NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F056560

Metagenome / Metatranscriptome Family F056560

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F056560
Family Type Metagenome / Metatranscriptome
Number of Sequences 137
Average Sequence Length 54 residues
Representative Sequence MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARSQAAQPQP
Number of Associated Samples 119
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 18.98 %
% of genes near scaffold ends (potentially truncated) 23.36 %
% of genes from short scaffolds (< 2000 bps) 73.72 %
Associated GOLD sequencing projects 100
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (83.942 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(16.058 % of family members)
Environment Ontology (ENVO) Unclassified
(29.197 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.146 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82
1SwRhRL3b_0834.00001810
2JGI10216J12902_1057664052
3JGI12630J15595_100845262
4JGI25382J43887_104804052
5soilH1_100869171
6rootH1_102487462
7Ga0062384_1012161252
8Ga0062388_1011146472
9Ga0066685_107276551
10Ga0065704_100932871
11Ga0070683_1004145374
12Ga0070683_1015650191
13Ga0070680_1000491622
14Ga0070668_1007135032
15Ga0070709_104059931
16Ga0070713_1003950473
17Ga0070735_101807353
18Ga0070684_1009372212
19Ga0066704_106107052
20Ga0070664_1005562543
21Ga0066693_100004549
22Ga0070761_1000005929
23Ga0068861_1000154854
24Ga0081540_10232376
25Ga0075522_101756531
26Ga0066658_108173451
27Ga0079224_1015289141
28Ga0105247_113301342
29Ga0099792_109278571
30Ga0116229_1000062529
31Ga0116229_100833634
32Ga0116230_100920424
33Ga0116230_110432541
34Ga0116220_100163664
35Ga0105238_115706072
36Ga0116231_101615202
37Ga0116228_102905301
38Ga0116226_103125802
39Ga0116226_117448642
40Ga0123356_100386887
41Ga0134063_101891943
42Ga0134125_117598322
43Ga0137389_112649481
44Ga0137364_100095683
45Ga0137399_100987293
46Ga0137399_109227412
47Ga0137399_109866042
48Ga0137362_101848364
49Ga0137358_100008749
50Ga0137398_108950711
51Ga0137397_100467423
52Ga0137413_101089282
53Ga0137413_104607531
54Ga0137416_106719592
55Ga0137416_119859552
56Ga0137407_101556493
57Ga0153915_115697732
58Ga0153916_104506433
59Ga0157372_124065141
60Ga0157372_133599571
61Ga0181531_105740472
62Ga0182013_1000439212
63Ga0181519_101643252
64Ga0182030_109442501
65Ga0120098_10068952
66Ga0120098_10148662
67Ga0167668_10076055
68Ga0137412_100620964
69Ga0137412_102095072
70Ga0187778_1000101922
71Ga0187783_100018828
72Ga0190265_102482503
73Ga0066655_106083311
74Ga0187892_1000002687
75Ga0193751_11918642
76Ga0179592_100076583
77Ga0210407_108394522
78Ga0210401_102271692
79Ga0210406_103596193
80Ga0210406_109622701
81Ga0210400_108240871
82Ga0247764_11681302
83Ga0247777_10527682
84Ga0224557_11991282
85Ga0247780_10736432
86Ga0247676_10353782
87Ga0209520_107161972
88Ga0207671_103980882
89Ga0207660_100262624
90Ga0207700_109958012
91Ga0207661_116890121
92Ga0207679_107174881
93Ga0207668_106939932
94Ga0207675_1000269694
95Ga0209688_10456922
96Ga0209154_10180695
97Ga0209471_11222963
98Ga0209152_104398071
99Ga0209378_11957041
100Ga0179587_100063603
101Ga0179587_105417641
102Ga0208042_11178662
103Ga0209217_11048142
104Ga0209772_102899381
105Ga0209208_101235301
106Ga0209274_1000002361
107Ga0209611_100332862
108Ga0209167_102534042
109Ga0209275_108019602
110Ga0209488_108673663
111Ga0209006_111787582
112Ga0209168_101385071
113Ga0137415_102924073
114Ga0302234_104282192
115Ga0302183_104178612
116Ga0311372_105428441
117Ga0299915_106395942
118Ga0073996_101295322
119Ga0073995_101124192
120Ga0170824_1073672152
121Ga0170824_1150052104
122Ga0170824_1235396172
123Ga0302324_1036048311
124Ga0307513_102058202
125Ga0170819_168754532
126Ga0310686_1066974208
127Ga0310686_1132990671
128Ga0310686_1187283542
129Ga0307476_102898092
130Ga0307478_102709384
131Ga0307478_105072122
132Ga0306921_103340113
133Ga0335085_111279401
134Ga0335075_101777752
135Ga0299912_101125612
136Ga0371487_0011135_1891_2058
137Ga0372943_0773237_293_460
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.22%    β-sheet: 0.00%    Coil/Unstructured: 45.78%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARSQAAQPQPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
83.9%16.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Bog Forest Soil
Bog
Freshwater Wetlands
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Glacier Forefield Soil
Agricultural Soil
Grasslands Soil
Surface Soil
Peatlands Soil
Switchgrass Rhizosphere
Sugarcane Root And Bulk Soil
Arctic Peat Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Peatland
Bog
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Fossill
Soil
Palsa
Peat Soil
Plant Litter
Bio-Ooze
Termite Gut
Switchgrass Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Ectomycorrhiza
Sugarcane Root And Bulk Soil
Switchgrass Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Host-Associated
4.4%16.1%7.3%6.6%2.9%4.4%2.9%7.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwRhRL3b_0834.000018102162886006Switchgrass RhizosphereMESKLANDAERALIEATQKLSPEERLNAFLTHCRLVMELHEASQKPVTSPSPQPS
JGI10216J12902_10576640523300000956SoilMESKVAKEAERALVEATQRLSPEERLNAFLAHSRLVMELYEAGRKMRGTEQQASS*
JGI12630J15595_1008452623300001545Forest SoilMESKVAKEAERALIEATQRLSPEERLNAFLEHCRLVTQLYEAGEKLRSHPLLQKP*
JGI25382J43887_1048040523300002908Grasslands SoilMESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP*
soilH1_1008691713300003321Sugarcane Root And Bulk SoilMESKVAKEAEWALMESTQRLGFEERLNAFLAHCRLVMELYEAGQRARTAQPQS*
rootH1_1024874623300003323Sugarcane Root And Bulk SoilMESKVAKEAERALIEATQRLSPEERLNAFLAHCRLIMELYEAGQEARSQPARPQI*
Ga0062384_10121612523300004082Bog Forest SoilMESKVAKEAERALIDATQRLSPEERLNAFLEHCRLVTQLYQAGEQVRARTPLRKP*
Ga0062388_10111464723300004635Bog Forest SoilRLPGMKSKLAEAAERALVDATQRLSPEQRVNAFLAHCRLVTQLYEAGRKLRSQVAHSQS*
Ga0066685_1072765513300005180SoilMESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGRKVQIRQTQRQP*
Ga0065704_1009328713300005289Switchgrass RhizosphereMESKLANDAERALIEATQKLSPEERLNAFLTHCRLVMELHEASQKPVTSPSPQPS*
Ga0070683_10041453743300005329Corn RhizosphereMESKVAKEAEWALMESTQRLGFEERLNAFLAHCRLVMAPYEPGQAQIHSARLPQ*
Ga0070683_10156501913300005329Corn RhizosphereMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQRARTAQPQP*
Ga0070680_10004916223300005336Corn RhizosphereMESKVAKEAEWALMESTERLGFEERLNAFLAHCRLVMALYEPGQAQIHSARLPQ*
Ga0070668_10071350323300005347Switchgrass RhizosphereMDSKVANEAEHALVEATQRLSPEEGLNAFLAHCRLVMDLFDAGQKIRASEQRTSSP*
Ga0070709_1040599313300005434Corn, Switchgrass And Miscanthus RhizosphereMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARSQAAQPQP*
Ga0070713_10039504733300005436Corn, Switchgrass And Miscanthus RhizosphereMESKVAKEAERALVEATQRLGPEERLNAFLTHCRLVMELYETGQKVRSQSAQPQS*
Ga0070735_1018073533300005534Surface SoilMESKVAKQAERALVEATQRLSPEERLNAFLAHCRLVIELHEAGQKVQRRSTQRQT*
Ga0070684_10093722123300005535Corn RhizosphereMESKVAKEAEWALMESTQRLGFEERLNAFLAHCRLVMAPYEPGQAQIHSARSPQ*
Ga0066704_1061070523300005557SoilVESKIAKEAERALIEATQRLSPEERVNACLAHCRLVMELFEAGQKVQIRQTQRQP*
Ga0070664_10055625433300005564Corn RhizosphereMESKVAKEAEWALMESTQRLGFEERLDAFLAHCRLVMALYEPGQAQIHSARLPQ*
Ga0066693_1000045493300005566SoilRVMESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP*
Ga0070761_10000059293300005591SoilMKSKLAEAAEKALVEATQRLSPEQRVNAFLAHCRLIMQLYEAGQKLRSHAAHSQS*
Ga0068861_10001548543300005719Switchgrass RhizosphereMESKLAKEAERALVEATQRMSPEERLNSFLEHCRLVTELYEAGLKLQPPPQAQS*
Ga0081540_102323763300005983Tabebuia Heterophylla RhizosphereMDSKLAEAAERALVEATQKLRPEERLNAFLEHCRLVTQLFETGQKMRDAGTSQLKP*
Ga0075522_1017565313300006638Arctic Peat SoilVESQLAKDGARALVQATQKLSPEERLNACLAHCQLVTQLYEAGQRIRSPDTQPRKPWELA
Ga0066658_1081734513300006794SoilIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP*
Ga0079224_10152891413300009095Agricultural SoilMESRLASEARRALVAATQKLTPEQRVEAFLVHCRLLAELRGAGRNVPPQTPAS*
Ga0105247_1133013423300009101Switchgrass RhizosphereMESKVAKEAERALVEATQRLSLEERLNAFLAHCRLVMELYEAGQRARTAQPQP*
Ga0099792_1092785713300009143Vadose Zone SoilMESKIAKAAERGLVEATQRLSPEERLNAFLEHCRLVMELYEAGAKIRVRVLRSQ*
Ga0116229_10000625293300009500Host-AssociatedMESKLAKQAERALVDATQTLKPEQRVNAYLAHCRLVMQLHEAGRKLRADAAPPPP*
Ga0116229_1008336343300009500Host-AssociatedMESTLAKDAELALVEATQRLSPEQRVEAFLAHSRLMVELYGAGRELRAAEPKLHP*
Ga0116230_1009204243300009510Host-AssociatedMESTLAKDAELALVEATQRLSPEQRVEAFLAHSRLMVELYAAGRELRAAEPKLRP*
Ga0116230_1104325413300009510Host-AssociatedESTLAKDAELALVEATQRLSPEQRVEAFLAHSRLVMELYGAGRQQRAAEPNLRP*
Ga0116220_1001636643300009525Peatlands SoilMESKLAKEAERALVEATQQLSPEERLNAFLAHCRLVMELYEAGQKMRARTPQPRS*
Ga0105238_1157060723300009551Corn RhizosphereMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELCEAGQRARTAQPQS*
Ga0116231_1016152023300009697Host-AssociatedMESTLAKDAELALVEATQRLSPEQRVEAFLAHSRLMVELYGAGRELRAAEPKLRP*
Ga0116228_1029053013300009701Host-AssociatedTVESTLAKVAELALVEATQRLSPGERVEAFLAHSRLVTELYRAGTKLRASEPQPQPQP*
Ga0116226_1031258023300009787Host-AssociatedMESKLAKEAELALVDATQRLCPEERVIAYLAHCRLVMQLYEAGQQLRANTSDRPK*
Ga0116226_1174486423300009787Host-AssociatedVESTLAKVAELALVEATQRLSPGERVEAFLAHSRLVTELYRAGTKLRASEPQPQPQP*
Ga0123356_1003868873300010049Termite GutMQSKLAREAERSLIEATQRLPSEQRLNAFLEHCRLVTELYEAGQKIRSPKPRQKS*
Ga0134063_1018919433300010335Grasslands SoilMESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQ
Ga0134125_1175983223300010371Terrestrial SoilMESKLAKQAEQALIEATQRLTPEERLNAFLAHCRLVAELYEAGQKMRAASPPQS*
Ga0137389_1126494813300012096Vadose Zone SoilKALVEATQKLCPEERLNAFLEHCRLVTQLYEAGQKIRSAGTSPLQP*
Ga0137364_1000956833300012198Vadose Zone SoilMESKIVKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP*
Ga0137399_1009872933300012203Vadose Zone SoilMKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPQPRP*
Ga0137399_1092274123300012203Vadose Zone SoilMKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPRP*
Ga0137399_1098660423300012203Vadose Zone SoilMESKVAKEAERALIEATQRLSPEERLNAFLEHCRLVTQLYEAGQEIRSRAPQRKP*
Ga0137362_1018483643300012205Vadose Zone SoilMESKIAKAAERGLVEATQRLSPEERLNAFLEHCRLVMELYEAGGKIRARVLRSQ*
Ga0137358_1000087493300012582Vadose Zone SoilMESKIAKAAERGLVEATQRLSPEERLNAFLEHCRLVIELYEAGGKIRARVLRSQ*
Ga0137398_1089507113300012683Vadose Zone SoilMKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKL
Ga0137397_1004674233300012685Vadose Zone SoilMKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPQP*
Ga0137413_1010892823300012924Vadose Zone SoilMESKLAKAAERALVEATQRLNPEERLNAFLVHCRLVTELYEAGRKMRAGFPQP*
Ga0137413_1046075313300012924Vadose Zone SoilAAERALVEATQRLGPEERLNAFLVHCRLVTELYEAGQKLRASFPQP*
Ga0137416_1067195923300012927Vadose Zone SoilMESKLAKEAEKSLVEATQKLCPEERLNAFLEHCRLVTQLYEAGQKLRSPGTSQLKP*
Ga0137416_1198595523300012927Vadose Zone SoilSRTGGVTSSGWLRYTRQMESKVAKEAERALIEATQRLSPEERLNAFLEHCRLVTQLYEAGQEIRSRAPQRKP*
Ga0137407_1015564933300012930Vadose Zone SoilMESKIAKAAERGLVEATQRLRPEERLNAFLEHCRLVMELYEAGAKIRARVLRSQ*
Ga0153915_1156977323300012931Freshwater WetlandsMESKLANEAERALIEATQRLSPEERLNSFLARCRLIMELHEAGQKLQASQPRPAS*
Ga0153916_1045064333300012964Freshwater WetlandsMESKVAKQAERALVEATQRLSPEERLNAFLTHCRLVVELYEAGRKIRTRELPRN*
Ga0157372_1240651413300013307Corn RhizosphereTWDMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARSQAAQPQP*
Ga0157372_1335995713300013307Corn RhizosphereMESKVAKEAEWALMESTQRLGFEERLNAFLAHCRLVMALYEPGQAQIHSARLPQ*
Ga0181531_1057404723300014169BogMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQRTRTAQPQP*
Ga0182013_10004392123300014492BogMESKLATEAERALVQATQRLSPEERVNAFLVHCRLITELYEAGEKIRADALKQQP*
Ga0181519_1016432523300014658BogMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVTELHEAGQRTRTAHPQP*
Ga0182030_1094425013300014838BogMQSKLANEAERALVEATQHLSPEERLNAYLAHCRLVMELYEAGEKIRSQALQRQS*
Ga0120098_100689523300015170FossillMESKIAKEAERSLIEATQRLSPEERLNAYLEHCRLVMELYEAGQRMRSQSSPPPESHENH
Ga0120098_101486623300015170FossillMESKLAKEAHQALVEAMQRLTPEERLNAFLVHCRLMMDLHRAGEQMRTRKSPRSV*
Ga0167668_100760553300015193Glacier Forefield SoilMESKLAKAAERALVEATQRLSPEERLNAFLAHCRLVIELYEAGQKMRACIPQPQ*
Ga0137412_1006209643300015242Vadose Zone SoilMESKLAKAAERALVEATQRLNPEERLNAFLVHCRLVTELYEAGRKMRAGSPQP*
Ga0137412_1020950723300015242Vadose Zone SoilMESKIAKSAERGLVEATQRLSPEERLNAFLEHCRLVMELYEAGAKIRVRVLRSQ*
Ga0187778_10001019223300017961Tropical PeatlandMRSQLARKAKRALLEATQRLTPEERLNAFLAHSRLVMQLYRAGQKLRHPFARQSPR
Ga0187783_1000188283300017970Tropical PeatlandVESKLAQETDRSLVEATQRLSPEERLNAFLTHCRLVMELYEAGRELEARSGRRQS
Ga0190265_1024825033300018422SoilMESRIAAEAERALIEATQRLSPEERVNAFLTHCRLVAELRAAGEALRASEAKLT
Ga0066655_1060833113300018431Grasslands SoilMESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP
Ga0187892_10000026873300019458Bio-OozeMESKVAVSSDRSLVEGTQSLSPEQRVEAFLEHCRLVMELYEAGQRLSEGQPPRQQ
Ga0193751_119186423300019888SoilMESKIATAAERGLVEATQRLSPEERLNAFLEHCRLVMELYEAGQKMRAG
Ga0179592_1000765833300020199Vadose Zone SoilMKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPQP
Ga0210407_1083945223300020579SoilMESKLAKAAESALVEATQRLSPEERLNAFLAHCRLVIELYEAGQKMRACIPQPQ
Ga0210401_1022716923300020583SoilMKSKLAEAAEKALVEATQRLSPEQRVNAFLAHCRLVMQLYEAGQKLRSNAAAHSQS
Ga0210406_1035961933300021168SoilMESKLAKDAERALIDATQKLRPEERLNAFLEHCQLMTQLYEAGQRIRAPDTRQRKP
Ga0210406_1096227013300021168SoilMESKVAKEAERALIEASQKLSPEERLNAFLEHCRLVTQLYEAGEKMRSRLPLQKP
Ga0210400_1082408713300021170SoilMESKVAKEAERALIEATQRLSPEERLNAFLAHCRLVMELHEAGQKMVGPADHQQP
Ga0247764_116813023300022897Plant LitterAGGRLSSMESKVAKEAERALIEATQRLSPEDRVRAFLSHSRLVLKLHRAGQRLHSKEQKQ
Ga0247777_105276823300022917Plant LitterMESKVAKEAERALIEATQRLSPEDRVRAFLSHSRLVLKLHRAGQRLHSKEQKQP
Ga0224557_119912823300023101SoilMESKLATEAERALVQATQRLSPEERVNAFLVHCRLITELYEAGEKIRADALKQQP
Ga0247780_107364323300023265Plant LitterMESRIAKEAEIALVEATQRLSPEERLNAFLVHCRLMMELHEAGRKLSGTPRSTT
Ga0247676_103537823300024249SoilMESKIAKGAERALVEATQRLSPEERLNAFLMHCRLVTELYEAGQKMRVNVPQP
Ga0209520_1071619723300025319SoilMESKLARQSERELIAATQRLSAEERLNAFLRHCQLVMELYRAGRKSSSPP
Ga0207671_1039808823300025914Corn RhizosphereMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQRARTAQPQP
Ga0207660_1002626243300025917Corn RhizosphereMESKVAKEAEWALMESTERLGFEERLNAFLAHCRLVMALYEPGQAQIHSARLPQ
Ga0207700_1099580123300025928Corn, Switchgrass And Miscanthus RhizosphereMESKVAKEAERALVEATQRLSPEERLNAFLTHCRLVMELYETGQKVRSQSAQPQS
Ga0207661_1168901213300025944Corn RhizosphereMESKVAKEAEWALMESTQRLGFEERLNAFLAHCRLVMAPYEPGQAQIHSARLPQ
Ga0207679_1071748813300025945Corn RhizosphereMESKVAKEAEWALMESTQRLGFEERLDAFLAHCRLVMAPYEPGQ
Ga0207668_1069399323300025972Switchgrass RhizosphereMDSKVANEAEHALVEATQRLSPEEGLNAFLAHCRLVMDLFDAGQKIRASEQRTSSP
Ga0207675_10002696943300026118Switchgrass RhizosphereMESKLAKEAERALVEATQRMSPEERLNSFLEHCRLVTELYEAGLKLQPPPQAQS
Ga0209688_104569223300026305SoilESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP
Ga0209154_101806953300026317SoilMESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKLQIRQTQRQP
Ga0209471_112229633300026318SoilKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP
Ga0209152_1043980713300026325SoilMESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQI
Ga0209378_119570413300026528SoilLRGMESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP
Ga0179587_1000636033300026557Vadose Zone SoilMKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPRP
Ga0179587_1054176413300026557Vadose Zone SoilMESKLAKAAEKSLVEATQKLCPEERLNAFLEHCRLVTQWYEAGQKLRSPG
Ga0208042_111786623300027568Peatlands SoilMESKLAKEAERALVEATQQLSPEERLNAFLAHCRLVMELYEAGQKMRARTPQPRS
Ga0209217_110481423300027651Forest SoilMESKVAKEAERALIEATQRLSPEERLNAFLEHCRLVTQLYEAGEKLRSHPLLQKP
Ga0209772_1028993813300027768Bog Forest SoilMESKVAKEAERALIDATQRLSPEERLNAFLEHCRLVTQLYQAGEQVRART
Ga0209208_1012353013300027807Host-AssociatedDQRAVAQHGLDIMESTLAKDAELALVEATQRLSPEQRVEAFLAHSRLMVELYAAGRELRAAEPKLRP
Ga0209274_10000023613300027853SoilMKSKLAEAAEKALVEATQRLSPEQRVNAFLAHCRLIMQLYEAGQKLRSHAAHSQS
Ga0209611_1003328623300027860Host-AssociatedMESKLAKQAERALVDATQTLKPEQRVNAYLAHCRLVMQLHEAGRKLRADAAPPPP
Ga0209167_1025340423300027867Surface SoilMKSKLAEAAERALVDATQRLSPEQRVNAYLAHCRLITQLYEAGRKLRSQAAHL
Ga0209275_1080196023300027884SoilKSKLAEAAERALVDATQRLSPEQRVNAYLAHCRLITQLYEAGRKLRSQAAHLQS
Ga0209488_1086736633300027903Vadose Zone SoilMESKIAKAAERGLVEATQRLSPEERLNAFLEHCRLVMELYEAGAKIRARVLRSQ
Ga0209006_1117875823300027908Forest SoilKGMKSKLAEKAEQALIEATQKLSPEERLNAFLEHCRLITELSEAGQQIRAGGTPQPKP
Ga0209168_1013850713300027986Surface SoilMESKVAKQAERALVEATQRLSPEERLNAFLAHCRLVIELHEAGQKVQRRSTQRQT
Ga0137415_1029240733300028536Vadose Zone SoilMKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPQPRP
Ga0302234_1042821923300028773PalsaMKSKLAEEAEQALIEATQKLSPEERLNAFLEHCRLVTELYEAGRQIRAGGTPQPKP
Ga0302183_1041786123300030509PalsaMESKVAKEAEQALVEATRRMSPEQRVNAYLAHCRLVMQLYEAGRKLRADAARPTA
Ga0311372_1054284413300030520PalsaMKSKLAEEAEQALIEATQKLSPEERLNAFLKHCQLVMELYEAAEKIRAANLKQPPS
Ga0299915_1063959423300030613SoilMESKLAKQAERALIEATQRLSPEERLNAFLAHCRLVMELYDAGQKMRAREQPAPA
Ga0073996_1012953223300030998SoilVAKEAERALIEDTQRLTPEQRVDAFLAHCRLVMELYEAGRQMRARSAATP
Ga0073995_1011241923300031047SoilMESKVAKEAERALIEDTQRLTPEQRVDAFLAHCRLVMELYEAGRQMRARSAATP
Ga0170824_10736721523300031231Forest SoilMESKLAKDAERALVEATQKMRPEERLNAFLAHCRLVTQLYEAGQRIRSPDAQQPKL
Ga0170824_11500521043300031231Forest SoilMESKLAMEAERQLIEATQSLSPQERLNAMLEHCRLVAELYQAGQELRSRPLLQKL
Ga0170824_12353961723300031231Forest SoilMESKLAKEAERALVEATQKLRPEERLNAFLEHCQLVTQLYEAGQKIRSSDSPLRKP
Ga0302324_10360483113300031236PalsaMESRIAKAAERALVAATQRLTPEERLNAFLVHCRLVTELYEAGRKMRASLPPA
Ga0307513_1020582023300031456EctomycorrhizaVQSKLADEAERALIETTQKMSPEERLNAFLTHCRLMMELYEAGRKVAAAQPRQAS
Ga0170819_1687545323300031469Forest SoilMEAERQLIEATQSLSPQERLNAMLEHCRLVAELYQAGQELRSRPLLQKL
Ga0310686_10669742083300031708SoilMKSKLAEEAEQALIEATQKLCPEERLNAFLEHCRLVTQLHEAGQQLRSTDTPRSTS
Ga0310686_11329906713300031708SoilLAREARQALLAESQLLTPEERLNAFLEHCQLMMALYEAGEKLRSGVLHEHS
Ga0310686_11872835423300031708SoilMKSKPAEEAEQALIEATQKLSPEERLNAFLEHCQVVMELYEAGKKIRAANLRQPPSSKHSPS
Ga0307476_1028980923300031715Hardwood Forest SoilMKSKVAKEAERALVEATQRLSPEERLNAFVAHCRLVMELYEAGQMARSEPVQPQP
Ga0307478_1027093843300031823Hardwood Forest SoilMESKLAKDAEKALIEATQRLCPEERLNAFLQHCRLTMQLFEAGQELRLRTSQQKL
Ga0307478_1050721223300031823Hardwood Forest SoilMKSKVAKEAERALVEATQRLSPEERLNAFVAHCRLVMELYEAGQTARSEPAQPQP
Ga0306921_1033401133300031912SoilVKSKLNQEADRRLVDATQQLSPEERSNAFLTHCRLVMELYEIGRELEARTGRPQS
Ga0335085_1112794013300032770SoilMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGRKTRTAQPQP
Ga0335075_1017777523300032896SoilMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARTAQPQP
Ga0299912_1011256123300033489SoilMESKIAKEAERALVDATQRLSPEERVNAFLAHCRLVMDLYEAGQRSRALAKPPQP
Ga0371487_0011135_1891_20583300033982Peat SoilMESKLAKEAERALVDATQRLSPEGRLNAFLAHCRLVMELHEAGKKMRLRPLRPQS
Ga0372943_0773237_293_4603300034268SoilMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARSQSAQPQP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.