Metagenome Family F056416

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056416
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	56 residues
Representative Sequence	MEQDTHNTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTIFRTYVLLRDEVFRKKP
Number of Associated Samples	77
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	3.62 %
% of genes near scaffold ends (potentially truncated)	18.25 %
% of genes from short scaffolds (< 2000 bps)	63.50 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (74.453 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (54.015 % of family members)
Environment Ontology (ENVO)	Unclassified (85.401 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (91.241 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1JGI24028J26656_10060333 2Water_1016674 3Water_1033024 4JGI25908J49247_100007945 5JGI25909J50240_10806211 6Ga0065861_10062952 7Ga0065861_11187031 8Ga0066223_11334922 9Ga0007797_10146253 10Ga0007797_10222416 11Ga0007795_100207593 12Ga0007794_101344122 13Ga0007800_101531151 14Ga0007796_100807743 15Ga0007796_100955352 16Ga0007796_101636621 17Ga0007796_101636631 18Ga0007792_100195604 19Ga0075464_101555763 20Ga0075464_102275882 21Ga0075472_106046632 22Ga0114973_102006981 23Ga0114973_102022081 24Ga0114973_105224302 25Ga0114962_100304693 26Ga0114962_100585942 27Ga0114962_100978773 28Ga0114962_101559574 29Ga0114962_103678512 30Ga0114962_104670562 31Ga0114962_105679702 32Ga0114962_105851072 33Ga0114980_103729531 34Ga0114963_100583534 35Ga0114963_100766894 36Ga0114963_105502152 37Ga0114963_106380262 38Ga0114968_100115435 39Ga0114968_100593063 40Ga0114977_100101345 41Ga0114977_100275611 42Ga0114977_101049114 43Ga0114977_103436961 44Ga0114978_102438172 45Ga0114966_101713173 46Ga0114975_101333382 47Ga0114975_104108382 48Ga0114975_105555951 49Ga0114979_100493784 50Ga0114959_100172475 51Ga0114959_100764272 52Ga0114959_105881411 53Ga0114976_101263732 54Ga0114976_106153261 55Ga0114951_101308615 56Ga0114958_100357604 57Ga0114958_101504572 58Ga0114964_100223703 59Ga0114964_100307483 60Ga0114964_100543936 61Ga0114964_100667953 62Ga0114964_104140382 63Ga0114960_102934531 64Ga0114960_103425902 65Ga0114967_100551573 66Ga0114967_101896773 67Ga0136235_10007569 68Ga0136644_107477641 69Ga0133913_107428153 70Ga0133913_115047271 71Ga0133913_117416003 72Ga0139557_10778032 73Ga0151515_1030710 74Ga0164294_100146901 75Ga0164294_102349072 76Ga0136641_10429352 77Ga0136641_11338761 78Ga0181338_10013273 79Ga0181344_10158483 80Ga0181344_12398822 81Ga0181356_12238301 82Ga0181358_10351142 83Ga0181358_12096482 84Ga0181357_10088151 85Ga0181563_101769292 86Ga0181359_10444703 87Ga0181359_11776233 88Ga0194049_10359483 89Ga0194059_10918522 90Ga0194061_11568851 91Ga0181337_10334521 92Ga0181354_10000856 93Ga0181354_10124693 94Ga0181351_11829432 95Ga0214917_102636832 96Ga0214917_103467742 97Ga0255752_102313232 98Ga0214921_103315393 99Ga0214923_100129297 100Ga0208376_10054344 101Ga0208376_10057814 102Ga0208376_10614292 103Ga0208249_10565122 104Ga0208864_10793022 105Ga0208248_10091566 106Ga0207954_10261144 107Ga0207954_11312172 108Ga0208613_10363864 109Ga0208916_101881673 110Ga0209188_100476611 111Ga0209188_10515162 112Ga0209188_11117401 113Ga0209297_10687612 114Ga0209297_11115253 115Ga0209087_10062635 116Ga0209087_10084285 117Ga0209085_10035664 118Ga0209085_10038515 119Ga0209085_10041676 120Ga0209085_10081927 121Ga0209085_12387762 122Ga0209597_10033541 123Ga0209189_10621964 124Ga0209596_11035913 125Ga0209596_12546062 126Ga0209088_100374854 127Ga0209829_100979744 128Ga0209354_100538963 129Ga0209048_109408112 130Ga0209191_10241704 131Ga0209191_10339032 132Ga0209401_10028033 133Ga0209401_10078081 134Ga0304729_10128193 135Ga0304729_10269121 136Ga0304729_10464984 137Ga0304728_10204412
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1JGI24028J26656_10060333 2JGI25908J49247_100007945 3Ga0007792_100195604 4Ga0114976_106153261 5Ga0114951_101308615 6Ga0181356_12238301 7Ga0214921_103315393
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1JGI24028J26656_10060333 2JGI25908J49247_100007945 3Ga0007792_100195604 4Ga0114976_106153261 5Ga0114951_101308615 6Ga0181356_12238301 7Ga0214921_103315393
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 73.21% β-sheet: 0.00% Coil/Unstructured: 26.79%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF13884	Peptidase_S74	10.95
PF13539	Peptidase_M15_4	2.92
PF00622	SPRY	0.73

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.16 %
Unclassified	root	N/A	5.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	2.19 %
Unclassified	root	N/A	5.84 %
Viruses	superkingdom	All Organisms → Viruses	91.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.19 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	74.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.52 %
Unclassified	root	N/A	5.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.19 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	74.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.52 %
Unclassified	root	N/A	5.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.52 %
Unclassified	root	N/A	5.84 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	74.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.19 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	74.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.52 %
Unclassified	root	N/A	5.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.19 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	73.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.52 %
Unclassified	root	N/A	5.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.52 %
Unclassified	root	N/A	5.84 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	73.72 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002091\|JGI24028J26656_1006033	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1771	Open in IMG/M
3300002930\|Water_101667	All Organisms → Viruses → Predicted Viral	4061	Open in IMG/M
3300002930\|Water_103302	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2657	Open in IMG/M
3300003277\|JGI25908J49247_10000794	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9779	Open in IMG/M
3300003393\|JGI25909J50240_1080621	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	652	Open in IMG/M
3300004448\|Ga0065861_1006295	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	729	Open in IMG/M
3300004448\|Ga0065861_1118703	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	808	Open in IMG/M
3300004461\|Ga0066223_1133492	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	697	Open in IMG/M
3300004771\|Ga0007797_1014625	All Organisms → Viruses → Predicted Viral	2213	Open in IMG/M
3300004771\|Ga0007797_1022241	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M

Showing 1 to 10 of 137 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	91.97%
Marine	Environmental → Aquatic → Marine	8.03%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	5.11%
Ice	Environmental → Aquatic → Freshwater → Ice	0.73%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.92%
Lake	Environmental → Aquatic → Freshwater → Lake	63.50%
Lentic	Environmental → Aquatic → Freshwater → Lentic	27.01%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.73%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.46%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.46%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.73%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	63.50%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	26.28%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.11%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.73%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.19%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.92%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	1.46%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	13.87%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.38%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.92%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.73%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.73%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	54.01%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	11.68%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.73%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.73%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.19%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.46%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300004771	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2.5M	Environmental	Open in IMG/M
3300004773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004776	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M	Environmental	Open in IMG/M

Showing 1 to 10 of 77 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24028J26656_10060333	3300002091	Lentic	MEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWATFIFTLFRTYVLLRDEIFGKKP*
Water_1016674	3300002930	Estuary Water	MEQDTNNTSFTDLMVIWVGTILGHFTLSDAVLWATLVFTLFRIYIILRDEIFKKDKL*
Water_1033024	3300002930	Estuary Water	MEQDTGQTSFTDLIVIWVGTILGHFTLSDAVLWATLIFTLFRIYIIMRDEIFGKKP*
JGI25908J49247_100007945	3300003277	Freshwater Lake	MEQNNQGTSFTDLIIIWVGTVLGYFTLSETVMWVTLVFTVFRTYVLLRDEVFGKKP*
JGI25909J50240_10806211	3300003393	Freshwater Lake	QNTNNTSFTDLIIIWVGTVLGHLTLSQTVMWVTLVFTVFRTYVLLRDEVFRKKP*
Ga0065861_10062952	3300004448	Marine	MEQDTGNASFTDLIIIWVGTILGHFTLSNAVLWATLVFTLFRIYIIMRDEIFGKKP*
Ga0065861_11187031	3300004448	Marine	MEQDTHNTSFTDLIIVWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP*
Ga0066223_11334922	3300004461	Marine	MEQDTNNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRD
Ga0007797_10146253	3300004771	Freshwater	MEQDTHNTSFTDLIIVWIGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP*
Ga0007797_10222416	3300004771	Freshwater	MEQDTNNASFTDLIIIWVGTVLGHFTLSETVMWVTLVFTVFRTYVLLRDEVFRKKP*
Ga0007795_100207593	3300004773	Freshwater	MEQDTSNSSFTDLIIIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP*
Ga0007794_101344122	3300004774	Freshwater	MEQDTHSTSFTDLIIVWIGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP*
Ga0007800_101531151	3300004776	Freshwater	MEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRIYVLLRDEVFRKKP*
Ga0007796_100807743	3300004804	Freshwater	MEQNTNNTSFTDLIVIWVGTILGHFTLSETVMWVTLIFTVFRTYVLLRDEVFRKKP*
Ga0007796_100955352	3300004804	Freshwater	MEQNTINTSFTDLIIIWVGTVLGHFTLSETVMWVTLVFTVFRTYVLLRDEVFRKKP*
Ga0007796_101636621	3300004804	Freshwater	MEQDTGQTSFTDLIVIWVGTILGHFTLSNAVLWATLVFTLFRIYIIMRDEIFGKKP*
Ga0007796_101636631	3300004804	Freshwater	MEQDTGQTSFTDLIVIWAGTILGHFTLSDAVLWATLVFTLFRIYIIMRDEIFRKKP*
Ga0007792_100195604	3300004805	Freshwater	TDLIIVWIGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP*
Ga0075464_101555763	3300006805	Aqueous	MEQDTHSPSFTDLIVVWVGTILGHFTLSDAVLWATLVFTLFRIYILLRDEIFKKDKP*
Ga0075464_102275882	3300006805	Aqueous	MEQDTNNASFTDLIVIWAGTILGHFTLSDAVLWATLVFTIFRTYVLLRDEVFRKKP*
Ga0075472_106046632	3300006917	Aqueous	MEQDTHNTSFTDLIIVWIGTILGHFTLSDAVLWATLLFTIFRTYVLLRDEVFRKKP*
Ga0114973_102006981	3300009068	Freshwater Lake	MEQDTGHTSFTDLIVIWVGTILGYFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP*
Ga0114973_102022081	3300009068	Freshwater Lake	MEQDTGKTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP*
Ga0114973_105224302	3300009068	Freshwater Lake	MEQDTSNASFTDLIIIWVGTNLGHFTLSDAVLWATLVFTIFRTYVLLRDEVFRKKP*
Ga0114962_100304693	3300009151	Freshwater Lake	MEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWSTLVFTLFRIYVIMRDEIFGKKP*
Ga0114962_100585942	3300009151	Freshwater Lake	MEQDTGNASFTDLIIIWVGTILGHFTLSDAVLWATLFFTIFRTYVLMRDEVFRKKP*
Ga0114962_100978773	3300009151	Freshwater Lake	MEQDTSNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFGKKP*
Ga0114962_101559574	3300009151	Freshwater Lake	MEQDAHNTSFTDLIIVWIGTILGHFTLSNAVLWATLLFTIFRTYVLLRDEVFRKKP*
Ga0114962_103678512	3300009151	Freshwater Lake	MEQDTNNASFTDLIIIWVGTILGHFTLSDAVLWATLVFTLFRTYVLLRDEVFRKKL*
Ga0114962_104670562	3300009151	Freshwater Lake	MEQDTHSPSFTDLIVVWVGTILGHFTLSNAVLWATLVFTLFRIYILLRDEIFKKDKP*
Ga0114962_105679702	3300009151	Freshwater Lake	MEQDTHNTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTIFRTYVLLRDEVFRKKP*
Ga0114962_105851072	3300009151	Freshwater Lake	MEQDTHNTSFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP*
Ga0114980_103729531	3300009152	Freshwater Lake	TSFTDLIVIWVGTILGHFTLSNAVLWATLVFTLFRIYIIMRDEIFGKKP*
Ga0114963_100583534	3300009154	Freshwater Lake	MEQDTSNASFTDLIVIWAGTILGHFTLSDAVLWATLFFTVFRTYVLLRDEVFRKKP*
Ga0114963_100766894	3300009154	Freshwater Lake	MEQDTHGASFTDLIIIWVGTILGHFTLSNAVLWATLFFTVFRTYVLLRDEVFGKKP*
Ga0114963_105502152	3300009154	Freshwater Lake	MEQDTHSPSFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRIYILLRDEIFKKDKP*
Ga0114963_106380262	3300009154	Freshwater Lake	MEQDAHSPSCTDLIVVWVGTILGHFTLSNAVLWATLVFTLFRIYILLRDEIFKK
Ga0114968_100115435	3300009155	Freshwater Lake	MEQDAHNTSFTDLIIVWVGTILGHFTLSDAVLWATLFFTIFRIYVLLRDEVFRKKP*
Ga0114968_100593063	3300009155	Freshwater Lake	MEQDTGNASFKDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFGKKP*
Ga0114977_100101345	3300009158	Freshwater Lake	MEQDAHNTSFTDLIIVWIGTILGHFTLSNAVLWATLLFTIFRTYVLLRDEVFRKKL*
Ga0114977_100275611	3300009158	Freshwater Lake	MEQDTGNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFGKKP*
Ga0114977_101049114	3300009158	Freshwater Lake	MEQNTHNTSFTDLIVIWVGTILGHFTLSETVMWVTLVFTVFRTYVLLRDDVFGKKP*
Ga0114977_103436961	3300009158	Freshwater Lake	MEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP*
Ga0114978_102438172	3300009159	Freshwater Lake	MEQDTGNASFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP*
Ga0114966_101713173	3300009161	Freshwater Lake	MEQDTSNASFTDLIIIWVGTILGHFTLSNAVLWATLFFTIFRTYVLLRDEVFGKKP*
Ga0114975_101333382	3300009164	Freshwater Lake	MEQDTGHTSFTDLIVIWVGTILGHFTLSNAVLWATLVFTLFRIYIIMRDEIFGKKP*
Ga0114975_104108382	3300009164	Freshwater Lake	MEQDTGNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYFLLLDEVFRKKP*
Ga0114975_105555951	3300009164	Freshwater Lake	MEQDTGHTSFTDLIIIWVGTILGHFTLSDAVLWSTLVFTLFRIYVIMRDEIFGKKP*
Ga0114979_100493784	3300009180	Freshwater Lake	MEQDTGNTSFTDLIVIWAGTILGHFTLSNAVLWATLVFTLFRIYVIMRDEIFGKKP*
Ga0114959_100172475	3300009182	Freshwater Lake	MEQDTNNTSFTDLIIVWAGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP*
Ga0114959_100764272	3300009182	Freshwater Lake	MEQDTGNASFKDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP*
Ga0114959_105881411	3300009182	Freshwater Lake	MEQDTGNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP*
Ga0114976_101263732	3300009184	Freshwater Lake	MEQDTSHTSFTDLIVIWVGTILGHFTLSDAVLWATLIFTLFRIYIIMRDEIFGKKP*
Ga0114976_106153261	3300009184	Freshwater Lake	MEQDTGHTSFTDLIVIWVGTILGHFTLSNAVLWATLVFTLFRIYI
Ga0114951_101308615	3300009502	Freshwater	MENHNDTPIDLFFIWLGTILGHFTLSDAVLWITLVYTIFRLYVLIRN
Ga0114958_100357604	3300009684	Freshwater Lake	MEQDTSNASFTDLMIIWVGTILGHVTLSDAVLWATLFFTIFRTYVLLRDEVFGKKP*
Ga0114958_101504572	3300009684	Freshwater Lake	MEQDAHNTSFTDLIIVWIGTILGHFTLSNAVLWATLLFTIFRTYVLLRDEMFRKKP*
Ga0114964_100223703	3300010157	Freshwater Lake	MEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRTYVLLRDEVFRKKL*
Ga0114964_100307483	3300010157	Freshwater Lake	MEQDTGNASFKDLIVIWVGTILGHFTLSDAVLWATLFFTVFRTYVLLRDEVFGKKP*
Ga0114964_100543936	3300010157	Freshwater Lake	MEQDTSNASFTDLIIIWVGTILGHFTLSNAVLWATLVFTIFRTYVLLRDEVFRKKP*
Ga0114964_100667953	3300010157	Freshwater Lake	QDTGHTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRTYVLLRDEVFRKKP*
Ga0114964_104140382	3300010157	Freshwater Lake	MEQDTHSTSFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLL
Ga0114960_102934531	3300010158	Freshwater Lake	MEQDAHNTSFTDLIIVWIGTILGHFTLSNAVLWATLLFTIFRTYV
Ga0114960_103425902	3300010158	Freshwater Lake	MEQDTGNASFKDLIVIWVGTILGHFTLSDAVLWATLFFTVFRTYVLLRDEVFRKKP*
Ga0114967_100551573	3300010160	Freshwater Lake	MEQNTNNTSFTDLIIIWVGTVLGYFTLSETVMWVTLVFTVFRTYVLLRDEVFRKKP*
Ga0114967_101896773	3300010160	Freshwater Lake	MEQDTGQTSFTDLIIIWAGTILGYFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP*
Ga0136235_10007569	3300010233	Freshwater	MEQDTGQTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRIYVLLRDEVFRKKP*
Ga0136644_107477641	3300010334	Freshwater Lake	MEQDTHNTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTIFRTYVL
Ga0133913_107428153	3300010885	Freshwater Lake	MEQDTHNTSFTDLIIVWVGTILGHFTLSNAVLWATLFFTIFRTYVLLRDEVFRKKP*
Ga0133913_115047271	3300010885	Freshwater Lake	MEQDTGHTSFTDLIIIWVGTILGHFTLSDAVLWSTLVFTLFRIYVIMRDEIFGKK
Ga0133913_117416003	3300010885	Freshwater Lake	MEQDAHNTSFTDLIIIWIGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKQ*
Ga0139557_10778032	3300011010	Freshwater	MEQNTNNTSFTDLIIIWVGTVLGHFTLSQTVMWVTLVFTVFRTYVLLRDEVFRKKP*
Ga0151515_1030710	3300011114	Freshwater	MEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWSTLVFTLFRIYVIIRDEIFGKKP*
Ga0164294_100146901	3300013006	Freshwater	MEQDTSNPSFTDLIIIWVGTILGHFTLSDAVLWATLVFTVFRIYILMRDEIFGKKP*
Ga0164294_102349072	3300013006	Freshwater	MEQNTNNTSFTDLIIIWVGTVLGHFTLSETVMWVTLVFTVFRTYVLLRDEVFRKKP*
Ga0136641_10429352	3300013286	Freshwater	MEQDTGHASFTDLIVIWVGTILGHFTLSETVMWVTLIFTVFRTYVLLRDEVFRKKP*
Ga0136641_11338761	3300013286	Freshwater	MEQDTNSPSFTDLIVVWVGTILGHFTLSNAVLWATLVFTLFRIYILLRDEI
Ga0181338_10013273	3300015050	Freshwater Lake	MEQNTNNTSFTDLIIIWVGTVLGHLTLSQTVMWVTLVFTVFRTYVLLRDEVFRKKP*
Ga0181344_10158483	3300017754	Freshwater Lake	MEQDTNNTSFTDLIVIWVGTTLGHFTLSDAVLWATLVFTLFRIYILLRDEIFKKDKP
Ga0181344_12398822	3300017754	Freshwater Lake	MEQDTSNSSFTDLIIIWVGTILGHFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP
Ga0181356_12238301	3300017761	Freshwater Lake	QPSRFPITQSDMEQNTNNTSFTDLIIIWVGTVLGHFTLSQTVMWVTLVFTVFRTYVLLRDEVFRKKP
Ga0181358_10351142	3300017774	Freshwater Lake	MEQDTNNTSFTDLIVIWVGTILGHFTLSDAVLWTTLVFTLFRIYIILRDEIFKKR
Ga0181358_12096482	3300017774	Freshwater Lake	MEQDTSNSSFTDLIIIWVGTILGHLTLSDAVLWATLVFTVFRIYILMRDEIFGKKP
Ga0181357_10088151	3300017777	Freshwater Lake	QSDMEQNTNNTSFTDLIIIWVGTVLGHLTLSQTVMWVTLVFTVFRTYVLLRDEVFRKKP
Ga0181563_101769292	3300018420	Salt Marsh	MEQDTGHTSFTDLIVIWAGTILGHFTLSDAVLWATLIFTLFRIYIIMRDEIFGKKP
Ga0181359_10444703	3300019784	Freshwater Lake	MEQNTNNTSFTDLIIIWVGTVLGHFTLSQTVMWVTLVFTVFRTYVLLRDEVFRKKP
Ga0181359_11776233	3300019784	Freshwater Lake	TQSDMEQNTNNTSFTDLIIIWVGTVLGHLTLSQTVMWVTLVFTVFRTYVLLRDEVFRKKP
Ga0194049_10359483	3300020157	Anoxic Zone Freshwater	MEQDAHNTSFTDLIIVWIGTILGHFTLSNAVLWATLLFTIFRTYVLLRDEVFRKKL
Ga0194059_10918522	3300021600	Anoxic Zone Freshwater	MEQDTNNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTVFRTYVLLRDEVFGKKP
Ga0194061_11568851	3300021601	Anoxic Zone Freshwater	MEQNTNNASFADLIVIWAGTILGHFTLSETVMWVTLVFTVFRTYVLLRDEVFRKKP
Ga0181337_10334521	3300022173	Freshwater Lake	QSRYLITQSDMEQNNQGTSFTDLIIIWVGTVLGYFTLSETVMWVTLVFTVFRTYVLLRDEVFGKKP
Ga0181354_10000856	3300022190	Freshwater Lake	MEQNNQGTSFTDLIIIWVGTVLGYFTLSETVMWVTLVFTVFRTYVLLRDEVFGKKP
Ga0181354_10124693	3300022190	Freshwater Lake	MEQNTNNTSFTDLIIIWVGTVLGHLTLSQTVMWVTLVFTVFRTYVLLRDEVFRKKP
Ga0181351_11829432	3300022407	Freshwater Lake	MEQNTNNTSFTDLIIIWVGTVLGHFTLSETVMWVTLVFTMFRTYVLLRDEVFRKKP
Ga0214917_102636832	3300022752	Freshwater	MEQDTGHTSFTDLIVIWAGTILGHFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP
Ga0214917_103467742	3300022752	Freshwater	MEQDTNNASFTDLIIIWVGTILGHFTLSDAVLWATLVFTIFRTYVLLRDEVFRKKP
Ga0255752_102313232	3300022929	Salt Marsh	MEQDTGHTSFTDLIVIWAGTILGHFTLSDAVLWATLIFTLFRIYIIMRDEIFRKKP
Ga0214921_103315393	3300023174	Freshwater	RQSKSLTTQSDMEQDTGHTSFTDLIVIWAGTILGHFTLSNAVLWATLVFTLFRIYIIMRDEIFGKKP
Ga0214923_100129297	3300023179	Freshwater	MEQDTHSPSFTDLIVVWVGTILGHFTLSNAVLWATLVFTLFRIYILLRDEIFKKDKP
Ga0208376_10054344	3300025455	Freshwater	MEQDTNNASFTDLIIIWVGTVLGHFTLSETVMWVTLVFTVFRTYVLLRDEVFRKKP
Ga0208376_10057814	3300025455	Freshwater	MEQDTHNTSFTDLIIVWIGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP
Ga0208376_10614292	3300025455	Freshwater	MEQNTNNTSFTDLIVIWVGTILGHFTLSETVMWVTLIFTVFRTYVLLRDEVFRKKP
Ga0208249_10565122	3300025532	Freshwater	MEQDTSNSSFTDLIIIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP
Ga0208864_10793022	3300025578	Freshwater	MEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP
Ga0208248_10091566	3300025595	Freshwater	MEQDTSNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP
Ga0207954_10261144	3300025606	Freshwater	MEQDTHSTSFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP
Ga0207954_11312172	3300025606	Freshwater	MEQDTSNSSFTDLIIIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRK
Ga0208613_10363864	3300025616	Freshwater	TDLIIVWIGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP
Ga0208916_101881673	3300025896	Aqueous	MEQDTHNTSFTDLIIVWIGTILGHFTLSDAVLWATLLFTIFRTYVLLRDEVFRKKP
Ga0209188_100476611	3300027708	Freshwater Lake	MEQDTHNTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTIFRTYVLLRDEVFRKKP
Ga0209188_10515162	3300027708	Freshwater Lake	MEQDTNNTSFTDLIIVWAGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP
Ga0209188_11117401	3300027708	Freshwater Lake	MEQDTSNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDE
Ga0209297_10687612	3300027733	Freshwater Lake	MEQNTHNTSFTDLIVIWVGTILGHFTLSETVMWVTLVFTVFRTYVLLRDEVFGKKP
Ga0209297_11115253	3300027733	Freshwater Lake	MEQDAHNTSFTDLIIVWIGTILGHFTLSNAVLWATLLFTIFRTYVLLRDEVFGKKP
Ga0209087_10062635	3300027734	Freshwater Lake	MEQNTHNTSFTDLIVIWVGTILGHFTLSETVMWVTLVFTVFRTYVLLRDDVFGKKP
Ga0209087_10084285	3300027734	Freshwater Lake	MEQDTGNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP
Ga0209085_10035664	3300027741	Freshwater Lake	MEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWSTLVFTLFRIYVIMRDEIFGKKP
Ga0209085_10038515	3300027741	Freshwater Lake	MEQDTSNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFGKKP
Ga0209085_10041676	3300027741	Freshwater Lake	MEQDTHGASFTDLIIIWVGTILGHFTLSNAVLWATLFFTVFRTYVLLRDEVFGKKP
Ga0209085_10081927	3300027741	Freshwater Lake	MEQDTGNASFTDLIIIWVGTILGHFTLSDAVLWATLFFTIFRTYVLMRDEVFRKKP
Ga0209085_12387762	3300027741	Freshwater Lake	MEQDTHNTSFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP
Ga0209597_10033541	3300027746	Freshwater Lake	ARQSKSLTTQFDMEQDTGHTSFTDLIVIWVGTILGYFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP
Ga0209189_10621964	3300027747	Freshwater Lake	QDTHNTSFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFRKKP
Ga0209596_11035913	3300027754	Freshwater Lake	MEQDAHNTSFTDLIIVWVGTILGHFTLSDAVLWATLFFTIFRIYVLLRDEVFRKKP
Ga0209596_12546062	3300027754	Freshwater Lake	MEQNTNNTSFTDLIIIWVGTVLGYFTLSETVMWVTLVFTVFRTYVLLRDEVFRKKP
Ga0209088_100374854	3300027763	Freshwater Lake	MEQDTGNTSFTDLIVIWAGTILGHFTLSNAVLWATLVFTLFRIYVIMRDEIFGKKP
Ga0209829_100979744	3300027777	Freshwater Lake	MEQDTGNASFKDLIVIWVGTILGHFTLSDAVLWATLFFTVFRTYVLLRDEVFGKKP
Ga0209354_100538963	3300027808	Freshwater Lake	QNTNNTSFTDLIIIWVGTVLGHLTLSQTVMWVTLVFTVFRTYVLLRDEVFRKKP
Ga0209048_109408112	3300027902	Freshwater Lake Sediment	MEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRTYVLLRDEVFRKKP
Ga0209191_10241704	3300027969	Freshwater Lake	MEQDTGNASFTDLIVIWVGTILGHFTLSDAVLWATLFFTIFRTYVLLRDEVFGKKP
Ga0209191_10339032	3300027969	Freshwater Lake	MEQDTGHTSFTDLIVIWVGTILGHFTLSNAVLWATLVFTLFRIYIIMRDEIFGKKP
Ga0209401_10028033	3300027971	Freshwater Lake	MEQDTGHTSFTDLIVIWVGTILGYFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP
Ga0209401_10078081	3300027971	Freshwater Lake	MEQDTGKTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRIYIIMRDEIFGKKP
Ga0304729_10128193	3300028392	Freshwater Lake	MEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWATLVFTLFRTYVLLRDEVFRKKL
Ga0304729_10269121	3300028392	Freshwater Lake	RKSLTTQSDMEQDTGHTSFTDLIVIWVGTILGHFTLSDAVLWSTLVFTLFRIYVIMRDEIFGKKP
Ga0304729_10464984	3300028392	Freshwater Lake	MEQDTSNASFTDLIIIWVGTILGHFTLSNAVLWATLVFTIFRTYVLLRDEVFRKKP
Ga0304728_10204412	3300028393	Freshwater Lake	MEQDAHSPSFTDLIVVWVGTILGHFTLSNAVLWATLVFTLFRIYILLRDEIFKKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056416

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences