M
3300012976\|Ga0134076_10525885	Not Available	543	Open in IMG/M
3300013102\|Ga0157371_10105922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1995	Open in IMG/M
3300013308\|Ga0157375_12201653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300014487\|Ga0182000_10043777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1312	Open in IMG/M
3300014487\|Ga0182000_10443985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300014488\|Ga0182001_10120336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	849	Open in IMG/M
3300014497\|Ga0182008_10838615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300014745\|Ga0157377_10507467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	844	Open in IMG/M
3300018468\|Ga0066662_10249710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1449	Open in IMG/M
3300018890\|Ga0193595_1144920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300018892\|Ga0193607_1045931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1347	Open in IMG/M
3300018894\|Ga0193603_1124426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300020069\|Ga0197907_10648975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300020078\|Ga0206352_10390957	All Organisms → cellular organisms → Bacteria → Terrabacteria group	860	Open in IMG/M
3300021377\|Ga0213874_10108941	Not Available	929	Open in IMG/M
3300021445\|Ga0182009_10060118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1637	Open in IMG/M
3300021445\|Ga0182009_10087249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300025915\|Ga0207693_10309973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1236	Open in IMG/M
3300025981\|Ga0207640_11060300	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300026067\|Ga0207678_11390087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	621	Open in IMG/M
3300026078\|Ga0207702_11067433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	801	Open in IMG/M
3300026527\|Ga0209059_1279196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300027718\|Ga0209795_10173771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300027809\|Ga0209574_10339278	Not Available	522	Open in IMG/M
3300030501\|Ga0268244_10232984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300030510\|Ga0268243_1141409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300030513\|Ga0268242_1049245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300030515\|Ga0268254_10064197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1152	Open in IMG/M
3300030516\|Ga0268255_10173490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300030981\|Ga0102770_11229385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300031058\|Ga0308189_10496969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300032782\|Ga0335082_10379875	Not Available	1278	Open in IMG/M
3300033988\|Ga0334909_011872	Not Available	1142	Open in IMG/M
3300034000\|Ga0334918_014157	Not Available	1090	Open in IMG/M
3300034001\|Ga0334919_046080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718	Open in IMG/M
3300034004\|Ga0334926_024783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	980	Open in IMG/M
3300034005\|Ga0334930_031148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	864	Open in IMG/M
3300034007\|Ga0334936_137514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300034009\|Ga0334944_025101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1135	Open in IMG/M
3300034027\|Ga0334949_103450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300034027\|Ga0334949_193229	All Organisms → cellular organisms → Bacteria → Terrabacteria group	510	Open in IMG/M
3300034030\|Ga0334952_093727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300034173\|Ga0334925_020568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1469	Open in IMG/M
3300034221\|Ga0334937_046588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	1178	Open in IMG/M
3300034268\|Ga0372943_0509770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300034376\|Ga0334923_035601	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300034391\|Ga0334917_108092	Not Available	538	Open in IMG/M
3300034393\|Ga0334914_012589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	955	Open in IMG/M
3300034402\|Ga0334960_005247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1742	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.56%
Host-Associated	Host-Associated	20.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.37%
Plants	Host-Associated → Plants	19.71%
Aquatic	Environmental → Aquatic	2.19%
Human	Host-Associated → Human	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.11%
Phylloplane	Host-Associated → Plants → Phylloplane	4.38%
Freshwater	Environmental → Aquatic → Freshwater	2.19%
Phyllosphere	Host-Associated → Plants → Phyllosphere	2.19%
Digestive System	Host-Associated → Human → Digestive System	0.73%
Roots	Host-Associated → Plants → Roots	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.01%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	8.03%
Sand	Environmental → Terrestrial → Soil → Sand	8.03%
Loam	Environmental → Terrestrial → Soil → Loam	6.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.38%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.19%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	2.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.73%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.53%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	8.03%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	8.03%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	4.38%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	2.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.73%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	31.39%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	8.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.11%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	4.38%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	4.38%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	3.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.65%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.92%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.19%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.19%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.73%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.73%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.73%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000828	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate C) D5C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000829	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate A) 0A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000833	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate C) 0C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003573	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Bulk_28 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005505	Soil microbial communities from Colorado Plateau and Sonoran desert - Soil Crust after wet up 5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005506	Soil microbial communities from Colorado Plateau, USA - Soil Crust after dry out 3A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006020	Agave microbial communities from Guanajuato, Mexico - Mg.Sf.e	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009144	Agave microbial communities from Guanajuato, Mexico - Or.Sf.e	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010063	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010070	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010079	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010083	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010092	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010094	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010098	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010100	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010103	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010121	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010123	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010139	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012374	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012383	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012384	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018890	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, bundles v1	Environmental	Open in IMG/M
3300018892	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, bundles v1	Environmental	Open in IMG/M
3300018894	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, bundles v1	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300030501	Agave microbial communities from Guanajuato, Mexico - Mg.Sf.e (v2)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030515	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030981	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 4C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033988	Soil microbial communities from Mojave Desert, California, United States - 5NOC	Environmental	Open in IMG/M
3300034000	Biocrust microbial communities from Mojave Desert, California, United States - 14HMC	Environmental	Open in IMG/M
3300034001	Biocrust microbial communities from Mojave Desert, California, United States - 15HMC	Environmental	Open in IMG/M
3300034004	Biocrust microbial communities from Mojave Desert, California, United States - 22HNC	Environmental	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034027	Biocrust microbial communities from Mojave Desert, California, United States - 45SNC	Environmental	Open in IMG/M
3300034030	Biocrust microbial communities from Mojave Desert, California, United States - 48SNC	Environmental	Open in IMG/M
3300034173	Biocrust microbial communities from Mojave Desert, California, United States - 21HNC	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034376	Biocrust microbial communities from Mojave Desert, California, United States - 19HNC	Environmental	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M
3300034393	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 10HMS	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12467J12023_10515463	3300000828	Soil	MATLEMVPLRSMMPHTGRVTLRYALPTVRIDVPADPRAAVLPRIATTPQVEQEPEVEAALETTAGKGREAR*
JGI12397J12024_10961092	3300000829	Soil	MGTLEMVPLRSKMPHTGRVTLRYALPTVKIDFPIDTRAGVPRISTTPQVEQPQEGPEPETTARKGGEAR*
JGI12273J12029_100251542	3300000833	Soil	MVTLEMVPLRSKMPHTGRVTLRYALPTVKIDFPIDTRAGLPRIATTPQVEQPQEGPELETTARKGGEAR*
JGI12273J12029_100714063	3300000833	Soil	MATLEMVPLRSMMPHTGRVTLRYALPTVRIDVPADPRVAVLPRIATTPQVEQEPEVEAALETTAGKGREAR*
AP72_2010_repI_A100DRAFT_10681522	3300000837	Forest Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVPGDLSRDERAATLPRIATTPQVEEPAEEADLETTARKGGEAR*
C688J14111_102405771	3300001305	Soil	MVTLDIVPLRSKMPHTGRVTLRYQLPTVKIDVPMDGRAANLPRIATTPQVEEAPEGAELETTARKGGEAR*
C688J18823_101767463	3300001686	Soil	MATLEMIPLRSKMPHTGRVTLRFAVPTLQIDVPADLRAGTPRIATTPQVEEPQSEAALETPAGKGGEAR*
C688J35102_1183328422	3300002568	Soil	MATLEIVQLRSMMPNTGRMTLRYALPTVKIDVPADSRAADLPRIATTPQVEPTASDEAELETTARKGGEAR*
C688J35102_1184898732	3300002568	Soil	MVTLDIVPLRSKMPHTGRVTLRYQLPTIKIDVPVDDRAAKLPRIATTPQVEEQEALETTAGKGGEAR*
C688J35102_1194919332	3300002568	Soil	MATLEMVQLRSMMPHTGRVTLRYALPTVKIDVPADFRAADLPRITTTPQVESPVPDEGELETPAGKGGEAR*
C688J35102_1208006301	3300002568	Soil	MATLEMVPLRSTMPFTGRVTLRYALPTVKIDVPADFRAAELPRVATTPQVEEEPARASVETAVRKGGEAR*
Ga0007412J51696_10683672	3300003573	Avena Fatua Rhizosphere	MVTLDMVPLRSKMPHTGRVTLRYQLPTFKIDVQTDDRAAALPRITTTPQVEPAPEGADVETTARKGGEAR*
JGI25404J52841_100590422	3300003659	Tabebuia Heterophylla Rhizosphere	MVTLDMVPLRSKMPHTGRVTLRYPLPTVKIDVADDVRAARLPRIATTPQVEDDGPGDDAADGSAEAALETTARKGGEAR*
Ga0058689_100465222	3300004016	Agave	MVTLDIVPLRSKMPHTGRVTLRYQLPTIKFDVPGEFDRDDRAADLPRIATTPQVDQAPEGEPVETTAREGGEAR*
Ga0063454_1018842231	3300004081	Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVQTDDRAAALPRITTTPQVEPAPEGADVETTARKGGEAR*
Ga0062595_1009753842	3300004479	Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVPGDTDRDARAAALPRIATTPQVEPAPEGADVETTARKGGEAR*
Ga0058861_116458221	3300004800	Host-Associated	MATLEMVHLRSMMPHTGRVTLRYALPVVKIDVPADFRAADLPRIATTPQVESPVPDEVELETTAGKGGEAR*
Ga0068898_101167171	3300005505	Soil	RGAPMVTLEMVPLRSKMPHTGRVTLRYALPTVKIDFPVDTRAGLPRIATTPQVEQPQEGAELETTARKGGEAR*
Ga0068898_102084883	3300005505	Soil	MVTLEMVPLRSKMPHTGRVTLRYALPAVKIDYPIDTRAGLPRIATTPQVEQPQEGPELETAARKGGEAR*
Ga0068898_102960232	3300005505	Soil	MVTLEMVPLRSKMPHTGRVTLRYALPTVKIDFPIDTRAGVPRISTTPQVEQPQEGPEPETTARKGGEAR*
Ga0068912_110329212	3300005506	Soil	MVTLEMVPLRSKMPHTGRVTLRYALPTVKIDYPIDTRAGLPRIATTPQVEQPQEGPELETAARKGGEAR*
Ga0058697_104560112	3300005562	Agave	MATLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADLRAAGLPRIATTPQVEPAASDEAEPETTAGKGGEAR*
Ga0068856_1000869215	3300005614	Corn Rhizosphere	MATLEMVQLRSMMPHTGRVTLRYALPTVKIDVPADFRAADLPRITTTPQVESPVPDEGELETTAGKGGEAR*
Ga0068852_1009371693	3300005616	Corn Rhizosphere	MATLEMVHLRSMMPNTGRMTLRFALPTVKIDVSNDFRAADLPRITTTPQVEPPVQDEVELETAAGKGGEAR*
Ga0068852_1010798283	3300005616	Corn Rhizosphere	MATLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADFRAELPRIATTPQVEQAPQDGAEPETTAGKGGEAR*
Ga0058704_108299181	3300006020	Agave	MATLEMVPLRSKMPHTGRVTLRYALPTVRIDVPADVRAGLPRIATTPQVEEVPQDGAELETTAGKGGEAR*
Ga0070712_1013400321	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVTLDMIPLRSKMPHTGRVTLRYQLPTITIDVPRDDRAASTPRIATTPQVEEQEALETTAGKGGEAR*
Ga0074057_116847631	3300006605	Soil	VPLRSKMPPTGRVTLRYSFPTITIDVPADDRTAPTTTPRIATTPQVEADGPVDGSVDDTAGADLETTAGKGGEAR*
Ga0079222_101316223	3300006755	Agricultural Soil	MATLEMVHLRSMMPNTGRMTLRFALPTVKIDVSNDFRAADLPRITTTPQVEPPVQDEVELETTAGKGGEAR*
Ga0079220_111142552	3300006806	Agricultural Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVPVDDRAATLPRIATTPQVEEAPEGDALETAARKGGEAR*
Ga0058702_103084012	3300009144	Agave	MATLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADLRAAGLPRITTTPQVEPAASDEAEPETTAGKGGEAR*
Ga0126309_109354372	3300010039	Serpentine Soil	MTTLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADLRAAGLPRIATTPQVEPAASDEAEPETTAGKGGEAR*
Ga0126310_105066722	3300010044	Serpentine Soil	MVTLEMVPLRSKMPHTGRVTLRYALPTVKIDVPADFRAADLPRITTTPQVESPVPDEGELETTARKGGEAR*
Ga0126311_108832722	3300010045	Serpentine Soil	MVTLEMVPLRSKMPHTGRVTLRYALPTIRIDVPADISADLPRIATTPQVEEPQAEADLETAARKGGEAR*
Ga0127431_1153031	3300010063	Grasslands Soil	APAMATLEMVPLRSTMPFTGRVTLRYALPTVKIDVPADLTIDKGAARLPRITTTPQVEEPQDEAALETPARKGGEAR*
Ga0127441_1147203	3300010070	Grasslands Soil	MATLEMVPLRSTMPFTGRVTLRYALPTVKIDAPADFRAAELPRVATTPQVEEEPARASVETAARKGGEAR*
Ga0127441_1300432	3300010070	Grasslands Soil	MATLEIVQLRSMMPNTGRMTLRYALPTVKIDVPADFRAADLPRITTTPQVESPVTDEGELETAAGKGGEAR*
Ga0127441_1388693	3300010070	Grasslands Soil	MVTLDIVPLRSKMPHTGRVTLRYQLPTIKIDVPMDDRAATLPRIATTPQVEEAPEGDALETPARKGGEAR*
Ga0127436_1597932	3300010079	Grasslands Soil	MVTLDIVPLRSKMPHTGRVTLRYQLPTIKIDVPMHDRAATLPRIATTPQVEEAPEGDALETPARKGGEAR*
Ga0127457_10479891	3300010081	Grasslands Soil	MATLEMVSLRSMMPNTGRMTLRFALPTVKIDVPNDFRAADLPRITTTPQVEPPVQDEVELETTAGKGGEAR*
Ga0127478_10531662	3300010083	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTVKIDVPGQLGRDGRAAALPRIVTTPQVEESDQEETLETPAGKGGEAQ*
Ga0127478_10576241	3300010083	Grasslands Soil	MATLEMVQLRSMMPNTGRMTLRYALPTVRIDVPADFRAADLPRITTTPQVEPPVTDEADLETTAGKGGEAR*
Ga0127468_10549472	3300010092	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVPGDVTRDGRAANLPHIATTPQVEEAPEGDTLETTAGKGGEAR*
Ga0127480_11021533	3300010094	Grasslands Soil	MATLDMVPLRSKMPPTGRVTLRYALPTVKIDVPEDVRAARLPRIATTPQVEADDCVDGTADADLETTAGKGGEAR*
Ga0127463_10280762	3300010098	Grasslands Soil	MVTLDIVPLRSKMPHTGRVTLRYQLPTIKIDVPVDDRAAKLPRIATTPQVEEPPQIEEAPETTAGKGGEAR*
Ga0127440_10206122	3300010100	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYQIPTIKIDVPVYGRAADLPHISTTPQVEEPPQIEEAPETTAGKGGEAR*
Ga0127500_11051582	3300010103	Grasslands Soil	MVILDIVPLRSKMPHTGRVTLRYQLPTVKIDVPMDGRAADLPRIATTPQVEEAPDEASLETTAGKGGEAR*
Ga0127438_10922792	3300010121	Grasslands Soil	MATLDMVPLRSKMPPTGRVTLRYALPTVKIDAPADFRAAELLRVATTPQVEEEPARASVETAARKGGEAR*
Ga0127488_10416681	3300010122	Grasslands Soil	LRSMMPNTGRMTLRFALPTVKIDVPNDFRAADLPRITTTPQVEPPVQDEVELETTAGKGGEAR*
Ga0127488_10849481	3300010122	Grasslands Soil	KMPHTGRVTLRYQLPTIKIDVQTDDRAAALPRITTTPQVEPAPEGADVETTARKGGEAR*
Ga0127479_10314281	3300010123	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYALPTVKIDVPADFRAAELPRVATTPQVEEEPARASVETAVRKGGEAR*
Ga0127479_11194432	3300010123	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTVKIDVPMDGRAADLPRIATTPQVEEAPDEASLETTAGKGGEAR*
Ga0127498_10887151	3300010124	Grasslands Soil	MATLEMVPLRSTMPFTGRVTLRYALPTVKIDVPADFRAAELPRVATTPQVEEEPARASVQTAVRKGGEA
Ga0127498_10920962	3300010124	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVPMHDRAATLPRIATTPQVEEAPEGDALETPARKGGEAR*
Ga0127493_11185264	3300010130	Grasslands Soil	MATLEMVQLRSMMPHTGRVTLRYALPTVKIDVPADFRAADLPPIATTPQVEPTASDEAELETT
Ga0127493_11475461	3300010130	Grasslands Soil	KMPHTGRVTLRYQLPTVKIDVPMDDRAADVPRIATTPQVEEVPDGASLETTAGKGGEAR*
Ga0127455_11380582	3300010132	Grasslands Soil	MVTLDIVPLRSKMPHTGRVTLRYQLPTVKIDVPMDGRAADLPRIATTPQVEEAPDEASLETTAGKGGEAR*
Ga0127464_12220773	3300010139	Grasslands Soil	MATLDMVPLRSKMPPTGRVTLRYALPTVKIDVPEDVRAARLPRIATTPQVEADDRVEETADADLETTAGKGGEAQ*
Ga0127499_10494993	3300010141	Grasslands Soil	VMVTLDIVPLRSKMPHTGRVTLRYQLPTIKIDVPMDDRAATLPRIATTPQVEEAPEGDALETPARKGGEAR*
Ga0127499_12392762	3300010141	Grasslands Soil	MATLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADFRAADLPRITTTPQVESPVTDEGELETAAGKGGEAR*
Ga0126320_10229003	3300010146	Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVQTDDRAAALPRITTTPQVEPAPEGADIETTARKGGEAR*
Ga0126320_14324502	3300010146	Soil	MVTLDIVPLRSKMPPTGRVTLRYQLPTVKIDVPMDGRAADLPRIATTPQVEETPDGETPETTARKGGEAR*
Ga0126318_103789413	3300010152	Soil	MATLEMVPLRSKMPHTGRVTLRYALPTVRIDVPADHTAALPRIATTPQVEEAPQEGADLETTARKGGEAR*
Ga0134125_108038253	3300010371	Terrestrial Soil	MATLDMVPLRSMMPPTGRVTLRYALPTVKIDVADDVRAARPPRIATTPQVEDDGPVDDAAPGSAEADLETTARKGGEAR*
Ga0134125_108609482	3300010371	Terrestrial Soil	MMPNTGRMTLRFALPTVKIDVSNDFRAADLPRITTTPQVEPPVQDEVELETAAGKGGEAR
Ga0134126_115719422	3300010396	Terrestrial Soil	MVTLDIVPLRSKMPHTGRVTLRYQLTTIKIDVPGDTDRDARAAALPRIATTPQVEQAPEGADVETTARKGGEAR*
Ga0150985_1079677492	3300012212	Avena Fatua Rhizosphere	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVPMDDPAAKLPRPTTTPQVEEAPEGAALETAARKGGEAR*
Ga0150985_1098667062	3300012212	Avena Fatua Rhizosphere	MVTLDIIPLRSKMPHTGRVTLRYQLPTVKIDVPADFDRDDRAANLPRIATTPQVEEAPDGASPETTARKGGEAR*
Ga0150985_1162987738	3300012212	Avena Fatua Rhizosphere	MATLEMVPLRSTMPFTGRVTLRYALPTVKIDVPADLTIDKGAAPLPRITTTPQVEEPQDEAALETPARKGGEAR*
Ga0134028_12343082	3300012224	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTVKIDVPMDDRAADVPRIATTPQVEEVPDGASLETTAGKGGEAR*
Ga0134039_10765372	3300012374	Grasslands Soil	MATLEMVPLRSTMPFTGRVTLRYALPTVKIDVPADLTIDKGAARLPRITTTPQVEEPQDEAALETPARKGGEAR*
Ga0134033_10815503	3300012383	Grasslands Soil	MATLEMVQLRSMMPHTGRVTLRYALPTVKIDVPADFRAADLPRITTTPQVESPVTDEGELETAAGKGGEAR*
Ga0134036_10732681	3300012384	Grasslands Soil	MVTLDIVPLRSKMPPTGRVTLRYQLPTIKIDVPGDFDRDAPAAALPRIATTPQVEEAPEGADLETTAGKGGEAR*
Ga0134040_11377981	3300012389	Grasslands Soil	MATLEMVPLRSTMPFTGRVTLRYALPTVKIDVPADFRAADLPRITTTPQVESPAPDEGELETAAGKGGEAR*
Ga0134054_10913761	3300012390	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVPMDNRAATLPRIATTPQVEEAPEGDALETPARKGGEAR*
Ga0134035_12305852	3300012391	Grasslands Soil	MVTLDIVPLRSKMPHTGRVTLRYQLPTVKIDVPMDGRAADLPRIATTPQVEEAPEGADLETTAGKGGEAR*
Ga0134052_10622252	3300012393	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTVKIDVPLDGRAADLPRIATTPQVEEAPDEASLETTAGKGGEAR*
Ga0134057_13054752	3300012396	Grasslands Soil	VPLRSKMPHTGRVTLRYQLPTFKIDVPLDGRAANLPHIATTPQVDEAPEGADLETTAGKGGEAR*
Ga0134061_11124291	3300012399	Grasslands Soil	AARRRQEQLVRGIPMATLEMVQLRSMMPHTGRVTLRYALPTVKIDVPADFRAAELPRVATTPQVEEEPTRASVETAARKGGEAR*
Ga0134061_12848811	3300012399	Grasslands Soil	QLVRGVRMATLEIVQLRSMMPNTGRMTLRYALPTVKIDVPADSRAADLPRITTTPQVESPVPDEGELETTAGKGGEAR*
Ga0134049_11414251	3300012403	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTVKIDVPMDDRAADVPRIATTPQVEEVPDGASLETTA
Ga0134049_13075252	3300012403	Grasslands Soil	MATLEMVPLRSMMPHTGRVTLRYALPTVKIDVPADFRAADLPRIATTPQVEPTASDEAELETTARKGGEAR*
Ga0134024_13082673	3300012404	Grasslands Soil	MVTLDIVPLRSKMPHTGRVTLRYQLPTIKIDVPMDGRAAKLPHISTTPQVEEPPQNEEALETTAGKGREAR*
Ga0134045_13380321	3300012409	Grasslands Soil	EQLVRRAPMATLEMVPLRSTMPFTGRVTLRYALPTVKIDVPADFRAAELPRVATTPQVEEEPARASVETAARKGGEAR*
Ga0134060_12717373	3300012410	Grasslands Soil	MVTLDMVPLRSKMPPTGRVTLRYALPTVKIDVPADFRAADLPRITTTPQVESPVPDEGELETTAGKGGEAR*
Ga0150984_1068276362	3300012469	Avena Fatua Rhizosphere	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVQTDDRAAALPRITTTPQVEPAPEGADVETTARKGGEARRR*
Ga0150984_1211561482	3300012469	Avena Fatua Rhizosphere	MATLEMIPLRSKMPHTGLVTLRFAVPTLQIDVPADLRAGTPRIATTPQVEEPQSEAALETPAGKGGEAR*
Ga0157302_105044602	3300012915	Soil	LRSMMPPTGRVTLRYALPTVKIDVADDVRAARPPRIATTPQVEDDGPVDDAAPGSAEADLETTARKGGEAR*
Ga0134076_105258852	3300012976	Grasslands Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVPHDTAAARVPRIRTTPQVEEEPTRASVETAARKGGEAR*
Ga0157371_101059225	3300013102	Corn Rhizosphere	MATLEMIPLRSKMPHTGRVTLRYALPTIQIDVPADFGAGLPRIVTTPQVETPDTESELETTARKGGEAR*
Ga0157375_122016533	3300013308	Miscanthus Rhizosphere	MMPNTGRMTLRFALPTVKIDVSNDFRAADLPRITTTPQVEPPVQDDVELETTAGKGGEAR
Ga0182000_100437772	3300014487	Soil	MATLEMVPLRSKMPPTGRVTLRYALPTVRIDVPTDFSADLPRIATTPQVDEAPQDGAEVETTAGKGGEAR*
Ga0182000_104439852	3300014487	Soil	MATLEMVPLRSKMPHTGRVTLRYALPTVRIDVPADFSAGTPRIVTTPQVEVPQSEAALETPAGKGGEAR*
Ga0182001_101203362	3300014488	Soil	MATLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADLRAAGLPRIATTPQVEPAASDEAELETTAGKGGEAR*
Ga0182008_108386152	3300014497	Rhizosphere	MVTLDIVPLRSKMPHTGRVTLRYQLPTIKIDVPGDTGRDARAAALPRIATTPQVEEAPEGDALETTAGKGGEAR*
Ga0157377_105074672	3300014745	Miscanthus Rhizosphere	MATLEMVPLRSKMPHTGRVTLRYALPTIQIDVPADFGAGLPRIVTTPQVETPDTESELETTARKGGEAR*
Ga0066662_102497103	3300018468	Grasslands Soil	MATLEMVPLRSTMPFTGRATLRYALPTVKIDAPADFRAAELPRVATTPQVEEEPARASVETAARKGGEAR
Ga0193595_11449201	3300018890	Soil	EQLVRGATMVTLEMIPLRSKMPHTGRVTLRYALPTVKIDYPVDTRAGVPRIATTPQVEQPQAEPELETTARKGGEAR
Ga0193607_10459313	3300018892	Soil	MVTLEMIPLRSKMPHTGRVTLRYALPTVKIDYPVDTRAGVPRIATTPQVEQPQAEPELETTARKGGEAR
Ga0193603_11244262	3300018894	Soil	MATLEMVPLRSMMPHTGRVTLRYALPTVRIDVPADPRAAVLPRIATTPQVEQAPEVEAALETTAGKGREAR
Ga0197907_106489753	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MATLEMVHLRSMMPHTGRVTLRYALPVVKIDVPADFRAADLPRIATTPQVESPVPDEVELETTAGKGGEAR
Ga0206352_103909571	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	PHTGRVTLRYALPVVKIDVPADFRAADLPRIATTPQVESPVPDEVELETTAGKGGEAR
Ga0213874_101089413	3300021377	Plant Roots	MATLEMVPLRSTMPFTGRVTLRHALPNVRIDVPADIRAGLPRITTTPQVEEPTEAPELETAAGKGGEAR
Ga0182009_100601183	3300021445	Soil	MATLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADLRAAGLPRIATTPQVEPAASDEAEPETTAGKGGEAR
Ga0182009_100872492	3300021445	Soil	MVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVPGDTGRDARAAALPRIATTPQVEQAPEGADVETTARKGGEAR
Ga0207693_103099733	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTLDMIPLRSKMPHTGRVTLRYQLPTITIDVPRDDRAASTPRIATTPQVEEQEALETTAGKGGEAR
Ga0207640_110603003	3300025981	Corn Rhizosphere	MATLEMVHLRSMMPNTGRMTLRFALPTVKIDVSNDFRAADLPRITTTPQVEPPVQDEVELETAAGKGGEAR
Ga0207678_113900873	3300026067	Corn Rhizosphere	MATLEMVHLRSMMPHTGRVTLRYALPVVKIDVPADFRAADLPRIATTPQVESPVPDEVELETTAGKGG
Ga0207702_110674332	3300026078	Corn Rhizosphere	MATLEMVQLRSMMPHTGRVTLRYALPTVKIDVPADFRAADLPRITTTPQVESPVPDEGELETTAGKGGEAR
Ga0209059_12791962	3300026527	Soil	PMVTLDMVPLRSKMPHTGRVTLRYQLPTIKIDVPEDVRAAALPRIATTPQVEEAPEGAALETTAGKGGEAR
Ga0209795_101737712	3300027718	Agave	KMPPTGRVTLRYALPTIKIDVPEDARAARLPRIATTPQVEPAASDEAEPETTAGKGGEAR
Ga0209574_103392781	3300027809	Agave	MATLEIVQLRSMMPHTGRVTLRYALPTVRIDGPADLRAAGLPRIATTPQVEPAASDEAEPETTAGKGGEAR
Ga0268244_102329843	3300030501	Agave	MATLEMVQLRSMMPHTGRVTLRYALPTVRIDVPADVRAGLPRIATTPQVEEVPQDGAELETTAGKGGEAR
Ga0268243_11414092	3300030510	Soil	MATLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADLRAAGLPRITTTPQVEPAASDEAELETTAGKGGEAR
Ga0268242_10492452	3300030513	Soil	MATLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADVRAAGLPRIATTPQVEPAASDEAEPETTAGKGGEAR
Ga0268254_100641972	3300030515	Agave	MATLEMVPLRSKMPHTGRVTLRYALPTVRIDVPADHRAELPRIATTPQVEPAASDEAEPETTAGKGGEAR
Ga0268255_101734902	3300030516	Agave	LEIVHLRSMMPHTGRVTLRYALPTVKIDVPADLRAAGLPRIATTPQVEPAASDEAEPETTAGKGGEAR
Ga0102770_112293852	3300030981	Soil	MVTLDIVPLRSKMPHTGRVTLRYQLPTIKIDVPVDDRAAKLPRIATTPQVEEQEALETTAGKGGEAR
Ga0308189_104969692	3300031058	Soil	MVTLDIVPLRSKMPPTGRVTLRYQLPTIKIDVPMDERAATLPHIATTPQVEDQEALETAAGKGGEAR
Ga0335082_103798752	3300032782	Soil	MVTLDMVPLRSMMPHTGRVTLRYALPTITLDVPADDRAARLPRIATTPQVEEDCRIDDGVDDTTADAVAADLETTVRKGGEAR
Ga0334909_011872_688_915	3300033988	Soil	MATLEMVPLRSKMPHTGRVTLRYALPVVKIDVPVDQLIRKGAAGLPRIATTPQVEPAAENTAEPETTAGKGGEAR
Ga0334918_014157_453_668	3300034000	Hypolithic Biocrust	MATLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADLRAAGLPRITTTPQVEPAASDEAEPETTAGKGGEAR
Ga0334919_046080_157_372	3300034001	Hypolithic Biocrust	MATLEIVQLRSMMPHTGRVTLRYALPTVKIDVPADLRAARLPRITTTPQVEPAASDEAELETTAGKGGEAR
Ga0334926_024783_431_652	3300034004	Hypolithic Biocrust	MGASMVTLEMVPLRSKMPHTGRVTLRYALPTVKIDFPLDTRAGVPRIATTPQVEQPQEGPELETTARKGGEAR
Ga0334930_031148_104_313	3300034005	Sub-Biocrust Soil	MATLEMVPLRSKMPHTGRVTLRYALPTIRIDVPADLSAGTPRIATTPQVEEPQSEAALETPARKGGEAR
Ga0334936_137514_93_308	3300034007	Biocrust	MATLEMVPLRSKMPHTGRVTLRYALPTVRIDVPADLRAAAMPRITTTPQVEPAASDEAELETTAGKGAEAR
Ga0334944_025101_835_1044	3300034009	Sub-Biocrust Soil	MATLEMVPLRSKMPHTGRVTLRYALPTVRIDVPADFSAALPRIATTPQVEEPQPEADLETPAGKGGEAR
Ga0334949_103450_400_612	3300034027	Biocrust	MVTLEMVPLRSKMPHTGRVTLRYALPTVRIDVPADYRAELPRIATTPQVDQAPQDGADRETTARKGGEAR
Ga0334949_193229_151_366	3300034027	Biocrust	MATLEMVPLRSMMPHTGRVTLRYALPTVRIDIPVDTRAASTPRIATTPQVEQEPAVEAELETTARKGGEAR
Ga0334952_093727_406_615	3300034030	Biocrust	MVTLEMVPLRSKMPHTGRVTLRYALPTVKIDFPVDTRAGVPRIATTPQVEQPQAEPELETTARKGGEAR
Ga0334925_020568_360_569	3300034173	Hypolithic Biocrust	MVTLEMVPLRSKMPHTGRVTLRYALPTVKIDFPVDNRAGTPRIATTPQVEQPQQGSEPETAARKGGEAR
Ga0334937_046588_974_1165	3300034221	Biocrust	MPHTGRVTLRYALPVVKIDVPVDQLIRKGAAGLPRIATTPQVEPAAENTAEPETTAGKGGEAR
Ga0372943_0509770_31_189	3300034268	Soil	VTLRYQVPSVKIDVPTQTKADRVPHISTTPQVEEVPEGAELETTARKGGEAR
Ga0334923_035601_250_459	3300034376	Hypolithic Biocrust	MATLEMVPLRSKMPHTGRVTLRYALPTVKIDFPVDNRAGTPRIATTPQVEQPQQGSEPETAVRKGGEAR
Ga0334917_108092_39_251	3300034391	Hypolithic Biocrust	MATLEMVPLRSKMPHTGRVTLRYALPTVRIDVPADSRAGLPRIATTPQVDQAPQDGADRETTARKGGEAR
Ga0334914_012589_685_912	3300034393	Sub-Biocrust Soil	MATLEMVPLRSKMPHTGRVTLRYALPVVKIDVPVDQLIGKGAAGLPRIATTPQVEPAAENTAEPETTAGKGGEAR
Ga0334960_005247_1170_1382	3300034402	Sub-Biocrust Soil	MATLEMVPLRSKMPHTGRVTLRYALPTVRIDVPADSRAGLPRIATTPQVDQAPQDGADVETTAGKGGEAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056792

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences