Metagenome / Metatranscriptome Family F056162

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056162
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	78 residues
Representative Sequence	MALKKREPMQFAPPTPVNGGALISEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS
Number of Associated Samples	117
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.51 %
% of genes near scaffold ends (potentially truncated)	16.67 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.696 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.290 % of family members)
Environment Ontology (ENVO)	Unclassified (28.986 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.826 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.19% β-sheet: 0.00% Coil/Unstructured: 59.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01656	CbiA	34.78
PF13378	MR_MLE_C	0.72
PF03349	Toluene_X	0.72
PF00903	Glyoxalase	0.72
PF01610	DDE_Tnp_ISL3	0.72
PF03050	DDE_Tnp_IS66	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2067	Long-chain fatty acid transport protein	Lipid transport and metabolism [I]	0.72
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.72
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
All Organisms	root	All Organisms	41.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
cellular organisms	root	All Organisms → cellular organisms	41.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.77 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	11.59 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	11.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.62 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	11.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.90 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	11.59 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	2.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	11.59 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	2.90 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	11.59 %
Desulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	2.90 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Seonamhaeicola	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola	11.59 %
unclassified Desulfovibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio	2.90 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Seonamhaeicola marinus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	11.59 %
Desulfovibrio sp. TomC	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp. TomC	2.90 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2180056	Not Available	639	Open in IMG/M
3300000550\|F24TB_11110961	All Organisms → cellular organisms → Bacteria → Proteobacteria	1971	Open in IMG/M
3300000559\|F14TC_102160607	Not Available	657	Open in IMG/M
3300000787\|JGI11643J11755_11283407	Not Available	639	Open in IMG/M
3300000789\|JGI1027J11758_12913332	Not Available	512	Open in IMG/M
3300000955\|JGI1027J12803_103126673	Not Available	1160	Open in IMG/M
3300001431\|F14TB_105855520	Not Available	544	Open in IMG/M
3300003203\|JGI25406J46586_10027625	All Organisms → cellular organisms → Bacteria	2173	Open in IMG/M
3300003203\|JGI25406J46586_10123148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	762	Open in IMG/M
3300004463\|Ga0063356_105457791	Not Available	546	Open in IMG/M
3300004463\|Ga0063356_106108228	Not Available	516	Open in IMG/M
3300005167\|Ga0066672_10264121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1111	Open in IMG/M
3300005169\|Ga0066810_10035803	Not Available	910	Open in IMG/M
3300005180\|Ga0066685_10592695	Not Available	763	Open in IMG/M
3300005187\|Ga0066675_11349609	Not Available	524	Open in IMG/M
3300005332\|Ga0066388_100510789	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	1836	Open in IMG/M
3300005332\|Ga0066388_100734682	All Organisms → cellular organisms → Bacteria → Proteobacteria	1589	Open in IMG/M
3300005332\|Ga0066388_108469685	Not Available	512	Open in IMG/M
3300005445\|Ga0070708_100273375	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300005445\|Ga0070708_101061819	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005468\|Ga0070707_100252739	All Organisms → cellular organisms → Bacteria → Proteobacteria	1715	Open in IMG/M
3300005471\|Ga0070698_100521571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	1126	Open in IMG/M
3300005518\|Ga0070699_101779629	Not Available	564	Open in IMG/M
3300005544\|Ga0070686_100469695	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005559\|Ga0066700_10455777	Not Available	897	Open in IMG/M
3300005713\|Ga0066905_101493545	Not Available	615	Open in IMG/M
3300005719\|Ga0068861_101540615	Not Available	653	Open in IMG/M
3300005764\|Ga0066903_100383478	Not Available	2299	Open in IMG/M
3300005764\|Ga0066903_103939651	Not Available	797	Open in IMG/M
3300005764\|Ga0066903_105913934	Not Available	642	Open in IMG/M
3300005937\|Ga0081455_10041034	All Organisms → cellular organisms → Bacteria → Proteobacteria	4075	Open in IMG/M
3300006046\|Ga0066652_101191523	Not Available	721	Open in IMG/M
3300006058\|Ga0075432_10070870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1252	Open in IMG/M
3300006844\|Ga0075428_100632499	Not Available	1142	Open in IMG/M
3300006845\|Ga0075421_100239163	Not Available	2230	Open in IMG/M
3300006847\|Ga0075431_100952710	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300006853\|Ga0075420_100281790	All Organisms → cellular organisms → Bacteria → Proteobacteria	1443	Open in IMG/M
3300006853\|Ga0075420_100705701	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300006969\|Ga0075419_10142761	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	1562	Open in IMG/M
3300007255\|Ga0099791_10105054	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300007258\|Ga0099793_10348872	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp. TomC	723	Open in IMG/M
3300007790\|Ga0105679_10828294	Not Available	1253	Open in IMG/M
3300009012\|Ga0066710_100254113	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	2545	Open in IMG/M
3300009012\|Ga0066710_100343510	All Organisms → cellular organisms → Bacteria → Proteobacteria	2204	Open in IMG/M
3300009038\|Ga0099829_10290482	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300009090\|Ga0099827_10664725	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	900	Open in IMG/M
3300009094\|Ga0111539_10445125	Not Available	1508	Open in IMG/M
3300009100\|Ga0075418_10977356	Not Available	916	Open in IMG/M
3300009100\|Ga0075418_11644813	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	698	Open in IMG/M
3300009137\|Ga0066709_100835546	Not Available	1337	Open in IMG/M
3300009147\|Ga0114129_10747589	Not Available	1252	Open in IMG/M
3300009147\|Ga0114129_11527674	Not Available	820	Open in IMG/M
3300009156\|Ga0111538_10158349	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	2876	Open in IMG/M
3300009553\|Ga0105249_10128757	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	2414	Open in IMG/M
3300009808\|Ga0105071_1009604	Not Available	1261	Open in IMG/M
3300009813\|Ga0105057_1033616	Not Available	797	Open in IMG/M
3300009822\|Ga0105066_1052117	Not Available	860	Open in IMG/M
3300010043\|Ga0126380_10143243	Not Available	1518	Open in IMG/M
3300010043\|Ga0126380_11087207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp. TomC	681	Open in IMG/M
3300010047\|Ga0126382_10347869	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300010047\|Ga0126382_12142854	Not Available	536	Open in IMG/M
3300010047\|Ga0126382_12223888	Not Available	528	Open in IMG/M
3300010358\|Ga0126370_10091105	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	2081	Open in IMG/M
3300010360\|Ga0126372_11045313	Not Available	831	Open in IMG/M
3300010360\|Ga0126372_11221606	Not Available	777	Open in IMG/M
3300010366\|Ga0126379_11744252	Not Available	727	Open in IMG/M
3300010397\|Ga0134124_12643310	Not Available	545	Open in IMG/M
3300010398\|Ga0126383_10151359	All Organisms → cellular organisms → Bacteria → Proteobacteria	2164	Open in IMG/M
3300010398\|Ga0126383_10367975	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300010398\|Ga0126383_11856199	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	691	Open in IMG/M
3300011269\|Ga0137392_10317386	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300011270\|Ga0137391_10213908	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300012189\|Ga0137388_10228614	All Organisms → cellular organisms → Bacteria → Proteobacteria	1687	Open in IMG/M
3300012206\|Ga0137380_10841673	Not Available	790	Open in IMG/M
3300012207\|Ga0137381_11580684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300012212\|Ga0150985_121108477	Not Available	735	Open in IMG/M
3300012354\|Ga0137366_10647044	Not Available	756	Open in IMG/M
3300012356\|Ga0137371_10160064	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300012356\|Ga0137371_10933389	Not Available	659	Open in IMG/M
3300012359\|Ga0137385_10169133	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300012359\|Ga0137385_10410090	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300012361\|Ga0137360_10356452	Not Available	1225	Open in IMG/M
3300012362\|Ga0137361_10444906	Not Available	1190	Open in IMG/M
3300012363\|Ga0137390_10050600	All Organisms → cellular organisms → Bacteria	4030	Open in IMG/M
3300012685\|Ga0137397_10775155	Not Available	711	Open in IMG/M
3300012923\|Ga0137359_10664167	Not Available	910	Open in IMG/M
3300012930\|Ga0137407_11079599	Not Available	761	Open in IMG/M
3300012944\|Ga0137410_10616485	Not Available	898	Open in IMG/M
3300012948\|Ga0126375_10130857	Not Available	1548	Open in IMG/M
3300012948\|Ga0126375_10296800	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300012948\|Ga0126375_10819825	Not Available	739	Open in IMG/M
3300012971\|Ga0126369_10582392	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	1187	Open in IMG/M
3300015245\|Ga0137409_10309217	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1387	Open in IMG/M
3300015264\|Ga0137403_10100399	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	2902	Open in IMG/M
3300015356\|Ga0134073_10412368	Not Available	512	Open in IMG/M
3300015371\|Ga0132258_11453090	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300015372\|Ga0132256_100395054	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	1484	Open in IMG/M
3300015374\|Ga0132255_102775479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp. TomC	749	Open in IMG/M
3300016387\|Ga0182040_11106456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp. TomC	664	Open in IMG/M
3300016445\|Ga0182038_11282946	Not Available	654	Open in IMG/M
3300017659\|Ga0134083_10078759	Not Available	1277	Open in IMG/M
3300017997\|Ga0184610_1011333	Not Available	2247	Open in IMG/M
3300018052\|Ga0184638_1047976	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	1554	Open in IMG/M
3300018053\|Ga0184626_10053906	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	1686	Open in IMG/M
3300018063\|Ga0184637_10045439	All Organisms → cellular organisms → Bacteria → Proteobacteria	2672	Open in IMG/M
3300018078\|Ga0184612_10411998	Not Available	678	Open in IMG/M
3300018084\|Ga0184629_10334895	Not Available	797	Open in IMG/M
3300018466\|Ga0190268_12138364	Not Available	521	Open in IMG/M
3300018482\|Ga0066669_12129204	Not Available	530	Open in IMG/M
3300021081\|Ga0210379_10462076	Not Available	563	Open in IMG/M
3300021086\|Ga0179596_10373848	Not Available	717	Open in IMG/M
3300021476\|Ga0187846_10177795	Not Available	895	Open in IMG/M
3300025910\|Ga0207684_11729304	Not Available	503	Open in IMG/M
3300025922\|Ga0207646_10260636	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300025945\|Ga0207679_10996624	Not Available	768	Open in IMG/M
3300025961\|Ga0207712_10066413	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	2578	Open in IMG/M
3300026075\|Ga0207708_10595854	Not Available	936	Open in IMG/M
3300026118\|Ga0207675_101374473	Not Available	727	Open in IMG/M
3300027490\|Ga0209899_1006442	All Organisms → cellular organisms → Bacteria	2697	Open in IMG/M
3300027846\|Ga0209180_10354161	Not Available	837	Open in IMG/M
3300027882\|Ga0209590_10731797	Not Available	632	Open in IMG/M
3300027903\|Ga0209488_10068268	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Seonamhaeicola → Seonamhaeicola marinus	2633	Open in IMG/M
3300027907\|Ga0207428_10183693	Not Available	1579	Open in IMG/M
3300028536\|Ga0137415_10068776	Not Available	3405	Open in IMG/M
3300028587\|Ga0247828_10772179	Not Available	606	Open in IMG/M
3300030904\|Ga0308198_1010582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1106	Open in IMG/M
3300031093\|Ga0308197_10022177	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300031094\|Ga0308199_1022699	Not Available	1072	Open in IMG/M
3300031098\|Ga0308191_1012729	Not Available	778	Open in IMG/M
3300031114\|Ga0308187_10098331	Not Available	904	Open in IMG/M
3300031744\|Ga0306918_11575023	Not Available	501	Open in IMG/M
3300031947\|Ga0310909_11180378	Not Available	620	Open in IMG/M
3300032004\|Ga0307414_11971838	Not Available	545	Open in IMG/M
3300032180\|Ga0307471_103616614	Not Available	547	Open in IMG/M
3300032205\|Ga0307472_100661797	Not Available	933	Open in IMG/M
3300032261\|Ga0306920_101612878	Not Available	922	Open in IMG/M
3300034147\|Ga0364925_0414184	Not Available	512	Open in IMG/M
3300034668\|Ga0314793_130668	Not Available	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.99%
Host-Associated	Host-Associated	21.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.91%
Plants	Host-Associated → Plants	21.01%
Aquatic	Environmental → Aquatic	5.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.25%
Sediment	Environmental → Aquatic → Sediment	4.35%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Cave	Environmental → Terrestrial → Cave	0.72%
Floodplain	Environmental → Terrestrial → Floodplain	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.07%
Loam	Environmental → Terrestrial → Soil → Loam	13.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Sand	Environmental → Terrestrial → Soil → Sand	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.07%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.90%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.17%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.45%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.72%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031098	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_21800562	3300000033	Soil	MALKKREPMQFAPPSPVNGGGLISEPPSDPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILSSYFEVQDEEGS*
F24TB_111109612	3300000550	Soil	MAIKKREPMQFAPPTPVNGATLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGL*
F14TC_1021606071	3300000559	Soil	MALKKREPMQFAPPTPVHGAALISESPTEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILASYFAGQDEEGA*
JGI11643J11755_112834072	3300000787	Soil	MALKKREPMQFAPPSPVNGGGLISEPXXDPEPMVKLGVMIYKSLNKXLNLEAANREVKKQDLVNEILSSYFEVQDEEGS*
JGI1027J11758_129133322	3300000789	Soil	MALKKREPMQFAPPTPVNGGGLXSXPPSDPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILASYFAGQDEEGA*
JGI1027J12803_1031266734	3300000955	Soil	TPINGAMLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILACYFDTQDEEGA*
F14TB_1058555202	3300001431	Soil	MALQKREPMQFAPPTPVHGAALISESPTEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILASYFAGQDEEGA*
JGI25406J46586_100276252	3300003203	Tabebuia Heterophylla Rhizosphere	MGSKKREPMQFAPPAPINGATLEAEPLAEPEPMVKLGVMIYKSLNKRLNLEAAAREVKKQDLVNEILASYFDAQDEE*
JGI25406J46586_101231482	3300003203	Tabebuia Heterophylla Rhizosphere	MAIKKREPMQFAPPTPVNGAMLRTEPPAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGA*
Ga0063356_1054577911	3300004463	Arabidopsis Thaliana Rhizosphere	MALKKREPMQFAPPTPVHGGGLISEVPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSNYFEVQDEEGS*
Ga0063356_1061082281	3300004463	Arabidopsis Thaliana Rhizosphere	MAIKKREPMQFAPPTPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTRDEEDS*
Ga0066672_102641212	3300005167	Soil	MAIKKREPMQFAPPTPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDMQDEEGS*
Ga0066810_100358032	3300005169	Soil	MALKKREPMQFAPPTPVNGGTLISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQGEEGS*
Ga0066685_105926951	3300005180	Soil	MAIKKREPMQFAPPTPVHGAMLMSEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILMSYFAVQDEES*
Ga0066675_113496092	3300005187	Soil	MALKKREPMQFAPPTPVHGGVLISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGA*
Ga0066388_1005107893	3300005332	Tropical Forest Soil	MAIKKHEPMQFAPPIPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDMQDVEGS*
Ga0066388_1007346822	3300005332	Tropical Forest Soil	MAIKKREPMQFAPPTPINGATLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGE*
Ga0066388_1084696851	3300005332	Tropical Forest Soil	MASKKREPMQFAPPGALYGATLTSEPPVEPETMVKLGVMIYKSLNKRLNLEAARRDMKKQDLVNAILASYFAGQDEEHA*
Ga0070708_1002733752	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MALKKREPMQFAPPTPVNGGALISEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS*
Ga0070708_1010618191	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAIKKREPMQFAPPTPVHGAMLMSEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILVRYFAVQDEEGS*
Ga0070707_1002527392	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MALKKREPMQFAPPTPVNGGALISEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEQGL*
Ga0070698_1005215712	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MALRKREPMQFAPPTPMNGGALTSEPPAESEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFVLRDEEGA*
Ga0070699_1017796291	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAIKKREPMQFAPPTPVHGAMLMSEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLGNEILVRYFAVQDEEGS*
Ga0070686_1004696952	3300005544	Switchgrass Rhizosphere	MALKKREPMQFAPPVPVHGAALISEPPTEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILASYFAGQDEEGA*
Ga0066700_104557772	3300005559	Soil	MASKKREPMQFAPPIPVHEATLMSEPSAEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNAILMSYFAVQDEEES*
Ga0066905_1014935451	3300005713	Tropical Forest Soil	MAIKKREPMQFAPPIPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEIL
Ga0068861_1015406152	3300005719	Switchgrass Rhizosphere	MALKKREPMQFAPPTPVNGGALISEPPSDPEPMVKLGVMIYKSLNKRLSLEAANREVKKQDLVNEILASYFAGKDEEGS*
Ga0066903_1003834783	3300005764	Tropical Forest Soil	MGSKKREPMQFAPPTPVNGVTLGAEPPAEPESMVKLGVMIYKSLNKRLNLEAAAREVKKQDLVNEILASYFDAQNEEGT*
Ga0066903_1039396512	3300005764	Tropical Forest Soil	MAIKKREPMQFAPPTPVNGVTLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDRQDEEGSS*
Ga0066903_1059139341	3300005764	Tropical Forest Soil	MAIKKREPMQFAPPTPINGATLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGA*
Ga0081455_100410344	3300005937	Tabebuia Heterophylla Rhizosphere	MASKKREPMQFAPPIPVNGATLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGS*
Ga0066652_1011915231	3300006046	Soil	SKKREPMQFAPPIPVHEATLMSEPSAEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILMSYFAVQDEEES*
Ga0075432_100708702	3300006058	Populus Rhizosphere	MALKKREPMQFAPPTPVNGGGLVSAPPSDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGP*
Ga0075428_1006324993	3300006844	Populus Rhizosphere	MAIKKREPMQFAPPTPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFD
Ga0075421_1002391633	3300006845	Populus Rhizosphere	MAIKKREPMQFAPPTPVNGATLGTEPSAESEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDMQDVEGS*
Ga0075431_1009527102	3300006847	Populus Rhizosphere	MAIKKREPMQFAPPTPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLINEILARYFDTQDEEGL*
Ga0075420_1002817902	3300006853	Populus Rhizosphere	MALKKREPMQFAPPTPVNGGGLVSAPPSDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGS*
Ga0075420_1007057012	3300006853	Populus Rhizosphere	MAIKKREPMQFAPPTPVNGATLGTEPSAESEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEIL
Ga0075419_101427612	3300006969	Populus Rhizosphere	MALKKREPMQFAPPTPVNGGGLVSAPTSDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGP*
Ga0099791_101050542	3300007255	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS*
Ga0099793_103488721	3300007258	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGS*
Ga0105679_108282942	3300007790	Soil	MGSKKREPMQFAPPTPVNGATLGTKPPAEPEPMVKLGVMIYKSLNKRLNLEAAAREVKKQDLGNEILASYFDAQDEEGS*
Ga0066710_1002541132	3300009012	Grasslands Soil	MASKKREPMQFAPPIPVHEATLMSEPSAEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILMSYFAVQDEEES
Ga0066710_1003435102	3300009012	Grasslands Soil	MAIKKREPMQFAPPTPLNGATLGTESSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKRDLVNEILARYFDTQDEEGA
Ga0099829_102904822	3300009038	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPTDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGA*
Ga0099827_106647252	3300009090	Vadose Zone Soil	MALKKREPMQFAPPTPVNGKALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGA*
Ga0111539_104451252	3300009094	Populus Rhizosphere	MALKKREPMQFAPPTPVHGGGLISEVPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGS*
Ga0075418_109773562	3300009100	Populus Rhizosphere	FAPPTPLNGATLGTEPSAESEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDMQDVEGS*
Ga0075418_116448132	3300009100	Populus Rhizosphere	MAIKKREPMQFAPPTPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLINEILARYFDTQDEEGS*
Ga0066709_1008355462	3300009137	Grasslands Soil	MASKKREPMQFAPPIPVHEATLMSEPSAEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILMSYFAVQDEEES*
Ga0114129_107475892	3300009147	Populus Rhizosphere	MAIKKREPMQFAPPTPLNGATLGTESSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGA*
Ga0114129_115276741	3300009147	Populus Rhizosphere	SMTNCRSIVMAIKKREPMQFAPPIPVNGATLGTEPSAESEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDMQDVEGS*
Ga0111538_101583492	3300009156	Populus Rhizosphere	MAIKKREPMQFAPPTPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGL*
Ga0105249_101287572	3300009553	Switchgrass Rhizosphere	MALKKREPMQFAPPTPVHGAALISEPPTEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILASYFAGKDEEGS*
Ga0105071_10096042	3300009808	Groundwater Sand	MALKKREPMQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYYAVQDEEGS*
Ga0105057_10336162	3300009813	Groundwater Sand	MQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGS*
Ga0105066_10521172	3300009822	Groundwater Sand	MALKKREPMQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGS*
Ga0126380_101432432	3300010043	Tropical Forest Soil	MAFKKREPMQFAPPTPVNGATLGTESSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLGNEILTRYFDMQDAEDS*
Ga0126380_110872071	3300010043	Tropical Forest Soil	QFAPPTPVNGATLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGE*
Ga0126382_103478692	3300010047	Tropical Forest Soil	MASKKREPMQFAPPTPVNGATLGIEASAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGS*
Ga0126382_121428541	3300010047	Tropical Forest Soil	MAIKKREPMQFAPPTPVNGATLEAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNE
Ga0126382_122238881	3300010047	Tropical Forest Soil	MGSKKREPMQFAPSIPVNGATVGAEPPTEPEPMVKLGVMIYKSLNKRLNLEAAAREVKKQDLVNEILASYFDAQDEEGA*
Ga0126370_100911052	3300010358	Tropical Forest Soil	MAIKKREPMQFAPPTPVNGATLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFDMQDVEGS*
Ga0126372_110453131	3300010360	Tropical Forest Soil	MVSKKREPMQFAPPIPVHEATLISEPSAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARHFAGQDEEEA*
Ga0126372_112216062	3300010360	Tropical Forest Soil	MAIKKHEPMQFAPPIPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILTRYFDMQDAEDS*
Ga0126379_117442521	3300010366	Tropical Forest Soil	MAIKKREPMQFAPPTPINGATLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILAHYFDTQDEEDS*
Ga0134124_126433102	3300010397	Terrestrial Soil	IIVMALKKREPMQFAPPVPVHGAALISEPPTEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILSHYFAVQDEERS*
Ga0126383_101513592	3300010398	Tropical Forest Soil	MGSKKREPMQFAPPTPVNKITLGAEPPAEPESMVKLGVMIYKSLNKRLNLEAAAREVKKQDLVNEILASYFDAQNEEGT*
Ga0126383_103679752	3300010398	Tropical Forest Soil	MAIKKREPMQFAPPTPINGATLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNERLARYFDTHDEKGA*
Ga0126383_118561992	3300010398	Tropical Forest Soil	MAIKKHEPMQFAPPIPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGS*
Ga0137392_103173861	3300011269	Vadose Zone Soil	MALKKREPMQFAPPAPVNGGALISEPPDEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS*
Ga0137391_102139082	3300011270	Vadose Zone Soil	MALKKREPMQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS*
Ga0137388_102286142	3300012189	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFALQDEEGS*
Ga0137380_108416732	3300012206	Vadose Zone Soil	MQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS*
Ga0137381_115806842	3300012207	Vadose Zone Soil	MSLRAKLPVTWRRSMRNCRSIVMAIKKREPMQFAPPTPLNGATLGTESSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDKEGA*
Ga0150985_1211084772	3300012212	Avena Fatua Rhizosphere	MALKKREPMQFAPPTPVNGGALISEPPTDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS*
Ga0137366_106470442	3300012354	Vadose Zone Soil	ALKKREPMQFAPPTPVNGEALISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS*
Ga0137371_101600643	3300012356	Vadose Zone Soil	MASKKREPMQFAPPIPVHEATLMSEPSAEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILMSYFAVQDEES*
Ga0137371_109333892	3300012356	Vadose Zone Soil	MALKKREPMQFAPPTPLHEEALTSEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS*
Ga0137385_101691332	3300012359	Vadose Zone Soil	MALKKREPMHFAPPTPVNGAALISEPPADPEPMVKLGVMIYKSLNKRLNLESANREVKKQDLVNEILSSYFAVQNEEGS*
Ga0137385_104100902	3300012359	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPADPEPMVKLGVMIYKSLNKRLNLKPANREVKKQDLVNAILSSYFAVQDEE
Ga0137360_103564522	3300012361	Vadose Zone Soil	MALKKREPMQFAPPTPVNGEALISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGS*
Ga0137361_104449062	3300012362	Vadose Zone Soil	MALKKREPMQFAPPTPVNGEALISEPPADPEPMVKLGVMIYKSLNKRLNLEAANRELKKQDLVNEILSSYFEVQDEEGS*
Ga0137390_100506004	3300012363	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPTDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGS*
Ga0137397_107751552	3300012685	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPDEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGS*
Ga0137359_106641672	3300012923	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNDILASYFAVQDEEGA*
Ga0137407_110795992	3300012930	Vadose Zone Soil	MALKKREPMQFAPPTPVNGEALISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNDILASYFAVQDEEGS*
Ga0137410_106164853	3300012944	Vadose Zone Soil	PTPVNGGALISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGS*
Ga0126375_101308571	3300012948	Tropical Forest Soil	MVSKKREPMQFAPPIPVHEATLLSELPAAPEPMVKLGVMIYKSLNKRLNLEAANRDVKKQDLVNEILARHFAGQDEEAS*
Ga0126375_102968002	3300012948	Tropical Forest Soil	MAIKKREPMQFAPPIPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDMQ
Ga0126375_108198252	3300012948	Tropical Forest Soil	MQFAPPTPVNGATLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILAHYFDTRDEEDS*
Ga0126369_105823922	3300012971	Tropical Forest Soil	MQFAPPTPVNGATLGTEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEVS*
Ga0137409_103092171	3300015245	Vadose Zone Soil	APPTPVNGGALIAEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGS*
Ga0137403_101003993	3300015264	Vadose Zone Soil	MALKKREPMQFAPPTPVNGEALVSEPPAAPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS*
Ga0134073_104123681	3300015356	Grasslands Soil	RNIVMASKKREPMQFAPPIPVQEATLMSEPSAEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILMSYFAVQDEEES*
Ga0132258_114530902	3300015371	Arabidopsis Rhizosphere	MALKKREPMQFAPPTPVNGGGLILEPPSDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGS*
Ga0132256_1003950542	3300015372	Arabidopsis Rhizosphere	IIVMALKKREPMQFAPPVPVHGAALISEPPTEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILASYFAGQDEEGA*
Ga0132255_1027754791	3300015374	Arabidopsis Rhizosphere	MALKKREPMQFAPPSPVNGGGLISEPPSDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGS*
Ga0182040_111064562	3300016387	Soil	MQFAPPTPVNGATLGTESSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEFLTRYFDMQDAEDS
Ga0182038_112829461	3300016445	Soil	MGSKKREPMQFAPPTPINRVALGAEPPAESEPMVKLGVMIYKSLNKRLNLEAAAREVKKQNLVNEILASYFDAQDEEG
Ga0134083_100787591	3300017659	Grasslands Soil	MASKKREPMQFAPPIPVHEATLMSEPSAEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNAILMSYFAVQDEEES
Ga0184610_10113332	3300017997	Groundwater Sediment	MAFKKREPMQFAPPTPVNGAALIAEPPVEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNDILASYFAVQDEEGA
Ga0184638_10479762	3300018052	Groundwater Sediment	MALKKREPMQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVHDEEGS
Ga0184626_100539061	3300018053	Groundwater Sediment	MALKKREPMQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGS
Ga0184637_100454392	3300018063	Groundwater Sediment	MAIKKREPMQFAPPTPVNGATLGIEPSAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDGQDEEGS
Ga0184612_104119981	3300018078	Groundwater Sediment	MALKKREPMQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFVLRDEAGS
Ga0184629_103348951	3300018084	Groundwater Sediment	MALKKREPMQFAPPTPVNGAALIAEPPVEPEPMVKQGEMIYKSLNKRLNLEAANREVKKQDLVNDILASYFAVQDEEGA
Ga0190268_121383641	3300018466	Soil	MALKKREPMQFAPPTPVHGGGLISEVPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARHFAGQDEEEA
Ga0066669_121292041	3300018482	Grasslands Soil	KREPMQFAPPTPVNGGALISEPPTDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGA
Ga0210379_104620761	3300021081	Groundwater Sediment	MALKKREPMQFAPPTPVNGGTLISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGS
Ga0179596_103738481	3300021086	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGS
Ga0187846_101777952	3300021476	Biofilm	MALKKREPMQFAPPTPVNGGALISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGL
Ga0207684_117293042	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MALRKREPMQFAPPTPMNGGALTSEPPAESEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEQGL
Ga0207646_102606362	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MALKKREPMQFAPPTPVNGGALISEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEQGL
Ga0207679_109966242	3300025945	Corn Rhizosphere	MALKKREPMQFAPPVPVHGAALISEPPTEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILASYFAGQDEEGA
Ga0207712_100664132	3300025961	Switchgrass Rhizosphere	MALKKREPMQFAPPTPVHGAALISEPPTEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILASYFAGKDEEGS
Ga0207708_105958541	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MALKKREPMQFAPPVPVHGAALISEPPTEPEPMVKLGVMIYKSLNKQLNLEAANREVKKQDLVNEILASYFAGQD
Ga0207675_1013744732	3300026118	Switchgrass Rhizosphere	MALKKREPMQFAPPTPVNGGALISEPPSDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGS
Ga0209899_10064422	3300027490	Groundwater Sand	MALKKREPMQFAPPTPVNGVALIAEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS
Ga0209180_103541612	3300027846	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPTDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFAVQDEEGA
Ga0209590_107317971	3300027882	Vadose Zone Soil	MALKKREPMQFAPPTPVNGKALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEE
Ga0209488_100682683	3300027903	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGS
Ga0207428_101836932	3300027907	Populus Rhizosphere	MALKKREPMQFAPPTPVNGGGLVSAPPSDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGP
Ga0137415_100687766	3300028536	Vadose Zone Soil	MALKKREPMQFAPPTPVNGGALISEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFVLRDEAGS
Ga0247828_107721792	3300028587	Soil	MAIKKREPMQFAPPTPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEGL
Ga0308198_10105822	3300030904	Soil	MALKKREPMQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEGGS
Ga0308197_100221772	3300031093	Soil	MALKKREPMQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEEGS
Ga0308199_10226993	3300031094	Soil	MALKKREPMQFAPPTPVNGGALISEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILASYFAVQDEGGS
Ga0308191_10127292	3300031098	Soil	MALKKREPMQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEGA
Ga0308187_100983312	3300031114	Soil	MALKKREPMQFAPPTPVNGEALVSEPPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNDILASYFAVQDEEGS
Ga0306918_115750231	3300031744	Soil	MASKKREPMQFAPPTPVNGATLGTEPPAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILARYFDTQDEEDS
Ga0310909_111803782	3300031947	Soil	MASKKREPMQFAPPTPVNGATLGTEPPAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILTRYFDMQDAEDS
Ga0307414_119718382	3300032004	Rhizosphere	MGSKKREPMQFAPPTPVNGGTLGAEPPAESEPMVKLGVMIYKSLNKRLNLEAAAREVKKQDLVNAILASYFDAQNEEGA
Ga0307471_1036166142	3300032180	Hardwood Forest Soil	MALKKREPMQFAPPTPVNGGALISEPPSDPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSHYFAVQDEERS
Ga0307472_1006617972	3300032205	Hardwood Forest Soil	MALKKREPMQFAPPTPVNGGALISEPPAEPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSSYFEVQDEEES
Ga0306920_1016128782	3300032261	Soil	MAFKKREPMQFAPPTPVNGATLGTESSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILTRYFDMQDAEDS
Ga0364925_0414184_171_410	3300034147	Sediment	MALKKREPMQFAPPTPVHGGGLISEVPADPEPMVKLGVMIYKSLNKRLNLEAANREVKKQDLVNEILSNYFEVQDEEGS
Ga0314793_130668_49_288	3300034668	Soil	MAIKKREPMQFAPPTPVNGATLGAEPSAEPEAMVKLGVMIYKSLNKRLNLEAANREVKKQDLINEILARYFDTQDEEGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056162

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences