Metagenome / Metatranscriptome Family F056765

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056765
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	48 residues
Representative Sequence	VTARRHAQHPGGEPVNAGKPAPVAAKAAAIDAAQARPLTWKSV
Number of Associated Samples	108
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	90.48 %
% of genes near scaffold ends (potentially truncated)	44.53 %
% of genes from short scaffolds (< 2000 bps)	43.80 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (70.073 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.277 % of family members)
Environment Ontology (ENVO)	Unclassified (24.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.715 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.72% β-sheet: 0.00% Coil/Unstructured: 80.28%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF06210	DUF1003	5.84
PF00781	DAGK_cat	4.38
PF04972	BON	1.46
PF01694	Rhomboid	1.46
PF16901	DAO_C	1.46
PF03200	Glyco_hydro_63	0.73
PF00126	HTH_1	0.73
PF00689	Cation_ATPase_C	0.73
PF13649	Methyltransf_25	0.73
PF07077	DUF1345	0.73
PF01594	AI-2E_transport	0.73
PF01381	HTH_3	0.73
PF00067	p450	0.73
PF13515	FUSC_2	0.73
PF03729	DUF308	0.73
PF00196	GerE	0.73
PF00582	Usp	0.73
PF08223	PaaX_C	0.73
PF01297	ZnuA	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	8.76
COG4420	Uncharacterized membrane protein	Function unknown [S]	5.84
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	1.46
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.73
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.73
COG2124	Cytochrome P450	Defense mechanisms [V]	0.73
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.73
COG3327	DNA-binding transcriptional regulator PaaX (phenylacetic acid degradation)	Transcription [K]	0.73
COG4291	Uncharacterized membrane protein	Function unknown [S]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
All Organisms	root	All Organisms	29.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
cellular organisms	root	All Organisms → cellular organisms	29.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.20 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.01 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.01 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.82 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	9.49 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.73 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.73 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	8.76 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	0.73 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	8.76 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.73 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	0.73 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.76 %
Nonomuraea basaltis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	0.73 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	0.73 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.76 %
Eurotiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes	0.73 %
Nonomuraea basaltis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	0.73 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.76 %
Eurotiomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae	0.73 %
Nonomuraea basaltis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	0.73 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.76 %
Eurotiales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales	0.73 %
Nonomuraea basaltis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	0.73 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.76 %
Aspergillaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Aspergillaceae	0.73 %
Nonomuraea basaltis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	0.73 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.07 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.76 %
Aspergillus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Aspergillaceae → Aspergillus	0.73 %
Nonomuraea basaltis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	0.73 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005435\|Ga0070714_100347488	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300006052\|Ga0075029_100855028	Not Available	622	Open in IMG/M
3300006176\|Ga0070765_100529186	Not Available	1109	Open in IMG/M
3300006577\|Ga0074050_12078039	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300009520\|Ga0116214_1344053	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300009523\|Ga0116221_1218354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	825	Open in IMG/M
3300009523\|Ga0116221_1531558	Not Available	516	Open in IMG/M
3300009672\|Ga0116215_1436951	Not Available	566	Open in IMG/M
3300010048\|Ga0126373_13328650	Not Available	500	Open in IMG/M
3300010358\|Ga0126370_11736537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300010366\|Ga0126379_11175592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	873	Open in IMG/M
3300010376\|Ga0126381_104087048	Not Available	567	Open in IMG/M
3300010937\|Ga0137776_1854216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1097	Open in IMG/M
3300012205\|Ga0137362_11123747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	667	Open in IMG/M
3300016319\|Ga0182033_11412737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300016404\|Ga0182037_10504122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1015	Open in IMG/M
3300017821\|Ga0187812_1247326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300017924\|Ga0187820_1076771	Not Available	935	Open in IMG/M
3300017942\|Ga0187808_10494293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300017943\|Ga0187819_10748586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300017946\|Ga0187879_10064069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2142	Open in IMG/M
3300017955\|Ga0187817_10923868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300018058\|Ga0187766_10262514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1108	Open in IMG/M
3300020579\|Ga0210407_11338613	Not Available	533	Open in IMG/M
3300021402\|Ga0210385_11192568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	584	Open in IMG/M
3300021404\|Ga0210389_10575523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	885	Open in IMG/M
3300021405\|Ga0210387_11758022	Not Available	523	Open in IMG/M
3300021475\|Ga0210392_10389998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1013	Open in IMG/M
3300021479\|Ga0210410_10268620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1530	Open in IMG/M
3300021479\|Ga0210410_10923775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300026859\|Ga0207859_1022150	Not Available	547	Open in IMG/M
3300027568\|Ga0208042_1127374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300027903\|Ga0209488_10274806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1261	Open in IMG/M
3300030707\|Ga0310038_10359862	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Aspergillaceae → Aspergillus	642	Open in IMG/M
3300030740\|Ga0265460_11538942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	666	Open in IMG/M
3300031543\|Ga0318516_10405957	Not Available	785	Open in IMG/M
3300031680\|Ga0318574_10002848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6865	Open in IMG/M
3300031748\|Ga0318492_10368803	Not Available	753	Open in IMG/M
3300031771\|Ga0318546_10468940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	882	Open in IMG/M
3300031796\|Ga0318576_10267159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	807	Open in IMG/M
3300031821\|Ga0318567_10288208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300032001\|Ga0306922_10806778	Not Available	981	Open in IMG/M
3300032064\|Ga0318510_10207783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	793	Open in IMG/M
3300032089\|Ga0318525_10535695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300032160\|Ga0311301_10940023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1156	Open in IMG/M
3300032160\|Ga0311301_11591035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	796	Open in IMG/M
3300032180\|Ga0307471_100657211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1211	Open in IMG/M
3300032783\|Ga0335079_10632317	Not Available	1126	Open in IMG/M
3300032828\|Ga0335080_10300705	Not Available	1742	Open in IMG/M
3300032828\|Ga0335080_10681356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1073	Open in IMG/M
3300032828\|Ga0335080_10880984	Not Available	919	Open in IMG/M
3300032828\|Ga0335080_11568371	Not Available	649	Open in IMG/M
3300032892\|Ga0335081_10068698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5432	Open in IMG/M
3300032892\|Ga0335081_11528771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	737	Open in IMG/M
3300032892\|Ga0335081_12550403	Not Available	526	Open in IMG/M
3300032896\|Ga0335075_10513729	Not Available	1219	Open in IMG/M
3300032897\|Ga0335071_10400371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1326	Open in IMG/M
3300032897\|Ga0335071_11483838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	622	Open in IMG/M
3300032898\|Ga0335072_10410533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1448	Open in IMG/M
3300032954\|Ga0335083_10608525	Not Available	899	Open in IMG/M
3300032954\|Ga0335083_11230847	Not Available	579	Open in IMG/M
3300033158\|Ga0335077_10968685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300033412\|Ga0310810_10765321	Not Available	881	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.27%
Host-Associated	Host-Associated	0.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.75%
Aquatic	Environmental → Aquatic	17.52%
Plants	Host-Associated → Plants	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.75%
Freshwater	Environmental → Aquatic → Freshwater	14.60%
Sediment	Environmental → Aquatic → Sediment	2.19%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.87%
Loam	Environmental → Terrestrial → Soil → Loam	4.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.19%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.73%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	10.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.19%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.73%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.28%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	15.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	10.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.19%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.19%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.46%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.73%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26341J46601_101075021	3300003219	Bog Forest Soil	VRSRLSRMDDVTASGHSEHPGGKPAGAGKPAPVAAKAAAIDAAQAHP
Ga0062386_1008574861	3300004152	Bog Forest Soil	VRSRLSRMDDVTASGHSEHPGGKPAGAGKPAPVAAKAAAIDAAQA
Ga0070714_1003474884	3300005435	Agricultural Soil	VTARRHAQHPDGEPVNAGKPAPVAAKAAAIDAAQAHPLTRKTVIMRALAV
Ga0075029_1001542011	3300006052	Watersheds	MYDVTARRDGQHPGGEPVNAGKSASVAAKAAAIDAAQARPLTWK
Ga0075029_1008550281	3300006052	Watersheds	VLVRLSKVKYDVAASRHSQHRGEEPVGAGTLAPVAAKAAAINAAQAHPLTWKTVVKR
Ga0075017_1012694581	3300006059	Watersheds	MYDVTARRHAQHPDGEPVNAGKSASVAAKAAAIDAAQ
Ga0070765_1005291862	3300006176	Soil	MKYDVAASRHSQHPGGGPVGAGTPAPVAAKAASINAAQAHPLTWKTVVKRALV
Ga0074050_120780392	3300006577	Soil	MYDVTARRDGQHPGGEPVNAGKSASVAAKAAAIDAVQARPLTWKTVVMRALAVAV
Ga0116214_10010381	3300009520	Peatlands Soil	VAASRHSQHPGEGPAGAGPPAPVAAKAAAINAAQAHPLTWKTV
Ga0116214_10084651	3300009520	Peatlands Soil	VKYGVAASRHSQHPGEGPAGAGPPAPVAAKAAAINAAQAHPLTWKTV
Ga0116214_13440532	3300009520	Peatlands Soil	MDDVTASGDSERPGGKPADAGKPAPVAAKAAAIDAAQAHPLTWKTVVKRALAVAVA
Ga0116222_12006143	3300009521	Peatlands Soil	MDDVTARWHAQHPGGEPVNAGKSAPVAAKAAAIDAAQAHPLT
Ga0116221_12183542	3300009523	Peatlands Soil	MYDVTARRHAQHSDGEPVNAGKPAPVAAKAAAIDAAQARPLTWKTVVRRALA
Ga0116221_15315581	3300009523	Peatlands Soil	MYDVTAPRHGQHPGGEPVNAGKSAPVAAKAAAIDAAQARPLTWKTVAKRALA
Ga0116215_14369511	3300009672	Peatlands Soil	MDDVTARRDGQHPGGEPVNAGKSAPVAAKAAAIDAAQAHPLTWKTVVKRALAVA
Ga0116217_101774643	3300009700	Peatlands Soil	MDEVAAGAHSEHRGEEPADAGKPAPVAAKAAAIDAAQARPL
Ga0116219_105654531	3300009824	Peatlands Soil	MYDVTARRHAQHPDGEPVNAGKSASVAAKAAAIDAAQARPLTWK
Ga0116219_107830171	3300009824	Peatlands Soil	MYDVTARRDAQHPGGEPVNAGKSASVAAKAAAIDAVQARPLTWKT
Ga0116219_108105231	3300009824	Peatlands Soil	MYDMTARRHAQHPDGEPVNAGKSAPVAAKAAAIDAAQARPLTWKAV
Ga0116223_108879671	3300009839	Peatlands Soil	MYDVTARRDGQHPGGEPVNAGKSVSVAAKAAAIDAAQARPLTWKTVVKRA
Ga0126373_133286501	3300010048	Tropical Forest Soil	MYDVTARRHAQYPDGEPANADRPTPIAAKAAAIDAAQARPLTWKTIVERALAV
Ga0127503_107697612	3300010154	Soil	MSYSVATSRHSQHPGEGPVGAGTPAPVAAKAASINAAQAHPLTWKTIVKRA
Ga0126370_117365371	3300010358	Tropical Forest Soil	VTARRHAEHPDGEPVNAEKPGPVAAKAAAIDAAQARPLTWKTIVKRTLAVAVAG
Ga0126379_111755921	3300010366	Tropical Forest Soil	MNHDVTAGGHSRHPPGGAAGDGKPASVAAKAAAIDAAQARPLTWKTIVKRALVVAVAGVT
Ga0134125_108718581	3300010371	Terrestrial Soil	MYDVTARRDGQHPGGEPVNAGKSAPVAAKAAVIDAA
Ga0126381_1040870481	3300010376	Tropical Forest Soil	MDAVTARRHAQHPDGEPVNAGKHAPVAAKAAAIDAAQA
Ga0137776_18542162	3300010937	Sediment	MDAVTARRDAQHPGGEPVSAGKPAPVAEKAAAIDAAQAHPLTRKIVIMRALAVGVAGA
Ga0137362_111237472	3300012205	Vadose Zone Soil	VKDGVAARRHSQHPDEGPVGAGTPAPVAAKAAAIDAAQAHPLTWKTVVKRALV
Ga0137395_112566141	3300012917	Vadose Zone Soil	MKCNVTKRRHPQHPGVGPVDARQSAPVAAKAAAIDAAQTHPLTWTTA
Ga0164299_111481071	3300012958	Soil	MYDVTARRDGQHPGGEPVNAGKSASVAAKAAAIDAAQA
Ga0126369_129729881	3300012971	Tropical Forest Soil	VTARRHAQHPDGEPVNAGKPGPVAAKAAAIDAAQARPLTWKTVVKR
Ga0132255_1009946121	3300015374	Arabidopsis Rhizosphere	MYEVTARRDGQHPGGEPVNAGKSASVAVKAAAIDAAQARPLTWKTI
Ga0182036_104234013	3300016270	Soil	VTARRDTQRPDGEPVGTGTPAPVAAKAAAIDAAQARPLTWKTV
Ga0182041_110809672	3300016294	Soil	MYDVTARRHAQHPDGEPVNAGQPTPEAAKAAAIDAAQAR
Ga0182033_100913346	3300016319	Soil	VTARRDTQHPDEEPVNAGKPAPVAAKAAAIDAAQARPLTWKTVV
Ga0182033_114127371	3300016319	Soil	VTARRHAQHPDGKPVNVGKPTPVAAKAAAIDAAQARPLTWKSIVKRALAVA
Ga0182035_115533492	3300016341	Soil	MNYHVTAHSHSQRPGAEPAGAGTHASVTAKAAAIDAAQA
Ga0182037_102147833	3300016404	Soil	MDYKATARGRSRHIGGGPADAGQPAAVTAKAAAIDAAQSRPL
Ga0182037_105041222	3300016404	Soil	VTASRRAQDPDGEPANAGKPTPVAAKAAAIDAAQVRPLTWKTIVKRAVAV
Ga0182037_113790152	3300016404	Soil	VTARRHDQHPDGEPANAGKRTSIAAKAAAIDAAQARPLTWK
Ga0182039_101955211	3300016422	Soil	MYDVTARRHAQHPDGKPVNVGKPTPVAAKAAAIDAAQARPLTWKTI
Ga0187812_12473262	3300017821	Freshwater Sediment	VTARRHGQHPGGEPVNAAKPAPVAAKAAAIDAAQARPLTWKSVVKRALAV
Ga0187812_12985991	3300017821	Freshwater Sediment	MYAVMARRHAQQPGGEPVDAGKAAPVAEKAAAIDAAQARPLTW
Ga0187818_104174331	3300017823	Freshwater Sediment	MYDVTARRNAQHPDGEPVNAGKPAPVAAKAAAIDA
Ga0187820_10690013	3300017924	Freshwater Sediment	MYDVTARRHAQHPDGEPASAGKPGPVAAKAAAIDAAQARPLTWK
Ga0187820_10767711	3300017924	Freshwater Sediment	MYDVTARRNAQHPDGEPVNAGKPAPVAAKAAAIDAAQARPLTWKTVVKRALAVAFDAADS
Ga0187814_102389862	3300017932	Freshwater Sediment	VPGGEPFDAGKSSSVAAKAAAIDAAQARPVTWKGVAKR
Ga0187814_103057372	3300017932	Freshwater Sediment	VTARRHAQHPGGEPVNAGKPAPVAAKAAAIDAAQAHPLTWK
Ga0187803_103902521	3300017934	Freshwater Sediment	MYDVTARRHARHPDGEPVNAGKPAPVAAKAAAIDAVQARPLTW
Ga0187808_103727262	3300017942	Freshwater Sediment	MDDVTASGDSERPGGKPADAGKPAPVAAKAAPIDAAQARPLT
Ga0187808_104942931	3300017942	Freshwater Sediment	VTARRHALQPDGEPVNAGKSRPVAEKAAAIDAAQARPLTWQTVVKRALAVAVAGAALYL
Ga0187819_107485861	3300017943	Freshwater Sediment	MYAVTAGRHAQHPDGEPVNAGKSRPVAEKAAAIDAAQARPLTWKTAVKRALA
Ga0187879_100640691	3300017946	Peatland	MYDVTARRHAQHPDGEPVNAGKSASVAAKAAAIDAAQARPLTWKTVVKRAL
Ga0187817_109238681	3300017955	Freshwater Sediment	VTAGRHAQHPDGEPVNAGKSRPVAEKAAAIDAAQARPLTWKTAVKRALAVAV
Ga0187778_101171651	3300017961	Tropical Peatland	VTARRHAQRPDGEPVNAGKSTAVAAKAAAIDAVQAHPLTWKIVVKRALA
Ga0187776_111376442	3300017966	Tropical Peatland	VTARRHAQRPDGEPVNAGTPAPVAVKAAAIDAAQARPLT
Ga0187780_103288121	3300017973	Tropical Peatland	MMDDVTAGRHSEHSGGAPVDAAKSVPVAAKAAAIDAAQARP
Ga0187782_116465811	3300017975	Tropical Peatland	MYGVTVRGHHQHPDGESADAGKPAPVAAKAAAIDAAQARPLT
Ga0187816_103348271	3300017995	Freshwater Sediment	VTARRRAQHPDGEPVNAGKSAPVAAKAAAIDAAQARPLTWKT
Ga0187816_104356711	3300017995	Freshwater Sediment	VTARRHAQHPGGEPVNAGKPAPVAAKAAAIDAAQARPLTWKSV
Ga0187855_109225861	3300018038	Peatland	VTARRHAQHPDGEPVNAGKSASVAAKAAAIDAAQARPLTWKT
Ga0187766_102625144	3300018058	Tropical Peatland	VTARRHAQHPDGEPVNAGQPTPLAAKAAAIDAAQAR
Ga0210407_113386132	3300020579	Soil	MYDVTARRDGQHPGGEPVNAGKSASVAVKAAAIDAAQARPLTWKTVVMRALAVAVAG
Ga0210404_101495163	3300021088	Soil	MNYSVATSRHSQHPSEGPVAAGTPAPVASKAAAIDAAQAHPLTWKTLAK
Ga0210405_108613891	3300021171	Soil	MYDVTARRDGQHPGGEPVNAGKSASVAAKAAAIDA
Ga0210393_106367281	3300021401	Soil	MNYSVATSRHSQHPSEGPVAAGTPAPVASKAAAIDAAQAHPLT
Ga0210385_111925681	3300021402	Soil	VATSRHAQHPGEGPVGAGTPTPVAAKAAAINAAQAHPPTWKTLVKRALVVAVAGAAIYLV
Ga0210389_105755232	3300021404	Soil	MNYTVATSRHSQHPGGGSAGAGTPAPVAAKAAAINAAQAHPLTWKTLVKRA
Ga0210387_117580222	3300021405	Soil	MNYSVATSRHSQHPSEGPVAAGTPAPVASKAAAIDAAQAHPLTWKTLAKRALVIVVA
Ga0210384_111795661	3300021432	Soil	MYDVTARRDGQHPGGEPVNAGKSASVAAKAAAIDAAQARP
Ga0210392_103899981	3300021475	Soil	VAANRHSQHSGEEPVGAGTLAPVAAKAAAINAAQEHSLTWKTVVKRALVVA
Ga0210410_102686205	3300021479	Soil	VAASRHSQHPGEEPFDAGAPAPVAAKAAAINAAQAHPLTWKTVVKRAL
Ga0210410_109237751	3300021479	Soil	MYDVTARRDGQHPGGEPVNAGKSASVAAKAAAIDAAQARPLTWKTVVMRAL
Ga0242653_10603421	3300022712	Soil	MNYSVATSRHSQHPGEGPVDAGTSAPVAAKAASIDAAQAHPASWKT
Ga0207664_105387102	3300025929	Agricultural Soil	VTARRHAQHPDGEPVNAGKPAPVAAKAAAIDAAQAHPLTRKTVIMR
Ga0207665_107607423	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTARRDGQHPGGEPVNAGKSASVAAKAAAIDAAQARP
Ga0207859_10221502	3300026859	Tropical Forest Soil	VTARRHAQRPDGEPVDAGKPAPVAAKAAAIDAAQARPLTWKTVVRRALAIAVA
Ga0208042_11273742	3300027568	Peatlands Soil	VTARWHAQHPGGEPVNAGKSAPVAAKAAAIDAAQAHPLTWKTVVKRALAVAVA
Ga0207862_12532621	3300027703	Tropical Forest Soil	VTARRHAQHPDGKPVNVGKPTPVAAKAAAIDAAQARP
Ga0209040_101290161	3300027824	Bog Forest Soil	VTASGHSEHPGGKPAGAGKPAPVAAKAAAIDAAQAHPLTWKTV
Ga0209488_102748061	3300027903	Vadose Zone Soil	MKCNVTERRHPQHPGVGPVDARQSAPVAAKAAAIDAAQTHPLTWKTVVKRVLVVAVAGAAIYLVL
Ga0310037_100048581	3300030494	Peatlands Soil	VAASRHSQHPGEGPAGAGPPAPVAAKAAAINAAQAHPLTW
Ga0310037_102245252	3300030494	Peatlands Soil	MTARRHAQHPDGEPVNAGKSAPVAAKAAAIDAAQARPLTWKAVVKRAL
Ga0310037_103782581	3300030494	Peatlands Soil	VTARRDGQHPGGEPVNAGKSASVAAKAAAIDAAQARPLTWKTVVK
Ga0310039_100208551	3300030706	Peatlands Soil	MYDVTARRHAQHSDGEPVNAGKPAPVAAKAAAIDAAQARPLTWNTA
Ga0310038_103598621	3300030707	Peatlands Soil	VAASRNSQHPGDGPVGAGTPAPVAAKAAAINAAQARPLTWKTLVKRALVVAV
Ga0265460_115389421	3300030740	Soil	MNYTVATSRHSQHPGGGPAGAGTSAPVAAKAAAINAAQAHPLTWKTLVKRALV
Ga0318516_104059571	3300031543	Soil	MYDVAARRHTQHPDGEPVNARKPAPAAAKAAAIDAAQARPLTWKAVVKRALA
Ga0318528_105627062	3300031561	Soil	MYDVTARRHTQHSDGEPVNAGKPAPVAAKAAAIDAAQARPL
Ga0318574_100028481	3300031680	Soil	MNDHVTAHRHSQHPGPGPADAGKHASVAAKAAAIDAAQARPLTWKNVVRQAVVVAVA
Ga0318574_104545641	3300031680	Soil	VTARRHAQHPDGEPVDAGKHAPVAAKAAAIDAAQA
Ga0318572_102810733	3300031681	Soil	VTARRDTQRPDGEPVGTGTPAPVAAKAAAIDAAQARPLTWKT
Ga0318496_104001301	3300031713	Soil	VTARRHDQHPDGEPVDASKSRSVMQKAAAIDAAQARPLTWQTAVKR
Ga0318492_103688031	3300031748	Soil	VTARRHDQHPDGEPVDASKSRSVMQKAAAIDAAQARPLTWQTAVKRALAVAVAGAGIYLVLPKL
Ga0318546_104689402	3300031771	Soil	MNDHVTAHRHSQHPGPGPADAGKHASVAAKAAAIDAAQARPLTWKNVVRQAV
Ga0318576_102671591	3300031796	Soil	MYDVTARRDTQHPDEEPVNAGKPAPVAAKAAAIDAAQARPLTWKTVVKRALAV
Ga0318567_102882083	3300031821	Soil	VTARRHAQYPDGEPANADRPTPVAAKAAAIDAAQARPLSWKTIVKRALAVAVAGVALYLVLPA
Ga0318499_103030221	3300031832	Soil	MYDVTARRDTQHPDEEPVNAGKPAPVAAKAAAIDAAQARPLTWKTVVKRA
Ga0318512_104558681	3300031846	Soil	MYDVTARRDTQRPDGEPVGTGTPAPVAAKAAAIDAAQARP
Ga0318495_101967781	3300031860	Soil	MYDVTARRHAQHPDGKPVNVGKPTPVAAKAAALDAAQARPLTWKS
Ga0318544_102799663	3300031880	Soil	MYDVTARRHAQHPDGKPVNVGKPTPVAAKAAAIDAAQARPLTG
Ga0318536_103062722	3300031893	Soil	MNYDVTARGHSQHPNGGAAGAGKPASVAAKAAAIDAARPR
Ga0318551_104490491	3300031896	Soil	MYDVTARRDTQRPDGEPVGTGKPAPVAAKAAAIDAAQARPL
Ga0310916_102813134	3300031942	Soil	MYDVTARRHAQHPDGKPVNVGKPTPVAAKAAAIDAAQARPLTWKTIVKR
Ga0318531_101960242	3300031981	Soil	VTARRHDQHLDGEPVNAGKPAPVAAKAAAIDAAQARPLTWKTVVKRA
Ga0306922_108067782	3300032001	Soil	VTARRHDQHPDGEPVNAGKSRPVAEKAAAIDAAQARPLTGKTVVKRALAIAVAGAGIYLVLPKLMA
Ga0318505_104102312	3300032060	Soil	MYDVTARRDTQHPDEEPVNAGKPAPVAAKAAAIDAA
Ga0318510_102077832	3300032064	Soil	MNDHVTAHRHSQHPGPGPADAGKHASVAAKAAAIDAAQARPLTWKNVVRQAVVVAV
Ga0318514_107082002	3300032066	Soil	VTASRRAQDPDGEPANAGKPTPVAAKAAAIDAAQARPLTWKTIVTR
Ga0318525_105356953	3300032089	Soil	VTARRHAQHPDGEPVNVGQPAPVAAKAAAIDAAQARPLTWKTIVKRALAVAVAGVA
Ga0318518_106999911	3300032090	Soil	MNYYVTSDSHSQHPGAGPAGAGTHASVTAKAAAIDAAQARPITWKNIVRQAVVVAVAG
Ga0311301_109400231	3300032160	Peatlands Soil	VKYGVAASRHSQHRGEEPVGAGTPAPVAAKAAAINAAQAHPLTWKTVVKRALVLAVAG
Ga0311301_115910351	3300032160	Peatlands Soil	VTAHRDGQHPGGEPVKAGKSAPVAAKAAAIDAAQARPLTWKTVAKRAL
Ga0311301_122274342	3300032160	Peatlands Soil	MYDVTARRDGQHPGGEPVNAGKSASVAAKAAAIDAAQARPLTW
Ga0307470_106233733	3300032174	Hardwood Forest Soil	MYDVTARRDGQHPGGEPVNAGKSAPVAAKAAVIDAAQARPLT
Ga0307471_1006572112	3300032180	Hardwood Forest Soil	VAASRHSQHPGEGPVGAGTSAPVAAKAAAINAAQAHPLTWKTVVKRALVVAV
Ga0306920_1013123531	3300032261	Soil	MNYHVTAHSHSQHPGAGPAGAGTHASVTAKAAAIDAAQARPITWKNIVR
Ga0335082_109678352	3300032782	Soil	VTARRHAQRPDGEPVNAGKSTAVAAKAAAIDAVQARPLT
Ga0335079_106323172	3300032783	Soil	MYGVTVRRHAQQPAGEPVNAGKPGPVAAKAAAIDAAQARPLTWKTVVKRALAVAVAGVAIYLVLPKLIAVLGA
Ga0335078_101305485	3300032805	Soil	VTARRHAQHPDGEPVNTGKPAPVAEKAAAIDAAQAHP
Ga0335080_103007054	3300032828	Soil	MYDVTVRRHAQQPAGEPVNAGKPGPVAAKAAAIDAAQARPLTWKTVVKRALAV
Ga0335080_106813562	3300032828	Soil	MDGVTARRHAQHPDGEPVNTGKPAPVAAKAAAIDAAQAHPLTRKTVITRALAVAVA
Ga0335080_108809841	3300032828	Soil	VTARRHPQHPDGEPVNTGKPAPVAEKAAAIDAAQAHPLTRKTVIMRVLAIAVAGVALYLVLPKL
Ga0335080_115683713	3300032828	Soil	MYGVTVRRHAQQPAGEPVNAGKPGPVAAKAAAIDAAQARPLTWKTVVKRALAVAVAGVA
Ga0335081_100686986	3300032892	Soil	MYGVTVHRHAQQPAGEPVNAGKPGPVAAKAAAIDAAQARPLTWKTVVKRALAVAVAGVAIYLVLPKLIAVLGA
Ga0335081_115287711	3300032892	Soil	VTARRHAQHPDEEPVNTGKPAPVAEKAAAIDAAQAHPLTRKTVIMR
Ga0335081_125504031	3300032892	Soil	VTARRHAQHPDGEPVNTGKPAPVAAKAAAIDAAQAHPLTRKTVIMRVLAVAVAGVALYLVLP
Ga0335075_105137292	3300032896	Soil	VVREQSPHPGPGPPGAPGSAPVAATAASIDAAQAHPLTWKNVVKRAVVVVVAGVAFYL
Ga0335071_104003711	3300032897	Soil	MDGVTARRHPQHPDGEPVNTGKPAPVAEKAAAIDAAQA
Ga0335071_108197051	3300032897	Soil	MYDVTARRHDQHPDGEPVNAGKSRPVAAKAAAIDAAQARPLTWKTVVK
Ga0335071_114838382	3300032897	Soil	VTARRHPQHPDGEPVNTGKPAPVAEKAAAIDAAQAHPLTRKTVIMRALAIAVAGVALYLVLPKLIAVLG
Ga0335072_104105331	3300032898	Soil	MTARRDSPHPRGTPLDAGKPAPVAAQAAAIDAEQAHPLTWKTVVKRALAVAA
Ga0335083_106085252	3300032954	Soil	VTARRDARHPDGEPVSAGTPAPVAEKAAAIDAAQAHPLTRKTVIMRALAAAV
Ga0335083_112308471	3300032954	Soil	VTARGHAQHPDGEPVNAGKPAPVAEKAAAIDAAQAHPLTRKTVIMRALA
Ga0335077_109686851	3300033158	Soil	VTARRHAQHPDGEPVNTGKPAPVAAKAAAIDAAQAHPLTRKTVITRAL
Ga0335077_116611582	3300033158	Soil	MDAVTARRHAQHPDGEPGSTGKPAPVAEKAAAIDAAQAHPL
Ga0310810_107653211	3300033412	Soil	VTARRHAQHPDGEPVDAGKPAPVAAKAAAIDAAQAHPLTRKTVIMRALAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056765

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences