Metagenome / Metatranscriptome Family F056633

Basic Information
Family ID	F056633
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	45 residues
Representative Sequence	MAQKLGIPFTADLLALGSNSAISDALIEKAVAAGKTEAQINDAMASL
Number of Associated Samples	118
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.85 %
% of genes near scaffold ends (potentially truncated)	18.98 %
% of genes from short scaffolds (< 2000 bps)	94.89 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Unclassified (98.540 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (20.438 % of family members)
Environment Ontology (ENVO)	Unclassified (56.934 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (79.562 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.33% β-sheet: 0.00% Coil/Unstructured: 58.67%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF05345	He_PIG	0.73

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
All Organisms	root	All Organisms	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
cellular organisms	root	All Organisms → cellular organisms	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.73 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.73 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
Ciliophora	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	0.73 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.73 %
Intramacronucleata	subphylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
Spirotrichea	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	0.73 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
Oligotrichia	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia	0.73 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
Strombidiidae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae	0.73 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.54 %
Strombidium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium	0.73 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.73 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000130\|SA_S2_NOR15_50mDRAFT_c10067736	Not Available	1397	Open in IMG/M
3300003860\|Ga0031658_1046541	Not Available	745	Open in IMG/M
3300005516\|Ga0066831_10008937	Not Available	2753	Open in IMG/M
3300005838\|Ga0008649_10147328	Not Available	941	Open in IMG/M
3300005941\|Ga0070743_10099311	Not Available	979	Open in IMG/M
3300006029\|Ga0075466_1019196	Not Available	2230	Open in IMG/M
3300006394\|Ga0075492_1489225	Not Available	1074	Open in IMG/M
3300006641\|Ga0075471_10175330	Not Available	1125	Open in IMG/M
3300006803\|Ga0075467_10266653	Not Available	923	Open in IMG/M
3300007231\|Ga0075469_10095687	Not Available	838	Open in IMG/M
3300007513\|Ga0105019_1075247	Not Available	1913	Open in IMG/M
3300007543\|Ga0102853_1022397	Not Available	1042	Open in IMG/M
3300007552\|Ga0102818_1043264	Not Available	889	Open in IMG/M
3300007554\|Ga0102820_1038995	Not Available	1158	Open in IMG/M
3300007665\|Ga0102908_1120631	Not Available	537	Open in IMG/M
3300007667\|Ga0102910_1010789	Not Available	2036	Open in IMG/M
3300007692\|Ga0102823_1047349	Not Available	1154	Open in IMG/M
3300007725\|Ga0102951_1138640	Not Available	686	Open in IMG/M
3300008832\|Ga0103951_10404007	Not Available	727	Open in IMG/M
3300008952\|Ga0115651_1349695	Not Available	866	Open in IMG/M
3300009003\|Ga0102813_1085005	Not Available	1022	Open in IMG/M
3300009071\|Ga0115566_10494553	Not Available	694	Open in IMG/M
3300009077\|Ga0115552_1365813	Not Available	571	Open in IMG/M
3300009154\|Ga0114963_10480640	Not Available	663	Open in IMG/M
3300009172\|Ga0114995_10044688	Not Available	2547	Open in IMG/M
3300009182\|Ga0114959_10212866	Not Available	996	Open in IMG/M
3300009263\|Ga0103872_1029250	Not Available	726	Open in IMG/M
3300009436\|Ga0115008_10114990	Not Available	1984	Open in IMG/M
3300009466\|Ga0126448_1026319	Not Available	1381	Open in IMG/M
3300009466\|Ga0126448_1041976	Not Available	1063	Open in IMG/M
3300009497\|Ga0115569_10410055	Not Available	583	Open in IMG/M
3300009512\|Ga0115003_10842220	Not Available	533	Open in IMG/M
3300009526\|Ga0115004_10045591	Not Available	2833	Open in IMG/M
3300009538\|Ga0129287_10228318	Not Available	808	Open in IMG/M
3300009599\|Ga0115103_1130834	Not Available	743	Open in IMG/M
3300009599\|Ga0115103_1691625	Not Available	1241	Open in IMG/M
3300009608\|Ga0115100_10922192	Not Available	507	Open in IMG/M
3300009677\|Ga0115104_10110068	Not Available	578	Open in IMG/M
3300009679\|Ga0115105_10711145	Not Available	1043	Open in IMG/M
3300009785\|Ga0115001_10138557	Not Available	1589	Open in IMG/M
3300010354\|Ga0129333_11265030	Not Available	611	Open in IMG/M
3300012418\|Ga0138261_1549719	Not Available	584	Open in IMG/M
3300012504\|Ga0129347_1295052	Not Available	825	Open in IMG/M
3300012504\|Ga0129347_1317729	Not Available	553	Open in IMG/M
3300012522\|Ga0129326_1379274	Not Available	651	Open in IMG/M
3300012524\|Ga0129331_1432515	Not Available	864	Open in IMG/M
3300012952\|Ga0163180_11184193	Not Available	623	Open in IMG/M
3300012952\|Ga0163180_11544699	Not Available	556	Open in IMG/M
3300012953\|Ga0163179_11324051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	641	Open in IMG/M
3300012953\|Ga0163179_11330304	Not Available	640	Open in IMG/M
3300012954\|Ga0163111_11187874	Not Available	744	Open in IMG/M
3300012968\|Ga0129337_1031422	Not Available	574	Open in IMG/M
3300012970\|Ga0129338_1254156	Not Available	1016	Open in IMG/M
3300013006\|Ga0164294_10356187	Not Available	1008	Open in IMG/M
3300016734\|Ga0182092_1140888	Not Available	831	Open in IMG/M
3300016740\|Ga0182096_1381257	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium	608	Open in IMG/M
3300016749\|Ga0182053_1062619	Not Available	680	Open in IMG/M
3300016882\|Ga0186577_104922	Not Available	1029	Open in IMG/M
3300017280\|Ga0186684_113240	Not Available	962	Open in IMG/M
3300017735\|Ga0181431_1099497	Not Available	652	Open in IMG/M
3300018410\|Ga0181561_10095332	Not Available	1643	Open in IMG/M
3300018420\|Ga0181563_10407126	Not Available	775	Open in IMG/M
3300018420\|Ga0181563_10734924	Not Available	543	Open in IMG/M
3300018421\|Ga0181592_10272058	Not Available	1235	Open in IMG/M
3300018599\|Ga0188834_1016995	Not Available	757	Open in IMG/M
3300018607\|Ga0188821_1020525	Not Available	612	Open in IMG/M
3300018649\|Ga0192969_1019394	Not Available	1129	Open in IMG/M
3300018692\|Ga0192944_1037420	Not Available	704	Open in IMG/M
3300018725\|Ga0193517_1033316	Not Available	983	Open in IMG/M
3300018765\|Ga0193031_1015384	Not Available	1056	Open in IMG/M
3300018846\|Ga0193253_1055258	Not Available	981	Open in IMG/M
3300018928\|Ga0193260_10040862	Not Available	992	Open in IMG/M
3300018980\|Ga0192961_10168798	Not Available	664	Open in IMG/M
3300018989\|Ga0193030_10052138	Not Available	1105	Open in IMG/M
3300018989\|Ga0193030_10056280	Not Available	1080	Open in IMG/M
3300018989\|Ga0193030_10194548	Not Available	667	Open in IMG/M
3300018989\|Ga0193030_10276203	Not Available	548	Open in IMG/M
3300019004\|Ga0193078_10200692	Not Available	524	Open in IMG/M
3300019031\|Ga0193516_10096172	Not Available	1008	Open in IMG/M
3300019031\|Ga0193516_10314755	Not Available	500	Open in IMG/M
3300019033\|Ga0193037_10209888	Not Available	665	Open in IMG/M
3300019033\|Ga0193037_10298735	Not Available	565	Open in IMG/M
3300019036\|Ga0192945_10091327	Not Available	949	Open in IMG/M
3300019036\|Ga0192945_10093404	Not Available	940	Open in IMG/M
3300019048\|Ga0192981_10126321	Not Available	1010	Open in IMG/M
3300019085\|Ga0188830_1005368	Not Available	939	Open in IMG/M
3300019095\|Ga0188866_1008423	Not Available	994	Open in IMG/M
3300019095\|Ga0188866_1009470	Not Available	955	Open in IMG/M
3300019123\|Ga0192980_1047829	Not Available	817	Open in IMG/M
3300019131\|Ga0193249_1076719	Not Available	794	Open in IMG/M
3300019149\|Ga0188870_10046538	Not Available	1046	Open in IMG/M
3300019149\|Ga0188870_10050141	Not Available	1011	Open in IMG/M
3300019149\|Ga0188870_10069850	Not Available	857	Open in IMG/M
3300019150\|Ga0194244_10041533	Not Available	724	Open in IMG/M
3300019266\|Ga0182061_1357508	Not Available	626	Open in IMG/M
3300020183\|Ga0194115_10393412	Not Available	598	Open in IMG/M
3300021169\|Ga0206687_1781501	Not Available	525	Open in IMG/M
3300021336\|Ga0210307_1079962	Not Available	1930	Open in IMG/M
3300021336\|Ga0210307_1344300	Not Available	910	Open in IMG/M
3300021872\|Ga0063132_117605	Not Available	523	Open in IMG/M
3300021957\|Ga0222717_10692665	Not Available	522	Open in IMG/M
3300021959\|Ga0222716_10386721	Not Available	817	Open in IMG/M
3300021962\|Ga0222713_10149292	Not Available	1614	Open in IMG/M
3300025138\|Ga0209634_1303582	Not Available	547	Open in IMG/M
3300025508\|Ga0208148_1015370	Not Available	2255	Open in IMG/M
3300025869\|Ga0209308_10283238	Not Available	698	Open in IMG/M
3300025879\|Ga0209555_10084413	Not Available	1383	Open in IMG/M
3300025887\|Ga0208544_10113058	Not Available	1209	Open in IMG/M
3300025887\|Ga0208544_10165732	Not Available	937	Open in IMG/M
3300026182\|Ga0208275_1008145	Not Available	2343	Open in IMG/M
3300027159\|Ga0208020_1021346	Not Available	1270	Open in IMG/M
3300027248\|Ga0208176_1014932	Not Available	1065	Open in IMG/M
3300027687\|Ga0209710_1095795	Not Available	1185	Open in IMG/M
3300027708\|Ga0209188_1309387	Not Available	523	Open in IMG/M
3300028110\|Ga0247584_1082831	Not Available	810	Open in IMG/M
3300028134\|Ga0256411_1093975	Not Available	1023	Open in IMG/M
3300028137\|Ga0256412_1287518	Not Available	605	Open in IMG/M
3300028282\|Ga0256413_1291282	Not Available	576	Open in IMG/M
3300028334\|Ga0247597_1053220	Not Available	551	Open in IMG/M
3300028595\|Ga0272440_1118327	Not Available	913	Open in IMG/M
3300030699\|Ga0307398_10209535	Not Available	1035	Open in IMG/M
3300030702\|Ga0307399_10389548	Not Available	675	Open in IMG/M
3300030709\|Ga0307400_10419874	Not Available	848	Open in IMG/M
3300031522\|Ga0307388_10325216	Not Available	979	Open in IMG/M
3300031710\|Ga0307386_10239263	Not Available	892	Open in IMG/M
3300031710\|Ga0307386_10349936	Not Available	752	Open in IMG/M
3300031725\|Ga0307381_10081265	Not Available	1040	Open in IMG/M
3300031725\|Ga0307381_10336493	Not Available	548	Open in IMG/M
3300031729\|Ga0307391_10319662	Not Available	848	Open in IMG/M
3300031734\|Ga0307397_10167104	Not Available	958	Open in IMG/M
3300031743\|Ga0307382_10179738	Not Available	933	Open in IMG/M
3300031750\|Ga0307389_10406947	Not Available	860	Open in IMG/M
3300031784\|Ga0315899_10590429	Not Available	1049	Open in IMG/M
3300032360\|Ga0315334_10721439	Not Available	862	Open in IMG/M
3300032520\|Ga0314667_10337924	Not Available	829	Open in IMG/M
3300032521\|Ga0314680_10932710	Not Available	544	Open in IMG/M
3300034021\|Ga0335004_0729291	Not Available	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.54%
Host-Associated	Host-Associated	1.46%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.54%
Human	Host-Associated → Human	1.46%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	83.94%
Freshwater	Environmental → Aquatic → Freshwater	11.68%
Unclassified	Environmental → Aquatic → Unclassified	2.19%
Digestive System	Host-Associated → Human → Digestive System	1.46%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	24.09%
Oceanic	Environmental → Aquatic → Marine → Oceanic	22.63%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.79%
Coastal	Environmental → Aquatic → Marine → Coastal	16.06%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.57%
Lake	Environmental → Aquatic → Freshwater → Lake	4.38%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.92%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	2.19%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.73%
Strait	Environmental → Aquatic → Marine → Strait	0.73%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	24.09%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	21.90%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	16.06%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.03%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	5.84%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.84%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.38%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	2.19%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.46%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.73%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.73%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.73%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.73%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.73%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.73%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	20.44%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	16.06%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	10.22%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.03%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.84%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.84%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.65%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.65%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.19%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.19%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.46%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.46%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.46%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.46%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	1.46%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.46%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.73%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.73%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.73%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.73%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.73%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.73%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine	0.73%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	0.73%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.73%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.73%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.73%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	0.73%
Surface Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Surface Ocean Water	0.73%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000130	Marine microbial communities from chronically polluted sediments in Adventfjord, Norway - Svalbard Archipelago station 2 sample NOR 15_50m	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300005516	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF49B	Environmental	Open in IMG/M
3300005838	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_130m_DNA	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006394	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300007231	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA	Environmental	Open in IMG/M
3300007513	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007543	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3	Environmental	Open in IMG/M
3300007552	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571	Environmental	Open in IMG/M
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental	Open in IMG/M
3300007665	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-3	Environmental	Open in IMG/M
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300008832	Eukaryotic communities of water collected during the Tara Oceans expedition - TARA_A200000150	Environmental	Open in IMG/M
3300008952	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um	Environmental	Open in IMG/M
3300009003	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009263	Eukaryotic communities of water from the North Atlantic ocean - ACM27	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009466	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009538	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - H-2W	Environmental	Open in IMG/M
3300009599	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009608	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300012418	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012504	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012522	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300012968	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012970	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300016734	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041410CS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016740	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413YT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016882	Metatranscriptome of marine eukaryotic communities from Atlantic Ocean in f/2 medium with 33 psu seawater, 19 C, 33 psu salinity and 331 ?mol photons light - Strombidium rassoulzadegani ras09 (MMETSP0449_2)	Host-Associated	Open in IMG/M
3300017280	Metatranscriptome of coastal eukaryotic communities from Ligurian Sea in autoclaved artificial seawater, 19 C, 33 psu salinity and 638 ?mol photons light - Strombidium inclinatum S3 (MMETSP0208)	Host-Associated	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018599	Metatranscriptome of marine microbial communities from Baltic Sea - GS675_3p0_dT	Environmental	Open in IMG/M
3300018607	Metatranscriptome of freshwater lake microbial communities from Lake Tornetrask, Sweden - GS667_3p0_dT	Environmental	Open in IMG/M
3300018649	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_084 - TARA_N000001440 (ERX1782476-ERR1712161)	Environmental	Open in IMG/M
3300018692	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001382 (ERX1782155-ERR1712153)	Environmental	Open in IMG/M
3300018725	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_142 - TARA_N000003104 (ERX1782256-ERR1712230)	Environmental	Open in IMG/M
3300018765	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_152 - TARA_N000002803 (ERX1782330-ERR1712010)	Environmental	Open in IMG/M
3300018846	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_092 - TARA_N000001299 (ERX1789404-ERR1719503)	Environmental	Open in IMG/M
3300018928	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_093 - TARA_N000001111 (ERX1789573-ERR1719386)	Environmental	Open in IMG/M
3300018980	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_083 - TARA_N000001372 (ERX1782312-ERR1712127)	Environmental	Open in IMG/M
3300018989	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_152 - TARA_N000002803 (ERX1782326-ERR1711934)	Environmental	Open in IMG/M
3300019004	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_051 - TARA_N000000225 (ERX1782445-ERR1712173)	Environmental	Open in IMG/M
3300019031	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_142 - TARA_N000003104 (ERX1782386-ERR1711939)	Environmental	Open in IMG/M
3300019033	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_040 - TARA_N000000067 (ERX1782334-ERR1712080)	Environmental	Open in IMG/M
3300019036	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001382 (ERX1782404-ERR1712086)	Environmental	Open in IMG/M
3300019048	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_085 - TARA_N000001030 (ERX1782209-ERR1712166)	Environmental	Open in IMG/M
3300019085	Metatranscriptome of marine microbial communities from Baltic Sea - GS670_3p0_dT	Environmental	Open in IMG/M
3300019095	Metatranscriptome of marine microbial communities from Baltic Sea - GS694_3p0_dT	Environmental	Open in IMG/M
3300019123	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_085 - TARA_N000001030 (ERX1782390-ERR1712195)	Environmental	Open in IMG/M
3300019131	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001424 (ERX1809759-ERR1740116)	Environmental	Open in IMG/M
3300019149	Metatranscriptome of marine microbial communities from Baltic Sea - GS695_3p0_dT	Environmental	Open in IMG/M
3300019150	Eukaryotic communities of water from different depths collected during the Tara Oceans expedition - TARA_N000000616 (ERX1782105-ERR1711908)	Environmental	Open in IMG/M
3300019266	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101407AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300021169	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021336	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021872	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S5 C27 B21 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025508	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025879	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025887	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026182	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF49B (SPAdes)	Environmental	Open in IMG/M
3300027159	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573 (SPAdes)	Environmental	Open in IMG/M
3300027248	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028110	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 43R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028134	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028137	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028282	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_77 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028334	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 68R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028595	Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-MMB-Aug17	Environmental	Open in IMG/M
3300030699	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030702	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-14 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030709	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-17 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031522	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-3.R2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031710	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-2.R3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031725	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-1.R1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031729	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-4.R2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031734	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-7 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031743	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-1.R2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031750	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-3.R3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032520	Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Amb1_24May_surf (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300032521	Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Red3_22May_deep (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SA_S2_NOR15_50mDRAFT_100677366	3300000130	Marine	MAQKLGIPFTADLLALGSNSAISDALIEKAVAAGKSEAQINDAMASL*
Ga0031658_10465411	3300003860	Freshwater Lake Sediment	VKEMAHKLGIPFTPELLALGSNAAISDALIEKAVAAGKTEE*
Ga0066831_100089374	3300005516	Marine	MAQKLGIPFTNDLMQLGSNSLISDALIEKAVAAGKSEK*
Ga0008649_101473284	3300005838	Marine	MANKLGIPFTDDLSKLGSNSAISDALIEKAVALGKTEA*
Ga0070743_100993114	3300005941	Estuarine	MATKLGVPITQDLLALGSNEAISNALIDKAVASGKTEDEINKAMANL*
Ga0075466_10191963	3300006029	Aqueous	MKLGIPFTNDLLALGSNSAISDALIEKAVAAGKTEAQINAAMASLN
Ga0075492_14892253	3300006394	Aqueous	MKLGIPFTNDLLALGSNSAISDALIEKAVAAGKTEAQINAAMASL*
Ga0075471_101753303	3300006641	Aqueous	MANKLGIPFTNDLLALGSNAAISDALIEKAVAAGKSEAEINAAMATL*
Ga0075467_102666534	3300006803	Aqueous	MAKKLNVPMTPELLSLGSNEAISNALIDKAVASGASEAQINSAMASL*
Ga0075469_100956872	3300007231	Aqueous	MAMKLGIPFTNDLLALGSNSAISDALIEKAVAAGKTEAQINAAMASL*
Ga0105019_10752472	3300007513	Marine	MDKVQEMAVKLGVPFTADLMALGNNSAISDALIDKAVAAGKSE*
Ga0102853_10223972	3300007543	Estuarine	MAQKLGIPFTNDLVSLGSNSAISDALIERAVAAGKTETQINNAMATL*
Ga0102818_10432643	3300007552	Estuarine	MAQKLGISFTPDLIALGSNAAISDALIEKAVAAGKTEAQINSAMASL*
Ga0102820_10389951	3300007554	Estuarine	LGIPFTADLLALGSNSAISDALIEKAVAAGKTEAQINAAMASL*
Ga0102908_11206311	3300007665	Estuarine	MAQKLGIPFTADILALGSNSAISDALIEKAVAAGKSEAQINEAMALL*
Ga0102910_10107893	3300007667	Estuarine	MAQMLGIPFTADLIALGSNAAISDALIEKAVAAGKTEAQINAAMATL*
Ga0102823_10473491	3300007692	Estuarine	GIPFTADLLALGSNSAISDALIEKAVAAGKTEAQINAAMASL*
Ga0102951_11386404	3300007725	Water	VKEMASKLGIPVTPELLSLGSNEAISSALIDKAVAAGKTEEQINAAMSVL*
Ga0103951_104040072	3300008832	Marine	MANKLGIPFTDDLSKLGSNSAISDALIEKAVALGKTEAQINAAMAAL*
Ga0115651_13496953	3300008952	Marine	MAKKLNIPLTNELLNLGSNDAISSALIDKAVAAGKSEAQINKAMENM*
Ga0102813_10850053	3300009003	Estuarine	MASKLGIPFTDDLSKLGSNSAISDALIEKAVALGKTEAQINTAMAAL*
Ga0115566_104945531	3300009071	Pelagic Marine	MAAKLGVPMTKDLLGLGSNEAISSALIDKAVAAGKSEEQINAAMSVL*
Ga0115552_13658131	3300009077	Pelagic Marine	FTADLVALGTNAAISSALIEKAVAAGKTETEIDDAMSTL*
Ga0114963_104806401	3300009154	Freshwater Lake	MAHKLGIPFTPELLALGSNAAISDALIEKAVAAGNTEE*
Ga0114995_100446882	3300009172	Marine	VKEMAHKLGIPFTADLVALGTNAAISNALIEKAVSAGKTEA*
Ga0114959_102128663	3300009182	Freshwater Lake	MAHKLGVPFTSDLLALGSNAAISDALIEKAVAAGKTEAQINAAMASI*
Ga0103872_10292501	3300009263	Surface Ocean Water	MAQKLGIPFTADLLALGSNSAISDALIEKAVAAGKTEAQINDAMASL*
Ga0115008_101149902	3300009436	Marine	MAQKLGIPFTDDLMKLGSNSDISDSLIEKAVAAGKSEVEINKAMASL*
Ga0126448_10263193	3300009466	Meromictic Pond	MAAKLGVPFTDDLLKLGSNSAISDALIEKAVAAGKSEEQINAAMASL*
Ga0126448_10419763	3300009466	Meromictic Pond	MAAKLGVPVTPELLSLGSNEAISSALIDKAVAAGKTEE*
Ga0115569_104100551	3300009497	Pelagic Marine	VKELAQKLEVPFTQDLLSLGSNSAISDALIEKAVAAGKTVAQINAAMSTL*
Ga0115003_108422201	3300009512	Marine	LGIPFTADLVALGTNAAISNALIEKAVSAGKTEA*
Ga0115004_100455911	3300009526	Marine	MAHKLGIPFTADLVALGTNAAISNALIEKAVSAGKTEA*
Ga0129287_102283182	3300009538	Beach Aquifer Porewater	LGIPVTPDLLALKSNSAISDALIEKAVAAGKSEAEINAAMATL*
Ga0115103_11308341	3300009599	Marine	MAQKLGVPFTADLLKLGSNSAISDALIEKAVAAGKSEDQINAAMASL*
Ga0115103_16916254	3300009599	Marine	MAQKLGIPFTTDLIALGSNSAISDALIEKAVAAGKTEQQINAAMASL*
Ga0115100_109221921	3300009608	Marine	MAHKLGIPFTADLVALGTNAAISSALIEKAVAAGKTESEIDAAMSTL*
Ga0115104_101100681	3300009677	Marine	MAQKLGIPFTDDLMNLGSNSAISDALIEKAVAAGKSEGEINKAMASL*
Ga0115105_107111452	3300009679	Marine	VKEMAAKLGVPFTADLMALPGGNSAISDALIEKAVAAGKSE*
Ga0115001_101385573	3300009785	Marine	MAHKLGIPFTADLVALGTNAAISNALIEKAVSAGKTEAQIDAAMSTL*
Ga0129333_112650301	3300010354	Freshwater To Marine Saline Gradient	VKEMASKLGVPFTNDLLALGSNAAISDALIEKAIAAGKTEAEINAAMASI*
Ga0138261_15497191	3300012418	Polar Marine	MASKLGVPFTNDLAALGSNSAISDALIEKAVAAGKSEAQINAAMSSL*
Ga0129347_12950521	3300012504	Aqueous	VKEMAQKLGVPFTSDLMALGSNSAISDALIEKAVAAGKTEAQINAAMSSL*
Ga0129347_13177292	3300012504	Aqueous	LASKLGVPFTNDLLALGSNSAISDALIEKAVAAGKTVAQINSAMSTL*
Ga0129326_13792741	3300012522	Aqueous	MLGIAFTPDLIALGSNSAISDALIEKAVAAGKTEAQINAAMA*
Ga0129331_14325153	3300012524	Aqueous	MANKLGIPFTDDISKLGSNSAISDALIEKAVALGKTEA*
Ga0163180_111841931	3300012952	Seawater	QKLGIPFTDDLMKLGSNSDISDSLIEKAVAAGKSEAEINKAMQSL*
Ga0163180_115446991	3300012952	Seawater	MASKLGIPFTDDLMNLGSNSAISDALIEKAVAAGKSEAEINKAMASL*
Ga0163179_113240511	3300012953	Seawater	MASKLGIPFTDDLMNLGTNSAISDALIEKAVAAGKSEAEINKAMASL*
Ga0163179_113303042	3300012953	Seawater	MAQKLGIPFTDDLMALGSNSAISDSLIEKAVAAGKSEAEINKAMASL*
Ga0163111_111878743	3300012954	Surface Seawater	LASKLGVPFTNDLLSLGSNSAISDALIEKAVAAGKTVAQINSAMSTL*
Ga0129337_10314222	3300012968	Aqueous	VKEMATKLGVPITQDLLALGSNEAISNALIDKAVASGKTEDEI
Ga0129338_12541563	3300012970	Aqueous	VLASQDKIKEMAAKLRIPFTNDLLALGSNSAISDALIEKAVALGRSEAEINAAMSTL*
Ga0164294_103561871	3300013006	Freshwater	VKEMAHKLGIPFTPELLALGSNAAISDALIEKAVAAGKTEEQINAAMASI*
Ga0182092_11408881	3300016734	Salt Marsh	MANKLGIPFTDDLSKLGSNSAISDALIEKAVALGKTEAQINSAMAAL
Ga0182096_13812573	3300016740	Salt Marsh	MASKLGIPVTPELMQLGSNEAISSALIDKAVAAGKTEE
Ga0182053_10626191	3300016749	Salt Marsh	MAAKLGVPMTKDLLGLGSNEAISSALIDKAVAAGKSEEQINAAMS
Ga0186577_1049221	3300016882	Host-Associated	MDKVREMAQKLGVPFTNDLMALGSNSAISDALIEKAVAAGKTEAQINAAMATL
Ga0186684_1132401	3300017280	Host-Associated	MAQKLGVPFTADLMALGSNSAISDALIEKAVAAGKSEEQINAAMASL
Ga0181431_10994972	3300017735	Seawater	MAVKLGIPFTDDLMGLGSNSAISDALIEKAVAAGKSEAEINKAMASL
Ga0181561_100953323	3300018410	Salt Marsh	MAAKLGVPFTDDLLKLGSNSAISDALIEKAVAAGKTEEQINSAMASL
Ga0181563_104071261	3300018420	Salt Marsh	GIPFTNDLLALGSNSAISDALIEKAVAAGKTEAQINAAMASLXNLTLTI
Ga0181563_107349242	3300018420	Salt Marsh	MAQMLGIPFTADLIALGSNSAISDALIEKAVAAGKTEAQINAAMATL
Ga0181592_102720582	3300018421	Salt Marsh	VLASQDKIKEMASKLRIPFTNDLLALGSNSAISDALIEKAVALGRSEAEINAAMSTL
Ga0188834_10169951	3300018599	Freshwater Lake	MLGIPFTADLIALGSNSAISDALIEKAVAAGKTEAQINAA
Ga0188821_10205251	3300018607	Freshwater Lake	VKEMAHKLGIPFTPELLALGSNAAISDALIEKAVAAGKTEE
Ga0192969_10193941	3300018649	Marine	MAHKLGIPFTADLVALGTNAAISNALIEKAVAAGKTEAEIDAAMSTL
Ga0192944_10374202	3300018692	Marine	MAHKLGIPFTADLVALGTNAAISNALIEKAVSAGKTEAQIDAAMSTL
Ga0193517_10333162	3300018725	Marine	VKEMAAKLGVPFTADLMALPGGNSAISDALIEKAVAAGKSE
Ga0193031_10153841	3300018765	Marine	MAAKLGVPFTADLMALPGGNSAISDALIEKAVAAGKSE
Ga0193253_10552582	3300018846	Marine	MAHKLSIPFTADLVALGTNAAISNALIEKAVAAGKTEAEIDAAMSAL
Ga0193260_100408622	3300018928	Marine	MAQKLGIPFTEDLMKLGSNSDISDALIEKAVAAGKSETEINKAMQSL
Ga0192961_101687981	3300018980	Marine	MASKLGIPFTDDISKLGSNSAISDALIEKAVALGKTES
Ga0193030_100521381	3300018989	Marine	VKEMAHKLGIPFTADLVALGTNAAISNALIEKAVAAGKTEAEIDAAMSTL
Ga0193030_100562802	3300018989	Marine	VTPPTDISKEKVKLVAKKLDIPFTKDLLALGSNEAISDALIEQAMANGKTDAEINEAMAA
Ga0193030_101945481	3300018989	Marine	MAGKLGVPFTADLMALGSNSAISDALIEKAVAAGKSEA
Ga0193030_102762032	3300018989	Marine	LGIPFTKDLMQLGSNSDISDALIEKAVAAGKSEAQINSAMASL
Ga0193078_102006921	3300019004	Marine	MAQKLGIPFTDDLMKLGSNSDISDALIEKAVAAGKTEAEINKAMQSLXGMRVKILE
Ga0193516_100961724	3300019031	Marine	MAQKLGVPFTNDLMALGSNSSISDALIEKAIAAGKSE
Ga0193516_103147552	3300019031	Marine	MAQKLGVPFTNDLMVLGSNSSISDALIEKAIAAGKSE
Ga0193037_102098882	3300019033	Marine	MAQKLGIPFTQDLINLGSNAAISDALIEKAVAAGKTEAQINAAMAAI
Ga0193037_102987351	3300019033	Marine	MASKLGVPFTADLMALGSNSAISDALIEKAVAAGKTEQQINNAMAAL
Ga0192945_100913271	3300019036	Marine	MAQKLGIPFTQDLINLGTNAAISDALIEKAVAAGKSESQINEAMAAL
Ga0192945_100934041	3300019036	Marine	MAHKLGIPFTADLVALGTNAAISNALIEKAVAAGKSEAEIDAAMSTL
Ga0192981_101263212	3300019048	Marine	MAQKLGVPFTNDLLGLGSNSAISDALIEKAVAAGKSEAQINAAMASL
Ga0188830_10053681	3300019085	Freshwater Lake	MATKLGVPITQDLLALGSNEAISNALIDKAVASGKTEDEINKAMANL
Ga0188866_10084233	3300019095	Freshwater Lake	MAQKLGVPFTNDLLSLGSNSAISDALIEKAVAAGKSEAQINAAMASL
Ga0188866_10094701	3300019095	Freshwater Lake	MAQKLGVPFTADLMALGSNSAISDALIEKAVAAGKTEDQINAAMAQL
Ga0192980_10478291	3300019123	Marine	MAQKLGIPFTADLISLGSNSAISDALIEKAVAAGKS
Ga0193249_10767192	3300019131	Marine	MEKVKEMAQKLGIPFTNDLMSLGSNSAISDALIEKAVSAGKTEE
Ga0188870_100465381	3300019149	Freshwater Lake	MDKVKEMAGKLGVPFTADLMALGSNSAISDSLIEKAVAAGKTES
Ga0188870_100501411	3300019149	Freshwater Lake	MAHKLGIPFTADLVALGTNAAISNALIEKAVAAGKTESEIDAAMSTL
Ga0188870_100698502	3300019149	Freshwater Lake	MAAKLGIPFTDDISKLGSNSAISDALIEKAVALGKTEAQINAAMAAL
Ga0194244_100415332	3300019150	Marine	MEKVKEMAQKLGIPFTNDLMSLGSNSAISDALIEKAVSAGKSEEQIQAAMATL
Ga0182061_13575081	3300019266	Salt Marsh	MAAKLGVPFTDDLLKLGSNSAISDALIEKAVAAGKTE
Ga0194115_103934121	3300020183	Freshwater Lake	MAHKLGIPFTPELLALGSNAAISDALIEKAVAAGKT
Ga0206687_17815012	3300021169	Seawater	MASKLGIPFTDDLSKLGSNSAISDALIEKAVALGKTEAQINTAMAALXFLFRYSKII
Ga0210307_10799622	3300021336	Estuarine	MAQMLGIPFTADLIALGSNAAISDALIEKAVAAGKTEAQINAAMATL
Ga0210307_13443002	3300021336	Estuarine	MAQKLGIPFTADILALGSNSAISDALIEKAVAAGKSEAQINEAMALL
Ga0063132_1176051	3300021872	Marine	MAQKLGIPFTDDLMKLGSNSDISDALIEKAVAAGKSENEINKAM
Ga0222717_106926651	3300021957	Estuarine Water	FTDDLMNLGSNSAISDSLIEKAVAAGKSEAEINKAMAALXSLGXEIKKIXF
Ga0222716_103867211	3300021959	Estuarine Water	KASQDKVKEMAQKLGIPFTADLIALGTNAAISDALIEKAVAAGKSEAQINDAMSAL
Ga0222713_101492923	3300021962	Estuarine Water	VLASQDKIKEMAAKLRIPFTNDLLALGSNSAISDALIEKAVALGRSEAEINAAMSTL
Ga0209634_13035821	3300025138	Marine	ETKASQDKVKEMAHKLGIPFTADLVALGTNAAISNALIEKAVAAGKTESEIDAAMSTL
Ga0208148_10153703	3300025508	Aqueous	MKLGIPFTNDLLALGSNSAISDALIEKAVAAGKTEAQINAAMASLXN
Ga0209308_102832381	3300025869	Pelagic Marine	MAAKLGVPMTKDLLGLGSNEAISSALIDKAVAAGKSEEQINAAMSVL
Ga0209555_100844131	3300025879	Marine	QKLGIPFTADILALGSNSAISDALIEKAVAAGKSEAQINEAMALL
Ga0208544_101130581	3300025887	Aqueous	MAMKLGIPFTNDLLALGSNSAISDALIEKAVAAGKTEAQINAAMASL
Ga0208544_101657323	3300025887	Aqueous	MAKKLNVPMTPELLSLGSNEAISNALIDKAVASGASEAQINSAMASL
Ga0208275_10081451	3300026182	Marine	MAQKLGIPFTNDLMQLGSNSLISDALIEKAVAAGKSEK
Ga0208020_10213463	3300027159	Estuarine	MAQKLGISFTPDLIALGSNAAISDALIEKAVAAGKTEAQINSAMASL
Ga0208176_10149321	3300027248	Estuarine	MLGIPFTADLIALGSNAAISDALIEKAVAAGKTEAQINAAMATL
Ga0209710_10957951	3300027687	Marine	MAHKLGIPFTADLVALGTNAAISNALIEKAVSAGKTEA
Ga0209188_13093872	3300027708	Freshwater Lake	MAHKLGVPFTSDLLALGSNAAISDALIEKAVAAGKTEAQINAAMASI
Ga0247584_10828314	3300028110	Seawater	MASKLGIPFTDDLSKLGSNSAISDALIEKAVALGKTEAQINT
Ga0256411_10939754	3300028134	Seawater	MAHKLGIPFTADIVALGTNAAISNALIEKAVAAGKTEQEIDAAMSTL
Ga0256412_12875182	3300028137	Seawater	MAHKLGIPFTADLVALGTNAAISNALIEKAVAAGKTEAQID
Ga0256413_12912822	3300028282	Seawater	MAQKLGIPFTEDLMKLGSNSDISDALIEKAVAAGKSEAEINKAMASL
Ga0247597_10532201	3300028334	Seawater	MAHKLSIPFTADLVALGTNAAISNALIEKAVAAGKTEAEIDA
Ga0272440_11183271	3300028595	Marine Sediment	MAQKLGIPFTNDLLALGSNSAISDALIEKAVAAGKTEEQINAAMA
Ga0307398_102095351	3300030699	Marine	MEKVREMAGKLGIPFTGDLMALGSNSAISDALIEKAIAAGKSESQITNAMNSL
Ga0307399_103895481	3300030702	Marine	MASKLGVPFTADLMALSGGNSAISDALIEKAVAAGKSE
Ga0307400_104198742	3300030709	Marine	VKEMAHKLGIPFTADLVALGTNAAISNALIEKAVSAGKTEAQID
Ga0307388_103252162	3300031522	Marine	VKEMAHKLGIPFTADLVALGTNAAISNALIEKAVSAGKTEAQIDAAMSTL
Ga0307386_102392632	3300031710	Marine	MASKLGVPFTNDLLALGSNSAISDALIEKAVAAGKTEAQINAAMASL
Ga0307386_103499363	3300031710	Marine	MAQKLGVPFTSDLMALGSNSAISDTLIEKAVAAGKSE
Ga0307381_100812651	3300031725	Marine	MAGKLGIPFTGDLMALGSNSAISDALIEKAIAAGKSESQITSAMNSL
Ga0307381_103364931	3300031725	Marine	MAAKLGVPFTADLMALGGNSAISDALIEKAVAAGKSD
Ga0307391_103196623	3300031729	Marine	MAQKLGIPFTQDLVNLGTNAAISDALIEKAVAAGKSETQINEAMAAL
Ga0307397_101671041	3300031734	Marine	MEKVQEMASKLGVPFSVDLMKLGSNTDISDALIEKAVAAGKSEAQINAAMQSL
Ga0307382_101797381	3300031743	Marine	MAQKLGIPFTDDLMNLGSNSSISDALIEKAVAAGKTEAEINKAMASL
Ga0307389_104069471	3300031750	Marine	MAHKLGIPFTADLVALGTNAAISNALIEKAVSAGKT
Ga0315899_105904291	3300031784	Freshwater	MAHKLGIPFTPELLALGSNAAISDALIEKAVAAGKTEE
Ga0315334_107214391	3300032360	Seawater	MAQKLGVPFTSDLMALGSNSSISDALIEKAVAAGKSET
Ga0314667_103379241	3300032520	Seawater	MAQKLGVPFTNDLLSLGSNSAISDALIEKAVAAGKSEAQINAAMAS
Ga0314680_109327102	3300032521	Seawater	MAHKLGIPFTADLVALGTNAAISSALIEKAVAAGKTETEIDDAMSTL
Ga0335004_0729291_269_421	3300034021	Freshwater	VKEMAHKLGIPFTPELLALGSNAAISDALIEKAVAAGKTEEQINAAMASI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056633

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign