Metagenome Family F056402

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056402
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	67 residues
Representative Sequence	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFEVMSSQLPSTDRAA
Number of Associated Samples	109
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.14 %
% of genes near scaffold ends (potentially truncated)	31.39 %
% of genes from short scaffolds (< 2000 bps)	80.29 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.598 % of family members)
Environment Ontology (ENVO)	Unclassified (35.036 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.985 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.05% β-sheet: 21.05% Coil/Unstructured: 57.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF05683	Fumerase_C	32.85
PF13367	PrsW-protease	16.06
PF05681	Fumerase	8.76
PF00753	Lactamase_B	2.92
PF10882	bPH_5	0.73
PF00106	adh_short	0.73
PF02604	PhdYeFM_antitox	0.73
PF13360	PQQ_2	0.73
PF07504	FTP	0.73
PF08281	Sigma70_r4_2	0.73
PF13485	Peptidase_MA_2	0.73
PF12681	Glyoxalase_2	0.73
PF02515	CoA_transf_3	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	32.85
COG1951	Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain	Energy production and conversion [C]	8.76
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.73
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.73
COG3227	Zn-dependent metalloprotease (Neutral protease B)	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.20 %
Unclassified	root	N/A	13.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.49 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	28.47 %
Unclassified	root	N/A	13.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.47 %
Unclassified	root	N/A	13.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.46 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.73 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.73 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.47 %
Unclassified	root	N/A	13.87 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.73 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.73 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.73 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.47 %
Unclassified	root	N/A	13.87 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.73 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.73 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.73 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.47 %
Unclassified	root	N/A	13.87 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.73 %
unclassified Rhizobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter	0.73 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.73 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.47 %
Unclassified	root	N/A	13.87 %
Rhizobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp.	0.73 %
Mesorhizobium sp. M2D.F.Ca.ET.145.01.1.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M2D.F.Ca.ET.145.01.1.1	0.73 %
Sphingomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	0.73 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9220087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp.	2097	Open in IMG/M
2228664021\|ICCgaii200_c0367222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0623957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0679161	Not Available	784	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14124659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105411510	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300000550\|F24TB_14882848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300000559\|F14TC_102082147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300000891\|JGI10214J12806_10624147	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300000891\|JGI10214J12806_12387859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300002124\|C687J26631_10007074	All Organisms → cellular organisms → Bacteria → Proteobacteria	4069	Open in IMG/M
3300003319\|soilL2_10053655	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300003993\|Ga0055468_10029706	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300003999\|Ga0055469_10003990	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300004114\|Ga0062593_100052275	All Organisms → cellular organisms → Bacteria	2558	Open in IMG/M
3300004114\|Ga0062593_101354152	Not Available	758	Open in IMG/M
3300004114\|Ga0062593_101604372	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300004156\|Ga0062589_100488009	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300004463\|Ga0063356_100032588	All Organisms → cellular organisms → Bacteria	5053	Open in IMG/M
3300004643\|Ga0062591_100706282	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300005294\|Ga0065705_10115430	All Organisms → cellular organisms → Bacteria	3510	Open in IMG/M
3300005334\|Ga0068869_101394779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300005343\|Ga0070687_100033439	All Organisms → cellular organisms → Bacteria	2539	Open in IMG/M
3300005347\|Ga0070668_100638310	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005353\|Ga0070669_101377940	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005354\|Ga0070675_100532359	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005354\|Ga0070675_101658787	Not Available	590	Open in IMG/M
3300005356\|Ga0070674_101252157	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005441\|Ga0070700_100870958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300005457\|Ga0070662_100967897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300005545\|Ga0070695_100366280	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300005577\|Ga0068857_100781367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300005719\|Ga0068861_100958520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300005830\|Ga0074473_11072787	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300005844\|Ga0068862_101554222	Not Available	668	Open in IMG/M
3300006049\|Ga0075417_10075903	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300006844\|Ga0075428_100059786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	4172	Open in IMG/M
3300006845\|Ga0075421_100002684	All Organisms → cellular organisms → Bacteria	21222	Open in IMG/M
3300006845\|Ga0075421_100188862	All Organisms → cellular organisms → Bacteria	2557	Open in IMG/M
3300006845\|Ga0075421_100862173	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300006845\|Ga0075421_100882653	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300006853\|Ga0075420_100008765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8976	Open in IMG/M
3300006853\|Ga0075420_100039922	All Organisms → cellular organisms → Bacteria	4192	Open in IMG/M
3300006853\|Ga0075420_100285051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1433	Open in IMG/M
3300006865\|Ga0073934_10000328	All Organisms → cellular organisms → Bacteria	140585	Open in IMG/M
3300006880\|Ga0075429_100656368	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300006894\|Ga0079215_10192006	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300006969\|Ga0075419_10322472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300006969\|Ga0075419_10636799	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300007004\|Ga0079218_10002313	All Organisms → cellular organisms → Bacteria → Proteobacteria	7446	Open in IMG/M
3300007004\|Ga0079218_10037108	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M
3300007004\|Ga0079218_11667193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300009094\|Ga0111539_10009260	All Organisms → cellular organisms → Bacteria	12445	Open in IMG/M
3300009094\|Ga0111539_11145017	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300009094\|Ga0111539_13072757	Not Available	539	Open in IMG/M
3300009100\|Ga0075418_10317639	All Organisms → cellular organisms → Bacteria → Proteobacteria	1661	Open in IMG/M
3300009176\|Ga0105242_11617847	Not Available	682	Open in IMG/M
3300009553\|Ga0105249_11705458	Not Available	702	Open in IMG/M
3300010362\|Ga0126377_12517218	Not Available	590	Open in IMG/M
3300010397\|Ga0134124_10131244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2215	Open in IMG/M
3300010399\|Ga0134127_10103059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2504	Open in IMG/M
3300010400\|Ga0134122_10254058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1486	Open in IMG/M
3300011423\|Ga0137436_1007345	All Organisms → cellular organisms → Bacteria → Proteobacteria	2714	Open in IMG/M
3300011427\|Ga0137448_1206618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300011436\|Ga0137458_1063388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300012039\|Ga0137421_1058013	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300012040\|Ga0137461_1227346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	545	Open in IMG/M
3300012231\|Ga0137465_1208868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300012907\|Ga0157283_10013654	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300012908\|Ga0157286_10244308	Not Available	629	Open in IMG/M
3300012910\|Ga0157308_10205886	Not Available	667	Open in IMG/M
3300012913\|Ga0157298_10064371	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300013306\|Ga0163162_12434709	Not Available	602	Open in IMG/M
3300013307\|Ga0157372_12083397	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300014326\|Ga0157380_10113281	All Organisms → cellular organisms → Bacteria	2284	Open in IMG/M
3300014326\|Ga0157380_10605304	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300014866\|Ga0180090_1086179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300014872\|Ga0180087_1058499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300015201\|Ga0173478_10785869	Not Available	520	Open in IMG/M
3300015371\|Ga0132258_13486084	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300015374\|Ga0132255_104114613	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018063\|Ga0184637_10102735	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300018079\|Ga0184627_10067786	All Organisms → cellular organisms → Bacteria → Acidobacteria	1863	Open in IMG/M
3300018084\|Ga0184629_10047917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1936	Open in IMG/M
3300018469\|Ga0190270_10949943	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300018469\|Ga0190270_12961279	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300018476\|Ga0190274_10377253	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300019361\|Ga0173482_10014659	All Organisms → cellular organisms → Bacteria → Proteobacteria	2105	Open in IMG/M
3300021082\|Ga0210380_10579609	Not Available	514	Open in IMG/M
3300025310\|Ga0209172_10000303	All Organisms → cellular organisms → Bacteria	140643	Open in IMG/M
3300025893\|Ga0207682_10607388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300025901\|Ga0207688_10099169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1680	Open in IMG/M
3300025903\|Ga0207680_10301690	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300025908\|Ga0207643_10086705	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300025908\|Ga0207643_10492332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300025933\|Ga0207706_10959561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300025934\|Ga0207686_10874978	Not Available	724	Open in IMG/M
3300025936\|Ga0207670_10972563	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300025936\|Ga0207670_11872278	Not Available	510	Open in IMG/M
3300025942\|Ga0207689_10506596	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300026116\|Ga0207674_10408921	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300026116\|Ga0207674_12157490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300026118\|Ga0207675_100465905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M2D.F.Ca.ET.145.01.1.1	1254	Open in IMG/M
3300026121\|Ga0207683_10107389	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300027682\|Ga0209971_1078180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300027880\|Ga0209481_10132642	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300027886\|Ga0209486_10078396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1712	Open in IMG/M
3300027907\|Ga0207428_10081102	All Organisms → cellular organisms → Bacteria	2534	Open in IMG/M
3300027907\|Ga0207428_10143308	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300027909\|Ga0209382_10487738	All Organisms → cellular organisms → Bacteria → Proteobacteria	1359	Open in IMG/M
3300028380\|Ga0268265_11067059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300028380\|Ga0268265_11237444	Not Available	745	Open in IMG/M
3300028812\|Ga0247825_10644884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300030606\|Ga0299906_10004220	All Organisms → cellular organisms → Bacteria	11789	Open in IMG/M
3300030620\|Ga0302046_10397867	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300031538\|Ga0310888_10096386	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300031538\|Ga0310888_10466768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300031547\|Ga0310887_10025838	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300031562\|Ga0310886_10549472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300031740\|Ga0307468_101144165	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300031847\|Ga0310907_10296893	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300031854\|Ga0310904_10656440	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031854\|Ga0310904_10895935	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031858\|Ga0310892_10153622	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300031908\|Ga0310900_11820525	Not Available	518	Open in IMG/M
3300031913\|Ga0310891_10237650	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300031943\|Ga0310885_10054759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1670	Open in IMG/M
3300031943\|Ga0310885_10082045	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300031943\|Ga0310885_10692958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300031944\|Ga0310884_10610131	Not Available	652	Open in IMG/M
3300032000\|Ga0310903_10589700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300032075\|Ga0310890_10103063	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300032075\|Ga0310890_11113854	Not Available	640	Open in IMG/M
3300032075\|Ga0310890_11177556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300032144\|Ga0315910_10153490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1714	Open in IMG/M
3300032157\|Ga0315912_10938613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300032174\|Ga0307470_10461926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.58%
Host-Associated	Host-Associated	39.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.18%
Plants	Host-Associated → Plants	39.42%
Aquatic	Environmental → Aquatic	12.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.87%
Sediment	Environmental → Aquatic → Sediment	8.76%
Marine	Environmental → Aquatic → Marine	1.46%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.46%
Freshwater	Environmental → Aquatic → Freshwater	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.57%
Loam	Environmental → Terrestrial → Soil → Loam	5.84%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.46%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.73%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	13.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.46%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.49%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.19%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.19%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.46%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.46%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.46%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.73%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02725350	2088090015	Soil	MSSPVATSSPSYYISKTEKGWQLKIQNEHCSVVQVFRSASDAQQSVDRMMEFFEVMSSQLPPTDRAA
ICCgaii200_03672222	2228664021	Soil	MSSPVSASSPSYHISQTEKGWLLQIQNEHCSVVQVFRSASDARLAIDRMMEFFETISAQAPTSGRAA
ICChiseqgaiiDRAFT_06239572	3300000033	Soil	MSSHVPTSSPSYHISETEKGWLLEIQNEHCSVMQVFRSASAARLAVDRMMEFFETMRTQAPGSRHAA*
ICChiseqgaiiDRAFT_06791612	3300000033	Soil	MSSPVATSSPSYYISKTEKGWQLKIQNEHCSVVQVFRSASDAQQSVDRMMEFFEVMS
ICChiseqgaiiFebDRAFT_141246592	3300000363	Soil	MSSPVSASSPSYHISQTEKGWLLQIQNEHCSVVQVFRSASDARLAIDRMMEFFETISAQAPTSGRAA*
INPhiseqgaiiFebDRAFT_1054115102	3300000364	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFDVMSSQLPSTDRAA*
F24TB_148828482	3300000550	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFXXMSSQLPPTDRAAWPAPVTPSRTATV*
F14TC_1020821471	3300000559	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMLEFFEVMSSQLPPTDRAAWPAPVTPSRTATV*
JGI10214J12806_106241471	3300000891	Soil	SSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFEVMSSRPPSTDRAA
JGI10214J12806_123878592	3300000891	Soil	MSSHVPTSSPSYRISETEKGWLLEIQNEHCSVMQVFRSASAARLAVDRMLEFFETMR
C687J26631_100070745	3300002124	Soil	MSPRVSTNPPTYDISQTEKGWLLVIQNEHCSVMQVFRSADIARDAVGRMTEFFETMRTQAPAARQAA*
soilL2_100536552	3300003319	Sugarcane Root And Bulk Soil	MSSHVVTSSPTHRISRTEKGWQVRIQNEHCSVVQVFRSESDAELALDRMMEFFEVMSSQLPPTDRAA*
Ga0055468_100297062	3300003993	Natural And Restored Wetlands	MSSHVVTSSPSYHISGTEKGWLLKVQNEHCSVVQVFRPASDAQLAVDRMMEFFEAMNSQLPSTDRAA*
Ga0055469_100039904	3300003999	Natural And Restored Wetlands	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDAQLAVDRMMEFFEAMNSQLPSTDRAA*
Ga0062593_1000522752	3300004114	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARFAVDRMLEFFEVMSSQLPSTDRAA*
Ga0062593_1013541522	3300004114	Soil	MSSPVATTSPSYHISKTEKGWQLKIQNEHCSVVQVFRSVSDAQSSVDRMMEFFEVMSSQLPPTDRAA*
Ga0062593_1016043722	3300004114	Soil	MSSHVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA*
Ga0062589_1004880092	3300004156	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLPSTDRAA*
Ga0063356_1000325883	3300004463	Arabidopsis Thaliana Rhizosphere	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFEVMSSRPPSTDRAA*
Ga0062591_1007062821	3300004643	Soil	RRMSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARFAVDRMLEFFEVMSSQLPSTDRAA*
Ga0065705_101154302	3300005294	Switchgrass Rhizosphere	MSSHVVTSSPSYHISETDKGWLLKIQNEHCSVVQVFRSASDARLAIDRMMEFFEVMSSQLPSTDRAA*
Ga0068869_1013947791	3300005334	Miscanthus Rhizosphere	MSSHVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSASDAQLAVDRMMEFFEVMSSQLPPTDRAA*
Ga0070687_1000334391	3300005343	Switchgrass Rhizosphere	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQ
Ga0070668_1006383102	3300005347	Switchgrass Rhizosphere	MSSHVVTSSPSYHISKTEKGWLLKIRNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLPSTDRAA*
Ga0070669_1013779402	3300005353	Switchgrass Rhizosphere	SHVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA*
Ga0070675_1005323592	3300005354	Miscanthus Rhizosphere	MSSHVVTSSPSYNITETEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSQLPSTDRAA*
Ga0070675_1016587872	3300005354	Miscanthus Rhizosphere	MSSRVVTSSPSYQISKTEKGWQLKIQNEHWSVVQVFRSVSDAQSSVDRMMEFFEVMSSQLPPTDRAA*
Ga0070674_1012521571	3300005356	Miscanthus Rhizosphere	ELARDPVGTCLATDRRMSSHVVTSSPSYNISETEKGWLLKIQNEHCSVMQVFRSANDARLAVDRMMEFFEVMSSQLPSTDRAA*
Ga0070700_1008709581	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSSRVVTSSPSYQISKTEKGWQLKIQNEHCSVVQVFRSASDAQLAVDRMMEFFEVMSSQLPPTDRAA*
Ga0070662_1009678972	3300005457	Corn Rhizosphere	MSSHVVTSSPSYNISETEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSQ
Ga0070695_1003662801	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSSRVVTSSPTHHISKTEKGWQLKIQNEHCSVVQVFRSASDAQLAVDRMMEFFDVMSSQLPPTDRAA*
Ga0068857_1007813672	3300005577	Corn Rhizosphere	MSSHVVTSSPSYCISETEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSQLPSTDRAA*
Ga0068861_1009585201	3300005719	Switchgrass Rhizosphere	MSSHVVTSSPSYSISETEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSS
Ga0074473_110727872	3300005830	Sediment (Intertidal)	MNTTPARSCPRYNIVQTEKGWLLVIQNEHCSVMQVFGSASSARLAVDRMLEFFDTMSPGSPDTGQAA*
Ga0068862_1015542222	3300005844	Switchgrass Rhizosphere	YHISETEKGWLLEIRNEHCSVMQVFRSASTARLAVNRMMEFFEAMSTQVPGSRHAA*
Ga0075417_100759032	3300006049	Populus Rhizosphere	MSADVCTNRPNCSIAQTEKGWLLVIQNEQCSVMQLFRSASSARLAVDRMMEFFEMMSVQVPGSRRAA*
Ga0075428_1000597861	3300006844	Populus Rhizosphere	GTCLATQLRMSSHVVTSSPSYNISETDKGWLLKIQNEHCSVVQVFRSASDARLAVDRMLEFFEVMSSQLPSTDRAA*
Ga0075421_1000026844	3300006845	Populus Rhizosphere	MSSHAPTSSPSYHISETEKGWLLEIQNEHCSVMQVFRSASAARLAVDRMMEFFATMQTQAPGKAA*
Ga0075421_1001888622	3300006845	Populus Rhizosphere	MSSHVPTSSPSYHISQTEKGWLLRIQNEHCSVVQVFRSASDARLAVDRMLEFFETMSAQAPTSGRAA*
Ga0075421_1008621732	3300006845	Populus Rhizosphere	MSSHVVTSSPSYNISETDKGWLLKIQNEHCSVVQVFRSASDARLAVDRMLEFFEVMSSQLPSTDRAA*
Ga0075421_1008826532	3300006845	Populus Rhizosphere	LTGTPLATHYGMSSQVPSSAPSCRISQTAKGWLLEIQNEHCSVMQVFRSESTARLAIDRMMEFFDTMSSQAPRKVA*
Ga0075420_1000087659	3300006853	Populus Rhizosphere	SSPSYHISQTEKGWLLRIQNEHCSVVQVFRSASDARLAVDRMLEFFETMSAQAPTSGRAA
Ga0075420_1000399223	3300006853	Populus Rhizosphere	MSSHAPTSSPSYHISETEKGWLLEIQNEHCSVMQVFRSASAARLALDRMMEFFATMQTQAPGKAA*
Ga0075420_1002850512	3300006853	Populus Rhizosphere	MSSHVPTSSPSYHISQTEKGWLLRIQNEHCSVVQVFRSASDARLAVDRMLEFLETMSAQAPTSGRAA*
Ga0073934_1000032889	3300006865	Hot Spring Sediment	MPAVASSPRYTISKTGKGWILEIQDERCSVMQVFRSASDARLAVDRMMEFFAAMSSQAPGQAA*
Ga0075429_1006563682	3300006880	Populus Rhizosphere	EGAGTCLATELRMSSHVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA*
Ga0079215_101920061	3300006894	Agricultural Soil	MSSPSYHISKTEKGWLLRIQNEHCSVVQVFRSESDARLAVDRMMEFFEVMSSQPPSGRAA
Ga0075419_103224722	3300006969	Populus Rhizosphere	MSSQVPSSAPSCRISQTAKGWLLEIQNEHCSVMQVFRSESTARLAIDRMMEFFDTMSSQAPRKVA*
Ga0075419_106367992	3300006969	Populus Rhizosphere	ATELRMSSHVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA*
Ga0079218_100023133	3300007004	Agricultural Soil	MPSHVPTSSPSYHISETGKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFETMSTQAPREAA*
Ga0079218_100371084	3300007004	Agricultural Soil	MSSHVPTSSPSYRISKTEKGWLLRIQNEHCSVVQVFRSESDARLAVDRMMEFFEVMSSQPPSGRAA*
Ga0079218_116671932	3300007004	Agricultural Soil	MSSHVITSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFHVMSSQLPSTDRAA*
Ga0111539_100092605	3300009094	Populus Rhizosphere	MSSHVPTSSPSYHISETEKGWLLQIQNEHFSVMQVFRSASAARLSVDRMMEFFETMQTQAPREAA*
Ga0111539_111450171	3300009094	Populus Rhizosphere	MSSHVATSSPSYRISQTEKGWLLKIQNEHCSVVQVFRSEDDARLAVDRMMEFFDAMSSQLPTSDRAA*
Ga0111539_130727571	3300009094	Populus Rhizosphere	MSSSVPASSPSYHISQTEKGWLLQIENEHCSVVQVFRSASDARLAIDRMMEFFETISAQAPTSGRAA*
Ga0075418_103176393	3300009100	Populus Rhizosphere	MSSLVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA*
Ga0105242_116178472	3300009176	Miscanthus Rhizosphere	VARLPTGTPLAIHHGMSSHVPASSPSYHISETEKGWLLEIRNEHCSVMQVFRSASTARLAVNRMMEFFEAMSTQVPGSRHAA*
Ga0105249_117054582	3300009553	Switchgrass Rhizosphere	MSSHVVTSSPSYHISETDKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFEVMSSQLPSTDRAA*
Ga0126377_125172182	3300010362	Tropical Forest Soil	MSPQVPAGSPSYHISETERGWLLQIQNEHCSVMQVFRSASDARLAIDRMMEFFETMSAQAPNSRRVS*
Ga0134124_101312444	3300010397	Terrestrial Soil	VTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA*
Ga0134127_101030592	3300010399	Terrestrial Soil	MSSRVVTSSPTHHISKTEKGWQLKIQNEHCSVVQVFRSASDAQLAIDRMMEFFEVMSSQLPPTDRAA*
Ga0134122_102540583	3300010400	Terrestrial Soil	MSSHVPTSSPSYHISETEKGWLLKIQNEHFSVVQVFRSASAARLAVDRMMEFFETMSTQAPREAA*
Ga0137436_10073452	3300011423	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFEVMSSQLPSTDRAA*
Ga0137448_12066182	3300011427	Soil	MTSDVSSNPPSYRISETEKGWRLEIQNEHFSVMQVFRSASSARLAVDRMTEFFETMRTQAPGSRLVA*
Ga0137458_10633882	3300011436	Soil	MSSHVPTSSPSYHISETEKGWQLEIQNDHCSVMQVFRSASAARLAVDRMMEFFETMSSQAPGSRRAA*
Ga0137421_10580132	3300012039	Soil	MSSHVPGSSPRCHISQTDKGWLLEIQNEHCSVMQVFRSASAARLAVDRMMEFFETMSTQAPRSQHAA*
Ga0137461_12273462	3300012040	Soil	MGLALMSGMNPHVSSTPPSYSISETEKGWRLEIQNEHFSVMQVFRSASSARLAVDRMTEFFETMRTQVPGARQAA*
Ga0137465_12088682	3300012231	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARHAVDRMMEFFEVMSSQLPSTDRAA*
Ga0157283_100136542	3300012907	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMLEFFEVMSSQLPSTDRAA*
Ga0157286_102443081	3300012908	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARFAVDRMLEFFEVMSSQLPPTDRAA*
Ga0157308_102058861	3300012910	Soil	MSSPVATTSPSYHISKTEKGWQLKIQNEHCSVVQVFRSVSDAQSAVDRMMEFFEVMSSQLPSTDRAA*
Ga0157298_100643711	3300012913	Soil	RMSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLPSTDRAA*
Ga0163162_124347091	3300013306	Switchgrass Rhizosphere	MSSHVVTSSPSYSISETEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSQLPSTDRAA*
Ga0157372_120833971	3300013307	Corn Rhizosphere	SSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA
Ga0157380_101132812	3300014326	Switchgrass Rhizosphere	MSSHVVTSSPSYHISKTEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLPSTDRAA*
Ga0157380_106053042	3300014326	Switchgrass Rhizosphere	DRRMSSHVVTSSPSYNITETEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSQLPSTDRAA*
Ga0180090_10861792	3300014866	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFEVMSSQLPSTDRAAQPAPVTPSRTA
Ga0180087_10584992	3300014872	Soil	MSSHVPVSSPSYHISQTDKGWLLEIQNEHCSVMQVFRSASAARLAVDRMMEFFETMSAQAPRSQHAA*
Ga0173478_107858691	3300015201	Soil	MSSHVVTSSPSYHISETEKGWLLKILNEHCSVVQVFRSESDARFAVDRMLEFFEVMSSQLPSTDRAA*
Ga0132258_134860842	3300015371	Arabidopsis Rhizosphere	MSSPVPASSPSYHISQTEKGWLLQIQNEHCSVVQVFRSASDARLAIDRMMEFFETISAQAPSSGRAA*
Ga0132255_1041146131	3300015374	Arabidopsis Rhizosphere	ISQTEKGWLLQIQNEHCSVVQVFRSASDARLAIDRMMEFFETISAQAPSSGRAA*
Ga0184637_101027352	3300018063	Groundwater Sediment	MPTGTCLAPRDGMTSHVSTNPPSCNISETAKGWLLEIQDEHCSVMQVFRSATSARLAVDRMMEFFETMRTQTPGARQAA
Ga0184627_100677862	3300018079	Groundwater Sediment	MTSHVSTNPPSCNISETAKGWLLEIQDEHCSVMQVFRSASSARLAVDRMMEFFETMRTQTPGARQAA
Ga0184629_100479172	3300018084	Groundwater Sediment	MTSHVSTSPPSYNISETEKGWLLQIQNEHFSVMQVFRSASSARRAVDRMMEFFETMRTKAPGASQPA
Ga0190270_109499431	3300018469	Soil	ISQTDKGWLLEIQNEHCSVMQVFRSASAARLAVDRMMEFFEAMSTHAPRSQHAA
Ga0190270_129612791	3300018469	Soil	ISQTDKGWLLEIQNEHCSVMQVFRSASAARLAVDRMMEFFETMSTQAPRSQHAA
Ga0190274_103772531	3300018476	Soil	TCLATDRRMSSHVVTSSPSYNITETEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSQLPSTDRAA
Ga0173482_100146593	3300019361	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLPSTDRAA
Ga0210380_105796092	3300021082	Groundwater Sediment	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARHAVDRMMEFFEVMSSQLPSTDRAA
Ga0209172_1000030389	3300025310	Hot Spring Sediment	MPAVASSPRYTISKTGKGWILEIQDERCSVMQVFRSASDARLAVDRMMEFFAAMSSQAPGQAA
Ga0207682_106073882	3300025893	Miscanthus Rhizosphere	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSATDAQLAVDRMMEFFEVM
Ga0207688_100991693	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSSRVVTSSPSYQISKTEKGWQLKIQNEHCSVVQVFRSASDAQLAVDRMMEFFEVMSSQLPPTDRAA
Ga0207680_103016902	3300025903	Switchgrass Rhizosphere	HISKTEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLPSTDRAA
Ga0207643_100867052	3300025908	Miscanthus Rhizosphere	MSSHVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA
Ga0207643_104923321	3300025908	Miscanthus Rhizosphere	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARFAVDRMLEFFEVMSSQLPSTDRAA
Ga0207706_109595611	3300025933	Corn Rhizosphere	MSSHVVTSSPSYHISKTEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSHLPST
Ga0207686_108749782	3300025934	Miscanthus Rhizosphere	AIHDRMSSHVPTSSPSYHISETEKGWLLEIRNEHCSVMQVFRSASTARLAVNRMMEFFEAMSTQVPGSRHAA
Ga0207670_109725631	3300025936	Switchgrass Rhizosphere	MSSHVVTSSPSYHISKTEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLPSTDRAA
Ga0207670_118722781	3300025936	Switchgrass Rhizosphere	TGLATELRMSSHVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA
Ga0207689_105065962	3300025942	Miscanthus Rhizosphere	MSSHVVTSSPSYSISETEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSQLPSTDRAA
Ga0207674_104089212	3300026116	Corn Rhizosphere	MSSHVVTSSPSYCISETEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSQLPSTDRAA
Ga0207674_121574902	3300026116	Corn Rhizosphere	MSSHVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDR
Ga0207675_1004659052	3300026118	Switchgrass Rhizosphere	MSSHVVTSSPSYSISETEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLRSTDRAA
Ga0207683_101073893	3300026121	Miscanthus Rhizosphere	MSSRVVTSSPSYQISETETGWQLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLPSTDRAA
Ga0209971_10781801	3300027682	Arabidopsis Thaliana Rhizosphere	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFEVMSSRPPSTDRAA
Ga0209481_101326422	3300027880	Populus Rhizosphere	MSSHVPTSSPSYHISQTEKGWLLRIQNEHCSVVQVFRSASDARLAVDRMLEFFETMSAQAPTSGRAA
Ga0209486_100783963	3300027886	Agricultural Soil	MSSHVPMSSPSYHISKTEKGWLLRIQNEHCSVVQVFRSESDARLAVDRMMEFFEVMSSQPPSGRAA
Ga0207428_100811022	3300027907	Populus Rhizosphere	MSSHVPTSSPSYHISETEKGWLLQIQNEHFSVMQVFRSASAARLSVDRMMEFFETMQTQAPREAA
Ga0207428_101433083	3300027907	Populus Rhizosphere	MSSHVVTSSPSYNISETDKGWLLKIQNEHCSVVQVFRSASDARLAVDRMLEFFEVMSSQLPSTDRAA
Ga0209382_104877381	3300027909	Populus Rhizosphere	GTPLATRNGMSSHAPTSSPSYHISETEKGWLLEIQNEHCSVMQVFRSASAARLAVDRMMEFFATMQTQAPGKAA
Ga0268265_110670592	3300028380	Switchgrass Rhizosphere	MSSHVVTSSPNYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMLEFFEVMSSQLPSTDRAA
Ga0268265_112374442	3300028380	Switchgrass Rhizosphere	SHVPTSSPSYHISETEKGWLLEIRNEHCSVMQVFRSASTARLAVNRMMEFFEAMSTQVPGSRHAA
Ga0247825_106448842	3300028812	Soil	VDWIPIGTSLAAHHTMSCPVPTSSPSFQILETEKGWLLEIQNEHCSVVQVFRSASAARLAVDRMMEFFETMRTQAPGSRQVA
Ga0299906_1000422011	3300030606	Soil	MVPQAQVAPPVQVTPLAQVSTPRYDIAQTEKGWRLTIENEHCSVVQVFSTSTAAQHAVGRMLEFFESMSAQAPSPRQVA
Ga0302046_103978672	3300030620	Soil	MIPHAHVSSPRYDIAQTEKGWSLTIQNEHCSVVQVFHTASAAQLAVDRMLEFFESMSAQAPGRQVA
Ga0310888_100963863	3300031538	Soil	REGAGTCLATELRMSSHVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA
Ga0310888_104667682	3300031538	Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFHVMSSQLPSTDRAA
Ga0310887_100258382	3300031547	Soil	MSSHVVTSSPSYHISETDKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFHVMSSQLPSTDRAA
Ga0310886_105494722	3300031562	Soil	MSSHVPTSSPSYRISETEKGWLLEIQNEHCSVMQMFRSASAARLAVDRMLEFFETMRTQAPGSRHAA
Ga0307468_1011441651	3300031740	Hardwood Forest Soil	MSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMMEFFEVMSSQLPSTDRAA
Ga0310907_102968931	3300031847	Soil	MSSHVVTSSPSYHISETDKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLPSTDRAA
Ga0310904_106564402	3300031854	Soil	RMSSHVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSESDARLAVDRMLEFFEVMSSQLPSTDRAA
Ga0310904_108959352	3300031854	Soil	LATELRMSSHVVTSSPSHQISKTEKGWQLRIQNEHCSVVQVFRSESDAQLAVERMMEFFDVMSSQLPPTDRAA
Ga0310892_101536222	3300031858	Soil	MSSHVPTSSPSYRISETEKGWLLEIQNEHCSVMQVFRSASAARLAVDRMMEFFETMRTQAPGSRHAA
Ga0310900_118205251	3300031908	Soil	FTGLHSIRRVRGLPLQGGMSSPVPASSPSYHISQTEKGWLLQIENEHCSVVQVFRSASDARLAVDRMMEFFETISAQAPTSGRAA
Ga0310891_102376501	3300031913	Soil	TCLATQLRMSSHVVTSSPSYHISETDKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFEVMSSQLPSTDRAA
Ga0310885_100547591	3300031943	Soil	MSSRVVTSSPSYQISKTEKGWQLKIQNEHCSVVQVFRSATDAQLAVDRMMEFFEVMSSQLPPTDRAA
Ga0310885_100820453	3300031943	Soil	HVVTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFHVMSSQLPSTDRAA
Ga0310885_106929581	3300031943	Soil	MSSHVPTSSPSYRISETEKGWLLEIQNEHCSVMQVFRSASDARLAVDRMMEFFETMRTQGPGS
Ga0310884_106101312	3300031944	Soil	MSSHVPSSSPSYRISETEKGWLLEIQNEHCSVMQVFRSASAARLAVDRMLEFFETMRTQAPGSRHAA
Ga0310903_105897001	3300032000	Soil	MSSHVVTSSPSYHISETDKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSQL
Ga0310890_101030632	3300032075	Soil	MSSHVVTSSPSYHISETDKGWLLKIQNEHCSVVQVFRSASDARLAVDRMLEFFEVMSSQLPSTDRAA
Ga0310890_111138542	3300032075	Soil	QEGMSSHVPSSSPSYRISETEKGWLLEIQNEHCSVMQVFRSASAARLAVDRMLEFFETMRTQAPGSRHAA
Ga0310890_111775561	3300032075	Soil	MSSHVVTSSPSYSISETEKGWLLKIQNEHCSVMQVFRSATDARLAVDRMMEFFEVMSSQLPSTDR
Ga0315910_101534903	3300032144	Soil	KGTWLATTDRMSLHVPTSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFATMSTQAPRESRVA
Ga0315912_109386132	3300032157	Soil	MSSPSYHISETEKGWLLKIQNEHCSVVQVFRSASDARLAVGRMMEFFATMSTQAPRESRV
Ga0307470_104619261	3300032174	Hardwood Forest Soil	MSSHVVTSSPSYQISETEKGWLLKIQNEHCSVVQVFRSASDARLAVDRMMEFFDMMSSQPPSTDRAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056402

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences