Metagenome / Metatranscriptome Family F056450

Basic Information
Family ID	F056450
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	78 residues
Representative Sequence	RLQARYDGKKIARDARKDIFVATDFDGSVSSQLGEPEGATDFCVFVFGRKGELIAQWHGVPSAEQLAAAVK
Number of Associated Samples	114
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	14.60 %
% of genes from short scaffolds (< 2000 bps)	12.41 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Most Common Taxonomy
Group	Unclassified (86.861 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (22.628 % of family members)
Environment Ontology (ENVO)	Unclassified (33.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.854 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.20% β-sheet: 18.18% Coil/Unstructured: 61.62%
Feature Viewer

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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00581	Rhodanese	54.74
PF00899	ThiF	18.98
PF05237	Obsolete Pfam Family	6.57
PF03734	YkuD	2.19
PF06052	3-HAO	2.19
PF13414	TPR_11	0.73
PF13418	Kelch_4	0.73
PF01494	FAD_binding_3	0.73
PF13432	TPR_16	0.73
PF07497	Rho_RNA_bind	0.73
PF09154	Alpha-amy_C_pro	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	2.19
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	2.19
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.46
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.73
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.73
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.73
COG1158	Transcription termination factor Rho	Transcription [K]	0.73

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.86 %
All Organisms	root	All Organisms	13.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.86 %
cellular organisms	root	All Organisms → cellular organisms	13.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.86 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.86 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.19 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_100879334	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300000956\|JGI10216J12902_107649763	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300005180\|Ga0066685_10702029	Not Available	694	Open in IMG/M
3300005295\|Ga0065707_10033753	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300005561\|Ga0066699_10259281	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300005587\|Ga0066654_10421459	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300009137\|Ga0066709_100835369	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300009162\|Ga0075423_11589787	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300010048\|Ga0126373_12310327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300012361\|Ga0137360_10471727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1066	Open in IMG/M
3300012532\|Ga0137373_11101770	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300014157\|Ga0134078_10078105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1201	Open in IMG/M
3300018072\|Ga0184635_10029350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2059	Open in IMG/M
3300018431\|Ga0066655_11135597	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300019361\|Ga0173482_10112244	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300021080\|Ga0210382_10365673	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300026324\|Ga0209470_1209337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	816	Open in IMG/M
3300027018\|Ga0208475_1000677	All Organisms → cellular organisms → Bacteria	2878	Open in IMG/M
3300031231\|Ga0170824_110767929	All Organisms → cellular organisms → Bacteria	3359	Open in IMG/M
3300031715\|Ga0307476_10647005	Not Available	784	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.97%
Host-Associated	Host-Associated	8.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.59%
Plants	Host-Associated → Plants	8.03%
Aquatic	Environmental → Aquatic	4.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.65%
Sediment	Environmental → Aquatic → Sediment	2.92%
Freshwater	Environmental → Aquatic → Freshwater	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.29%
Loam	Environmental → Terrestrial → Soil → Loam	7.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.19%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	29.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	3.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.46%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019872	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026861	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-12 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027461	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-E (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_06204210	2170459003	Grass Soil	HGVNEEARRLQARYDGKGIKRDARKDIFIVTDFDGSASSQLEEAEGATDFCVLVFGRNGKLIAQWRGVPSAEQLAGAVK
E4A_11549440	2170459003	Grass Soil	FDGSVSSQFGEAEGATDFCVFVFGRNGELIAQWRGVPSAEQLAAVVK
E4A_09334200	2170459003	Grass Soil	RHGVNEEARRLQARYDGKGIKRDARKDIFIVTDFDGSASSQLEEAEGATDFCVLVFGRNGKLIAQWRGVPSAEQLAGAVK
L01_02535420	2170459006	Grass Soil	GSASSQLEEAEGATDFCVLVFGRNGKLIAQWRGVPSAEQLAGAVK
F64_03660420	2170459011	Grass Soil	YDGKGIKRDARKDIFIVTDFDGSASSQLEEAEGATDFCVLVFGRNGKLIAQWRGVPSAEQLAGAVK
FE1_06880920	2189573002	Grass Soil	RRHTVVGQRIATALIRHRVNEESKRLQVRYDGKKIMRDARKDIFVATDFDGTVSSQFGEPEGATDFCVFVFGRKGELIAQWHGVPSAEQLAAAVK
INPgaii200_06235862	2228664022	Soil	EAKRLQARYDGKGIARDARKDIFIVTDFDGSASLQLGEPEGTTDFCVFVFGQNGELLAQWHGVPSAEQLAAVVK
F14TC_1008026862	3300000559	Soil	VATDFDGSMSSQLGEPEGATDFCVFVFGRNGELIAQWHGVPSAEQLAAALK*
JGI1027J12803_1008793342	3300000955	Soil	RVPERCLGNPDYRMITTVRFVRKHTVVGRKIATAFIRHRVSEEAKRLQARYDGKKIARDARKDIFVAIDFDGSISSQLGEAEGTADFCVFVFGRNGELMAQWHGVPSAEQLATALK*
JGI1027J12803_1018771041	3300000955	Soil	MAVVRHRVTEEAKRLQSRYDTNKIMRDARQDNFNVTDFDGTVSSQLGEPAGATVFCVFVFGRDGKLLARWTDVPSTNQLADVVK*
JGI10216J12902_1018447022	3300000956	Soil	AKRLQARYDGKKIARDARKDIFVATDFDGLMSSQLGEPEGATDFSVFVFGRKGELIARWNGVPSTEQLAAAFK*
JGI10216J12902_1073260112	3300000956	Soil	EARRLQARYNAKSIARDARKDIFTVTDFDGTISSQLGEPAGAADFCVFVFGRNGELRAQWHGVPSAEQLAAAVK*
JGI10216J12902_1076497631	3300000956	Soil	RTVGDRVPEHCLGNPDYRMITVIRFTRRHTVVGQRIATAFIRHRVNEEAKRLQARYEAKKIARDAREDVFVATDFDGSMSSQLGEPKGATDFCVFVFGRKGELIAQWRGVPSAEQLAVALK*
JGI10216J12902_1190933791	3300000956	Soil	IKRDARKDIFIVTDFDGSVSSQLGEAESETVFCVSVFGRNGELRAQWHGVPGAEQLAAAVK*
JGIcombinedJ43975_100808972	3300002899	Soil	HRVNEEANRLQARYDGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK*
JGI25382J43887_104183421	3300002908	Grasslands Soil	DIFTVTDFDGSGSSQLGESGGATDFCVFVFGRRGELLAQWHGVPDAKQLAAVVK*
Ga0062593_1030388111	3300004114	Soil	RDARKDIFVATDFDGSVSSQFGEPEGATDFCVFVFGRKGELIAQWHGIPSAEQLATALK*
Ga0063356_1047219882	3300004463	Arabidopsis Thaliana Rhizosphere	RKIATAFIRHRVNEEAKRLQTRYDVKKIVRAARKDLFVATDFDGSMSSQLGEPEGVTDFCVFVFGRNGELIAQWHGVPSAEQLAVALK*
Ga0062595_1019523962	3300004479	Soil	TIVRFVRRHTVVGRKIATAFIRHRVNEEANRLQARYDGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK*
Ga0062595_1025300221	3300004479	Soil	YDVKKIVRAARKDLFVATDFDGSMSSQLGEPEGVTDFCVFVFGRNGELIAQWHGVPSAEQLAVALK*
Ga0066680_107662221	3300005174	Soil	EEARRLQTRYDAKKIARDARPDIFTVTDFDGSGSSQLGESGGATDFCVFVFGRRGELLAQWHGVPDAKQLAAVVK*
Ga0066673_100944981	3300005175	Soil	HTVVGRTIAITFIRHRVNEEAKRLQARYDAKKIVRDARKDIFVATDFDGSMSSQLGEPEGTTDFGVFVFGRNGELIAQWRGVPSAEQLAAAVK*
Ga0066685_107020292	3300005180	Soil	DAHADMFVVTDFDGTVSLQLGEPSGAMDFCVFVFGRTGELLAQWRGVPSAKQLAEVLKS*
Ga0066676_102095602	3300005186	Soil	DAKKIARDARTDIFTVTDFDGSGSSQLGEPAGATDFCVFVFGRNGELLAQWHGVPSAKQLAVVVK*
Ga0066676_111800541	3300005186	Soil	EAKRLQARYDGKKIARDARKDIFVATDFDGSVSSHLGEPEGATDFRVFVFGRNGELIAQWHGVPSAEQFAAAVK*
Ga0066676_111800551	3300005186	Soil	EAKRLQARYDGKKIARDARKDIFVATDFDGSVSSHLGEPERATDFRVFVFGRNGELIAQWHGVPSAEQFAAAVK*
Ga0065707_100337532	3300005295	Switchgrass Rhizosphere	AHTVGDRVPEHCLGNPDYRMITIIRFARRHTVVGRRIATALIRHRVNEEAKRLQARYDGKKIVRDARKDIFVATDFDGSVSSQLGEPEGATDFCVFVFGRKGELIAQWHGVPSAEQLAAAVK*
Ga0066388_1023270152	3300005332	Tropical Forest Soil	HRINEEARRLQLRYDGKGIKRDARKDIFIVTDFDGSVSSQLGEAEGATDFCVFVFGRNGELLAQWHGVPSVEQLAVALK*
Ga0066686_101317593	3300005446	Soil	RLQTRYDAKKIARDARTDIFTVTDFDGSGSSQLGEPAGATDFCVFVFGRNGELLAQWHGVPSAKQLAVVVK*
Ga0070685_116258161	3300005466	Switchgrass Rhizosphere	KKIARDARKDIFVATDFDGAISSQLGEAEGAANFCVFVFGRNGELIAQWHEVPSAEQLATALK*
Ga0070684_1010604252	3300005535	Corn Rhizosphere	DARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRKGELIAQWHGVPGAEQLATALE*
Ga0066697_105902821	3300005540	Soil	DTNKIMRDARQDIFTVVDFDGAVSSQLDEPAGATAFCVFVFGRNGELLAQWHGVPSAKQLAAVVK*
Ga0070686_1017574101	3300005544	Switchgrass Rhizosphere	TDFDGSISSQLGEAEGAANFRVFVFGRKGELIAQWHGVPGAEQLATALE*
Ga0066707_108031442	3300005556	Soil	DGKKIARDARKDIFVATDFDGSVSSQLGEPERATDFRVFVFGRNGELIAQWHGVPSAEQFAAAVK*
Ga0066699_102592811	3300005561	Soil	NPDYRMITIIRFARSHTVIGRKIASTFIRHRVNEEAKRLQARYDAKKILRDARKDIFVATDFDGSMSSQLGEPEGTTDFCVFVFGRNGELIAQWHGVPSGEQLAAALK*
Ga0066699_112418091	3300005561	Soil	DGKKIARDARKDIFVATDFDGSVSSQLGEPEGATDLCVFVFGRNGELIAQWHGVQSAEQLAAAVK*
Ga0066705_105021402	3300005569	Soil	DIFVVTDFDGSVSSQLGEAEGATDFCVFVFGRNGELIAQWRGVPSAEQLAATVK*
Ga0066702_102777132	3300005575	Soil	NEEAKRLQARYDAKKILRDARKDIFVATDFDGSMSSQLGEPEGTTDFCVFVFGRNGELIAQWHGVPSGEQLAAALK*
Ga0066654_104214591	3300005587	Soil	CLGSPDYRMITIIRFARRHTVVGRKIATTFIRHRVNEEAKQLQGRYDAKKIARDARKDIFVATDFDGSMSSQLGEPEGTTDFGVFVFGRNGELIAQWHGVPSAEQLAAALK*
Ga0070762_112371621	3300005602	Soil	RRHTVVGQRIATALIRHRVNEEAKRLQARYEGKKIARDARKDIFVATDFDGSVSSQLGEPEGATDFCVFVFGRNGELIAQWHGVPSAEQLAAAVR*
Ga0070717_109435782	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YDGKKIERDARKDIFVATDFDGSVSSQLGEPNGATDFCVFVFGRKGELIAEWHGVPSAEQLAAAVK*
Ga0066696_106993682	3300006032	Soil	TFIRHRVNEEAKQLQGRYDAKKIARDARKDIFVATDFDGSMSSQLGEPEGTTDFGVFVFGRNGELIAQWHGVPSAEQLAAALK*
Ga0066652_1000741881	3300006046	Soil	DIFVTTDFDGSVSSQFEKAQGAPDFCVFVFGRNGELIAQWHGVPSAEQLASALK*
Ga0066652_1007959041	3300006046	Soil	HTMVGQRIATALIRHRVNEEAKRLQARYDGKKIARDARKDIFVATDFDGSVSSQLGEPERATDFRVFVFGRNGELIAQWHGVPSAEQFAAAVK*
Ga0066659_102290472	3300006797	Soil	RYDAKKIVRDARNDIFVATDFDGSMSSELGEPEGTTDFGIFVFGRNGELIAQWHGVPSAEQLAAALK*
Ga0066660_113397791	3300006800	Soil	MAVVKHRVTEEAKQLQSRYDTNKIMRDARQDIFTVTDFDGTVSPQLGEPAGATDFCVFVFGRKGELLAQWHGVPSAKQLAAVVK*
Ga0075434_1010225721	3300006871	Populus Rhizosphere	KDIFVATDFDGSISSRLGEQEGATDFSVFVFGRNGELVARWSGAPTTEQLAAALK*
Ga0099791_104523191	3300007255	Vadose Zone Soil	NEEAKRLQTRYDGKKIARDARKDIFVATDFDGSVSSQLGEPEGATDFRVFVFGRKGELIAQWHGVPSAEQLAAALKCFRWASLSEVTVYKSC*
Ga0066710_1024019412	3300009012	Grasslands Soil	DARKDIFVATDFDGSMSSQLGEPEGTTDFCVFVFGRNGELIAQWHGVPSGEQLAAALK
Ga0066709_1008353692	3300009137	Grasslands Soil	RMITIIRFARRHTVIGRRIATALIRHRVDEEAKRLQARYDAKKIARDARKDIFVATDVDGSVSSQLGEPEGATDFCVFVFGRNGELIAQWHGVPSAEQLAAAVK*
Ga0066709_1013026752	3300009137	Grasslands Soil	ARDARKDIFTVTDFDGTVSAQLGEPAGATDFCVFVFGRNGELRAQWHGVPTAEQLAAAIK
Ga0075423_115897871	3300009162	Populus Rhizosphere	PDYRMITVIRFVKRHTVVGRRIATAFIRHRVNEEAKRLQVRYDAKKIVRDARKDIFVATDFEGSMSSQLGEPQGATDFCVFVFGRNGELTAQWRGVPSAEQLATAVK*
Ga0126380_100814101	3300010043	Tropical Forest Soil	RRTVVGRRIATAFIRHRVNEEAKRLQARYEEKKIVRDARKDIFVATDFDGSMTSQLGEAERTTDFSVFVFGRNGELIAQWRGVPSAEQLAAAVK*
Ga0126384_103031142	3300010046	Tropical Forest Soil	FVATDFDGSMTSQLGEPERTTDFSVFVFGRNGELIAQWRGVPSAEQLAAAVK*
Ga0126384_103523782	3300010046	Tropical Forest Soil	RFARRHTVVGQRIATAFIRHRVNDEVKRLQARYDVKKIIRDARKDIFVATDFDGSISSQLGEPEGVTDFRVFVFGRKGELIAQWNGVPSAEQLDAALK*
Ga0126382_107532091	3300010047	Tropical Forest Soil	SRLQARYKAKGIERDARKDIFVVTDFGGSISSQFGESTETTDFGVFVFGRNGELLAQWHGVPSAEQLDAAIK*
Ga0126373_123103272	3300010048	Tropical Forest Soil	IRFARRHTAIGQRIAAALVRHGINEEARRLQARYDGKGIQRDARKDIYIVTDFDRAVSSQLGEPAGATDFLVFVFGRNGELIAQWHGVPSADQLAAAVK*
Ga0134088_103422231	3300010304	Grasslands Soil	IIRFARRHTVLGQRIATALIRHRVNEEAKRLQARYDGKKIARDARKDIFVATDFDGSVSSQLGEPERATDFRVFVFRRNGELIAQWHGVPSAEQFAAAVK*
Ga0134088_104606031	3300010304	Grasslands Soil	RRLQTRYDAKKIARDARTDIFTVTDFDGIASPQLGEPAGATDFCVFVFGRQGELLAQWHGLPSAKQLAAVVK*
Ga0134062_100346861	3300010337	Grasslands Soil	IATALIRHRVNEEAKRLQARYDGKKIARDARKDIFVATDFDGSVSSQLGEPERATDFRVFVFRRNGELIAQWHGVPSAEQFAAAVK*
Ga0126376_109281772	3300010359	Tropical Forest Soil	EEAKRLQVRYDAQEIARDARKDVFVATDFDGSISSQLGAAEGSTDFDVFVFGRNGELIAQWHGVPSAEQLDAALK*
Ga0126376_123604182	3300010359	Tropical Forest Soil	KDIFVATDFDGSMTSQLGEPERTTDFSVFVFGRNGELIAQWRGVPSAEQLAAAVK*
Ga0126372_120692922	3300010360	Tropical Forest Soil	RFTRRHLALGRRIATTLVRHRVNEEANRLQARYSAKGIERDARKDVFVVTDFDGSISSQLGDSSGGTDFYVFVFAGNGELLAQWHEVPSAEQLASAVK*
Ga0126372_125372202	3300010360	Tropical Forest Soil	GKRIERDAHKDIFVVTDFEGTVSSQLGEPEAATDFCVFVFGRNGELLAEWRGVPSAEQLAAALK*
Ga0126377_110770471	3300010362	Tropical Forest Soil	KLVTALVRHRVHEQAARLQSRYKGKGIERDARKDILVATDFDGTASSQLGEPTSDTGFSVFVFGRNGELIAEWHDVPSAEQLNAALK*
Ga0134066_103071152	3300010364	Grasslands Soil	ITIIRFARRHTVVGRTIAITFIRHRVNEEAKRLQARYDAKKIVRDARKDIFVATDFDGSMSSQLGEPEGTTDFGVFVFGRNGELIAQWRGVPSAEQLAAAVK*
Ga0137388_101253451	3300012189	Vadose Zone Soil	EAKRLQSRYDTNKIMRDARQDIFTVVDFDGTVSSQLGEPAGATDFCVFVFGRNGELLAQWHGLPAAKQLAAVVK*
Ga0137363_116997601	3300012202	Vadose Zone Soil	KDIFVATDFDGSVSSQLGEPEGATDFCVFVFGRNGGLIAQWHGVPSAEQLAAAVKWWH*
Ga0137380_103191931	3300012206	Vadose Zone Soil	IMRDARQDIFTVTDFDGTVSSQLGESAGATTDFCVFVFGRNGELLAQWHGVPSAKQLAAVVK*
Ga0137376_112164771	3300012208	Vadose Zone Soil	VNEEARRLQARYDAKKIARDARKDIFTVTDFDGTVSAQLGEPAGATDFCVFVFGRNGELRAQWHGVPTAEQLAAAIK*
Ga0137379_102655941	3300012209	Vadose Zone Soil	IKRDARKDIFIVTDFDGSVSSQLGEAEGATDFCVFVFGRDGELIAQWHGVPNAEQLAAAVK*
Ga0137378_108717381	3300012210	Vadose Zone Soil	RLQARYDGKKIARDARKDIFVATDFDGSVSSQLGEPEGATDFCVFVFGRKGELIAQWHGVPSAEQLAAAVK*
Ga0137387_103854232	3300012349	Vadose Zone Soil	DARQDIFTVTDFDGTVSSQLGESAGATTDFCVFVFGRNGELLAQWHGVPSAKQLAAVVK*
Ga0137369_100761981	3300012355	Vadose Zone Soil	VVGRKIATAFIRHRVNEEANRLQARYDGKKIARDARKDIFVATDFDGSVSSQLGEAEGATDFGVFVFGRNRELIAQWHGVPSAEQLASAVK*
Ga0137369_107258431	3300012355	Vadose Zone Soil	TIIRFARKHTVIGRRIATALIRHGVNEEARRVQARYDGKGIKRDARKDIFIVTDFDGSVSSQLGEAEGATDFCVFVFGRDGELIAQWHGVPSAEQLAAAVK*
Ga0137371_102596572	3300012356	Vadose Zone Soil	VTDFDGTVSAQLGEPAGATDFCVFVFGRNGELRAQWHGVPTAEQLAAAIK*
Ga0137371_104714142	3300012356	Vadose Zone Soil	KKIIRDARKDIFVATDFDGSVSSQLGEPEGATDFCVFVFGRKGELIAQWHGVPRAEQLAAAVK*
Ga0137360_104717271	3300012361	Vadose Zone Soil	TVTDFDGTVSSQLGESAGATDFCVFVFGRNGELLAQWHGVPAAKQLAAVVK*
Ga0137360_110190491	3300012361	Vadose Zone Soil	IIRFARRHTAIGRRIATALIRHRVNEEAKRLQARYDGKKIARDARKDIFVATDFDGSVSSQLGEPEGATDFCVFVFGRNGELIAQWHGVPSAEQLAAAVK*
Ga0137373_111017701	3300012532	Vadose Zone Soil	TVGDRVPEHCLGNPDYRMITIIRFARKHAVIGRKIATALIRHRVNEEARRLQAQYDGKGIKRDARKDIFIVTDFDGSVSSQLGEAEGATDFGVFVFGRNRELIAQWHGVPSAEQLASAVK
Ga0157304_10205741	3300012882	Soil	PDYRMITIVRFVRRHTVVGRKIATAFIRHRVNEEANRLQARYDGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK*
Ga0157306_103417431	3300012912	Soil	RRHTVVGRKIATAFIRHRVNEEANRLQARYDGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK*
Ga0137396_107882631	3300012918	Vadose Zone Soil	DIFVATDFDGSVSSQLGEPEGATDFCVFVFGRNGELIAQWHGVPSAEQLAAAVK*
Ga0137359_117672872	3300012923	Vadose Zone Soil	NEEAKRLQARYDAKKIVRDARKDIFVATDFDGSMSSQLGEPEGTTDFGVFVFGRNGELIAQWHGVPSAEQLAAALK*
Ga0137419_103927742	3300012925	Vadose Zone Soil	ARDARKDIFVATDFDGSVSSQLGEPKGATAFCVFVFGRKGELIAQWHGVPSAEQLAAAVK
Ga0137404_107940912	3300012929	Vadose Zone Soil	FVVSDFDGSVSSQLGEAEGATDFCVFVFGRNGELIAQWRGVPSAEQLAAAIK*
Ga0134077_100311023	3300012972	Grasslands Soil	RHTVLGQRIATALIRHRVNEEAKRLQARYDGKKIARDARKDIFVATDFDGSVSSQLGEPERATDFRVFVFGRNGELIAQWHGVPSAEQFAAAVK*
Ga0134077_104709752	3300012972	Grasslands Soil	DAKKIARDARTDIFTVTDFDGSGSSQLGEPAGATDFCVFVFGRNGELLAQWHGVPDAKQLAAVVK*
Ga0157378_107846621	3300013297	Miscanthus Rhizosphere	RDARKDIFVATDFDGSISSQLGEAEGAANFCVFVFGRNGELIAQWHGVPSAEQLATALK*
Ga0134078_100246483	3300014157	Grasslands Soil	ALIRHRMNEEAKRLQARYDGKKIARDARKDIFVATDFDGSVSSQLGEPERATDFRVFVFRRNGELIAQWHGVPSAEQFAAAVK*
Ga0134078_100781052	3300014157	Grasslands Soil	AKRLQSLYDTNKSMRDARQDIFTVTDFDGTVSSQLEAPAGATEFCVFVFGRDGELLVQWHDVPSAKQLADVVK*
Ga0134079_104135952	3300014166	Grasslands Soil	FARRHTVVGRKIASTFIRHRVNEEAKRLQARYDAKKIARDARKDIFVATDFDGSMSSQLGEPEGTTDFGVFVFGRNGELIAQWHGVPSAEQLAAALK*
Ga0132256_1020384612	3300015372	Arabidopsis Rhizosphere	DARKDIFVATDFDGSISSQLGEAEGAANFCVFVFGRNGELIAQWHEVPSAEQLATALK*
Ga0132257_1041013601	3300015373	Arabidopsis Rhizosphere	YDGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK*
Ga0134074_12826201	3300017657	Grasslands Soil	IIHFARRHTMVGQRIATALIRHRVNEEAKRLQARYDGKKIARDARKDIFVATDFDGSVSSQLGEPERATDFRVFVFGRNGELIAQWHGVPSAEQFAAAVK
Ga0134083_105725481	3300017659	Grasslands Soil	AVVKHRVSEEAKRLQNRYDTNKIMRDARQDIFTVVDFDGAVSSQLDEPAGATAFCVFVFGRNGELLAQWHGVPSAKQLAAVVK
Ga0184621_103626572	3300018054	Groundwater Sediment	VATDFDGSISSQLGQAKGAADFCVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0184635_100293501	3300018072	Groundwater Sediment	TVGDRVPERCLGNPDYRMITIVRFVRRHTVVGRKIATAFIRHRVNEEANRLQARYDGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0184609_101109922	3300018076	Groundwater Sediment	VNEEANRLQARYDGKKIARDARKDIFVATDFDGSISSQLGQAEGTADFCVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0184609_104980052	3300018076	Groundwater Sediment	NEEANRLQARYDGKKIARDARKDIFVATDFDGSISSQLDEAQGTADFCVFVFGRKGELIAQWHGVPSAEQLATALK
Ga0066655_111355971	3300018431	Grasslands Soil	GDRVPEHCLGDPDYRMITISRFARRHTVVGQRIANALIRHRMNEEAKRLQARYDGKKSARDARKDIFVATDFDGSVSSHLGEPEGATDFRVFVFGRNGELIAQWHGVPSAEQFAAAVK
Ga0173482_101122441	3300019361	Soil	PDYRMITIVRFVRRHTVVGRKIATAFIRHRVNEEANRLQARYDGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0173482_103649121	3300019361	Soil	DARKDIFVATDFDGSVSSQLGEAEGATDFSVFVFGRNGELIAQWHGVPSAEQLADAVK
Ga0173479_101913581	3300019362	Soil	RVNEEAKRLQARYDGKKIIRDARKDIFVATDFDGSVSPQLGEPEGATDFCVFVFGRKGELIAQWHGVPSAEQLAAAVK
Ga0193754_10016903	3300019872	Soil	IKRDARKDIFIVTDFDGSVSSQLGEAEGATDFCVFVFGRNGELIAQWRGVPSAEQLAAAV
Ga0193723_10098055	3300019879	Soil	QARYEGKKIARDARKDIFVATDFDGSISSQLGETKGAANFCVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0193735_10001041	3300020006	Soil	LCQKTYDGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0193757_10141431	3300020008	Soil	IRHGVNEEARRLQARYDGKGIKRDARKDIFIVTDFDGSVSSQLGEAEGATDFCVFVFGRNGELIAQWRGVPSAEQLAAAVK
Ga0193726_12276641	3300020021	Soil	VNEEARRLQARYDGKGIKRDARKDIFIETDFDGSVSSQLGEAEGATDFCVFVFGRNGELIAQWRGVPSAEQLAAAVK
Ga0193733_11635102	3300020022	Soil	IVRFVRSHTVVGRRIATAFIRHRVNEEANRLQARYEGKKIARDARKDIFVATDFDGSISSQLGETKGAANFCVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0210381_103229032	3300021078	Groundwater Sediment	RLQARYDGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0210382_103656732	3300021080	Groundwater Sediment	GDRVPEHCLGNPDYRMITIIRFARKHAVIGRKIATALIRHRVNEEARRLQAQYDGKGIKRDARKDIFIVTDFDGSVSSQLGEAEGATDFGVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0207688_106872542	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	DGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0207659_103596392	3300025926	Miscanthus Rhizosphere	FVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPGAEQLATALE
Ga0207679_112817341	3300025945	Corn Rhizosphere	RVNEEANRLQARYDGKKVARDARKDVFVATDFDGSISSQLGEAEGAANFRVFVFGRKGELIAQWHGVPGAEQLATALE
Ga0207683_111346231	3300026121	Miscanthus Rhizosphere	TVVGQKIATAFIRHRVNEEANRLQARYEGKKIARDARKDIFVATDFDGAISSQLGEAEGAANFCVFVFGRNGELIAQWHEVPSAEQLATALK
Ga0209153_10851742	3300026312	Soil	ALILHRMNEEAKRLQARYDGKKIARDARKDIFVATDFDGSVSSHLGEPERATDFRVFVFGRNGELIAQWHGVPSAEQFAAAVK
Ga0209155_12172732	3300026316	Soil	HTVVGRTIAITFIRHRVNEEAKRLQARYDAKKIVRDARKDIFVATDFDGSMSSQLGEPEGTTDFGVFVFGRNGELIAQWRGVPSAEQLAAAVK
Ga0209687_10151924	3300026322	Soil	FIRHRVNEEAKRLQARYDAKKILRDARKDIFVATDFDGSMSSQLGEPEGTTDFCVFVFGRNGELIAQWHGVPSGEQLAAALK
Ga0209470_12093372	3300026324	Soil	EKAHTVGDRVPEHCLGNPDYRMITIIRFARRHTVVGQRIAKALIRHRMNEEAKRLQARYDGKKIARDARKDIFVATDFDGSVSSHLGEPERATDFRVFVFGRNGELIAQWHGVPSAEQFAAAVK
Ga0209473_10976012	3300026330	Soil	TIIRFARRHTVVGRTIAITFIRHRVNEEAKRLQARYDAKKIVRDARKDIFVATDFDGSMSSQLGEPEGTTDFGVFVFGRNGELIAQWRGVPSAEQLAAAVK
Ga0209805_11022112	3300026542	Soil	VNEEAKRLQARYDAKKILRDARKDIFVATDFDGSMSSQLGEPEGTTDFCVFVFGRNGELIAQWHGVPSGEQLAAALK
Ga0209474_104425852	3300026550	Soil	RKDSFVATDFDGSVSSQLGEPERATDFRVFVFGRNGELIAQWHGVPSAEQFAAAVK
Ga0207503_10108191	3300026861	Soil	TDFDGSVSSQLGEAEGATDFSVFVFGRNGELIAQWHGVPSAEQLAAAVK
Ga0208475_10006771	3300027018	Soil	HCLGNPDYRMITVIRFARRHAVVGRRIATAFIRHRVNEEAKRLQARYDVKKIVRDARKDIFVATDFDESMSSQLGEPEGVTDFCVFVFGRKGELIAQWHGIPSAEQLATALK
Ga0207601_1149501	3300027461	Soil	NEEANRLQARYDGKKIARDARKDIFVATDFDGSISSQLGEAEGAANFRVFVFGRNGELIAQWHGVPSAEQLATALK
Ga0209998_102093142	3300027717	Arabidopsis Thaliana Rhizosphere	DGKKIIRDARKDIFVATDFDGSVSSQLGEPEGATDFCVFVFGRKGELIAQWHGVPSAEQLAAAVK
Ga0307310_101379711	3300028824	Soil	GRRIATAFIRHRVNEEANRLQARYDGKKVARDARKDVFVATDFDGSISSQLGQAQGTADFCVFVFGRNGELIAQWHGVPGAEQLATALK
Ga0307277_103146792	3300028881	Soil	KVARDARKDVFVATDFDGSISSQLGEAEGAANFRVFVFGRKGELIAQWHGVPGAEQLATALE
Ga0075386_120378762	3300030916	Soil	YDGKGIKRDARKDIFIVADFDGSVSSQFGEAEGATDFCVFVFGRNGELIAQWRGVPSAEQLAAVVK
Ga0170824_1107679295	3300031231	Forest Soil	TIIRFARKHTVIGRRIATALIRHGVNEEARRLRARYDGKGIKRDARKDIFIVTDFDGSASSQLEEAEGATDFCVLVFGRNGKLIAQWRGVPSAEQLAGAVK
Ga0170818_1065017033	3300031474	Forest Soil	LQARYDGKGIKRDARKDIFIVTDFDGSASSQLEEAEGATDFCVLVFGRNGKLIAQWRGVPSAEQLAGAVK
Ga0307476_106470051	3300031715	Hardwood Forest Soil	VVRHRVTEAAKRLQSRYDANKIMHDARQDIFTVTDFDGTVSAQLGEPAGVTDFCVFVFGRQGELLAQWHDVPGAKQLAAVLR
Ga0310813_112509021	3300031716	Soil	IRFARRHTVVGRKIATAFIRHRVNEEAKRLQTRYDVKKIVRDARKDIFVATDFDESMSSQLGEPEGVTDFCVFVFGRKGELIAQWHGIPSAEQLATALK
Ga0307469_118283812	3300031720	Hardwood Forest Soil	LIRHRVNEEAKRLQARYEGKKIARDARKDIFVATDFDGSVSSQLGEPEGATDFCVFVFGRNGELIAQWHGVPSAEQLAAAVK
Ga0307473_104873432	3300031820	Hardwood Forest Soil	DARKDIFTVIDFDGTVSSQLGEPAGATDFCVFVFGRNGESLAQWHGVPSAKQLAAVVK
Ga0307471_1000014241	3300032180	Hardwood Forest Soil	IFVATDFDGSVSSQLGEPEGATDFCVFVFGRNGELIAQWRGVPSAEQLAAAVK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056450

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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