Metagenome / Metatranscriptome Family F056739

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056739
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	55 residues
Representative Sequence	RITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Number of Associated Samples	107
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.67 %
% of genes near scaffold ends (potentially truncated)	89.78 %
% of genes from short scaffolds (< 2000 bps)	89.05 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.394 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (18.978 % of family members)
Environment Ontology (ENVO)	Unclassified (79.562 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (71.533 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.69% β-sheet: 0.00% Coil/Unstructured: 78.31%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00557	Peptidase_M24	86.86
PF01435	Peptidase_M48	8.03
PF01336	tRNA_anti-codon	2.19
PF04367	DUF502	1.46
PF00152	tRNA-synt_2	0.73
PF10947	DUF2628	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2928	Uncharacterized membrane protein	Function unknown [S]	1.46
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.73
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.73
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.73
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.39 %
Unclassified	root	N/A	41.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.39 %
Unclassified	root	N/A	41.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.39 %
Unclassified	root	N/A	41.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	24.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.61 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	17.52 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.61 %
Candidatus Pseudothioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus	12.41 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	3.65 %
Halomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae	1.46 %
sulfur-oxidizing symbionts	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.61 %
Candidatus Pseudothioglobus singularis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	12.41 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	3.65 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	1.46 %
Candidatus Ruthia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → Candidatus Ruthia	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.61 %
Candidatus Pseudothioglobus singularis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	12.41 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	3.65 %
Candidatus Ruthia magnifica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → Candidatus Ruthia → Candidatus Ruthia magnifica	1.46 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	1.46 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000140\|LPfeb09P26500mDRAFT_c1015164	Not Available	905	Open in IMG/M
3300000152\|LPjun08P12500mDRAFT_c1014369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1354	Open in IMG/M
3300000215\|SI53jan11_120mDRAFT_c1003979	All Organisms → cellular organisms → Bacteria → Proteobacteria	4910	Open in IMG/M
3300000238\|SI36aug09_100mDRAFT_1016409	Not Available	1024	Open in IMG/M
3300000239\|SI36aug09_120mDRAFT_1032432	Not Available	1137	Open in IMG/M
3300000239\|SI36aug09_120mDRAFT_1033034	Not Available	1119	Open in IMG/M
3300000239\|SI36aug09_120mDRAFT_1044016	Not Available	886	Open in IMG/M
3300001347\|JGI20156J14371_10116407	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300002153\|JGI24540J26637_10197104	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300003269\|JGI26112J46591_1016709	Not Available	953	Open in IMG/M
3300003494\|JGI26240J51127_1042601	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300003500\|JGI26242J51144_1032494	Not Available	912	Open in IMG/M
3300003584\|JGI26254J51713_1068387	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300003588\|JGI26247J51722_1004630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → Candidatus Ruthia → Candidatus Ruthia magnifica	4692	Open in IMG/M
3300003588\|JGI26247J51722_1066799	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300003618\|JGI26381J51731_1004389	All Organisms → cellular organisms → Bacteria	5249	Open in IMG/M
3300003619\|JGI26380J51729_10000701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → Candidatus Ruthia → Candidatus Ruthia magnifica	16967	Open in IMG/M
3300004278\|Ga0066609_10107499	Not Available	916	Open in IMG/M
3300005424\|Ga0066826_10053395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1540	Open in IMG/M
3300005429\|Ga0066846_10018459	Not Available	2629	Open in IMG/M
3300005941\|Ga0070743_10183359	Not Available	690	Open in IMG/M
3300006190\|Ga0075446_10133621	Not Available	713	Open in IMG/M
3300006190\|Ga0075446_10159834	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300006191\|Ga0075447_10027120	Not Available	2225	Open in IMG/M
3300006191\|Ga0075447_10070674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1248	Open in IMG/M
3300006191\|Ga0075447_10071303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1241	Open in IMG/M
3300006352\|Ga0075448_10059586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1215	Open in IMG/M
3300006947\|Ga0075444_10102066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1254	Open in IMG/M
3300006947\|Ga0075444_10313515	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300007514\|Ga0105020_1369111	Not Available	865	Open in IMG/M
3300007667\|Ga0102910_1020319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1495	Open in IMG/M
3300007718\|Ga0102852_1046370	Not Available	822	Open in IMG/M
3300007758\|Ga0105668_1080473	All Organisms → cellular organisms → Bacteria → Proteobacteria	1482	Open in IMG/M
3300008224\|Ga0105350_10278386	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300008253\|Ga0105349_10114861	Not Available	1126	Open in IMG/M
3300008995\|Ga0102888_1095751	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009003\|Ga0102813_1166417	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300009052\|Ga0102886_1121770	Not Available	786	Open in IMG/M
3300009055\|Ga0102905_1002689	Not Available	3107	Open in IMG/M
3300009193\|Ga0115551_1356265	Not Available	633	Open in IMG/M
3300009420\|Ga0114994_10032061	Not Available	3671	Open in IMG/M
3300009445\|Ga0115553_1321224	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300009495\|Ga0115571_1104472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1225	Open in IMG/M
3300009526\|Ga0115004_10225266	Not Available	1120	Open in IMG/M
3300009705\|Ga0115000_10926283	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012413\|Ga0138258_1242479	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012417\|Ga0138262_1127012	Not Available	796	Open in IMG/M
3300012418\|Ga0138261_1192227	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300014973\|Ga0134293_1020697	Not Available	835	Open in IMG/M
3300020396\|Ga0211687_10173660	Not Available	882	Open in IMG/M
3300020431\|Ga0211554_10416418	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300021085\|Ga0206677_10135210	Not Available	1118	Open in IMG/M
3300021185\|Ga0206682_10219006	Not Available	859	Open in IMG/M
3300021342\|Ga0206691_1073508	Not Available	803	Open in IMG/M
3300021345\|Ga0206688_10465151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	667	Open in IMG/M
3300021375\|Ga0213869_10088436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1528	Open in IMG/M
3300021375\|Ga0213869_10468998	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300021389\|Ga0213868_10289054	Not Available	943	Open in IMG/M
3300021957\|Ga0222717_10351193	Not Available	828	Open in IMG/M
(restricted) 3300022931\|Ga0233433_10098163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	1437	Open in IMG/M
(restricted) 3300022931\|Ga0233433_10187597	Not Available	916	Open in IMG/M
(restricted) 3300022933\|Ga0233427_10057880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	2016	Open in IMG/M
(restricted) 3300024252\|Ga0233435_1165847	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300024293\|Ga0228651_1037521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	1184	Open in IMG/M
(restricted) 3300024327\|Ga0233434_1303922	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300024332\|Ga0228659_1096321	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300024420\|Ga0228632_1028376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	1298	Open in IMG/M
3300024420\|Ga0228632_1107448	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300025656\|Ga0209054_1207034	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300025667\|Ga0209043_1182490	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300025688\|Ga0209140_1123154	Not Available	780	Open in IMG/M
3300025700\|Ga0209661_1165871	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300025729\|Ga0209558_1005762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	6756	Open in IMG/M
3300026209\|Ga0207989_1016982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	2422	Open in IMG/M
3300026256\|Ga0208639_1044276	Not Available	1267	Open in IMG/M
3300026269\|Ga0208766_1021790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	2346	Open in IMG/M
3300026449\|Ga0247593_1042385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	896	Open in IMG/M
3300026517\|Ga0228607_1101521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	718	Open in IMG/M
3300027298\|Ga0208970_1084270	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300027413\|Ga0208950_1093633	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300027668\|Ga0209482_1071681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1186	Open in IMG/M
3300027668\|Ga0209482_1096657	Not Available	955	Open in IMG/M
3300027672\|Ga0209383_1047075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1638	Open in IMG/M
3300027672\|Ga0209383_1068889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1261	Open in IMG/M
3300027672\|Ga0209383_1093902	Not Available	1015	Open in IMG/M
3300027672\|Ga0209383_1206797	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300027686\|Ga0209071_1024228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1917	Open in IMG/M
3300027686\|Ga0209071_1029680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1713	Open in IMG/M
3300027686\|Ga0209071_1087574	Not Available	918	Open in IMG/M
3300027686\|Ga0209071_1101051	Not Available	844	Open in IMG/M
3300027686\|Ga0209071_1182118	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300027704\|Ga0209816_1113548	Not Available	1031	Open in IMG/M
3300027704\|Ga0209816_1201377	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300027714\|Ga0209815_1162372	Not Available	707	Open in IMG/M
3300027813\|Ga0209090_10570543	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300028008\|Ga0228674_1083405	Not Available	1139	Open in IMG/M
3300028008\|Ga0228674_1156891	Not Available	754	Open in IMG/M
3300028130\|Ga0228619_1098384	Not Available	703	Open in IMG/M
3300028175\|Ga0257117_1062060	Not Available	964	Open in IMG/M
3300028190\|Ga0257108_1170975	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300028194\|Ga0257106_1067082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1326	Open in IMG/M
3300028279\|Ga0228613_1138347	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300031141\|Ga0308021_10098175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1178	Open in IMG/M
3300031510\|Ga0308010_1045502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1811	Open in IMG/M
3300031598\|Ga0308019_10320584	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031599\|Ga0308007_10122509	Not Available	943	Open in IMG/M
3300031621\|Ga0302114_10246419	Not Available	726	Open in IMG/M
3300031623\|Ga0302123_10121376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1373	Open in IMG/M
3300031628\|Ga0308014_1087511	Not Available	733	Open in IMG/M
3300031629\|Ga0307985_10217795	Not Available	752	Open in IMG/M
3300031630\|Ga0308004_10401145	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031655\|Ga0308018_10261066	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300031660\|Ga0307994_1131641	Not Available	856	Open in IMG/M
3300031696\|Ga0307995_1114805	Not Available	1034	Open in IMG/M
3300031702\|Ga0307998_1135226	Not Available	881	Open in IMG/M
3300031757\|Ga0315328_10535466	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300031773\|Ga0315332_10413522	Not Available	859	Open in IMG/M
3300031851\|Ga0315320_10048753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	3312	Open in IMG/M
3300031851\|Ga0315320_10327563	Not Available	1084	Open in IMG/M
3300031851\|Ga0315320_10603851	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300032011\|Ga0315316_10583047	Not Available	935	Open in IMG/M
3300032011\|Ga0315316_10800139	Not Available	777	Open in IMG/M
3300032019\|Ga0315324_10367932	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300032032\|Ga0315327_10557427	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300032032\|Ga0315327_10707937	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300032047\|Ga0315330_10465049	Not Available	769	Open in IMG/M
3300032047\|Ga0315330_10886582	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300032073\|Ga0315315_10229345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1732	Open in IMG/M
3300032073\|Ga0315315_10719890	Not Available	913	Open in IMG/M
3300032073\|Ga0315315_11904731	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300032360\|Ga0315334_10235097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	1501	Open in IMG/M
3300032360\|Ga0315334_10857772	Not Available	786	Open in IMG/M
3300032360\|Ga0315334_11743779	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300034695\|Ga0372840_146392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	705	Open in IMG/M
3300034695\|Ga0372840_234822	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	32.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	32.12%
Oceanic	Environmental → Aquatic → Marine → Oceanic	16.06%
Coastal	Environmental → Aquatic → Marine → Coastal	11.68%
Inlet	Environmental → Aquatic → Marine → Inlet	4.38%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.19%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	32.12%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	28.47%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	13.87%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	11.68%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.38%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.38%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	2.19%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	18.98%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	14.60%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	13.87%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	10.22%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	9.49%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.03%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.38%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	3.65%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.19%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	2.19%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.46%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	1.46%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	1.46%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.73%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.73%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.73%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.73%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.73%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.73%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000140	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2009 P26 500m	Environmental	Open in IMG/M
3300000152	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P12 500m	Environmental	Open in IMG/M
3300000215	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 53 01/11/11 120m	Environmental	Open in IMG/M
3300000238	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 100m	Environmental	Open in IMG/M
3300000239	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 120m	Environmental	Open in IMG/M
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300002153	Marine eukaryotic phytoplankton communities from the Norwegian Sea - 20m ARK-7M Metagenome	Environmental	Open in IMG/M
3300003269	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_08_M0_20	Environmental	Open in IMG/M
3300003494	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_150m_DNA	Environmental	Open in IMG/M
3300003500	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA	Environmental	Open in IMG/M
3300003584	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNA	Environmental	Open in IMG/M
3300003588	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_100m_DNA	Environmental	Open in IMG/M
3300003618	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_165m_DNA	Environmental	Open in IMG/M
3300003619	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA	Environmental	Open in IMG/M
3300004278	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_150m	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005429	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental	Open in IMG/M
3300007718	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3	Environmental	Open in IMG/M
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300008224	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1E Hudson Canyon	Environmental	Open in IMG/M
3300008253	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1B Hudson Canyon	Environmental	Open in IMG/M
3300008995	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3	Environmental	Open in IMG/M
3300009003	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725	Environmental	Open in IMG/M
3300009052	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02	Environmental	Open in IMG/M
3300009055	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-3	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300012413	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012417	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA13.B_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012418	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300014973	Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0116 : 2 days incubation	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021342	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021345	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022931 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MG	Environmental	Open in IMG/M
3300022933 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_100_MG	Environmental	Open in IMG/M
3300024252 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_135_MG	Environmental	Open in IMG/M
3300024293	Seawater microbial communities from Monterey Bay, California, United States - 63D	Environmental	Open in IMG/M
3300024327 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_120_MG	Environmental	Open in IMG/M
3300024332	Seawater microbial communities from Monterey Bay, California, United States - 73D	Environmental	Open in IMG/M
3300024420	Seawater microbial communities from Monterey Bay, California, United States - 40D	Environmental	Open in IMG/M
3300025656	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_200m (SPAdes)	Environmental	Open in IMG/M
3300025667	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025688	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025700	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025729	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_150m_DNA (SPAdes)	Environmental	Open in IMG/M
3300026209	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)	Environmental	Open in IMG/M
3300026256	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76 (SPAdes)	Environmental	Open in IMG/M
3300026269	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 (SPAdes)	Environmental	Open in IMG/M
3300026449	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 56R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026479	Seawater microbial communities from Monterey Bay, California, United States - 26D	Environmental	Open in IMG/M
3300026517	Seawater microbial communities from Monterey Bay, California, United States - 8D	Environmental	Open in IMG/M
3300027298	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C49A8_35 (SPAdes)	Environmental	Open in IMG/M
3300027413	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_54_BLW_10 (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027686	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028130	Seawater microbial communities from Monterey Bay, California, United States - 22D	Environmental	Open in IMG/M
3300028175	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_135m	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300028279	Seawater microbial communities from Monterey Bay, California, United States - 14D	Environmental	Open in IMG/M
3300031141	Marine microbial communities from water near the shore, Antarctic Ocean - #351	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031623	Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1	Environmental	Open in IMG/M
3300031628	Marine microbial communities from water near the shore, Antarctic Ocean - #229	Environmental	Open in IMG/M
3300031629	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031655	Marine microbial communities from water near the shore, Antarctic Ocean - #282	Environmental	Open in IMG/M
3300031660	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #261	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032019	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 21515	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
LPfeb09P26500mDRAFT_10151642	3300000140	Marine	ITMTSSIPDPGIEVSRFNKASGRNLSGTKLLTTSKKNLITRTLKAKGIQNKSPDMK*
LPjun08P12500mDRAFT_10143693	3300000152	Marine	IPDPGIEVSRFNKVSGRNLAGTKLLTTSKKNLITRTLKARGIQNKSPDMK*
SI53jan11_120mDRAFT_10039798	3300000215	Marine	APVMRIIRITKTIPEPGIVVSKLSRDSGRSLFGTRLSTTSKKNLIRSTLSASGIQNKSPDIK*
SI36aug09_100mDRAFT_10164092	3300000238	Marine	TKTIPDPGILVSRLSRDSGRSLVGTRLFTISKKNFIRSTLKASGIQNKSPDIK*
SI36aug09_120mDRAFT_10324323	3300000239	Marine	ITKIIPEPGIVVSRLSRDSGKSLAGTRLLMISKKNLIRSTLRASGIQNKSPDIK*
SI36aug09_120mDRAFT_10330341	3300000239	Marine	MFETTAPVMRIIRITKTIPEPGIVVSRLRSDSGRSLFGTRLSXTSKKNLIRXTLSASGIQNKSPDIK*
SI36aug09_120mDRAFT_10440162	3300000239	Marine	TKTIPDPGIVVSRLSRDSGRSLVGTRLFTISKKNFIRSTLRASGIQNKSPDIK*
JGI20156J14371_101164072	3300001347	Pelagic Marine	MRITRITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK*
JGI24540J26637_101971041	3300002153	Marine	KTIPDPGIVVSRLSRDSGRSLVGTRLFTISKKNLXRSTLRASGIQNKSPDIK*
JGI26112J46591_10167092	3300003269	Marine	TSSIPDPGIEVSRFNKASGRNLAGTKLLTTSKKNLITRTLKAKGIQNKSPDIK*
JGI26240J51127_10426012	3300003494	Marine	EPGIVVSKLSRDSGRSLFGTRLSTTSKKNLIRSTLSASGIQNKSPDIK*
JGI26242J51144_10324941	3300003500	Marine	VSRFNKVSGRNLAGTKLLTTSKKNLITRTLKAKGIQNKSPDMK*
JGI26254J51713_10683871	3300003584	Marine	EPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK*
JGI26247J51722_10046306	3300003588	Marine	MFETTAPVMRIIRITKTIPEPGIVVSKLSRDSGRSLSGTRLSTTSKKNLIRRTLSASGIQNKSPDIK*
JGI26247J51722_10667992	3300003588	Marine	ITKTIPDPGIVVSRFSRDSGRSLVGTRLFTTSKKNLIRSTLRASGIQNKRPDIK*
JGI26381J51731_10043898	3300003618	Marine	RIIRITKTIPEPGIVVSRLRSDSGRSLFGTRLSXTSKKNLIRXTLSASGIQNKSPDIK*
JGI26380J51729_100007014	3300003619	Marine	MFETTAPVMRIIRITKTIPEPGIVVSKLSRDSGRSLFGTRLSTTSKKNLIRSTLSASGIQNKSPDIK*
Ga0066609_101074991	3300004278	Marine	PGIEVSRFNKASGRNLAGTKLLTTSKKNLITRTLKAKGIQNKSPDMK*
Ga0066826_100533953	3300005424	Marine	RITRRTKTIPEPGIVVSRLRSDSGRSLAGTRLLTTSKKNLIRSTLRASGIQNKSPDIK*
Ga0066846_100184591	3300005429	Marine	APVTRITRRTKTIPEPGIVVSRLRSDSGRSLAGTRLLTTSKKNLIRSTLRASGIQNKSPDIK*
Ga0070743_101833592	3300005941	Estuarine	IEVSRFNKASGRNLSGTKLLTTSKKNLITRTLKAKGIQNKSPDIK*
Ga0075446_101336211	3300006190	Marine	ISRIRIINTKPEPGIEVSKLRRASGRNLAGTRLLITSKKNLITRTVNARGIQNKSPDIR*
Ga0075446_101598342	3300006190	Marine	RIINTKPEPGIEVSKLRRASGRNLAGTRLFITSKKNLITKTVNARGIQNKSPEIR*
Ga0075447_100271204	3300006191	Marine	KPEPGIEVSKLRRASGKNLAGTRLLTTSKKNLITKTVNARGIQNKSPDIR*
Ga0075447_100706743	3300006191	Marine	TKPEPGIEVSKLRRASGRNLAGTRLFITSKKNLITRTVNARGIQNKSPDIR*
Ga0075447_100713033	3300006191	Marine	TITKIKPEPGIEVSKLSRASGRSLAGTRLLITSKKNLITRTVNARGIQNKSPDIR*
Ga0075448_100595861	3300006352	Marine	PGIEVSKLRRASGKNLAGTRLLTTSKKNLITKTVNARGIQNKSPDIR*
Ga0075444_101020661	3300006947	Marine	NTKPEPGIEVSKLRRASGRNLAGTRLFITSKKNLITRTVNARGIQNKSPDIR*
Ga0075444_103135151	3300006947	Marine	PEPGIEVSKLRRASGKNLAGTRLLTTSKKNLITKTVNARGIQNKSPDIR*
Ga0105020_13691111	3300007514	Marine	KIITRTRIIPDPGIFVSRLRSDSGKNLAGTILLTTSKKNLITSTLKASGIQNRSPDIK*
Ga0102910_10203193	3300007667	Estuarine	MTSSIPDPGIEVSRFNKASGRNLAGTKLLTTSKKNLITRTLKAKGIQNKSPDMK*
Ga0102852_10463701	3300007718	Estuarine	RIIRITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK*
Ga0105668_10804732	3300007758	Background Seawater	MTSSIPDPGIEVSRFNKVSGRNLAGIKLLTTSKKNLITRTLKARGIQNKSPDMK*
Ga0105350_102783861	3300008224	Methane Seep Mesocosm	SIPDPGIEVSRFNKVSGRNLAGTKLLTTSKKNLITRTLKAKGIQNKSPDMK*
Ga0105349_101148611	3300008253	Methane Seep Mesocosm	IRIMRITKTIPEPGIVVSRLSSDSGRSLVGTRLFTISKKNLIRSTLRASGIQNKSPDIK*
Ga0102888_10957511	3300008995	Estuarine	FVTRAPVIRITRITKTIPDPGIVVSRLSRDSGRSLVGTRLFTISKKNLIRSTLRASGIQNKSPDIK*
Ga0102813_11664171	3300009003	Estuarine	TIPDPGIVVSRLSRDSGRSLVGTRLFTISKKNLIRSTLRASGIQNKSPDIK*
Ga0102886_11217702	3300009052	Estuarine	KTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK*
Ga0102905_10026896	3300009055	Estuarine	ITKTIPEPGIVVSRLRSDSGRSLFGIRLSTTSKKNLIRSTLSASGIQNKSPDIK*
Ga0115551_13562651	3300009193	Pelagic Marine	MRITRITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQN*
Ga0114994_100320611	3300009420	Marine	KTKPDPGIEVSRLRRASGKNLAGTRLFTTSKKNLITMTVKANGIQNKSPDMK*
Ga0115553_13212242	3300009445	Pelagic Marine	KIFVTRAPVIRIMRMTKTIPDPGIDVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK*
Ga0115571_11044721	3300009495	Pelagic Marine	TRAPVMRITRITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK*
Ga0115004_102252662	3300009526	Marine	PVMSRIRTTKTKPEPGIEVFKLRRASGKNLAGTRLLTTSKKNLITKTVNARGIQNKSPDIR*
Ga0115000_109262832	3300009705	Marine	APVIRRIRITKTKPEPGIEVFKLRRVSGKNLAGTRLLTTSKKNLITKTVNARGIQNKSPDIR*
Ga0138258_12424791	3300012413	Polar Marine	PVIRRIRIINTKPEPGIEVSKLSRVSGRSLAGTRLFITSKKNLITRTVNARGIQNKSPDIR*
Ga0138262_11270121	3300012417	Polar Marine	PDPGIGVSKLRRASGKNLAGTRLFTTSKKNLITITVKANGIQNKSPDIK*
Ga0138261_11922271	3300012418	Polar Marine	PEPGIDVSKLRRVSGRNLAGTRLFITSKKNLITRTVNARGIQNKSPDIR*
Ga0134293_10206972	3300014973	Marine	KIFVTRAPVMRITRITKTIPEPGIVVSRLSRDSGRSLVGTRLFTISKKNLIRSTLRASGIQNKSPDIK*
Ga0211687_101736602	3300020396	Marine	TKTKPEPGIEVFKLRRASGKNLAGTRLLTTSKKNLITKTVNARGIQNKSPDIR
Ga0211554_104164181	3300020431	Marine	PGIEVSRFSRDSGSNLAGTRLLTTSKKNFISSTLRASGIQNKSPDIK
Ga0206677_101352102	3300021085	Seawater	TRITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0206682_102190062	3300021185	Seawater	PDPGIVVSRLSRDSGRSLVGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0206691_10735081	3300021342	Seawater	PVMRIIRITKTIPEPGIAVSRLRSDSGRSLFGTRLSTTSKKNLIRSTLSASGIQNKSPDI
Ga0206688_104651511	3300021345	Seawater	GIEVSRFNKVSGRNLAGTKLLTTSKKNLITRTLKAKGIQNKSPDIK
Ga0213869_100884363	3300021375	Seawater	PGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0213869_104689981	3300021375	Seawater	RITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0213868_102890541	3300021389	Seawater	APVIRITRITKTIPDPGIVVSRLSRDSGRSLVGTRLFTISKKNFIRSTLKASGIQNKSPDIK
Ga0222717_103511931	3300021957	Estuarine Water	VIRITRITKTIPDPGIVVSRLSRDSGRSLVGTRLFTISKKNLIRSTLRASGIQNKSPDIK
(restricted) Ga0233433_100981633	3300022931	Seawater	KIFVTRAPVMRITRITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK
(restricted) Ga0233433_101875971	3300022931	Seawater	RPKMFETIAPVMRIIRITKTIPEPGIVVSKLSRDSGRSLSGIRLSTTSKKNLIRRTLSASGIQNKSPDIK
(restricted) Ga0233427_100578803	3300022933	Seawater	TIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK
(restricted) Ga0233435_11658472	3300024252	Seawater	ITKTIPEPGIVVSRLSRDSGRSLVGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0228651_10375211	3300024293	Seawater	TIPDPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK
(restricted) Ga0233434_13039221	3300024327	Seawater	RITKIIPEPGIVVSRLSRDSGKSLAGTRLLMISKKNLIRSTLRASGIQNKSPDIK
Ga0228659_10963211	3300024332	Seawater	PDPGIVVSKLSRDSGSNLVVTKLLTTSKKNLITSTLKANGIQKRSPDIK
Ga0228632_10283763	3300024420	Seawater	KIFVTRAPVIRITRITKTIPEPGIVVSRLSRDSCRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0228632_11074482	3300024420	Seawater	MKITRIIPDPGIVVSKLSRDSGNNLVGTRLLTTSKKNLITSTLKANGIQKRSPDIK
Ga0209054_12070342	3300025656	Marine	SSIPDPGIEVSRFNKVSGRNLAGTKLLTTSKKNLITRTLKAKGIQNKSPDMK
Ga0209043_11824902	3300025667	Marine	RITRITKIIPEPGIVVSRLSRDSGKSLAGTRLLMISKKNLIRSTLRASGIQNKSPDIK
Ga0209140_11231541	3300025688	Marine	DPGIVVSRFSRDSGRSLVGTRLFTTSKKNLIRSTLRASGIQNKRPDIK
Ga0209661_11658712	3300025700	Marine	FVTRAPVIRIIRITKTIPDPGIVVSRFSRDSGRSLVGTRLFTTSKKNLIRSTLRASGIQNKRPDIK
Ga0209558_10057621	3300025729	Marine	RIVRITKTIPEPGIVVSRLRSDSGRSLFGTRLSTTSKKNLIRSTLSASGIQNKSPDIK
Ga0207989_10169824	3300026209	Marine	FVTKAPVTRITRRTKTIPEPGIVVSRLRSDSGRSLAGTRLLTTSKKNLIRSTLRASGIQNKSPDIK
Ga0208639_10442762	3300026256	Marine	IPEPGIVVSRLRSDSGRSLAGTRLLTTSKKNLIRSTLRASGIQNKSPDIK
Ga0208766_10217902	3300026269	Marine	MFVTNAPVTRITRRTKTIPEPGIVVSRLRSDSGRSLAGTRLLTTSKKNLIRSTLRASGIQNKSPDIK
Ga0247593_10423852	3300026449	Seawater	MRITRITKTIPEPGIVVSRLSRDSGRSLVGTRLFTISKKNLIRSTLRASGIQNNSPDIK
Ga0228622_11104882	3300026479	Seawater	SNLRPKIFVTRAPVIRITRITKTIPDPGIVVSRLSRDSGRSLVGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0228607_11015213	3300026517	Seawater	MRITRITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSQD
Ga0208970_10842702	3300027298	Marine	RITRITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0208950_10936332	3300027413	Marine	IAPVMRIIRITKTIPEPGIVVSKLSRDSGRSLSGIRLSTTSKKNLIRSTLSASGIQNKSPDIK
Ga0209482_10716811	3300027668	Marine	EPGIEVSKLRRASGRNLAGTRLFITSKKNLITRTVNARGIQNKSPDIR
Ga0209482_10966571	3300027668	Marine	RRITITKIKPEPGIEVSKLSRASGRSLAGTRLLITSKKNLITKTVNARGIQNKSPDIR
Ga0209383_10470753	3300027672	Marine	EPGIEVSKLSRASGRSLAGTRLLITSKKNLITRTVNARGIQNKSPDIR
Ga0209383_10688893	3300027672	Marine	INTKPEPGIEVSKLRRASGRNLAGTRLFITSKKNLITRTVNARGIQNKSPDIR
Ga0209383_10939021	3300027672	Marine	SITKTKTMPEPGIEVFKLRRASGKNLAGTRLLTTSKKNLITKTVSARGIQNKSPDIR
Ga0209383_12067971	3300027672	Marine	TKPEPGIEVSKLRRASGKNLAGTRLLTTSKKNLITKTVNASGIQNKSPDIR
Ga0209071_10242281	3300027686	Marine	VIRRIKITKIKPEYGIEVSKLSRTSGKNLVGMRLFTTSKKNLITKTVNARGIQNKSPDMR
Ga0209071_10296803	3300027686	Marine	IRRITITKIKPEPGIEVSKLSRASGRSLAGTRLLITSKKNLITRTVNARGIQNKSPDIR
Ga0209071_10875741	3300027686	Marine	VIRRIRITKTKPEPGIEVSKLRRASGKNLSGTRLLTTSKKNLITKTVNASGIQNKSPDIR
Ga0209071_11010511	3300027686	Marine	PVIRRIRITKIKPEPGIEVSKLSRASGRSLAGTRLLITSKKNLITKTVNARGIQNKSPDI
Ga0209071_11821181	3300027686	Marine	IRTTKTKPEPGIEVSKLSRVSGKNLAGTRLLTTSKKNLITKTVNASGIQNKSPDIR
Ga0209816_11135481	3300027704	Marine	MRRIRITKIKPEPGIEVFKLRRASGKNLAGTRLLTTSKKNLITKTVNARGIQNKSPDIR
Ga0209816_12013771	3300027704	Marine	KAPVIRRIRITKIKPEPGIEVSKLSRVSGKNLAGTRLLTTSKKNLITRTVNARGIQNKSPDIR
Ga0209815_11623722	3300027714	Marine	IINTKPEPGIEVSKLSRVSGRSLAGTRLFITSKKNLITRTVNARGIQNKSPDIR
Ga0209090_105705432	3300027813	Marine	GIEVSKLSRVSGRNLAGTRLLTTSKKNLITKTVNASGIQNKSPDIR
Ga0209035_105664752	3300027827	Marine	IVVSRFSRDSGRSLVGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0228674_10834051	3300028008	Seawater	PVIRITRITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDI
Ga0228674_11568911	3300028008	Seawater	IFVARAPVIRITRITKTIPDPGIVVSRLSRDSGRSLVGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0228619_10983842	3300028130	Seawater	TKTIPDPGIVVSRLSRDSGRSLVGTRLFTISKKNFIRSTLKASGIQNKSPDIK
Ga0257117_10620602	3300028175	Marine	IPDPGIEVSRFNKVSGRNLVGMKLLTTSKKNLITRTLKARGIQNKSPDMK
Ga0257108_11709751	3300028190	Marine	SSIPDPGIEVSRFNKASGRNLAGIKLLTTSKKNLITRTLKARGIQNKSPDMK
Ga0257106_10670823	3300028194	Marine	GIVVSIFSKASGRNLAGTRLFTTSKKNLITRTLKAKGIQNKSPDMK
Ga0228613_11383472	3300028279	Seawater	TRIIPDPGIVVSRLSRDSGSNLVGTKLLTTSKKNLITSTLKANGIQKRSPDIK
Ga0308021_100981753	3300031141	Marine	GIEVSKLSRASGRNLAGTRLFITSKKNLITRTVNARGIQNKSPDIR
Ga0308010_10455021	3300031510	Marine	APVIRRIRTTKTMPEPGIEVSKLSRASGRSLAGTRLLTTSKKNLITKTVNASGIQNKSPEIR
Ga0308019_103205842	3300031598	Marine	EPGIEVSKLSRVSGRNLAGTRLFITSKKNLITKTVNARGIQNKSPDIR
Ga0308007_101225092	3300031599	Marine	KPDPGIEVSRFRRASGKNLAGTRLFTTSKKNLITIKVKANGIQNKSPDIK
Ga0302114_102464191	3300031621	Marine	IRRIRITKTKPEPGIEVSKLRRASGKNLSGTRLLTTSKKNLITKTVNASGIQNKSPDIR
Ga0302123_101213763	3300031623	Marine	IPDPGIEVSRFNKVSGRNLAGIKLLTTSKKNLITRTLKARGIQNKSPDMK
Ga0308014_10875111	3300031628	Marine	KPEPGIEVSRLRRASGKNLAGTRLFTTSKKNLITITVKASGIQNKSPDIK
Ga0307985_102177951	3300031629	Marine	SRIRIINTKPEPGIEVSKLSRASGRNLAGTRLFITSKKNLITRTVNARGIQNKSPDIR
Ga0308004_104011452	3300031630	Marine	PGIEVSKLRRASGRNLAGTRLFITSKKNLITKTVKARGIQNKSPDIR
Ga0308018_102610661	3300031655	Marine	IEVSKLRRASGRNLAGTRLFITSKKNLITRTVNARGIQNKSPDIR
Ga0307994_11316412	3300031660	Marine	RIINTKPEPGIEVSKLRRASGRNLAGTRLFITSKKNLITRTVNARGIQNKSPDIR
Ga0307995_11148052	3300031696	Marine	MRRIRTTKTKPEPGIEVFKLRRASGKNLAGTRLLTTSKKNLITKTVNARGIQNKSPDIR
Ga0307998_11352261	3300031702	Marine	RRIRIINTKPEPGIEVSKLSRVSGRSLAGTRLFITSKKNLITRTVNARGIQNKSPDIR
Ga0315328_105354661	3300031757	Seawater	RITKTIPEPGIVVSRLRSDSGRSLFGTRLSTTSKKNLIRSTLSASGIQNKSPDIK
Ga0315332_104135221	3300031773	Seawater	PGIVVSKLSRDSGSNLLGTKLLTTSKKNLITSTLKANGIQKRSPDIK
Ga0315320_100487536	3300031851	Seawater	APVIKIIEITRIIPEPGIVVSKFKRDSGSSLGGTILLTTSKKNLITSKVRTNGIQKRSPDIK
Ga0315320_103275632	3300031851	Seawater	RIIPEPGIVVSKLSRDSGSNLVGTKLLTTSKKNLITSTLKANGIQKRSPDIK
Ga0315320_106038512	3300031851	Seawater	KIFVTRAPVIRITRITKTIPDPGIVVSRFSRDSGRSLVGTRLFTTSKKNLIRSTLRASGIQNKRPDIK
Ga0315316_105830472	3300032011	Seawater	GIVVSRLSSDSGRSLAGTKLLTTSKKNLITSTLNASGIQNRRPDIK
Ga0315316_108001391	3300032011	Seawater	RTSSIPDPGIEVSRFNKASGRNLAGTKLLTTSKKNLITRTLKAKGIQNKSPDIK
Ga0315324_103679322	3300032019	Seawater	PDPGIEVSRFNKVSGRNLAGTKLLTTSKKNLITRTLKAKGIQNKSPDMK
Ga0315327_105574271	3300032032	Seawater	TLRPKIFVTRAPVIRITRITKTIPEPGIVVSRLSRDSGRSLAGTRLFTISKKNLIRSTLRASGIQNKSPDIK
Ga0315327_107079372	3300032032	Seawater	IVVSRLSRDSGSNLVGTKLLTTSKKNLITSTLKANGIQKRSPDIK
Ga0315330_104650492	3300032047	Seawater	LPMIFVTNAPVIRITKITRIIPDPGIVVSKLSRDSGSNLVGTILLTTSKKNLITSTLKANGIQKRSPDIK
Ga0315330_108865822	3300032047	Seawater	IIPEPGIVVSKFKRDSGSSLGGTILLTTSKKNLITSTVRTNGIQKRSPDIK
Ga0315315_102293451	3300032073	Seawater	LVTNAPVIKIIKITRIIPEPGIVVSKFKRDSGSSLGGTKLLTTSKKNLITITLKANGIQKRSPDIK
Ga0315315_107198902	3300032073	Seawater	KITKIIPDPGIVVSKLSRDSGSNLAGTKLLTTSKKNLITSTLKANGIQKRSPDIK
Ga0315315_119047311	3300032073	Seawater	APVIRIIKITRIIPDPGIVVSKLSRDSGSNLVGTKLLTTSKKNLITSTLKANGIQKRSPDIK
Ga0315334_102350973	3300032360	Seawater	TSSIPDPGIEVSRFNKVSGRNLAGTKLLTTSKKNLITRTLKARGIQNKSPDMK
Ga0315334_108577722	3300032360	Seawater	PEPGIAVSRLRSDSGRSLFGTRLSTTSKKNLIRSTLSASGIQNKSPDIK
Ga0315334_117437792	3300032360	Seawater	TSSIPDPGIEVSRFNKVSGRNLAGTKLLTTSKKNLITRTLKAKGIQNKSPDMK
Ga0372840_146392_26_190	3300034695	Seawater	MTSSIPDPGIEVSRFNKVSGRNLAGTKLLTTSKKNLITRTLKARGIQNKSPDMK
Ga0372840_234822_27_191	3300034695	Seawater	MTSSIPDPGIEVSRFNKASGRNLSGTKLLTTSKKNLITRTLKAKGIQNKSPDMK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters