Metagenome Family F056456

Basic Information
Family ID	F056456
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	43 residues
Representative Sequence	VPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP
Number of Associated Samples	113
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.74 %
% of genes near scaffold ends (potentially truncated)	97.81 %
% of genes from short scaffolds (< 2000 bps)	89.05 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Bacteria (85.401 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.387 % of family members)
Environment Ontology (ENVO)	Unclassified (39.416 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.336 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 20.59% Coil/Unstructured: 79.41%
Feature Viewer

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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00496	SBP_bac_5	13.14
PF13633	Obsolete Pfam Family	10.22
PF07963	N_methyl	6.57
PF13544	Obsolete Pfam Family	4.38
PF06750	DiS_P_DiS	2.92
PF01314	AFOR_C	2.92
PF08334	T2SSG	2.92
PF03631	Virul_fac_BrkB	0.73
PF00112	Peptidase_C1	0.73
PF00821	PEPCK_GTP	0.73
PF08402	TOBE_2	0.73
PF02738	MoCoBD_1	0.73
PF08241	Methyltransf_11	0.73
PF07690	MFS_1	0.73
PF03928	HbpS-like	0.73
PF01068	DNA_ligase_A_M	0.73
PF12019	GspH	0.73
PF04350	PilO	0.73
PF01370	Epimerase	0.73
PF01695	IstB_IS21	0.73
PF02730	AFOR_N	0.73
PF04173	DoxD	0.73
PF00528	BPD_transp_1	0.73
PF00211	Guanylate_cyc	0.73
PF00805	Pentapeptide	0.73
PF00902	TatC	0.73
PF14022	DUF4238	0.73
PF02852	Pyr_redox_dim	0.73
PF04392	ABC_sub_bind	0.73
PF13191	AAA_16	0.73
PF00072	Response_reg	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1989	Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase	Cell motility [N]	8.76
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	3.65
COG3167	Type IV pilus assembly protein PilO	Cell motility [N]	1.46
COG0805	Twin-arginine protein secretion pathway component TatC	Intracellular trafficking, secretion, and vesicular transport [U]	0.73
COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent	Energy production and conversion [C]	0.73
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.73
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.73
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.73
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.73
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.73
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.73
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.73
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.40 %
Unclassified	root	N/A	14.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.40 %
Unclassified	root	N/A	14.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.40 %
Unclassified	root	N/A	14.60 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	32.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	20.44 %
Unclassified	root	N/A	14.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	32.12 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19.71 %
Unclassified	root	N/A	14.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	32.12 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.71 %
Unclassified	root	N/A	14.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.73 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.73 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	29.20 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	18.25 %
Unclassified	root	N/A	14.60 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.73 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.73 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.73 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	29.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.25 %
Unclassified	root	N/A	14.60 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.73 %
Methylovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum	0.73 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.73 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.73 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	29.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.25 %
Unclassified	root	N/A	14.60 %
Phycicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus	0.73 %
Methylovulum psychrotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → Methylovulum psychrotolerans	0.73 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.73 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	0.73 %
Marmoricola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola	0.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	29.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.25 %
Unclassified	root	N/A	14.60 %
Phycicoccus elongatus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus elongatus	0.73 %
Paenibacillus baekrokdamisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus baekrokdamisoli	0.73 %
unclassified Marmoricola	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola	0.73 %
Methylovulum psychrotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → Methylovulum psychrotolerans	0.73 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	29.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.25 %
Unclassified	root	N/A	14.60 %
Phycicoccus elongatus Lp2	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus elongatus → Phycicoccus elongatus Lp2	0.73 %
Marmoricola sp. Leaf446	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola → Marmoricola sp. Leaf446	0.73 %
Paenibacillus baekrokdamisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus baekrokdamisoli	0.73 %
Methylovulum psychrotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → Methylovulum psychrotolerans	0.73 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004267\|Ga0066396_10087436	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005178\|Ga0066688_10696957	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005332\|Ga0066388_100346701	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2131	Open in IMG/M
3300005332\|Ga0066388_106787370	Not Available	576	Open in IMG/M
3300005445\|Ga0070708_102270082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300005446\|Ga0066686_10919162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300005468\|Ga0070707_101313928	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	689	Open in IMG/M
3300005557\|Ga0066704_10893520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300005558\|Ga0066698_10401868	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	941	Open in IMG/M
3300005559\|Ga0066700_10150606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1576	Open in IMG/M
3300005561\|Ga0066699_10006443	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5349	Open in IMG/M
3300005563\|Ga0068855_101662788	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	652	Open in IMG/M
3300005568\|Ga0066703_10287210	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	996	Open in IMG/M
3300005569\|Ga0066705_10815743	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300005598\|Ga0066706_11489399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300005764\|Ga0066903_106208192	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005841\|Ga0068863_101106665	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	797	Open in IMG/M
3300005842\|Ga0068858_102571858	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300006796\|Ga0066665_11040916	Not Available	626	Open in IMG/M
3300006800\|Ga0066660_10911358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300006846\|Ga0075430_101288688	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300006871\|Ga0075434_101456124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300007255\|Ga0099791_10160079	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1054	Open in IMG/M
3300007265\|Ga0099794_10436005	Not Available	686	Open in IMG/M
3300009038\|Ga0099829_10817347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300009088\|Ga0099830_11016304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300009088\|Ga0099830_11223749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300009089\|Ga0099828_11692548	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300009090\|Ga0099827_11252323	Not Available	645	Open in IMG/M
3300009092\|Ga0105250_10314820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus elongatus → Phycicoccus elongatus Lp2	679	Open in IMG/M
3300009098\|Ga0105245_12299334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300009137\|Ga0066709_102583068	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	681	Open in IMG/M
3300009162\|Ga0075423_12583296	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300009176\|Ga0105242_12012572	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300009792\|Ga0126374_11206118	Not Available	606	Open in IMG/M
3300010046\|Ga0126384_11136042	Not Available	718	Open in IMG/M
3300010048\|Ga0126373_10894104	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300010301\|Ga0134070_10114258	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	949	Open in IMG/M
3300010320\|Ga0134109_10266143	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300010320\|Ga0134109_10351785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300010325\|Ga0134064_10109332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300010336\|Ga0134071_10133005	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1202	Open in IMG/M
3300010358\|Ga0126370_10382962	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300010358\|Ga0126370_11769939	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010359\|Ga0126376_11203700	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	772	Open in IMG/M
3300010359\|Ga0126376_12555450	Not Available	559	Open in IMG/M
3300010366\|Ga0126379_11432807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300010376\|Ga0126381_103986039	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300010398\|Ga0126383_10057234	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3282	Open in IMG/M
3300010398\|Ga0126383_10070019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3012	Open in IMG/M
3300010398\|Ga0126383_11631742	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	734	Open in IMG/M
3300010398\|Ga0126383_12919179	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010403\|Ga0134123_11584161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus baekrokdamisoli	702	Open in IMG/M
3300011269\|Ga0137392_11457052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300011269\|Ga0137392_11552774	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300011271\|Ga0137393_10372315	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300012096\|Ga0137389_10275562	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1419	Open in IMG/M
3300012189\|Ga0137388_10274559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1540	Open in IMG/M
3300012189\|Ga0137388_10994173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300012189\|Ga0137388_11808563	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012199\|Ga0137383_10665400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300012201\|Ga0137365_10079089	All Organisms → cellular organisms → Bacteria	2479	Open in IMG/M
3300012201\|Ga0137365_10306697	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300012203\|Ga0137399_11550932	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	550	Open in IMG/M
3300012204\|Ga0137374_11080855	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012206\|Ga0137380_10460224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1124	Open in IMG/M
3300012206\|Ga0137380_11365554	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	593	Open in IMG/M
3300012207\|Ga0137381_10644872	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	922	Open in IMG/M
3300012207\|Ga0137381_10828679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300012208\|Ga0137376_11276671	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012209\|Ga0137379_10386416	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1309	Open in IMG/M
3300012209\|Ga0137379_11606385	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300012353\|Ga0137367_10175182	Not Available	1560	Open in IMG/M
3300012357\|Ga0137384_11125342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300012359\|Ga0137385_10191333	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300012363\|Ga0137390_11024791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300012517\|Ga0157354_1075599	Not Available	536	Open in IMG/M
3300012917\|Ga0137395_10590575	Not Available	802	Open in IMG/M
3300012925\|Ga0137419_10243952	Not Available	1351	Open in IMG/M
3300012948\|Ga0126375_11142981	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	644	Open in IMG/M
3300012971\|Ga0126369_13279033	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012976\|Ga0134076_10112994	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300015371\|Ga0132258_12442969	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1308	Open in IMG/M
3300016270\|Ga0182036_10032141	All Organisms → cellular organisms → Bacteria	3134	Open in IMG/M
3300016341\|Ga0182035_11813915	Not Available	552	Open in IMG/M
3300018000\|Ga0184604_10333742	Not Available	538	Open in IMG/M
3300018059\|Ga0184615_10062113	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300018468\|Ga0066662_11834094	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300025160\|Ga0209109_10051855	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300025164\|Ga0209521_10280455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300025318\|Ga0209519_10629232	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300025325\|Ga0209341_10264736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola → Marmoricola sp. Leaf446	1422	Open in IMG/M
3300025326\|Ga0209342_10992448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300025327\|Ga0209751_10012872	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	7457	Open in IMG/M
3300025327\|Ga0209751_11192118	Not Available	558	Open in IMG/M
3300025538\|Ga0210132_1049485	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300025560\|Ga0210108_1045574	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300025922\|Ga0207646_11426545	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	601	Open in IMG/M
3300026035\|Ga0207703_10432378	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300026309\|Ga0209055_1025059	All Organisms → cellular organisms → Bacteria	2805	Open in IMG/M
3300026318\|Ga0209471_1336523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300026333\|Ga0209158_1031333	All Organisms → cellular organisms → Bacteria	2297	Open in IMG/M
3300026371\|Ga0257179_1016400	Not Available	827	Open in IMG/M
3300026494\|Ga0257159_1059989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	650	Open in IMG/M
3300026507\|Ga0257165_1115159	Not Available	502	Open in IMG/M
3300026514\|Ga0257168_1075555	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	745	Open in IMG/M
3300026528\|Ga0209378_1309159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300026532\|Ga0209160_1167681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	959	Open in IMG/M
3300026536\|Ga0209058_1149630	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1098	Open in IMG/M
3300026540\|Ga0209376_1256772	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	742	Open in IMG/M
3300026548\|Ga0209161_10363291	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	644	Open in IMG/M
3300027655\|Ga0209388_1061481	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1083	Open in IMG/M
3300027846\|Ga0209180_10630150	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300027846\|Ga0209180_10811337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300027862\|Ga0209701_10402284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	763	Open in IMG/M
3300027875\|Ga0209283_10091662	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300027875\|Ga0209283_10269712	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1127	Open in IMG/M
3300027882\|Ga0209590_10487397	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	796	Open in IMG/M
3300027882\|Ga0209590_10731446	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027882\|Ga0209590_10796893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300027882\|Ga0209590_10958651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300031545\|Ga0318541_10035169	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2510	Open in IMG/M
3300031640\|Ga0318555_10717459	Not Available	540	Open in IMG/M
3300031682\|Ga0318560_10574340	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300031751\|Ga0318494_10202943	Not Available	1130	Open in IMG/M
3300031770\|Ga0318521_10048072	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300031770\|Ga0318521_10204049	Not Available	1143	Open in IMG/M
3300031820\|Ga0307473_10249796	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1087	Open in IMG/M
3300032039\|Ga0318559_10342004	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300032174\|Ga0307470_11297402	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300032180\|Ga0307471_100878822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → Methylovulum psychrotolerans	1063	Open in IMG/M
3300032205\|Ga0307472_102194252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300032205\|Ga0307472_102439079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300032401\|Ga0315275_10064107	All Organisms → cellular organisms → Bacteria	3957	Open in IMG/M
3300033807\|Ga0314866_034188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	793	Open in IMG/M
3300034125\|Ga0370484_0173659	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.97%
Host-Associated	Host-Associated	8.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.32%
Plants	Host-Associated → Plants	8.03%
Aquatic	Environmental → Aquatic	3.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.65%
Marine	Environmental → Aquatic → Marine	1.46%
Sediment	Environmental → Aquatic → Sediment	1.46%
Freshwater	Environmental → Aquatic → Freshwater	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.83%
Loam	Environmental → Terrestrial → Soil → Loam	8.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.46%
Lake	Environmental → Aquatic → Freshwater → Lake	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.92%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.19%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.19%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.73%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.73%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056456

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066396_100874362	3300004267	Tropical Forest Soil	TNGLNQVAGPFMANVPHPPPGGTPVWSAYAYNSTTAGTFTITANGDNTTITVP*
Ga0066688_106969572	3300005178	Soil	VPTPPPGGSPAWLSTYTYTSSSTGTFSVTASGDGTTITAQ*
Ga0066388_1003467011	3300005332	Tropical Forest Soil	MASVPNPPSGGSPAWGAYTYTSSTTGTFSITNMGDGTTVTAP*
Ga0066388_1067873702	3300005332	Tropical Forest Soil	SAGPFVTSIPMLPPGGSPAWGAAYTYTSSTVGTFSITVWGDGTKITATGDGTTVTAP*
Ga0070708_1022700821	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VPPPGGSPAWGGAYTYTPNAGAGTFTVSATGDGTTITVP*
Ga0066686_109191621	3300005446	Soil	NGLGQSAGPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP*
Ga0070707_1013139282	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	NQSAGPFMASVPAPPPGGTPAWGAYAYASSTAGTFTITATGDGTTITVP*
Ga0066704_108935202	3300005557	Soil	FVARVPTPPPGGSPAWSGTYTYTSSSTGTFSISANGDGTTITVP*
Ga0066698_104018681	3300005558	Soil	PPGGSPAWGGAYTYTPNAGAGTFTVSATGDGTTITVP*
Ga0066700_101506061	3300005559	Soil	LGQAAGPFMARVPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP*
Ga0066699_100064436	3300005561	Soil	PGGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITFP*
Ga0068855_1016627881	3300005563	Corn Rhizosphere	VPPPGGSPAWGANYTYAPNAGAGTFTVSATGDGTTVTVP*
Ga0066703_102872101	3300005568	Soil	TPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP*
Ga0066705_108157431	3300005569	Soil	TPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITMQ*
Ga0066706_114893991	3300005598	Soil	NGLGQSAGPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITIP*
Ga0066903_1062081922	3300005764	Tropical Forest Soil	GALQVPQGGTPAWGAYTYTSSTAGTFRIDVAGDGTTITAP*
Ga0068863_1011066652	3300005841	Switchgrass Rhizosphere	VPVPPPGGSPAWGANYTYAPNAGAGTFTVSATGDGTTVTVP*
Ga0068858_1025718582	3300005842	Switchgrass Rhizosphere	PPPGGSPAWGANYTYTPNAAAGTFVVTATGDSTTITVP*
Ga0066665_110409162	3300006796	Soil	PFIARIPTPPGGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITFP*
Ga0066660_109113581	3300006800	Soil	GLGQSAGPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP*
Ga0075430_1012886881	3300006846	Populus Rhizosphere	PPSGGSPAWSSSYTYTSTTSGSFSVTANGDGVTVVAP*
Ga0075434_1014561242	3300006871	Populus Rhizosphere	GPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP*
Ga0099791_101600791	3300007255	Vadose Zone Soil	LTDLTQQTANGLGQNAGPFIARVPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP*
Ga0099794_104360052	3300007265	Vadose Zone Soil	PTPPGGGAPAWSATYTYTSSSTGTFSITANGDSTTITYP*
Ga0099829_108173472	3300009038	Vadose Zone Soil	MANVPTPPPGGSPAWSGAYTYTSSSTGTFSITANGDGTTVTVP*
Ga0099830_110163043	3300009088	Vadose Zone Soil	PPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP*
Ga0099830_112237491	3300009088	Vadose Zone Soil	MARIPTPPPGGSPAWSGAYTYTSSTTGTFSVTANGDGTTITVP*
Ga0099828_116925482	3300009089	Vadose Zone Soil	PPPGGSPAWSGAYTYTSSTTGTFSVTANGDGTTITVP*
Ga0099827_112523232	3300009090	Vadose Zone Soil	GGSPAWSGAYTYTSSTTGTFSVTANGDGTTITVP*
Ga0105250_103148202	3300009092	Switchgrass Rhizosphere	PTPPATWSATYTYVANQAAGTFSISATGDSTTITVP*
Ga0105245_122993341	3300009098	Miscanthus Rhizosphere	PGGSPAWGATYTYTPNAAAGTFSISATGDGTTITVP*
Ga0066709_1025830682	3300009137	Grasslands Soil	SVPTPPPSGSPAWSGTYTYTSSTTGTFSVTANGDGTTITVQ*
Ga0075423_125832962	3300009162	Populus Rhizosphere	QVAGPFMARIPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP*
Ga0105242_120125722	3300009176	Miscanthus Rhizosphere	MGSIPVPPTGGSPAWGNSYTYTPNAATGTFVVTATGDNTTNTVP*
Ga0126374_112061181	3300009792	Tropical Forest Soil	ERRTFRVFSPAPPWGGSPAWGAYTYTWSTAGTFSIIAIGDGTTVTAP*
Ga0126384_111360422	3300010046	Tropical Forest Soil	FVTSIPHPPLGGSPAWGAYTYTSSTAGTFSIIATGDGTTVTAP*
Ga0126373_108941043	3300010048	Tropical Forest Soil	WGAYTYTSSTAGTFRIDVAGDGTTITATGDGTTITAP*
Ga0134070_101142582	3300010301	Grasslands Soil	PFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP*
Ga0134109_102661433	3300010320	Grasslands Soil	QAAGPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP*
Ga0134109_103517851	3300010320	Grasslands Soil	FVARVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP*
Ga0134064_101093322	3300010325	Grasslands Soil	VPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP*
Ga0134071_101330053	3300010336	Grasslands Soil	GTVPVPPPGGSPAWGAAYTYTPNAGAGTFSVTATGDGTTVTVP*
Ga0126370_103829623	3300010358	Tropical Forest Soil	AQIPVPPPGGTPGWGGAYTYTSSTAGTFSITATGDGTTVTSP*
Ga0126370_117699392	3300010358	Tropical Forest Soil	GPFMASVPSPPPGGSPAWGTYTYTSSTAGTFSIVATGDGTTITVP*
Ga0126376_112037001	3300010359	Tropical Forest Soil	PQPPPGGSPVWSAYAYNSTTAGTFTITANGDNTTITVP*
Ga0126376_125554501	3300010359	Tropical Forest Soil	ERAGPFTDSVPHPPLGGTPPWGSYTFTSSSTGTFSIMAVGDGTTFVVP*
Ga0126379_114328071	3300010366	Tropical Forest Soil	PLIPVPPRGGTPAWSAAYTYTSSTTGTFSITAAGDGTTVTAP*
Ga0126381_1039860391	3300010376	Tropical Forest Soil	PPPGGSPAWGGAYTYTSSTAGTFSITATGDGTTVTVP*
Ga0126383_100572341	3300010398	Tropical Forest Soil	WVPRPPSGGTPAWGAYTYTSSTAGTFSVTASGDGTTITLP*
Ga0126383_100700191	3300010398	Tropical Forest Soil	IPHPPLGGSPAWGAYTYTSSTAGTFSIIATGDGTTVTAP*
Ga0126383_116317422	3300010398	Tropical Forest Soil	FMASIPNPPPGGSPAWGGNYTYTSSTAGTFSITATGDGTTITVP*
Ga0126383_129191791	3300010398	Tropical Forest Soil	SVPQPPPGGSPAWGAYTYTSSTAGTFSIVATGDGTTITVP*
Ga0134123_115841611	3300010403	Terrestrial Soil	PGGSPAWGASYTYTPNAGAGTFTVAATGDGTTITMP*
Ga0137392_114570521	3300011269	Vadose Zone Soil	LGQNAGPFIARVPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP*
Ga0137392_115527742	3300011269	Vadose Zone Soil	PFMASVPAPPPGGTPAWGAYAYASSTAGTFTVTATGDGTTITVP*
Ga0137393_103723151	3300011271	Vadose Zone Soil	IPAPGGSPAWSGTYTYTSSSTGTFSITATGDGTTITIP*
Ga0137389_102755621	3300012096	Vadose Zone Soil	PPPGGTPAWGAYAYASSTAGTFTITATGDGTTITVP*
Ga0137388_102745591	3300012189	Vadose Zone Soil	ATVPAPPPGGTPPWGAYAYASSSTGTFVVTATGDGTTITLP*
Ga0137388_109941731	3300012189	Vadose Zone Soil	PIPAPGGSPAWSGTYTYTSGSTGTFSITATGDGTTITVP*
Ga0137388_118085631	3300012189	Vadose Zone Soil	PPGGSPAWSGAYTYTSSTTGTFSVTANGDGTTITVP*
Ga0137388_118172291	3300012189	Vadose Zone Soil	NLTDLTQQTANGLGQNAGPFIARVPAVPPGGSPAWAGYTYTSSSAGTFSVTANGDGTTITVP*
Ga0137383_106654001	3300012199	Vadose Zone Soil	VNDRNQSAGPFIATVPPPPYGGTPAWGAYAYTSSSTGTFSVTAIGDGTTITVP*
Ga0137365_100790891	3300012201	Vadose Zone Soil	TPPPSGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVQ*
Ga0137365_103066973	3300012201	Vadose Zone Soil	PAPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP*
Ga0137399_115509321	3300012203	Vadose Zone Soil	TAGPFMANVPNPPPGGSPAWGAYAYTSSTAGTFSITATGDGTTITVP*
Ga0137374_110808551	3300012204	Vadose Zone Soil	MASVPAPPAGGTPAWGVYGYTTNANGTFTVTATGDGTTITVP*
Ga0137380_104602241	3300012206	Vadose Zone Soil	QSAGPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP*
Ga0137380_113655541	3300012206	Vadose Zone Soil	LNQSAGPFMAAVPAPPPGGTPAWGAYAYASSTAGTFTITATGDGTTITVP*
Ga0137381_106448722	3300012207	Vadose Zone Soil	GQSAGPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP*
Ga0137381_108286792	3300012207	Vadose Zone Soil	LGQSAGPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITIP*
Ga0137376_112766711	3300012208	Vadose Zone Soil	FVARVPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP*
Ga0137379_103864161	3300012209	Vadose Zone Soil	PPPGGSPTWSGTYAYTSSSTGTFSVTANGDGTTITMQ*
Ga0137379_116063851	3300012209	Vadose Zone Soil	PPAPGDSPAWSGAYTYTSSSTGTFSITANGDGSTVTVP*
Ga0137367_101751821	3300012353	Vadose Zone Soil	IPTPPGGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITFP*
Ga0137384_111253421	3300012357	Vadose Zone Soil	NGLGQNAGPFIARVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP*
Ga0137385_101913333	3300012359	Vadose Zone Soil	FMGSVPVPPPGGSPAWGGSYTYTPNAGAGTFTVAATGDGTTISVP*
Ga0137390_110247911	3300012363	Vadose Zone Soil	LGQSAGPFMARVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITIP*
Ga0157354_10755991	3300012517	Unplanted Soil	RPPSGGTPAWGAYTYTSSTVGTLSVTASGDGTTITLP*
Ga0137395_105905752	3300012917	Vadose Zone Soil	PDRSMANVPTPPPGGSPVWSGAYTYTSSSTGTFSITASGDNTTITVP*
Ga0137419_102439522	3300012925	Vadose Zone Soil	DLTQQTANGLGQNAGPFIARVPTPPGGGSPAWSGTYTYTSSSTGTFSITANGDGTTITFP
Ga0126375_111429812	3300012948	Tropical Forest Soil	SVPAPPPGGSPAWGAYLYTSSSAGTFTITASGDGTTVTVP*
Ga0126369_132790332	3300012971	Tropical Forest Soil	TPPPGGSPAWSAAYTYTSSSTGTFSITSNGDNTTITLP*
Ga0134076_101129941	3300012976	Grasslands Soil	GGSPAWGGAYTYTPNAGAGTFTVSATGDGTTVTVP*
Ga0132258_124429691	3300015371	Arabidopsis Rhizosphere	PPPGGSPAWGASYTYTPNAGAGTFSITATGDGTTVTVP*
Ga0182036_100321415	3300016270	Soil	GPFMPLIPVPSWGGSPAWGLYIYTSSIAGTFSITASGDGTTITVP
Ga0182035_118139151	3300016341	Soil	WSAGPFMPLIPVPSWGGSPAWGLYIYTSSIAGTFSITASGDGTTITVP
Ga0184604_103337421	3300018000	Groundwater Sediment	TVPPPPYGGTPAWGAYAYTLSSTGTFSVTATGDGTTITVP
Ga0184615_100621131	3300018059	Groundwater Sediment	AGPFMASVPAPPPGGTPAWGAYGYASSTAGTFSVTATGDGTTITVP
Ga0066662_118340941	3300018468	Grasslands Soil	PPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP
Ga0209109_100518551	3300025160	Soil	PAPPPGGTPAWGAYGYASSTAGTFSITATGDGTTITVP
Ga0209521_102804553	3300025164	Soil	QSAGPFMASVPAPPPGGTPAWGAYGYASSTAGTFSITATGDGTTITVP
Ga0209519_106292321	3300025318	Soil	GPFMASVPAPPPGGTPAWGAYGYASSTAGTFSITATGDGTTITVP
Ga0209341_102647363	3300025325	Soil	PPGGTPAWGAYGYTSSTAGTFSITATGDGTTITVP
Ga0209342_109924483	3300025326	Soil	PPPGGTPSWGAYTYTSSTAGTFSIVGTGDGTTITVP
Ga0209751_100128721	3300025327	Soil	ASVPAPPPGGTPSWGAYTYTSSTAGTFSIVGTGDGTTITVP
Ga0209751_111921182	3300025327	Soil	PPGGTPAWGAYGYASSTAGTFSITATGDGTTITVP
Ga0210132_10494851	3300025538	Natural And Restored Wetlands	GLNQSAGPFMASVPAPPPGGTPAWGAYAYTANTNGTFTITATGDGTTITVP
Ga0210108_10455741	3300025560	Natural And Restored Wetlands	PAGGTPPWPAAYTYTPNFATGQFSISATGDGTTVAVP
Ga0207646_114265451	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ILGHIAGPFIASVPTPPPSGSPAWSGTYTYTSSTTGTFSVTANGDGTTITVQ
Ga0207703_104323783	3300026035	Switchgrass Rhizosphere	GPFLGSVPVPPPGGSPAWGANYTYTPNAAAGTFVVTATGDSTTITVP
Ga0209055_10250594	3300026309	Soil	TTTGLGQSAGPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP
Ga0209471_13365231	3300026318	Soil	GPFIATVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITVP
Ga0209158_10313335	3300026333	Soil	GPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP
Ga0257179_10164001	3300026371	Soil	IARIPTPPGGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITFP
Ga0257159_10599891	3300026494	Soil	QSAGPFITTVPPPPHGGEPAWGAYTYMSSGAGTFLVTATGDGTTITVP
Ga0257165_11151591	3300026507	Soil	FMASVPAPPPGGSPAWGAYAYTSSTAGTFTITATGDGTTITVP
Ga0257168_10755553	3300026514	Soil	TPPPGGSPAWSLAYTYTSSSTGTFSVTANGDATTITVP
Ga0209378_13091591	3300026528	Soil	IARIPTPPGGGSPAWSGTYTYTSSSTGTFSVSANGDGTTITFP
Ga0209160_11676813	3300026532	Soil	PPAGGAPAWSGTYTYTSSSTGTFSITANGDGTTITVP
Ga0209058_11496302	3300026536	Soil	LGTVPVPPPGGSPAWGAAYTYTPNAGAGTFSVTATGDGTTVSLP
Ga0209376_12567723	3300026540	Soil	SAGPFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSVTANGDGTTITVP
Ga0209161_103632912	3300026548	Soil	TDLTQATTNILGHTAGPFIASVPMPPPGGSPTWSGTYAYTSSSNGTFSVTANGDGTTITM
Ga0209388_10614811	3300027655	Vadose Zone Soil	LAGPFMARIPTPPPGGTPAWSGTYTYTSSSTGTFSVTANGDGTTITVP
Ga0209180_106301502	3300027846	Vadose Zone Soil	AAPPPGGTPAWGAYAYASSTAGTFTITATGDGTTITVP
Ga0209180_108113371	3300027846	Vadose Zone Soil	TANGLGQNAGPFIARVPAVPPGGSPAWAGYTYTSSSAGTFSVTANGDGTTITVP
Ga0209701_104022841	3300027862	Vadose Zone Soil	PFVARVPTPPPGGSPAWSGAYTYTSSSTGTFSVTANGDGTTITVP
Ga0209283_100916621	3300027875	Vadose Zone Soil	PPGGAPAWSATYTYTSSSTGTFSITANGDGTTITIP
Ga0209283_102697121	3300027875	Vadose Zone Soil	PPPGGSPAWSGAYTYTSSTTGTFSVTANGDGTTITVP
Ga0209590_104873971	3300027882	Vadose Zone Soil	MASVPAPPPGGTPAWGAYAYASSTAGTFTITATGDGTTITVP
Ga0209590_107314461	3300027882	Vadose Zone Soil	TPPPGGSPAWSGAYTFTSSSTGTFSITANGDGTTITVP
Ga0209590_107968931	3300027882	Vadose Zone Soil	PFVARVPTPPPGGSPAWSGTYTYTSSSTGTFSITANGDGTTITIP
Ga0209590_109586511	3300027882	Vadose Zone Soil	RIPTPPPGGSPAWSGAYTYTSSTTGTFSVTANGDGTTITVP
Ga0318541_100351694	3300031545	Soil	QSAGPFMASIPNPPPGGSPAWGAYNYTSSTAGTFTITATGDGTTITVP
Ga0318555_107174591	3300031640	Soil	PLIPVPSWGGSPAWGLYIYTSSIAGTFSITASGDGTTITVP
Ga0318560_105743401	3300031682	Soil	QPPPGGSPAWGNYTYTSSTAGTFTITATGDGTTITVP
Ga0318494_102029432	3300031751	Soil	LPMPASGGSPAWGAYTYTSSTAGTFSITATGDGTTVTAP
Ga0318521_100480723	3300031770	Soil	NQSAGPFMASIPNPPPGGSPAWGAYNYTSSTAGTFTITATGDGTTITVP
Ga0318521_102040492	3300031770	Soil	LIPVPSWGGSPAWGLYIYTSSIAGTFSITASGDGTTITVP
Ga0307473_102497961	3300031820	Hardwood Forest Soil	PPGGTPAWGAYAYASSTAGTFTVTGTGDGTTITVP
Ga0318559_103420042	3300032039	Soil	FMPLVPRPPSGGSPPWGAYTYTSSTSGTFSVTATGDGTTITLP
Ga0307470_112974022	3300032174	Hardwood Forest Soil	SAGPFVATVPPPPFGGTPPWGAFAYQSSTAGTFIITATGDGTTITFP
Ga0307471_1008788223	3300032180	Hardwood Forest Soil	GGTPAWGAVYTYTPNVAAGTFSISATGDGTTITVP
Ga0307472_1021942521	3300032205	Hardwood Forest Soil	SIPAPPPGGSPAWGGNYTYTPNAGAGTFTISATGDGTTITVP
Ga0307472_1024390791	3300032205	Hardwood Forest Soil	PFMGSIPVPPPGGSPAWGGNYTYTPNAGAGTFTVSATGDGTTITVP
Ga0315275_100641075	3300032401	Sediment	PGGTPAWVAYAYAPNAAAGTYTITATGDGTTITVP
Ga0314866_034188_3_116	3300033807	Peatland	SSPPGGSPAWGAYTYTSSSAGTFSITATGDGTTVTVP
Ga0370484_0173659_439_582	3300034125	Untreated Peat Soil	SAGPFMASVPASPPGGTPAWGAYAYTSSTAGTFSITGTGDGTTITVP

Hidden Markov Model


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