Metagenome Family F056111

Basic Information
Family ID	F056111
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	44 residues
Representative Sequence	DPAAVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIG
Number of Associated Samples	123
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.28 %
% of genes from short scaffolds (< 2000 bps)	92.03 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.493 % of family members)
Environment Ontology (ENVO)	Unclassified (23.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.522 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.40% β-sheet: 0.00% Coil/Unstructured: 18.60%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00437	T2SSE	58.70
PF12951	PATR	0.72
PF07045	DUF1330	0.72
PF01904	DUF72	0.72
PF01513	NAD_kinase	0.72
PF00365	PFK	0.72
PF13555	AAA_29	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.72
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.72
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	83.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	83.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	73.19 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	8.70 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.19 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	8.70 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.19 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	7.97 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.19 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	7.97 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.19 %
Verrucomicrobium spinosum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	4.35 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	2.17 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.19 %
Verrucomicrobium spinosum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	4.35 %
Verrucomicrobium sp. BvORR034	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. BvORR034	2.17 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.72 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1055108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	582	Open in IMG/M
3300000955\|JGI1027J12803_100042456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	568	Open in IMG/M
3300000955\|JGI1027J12803_109329931	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300000956\|JGI10216J12902_114539902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	621	Open in IMG/M
3300002568\|C688J35102_120343496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	1002	Open in IMG/M
3300002899\|JGIcombinedJ43975_10019501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	1089	Open in IMG/M
3300003203\|JGI25406J46586_10141642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	703	Open in IMG/M
3300004081\|Ga0063454_100708559	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	760	Open in IMG/M
3300004114\|Ga0062593_102216527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300004479\|Ga0062595_100627092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300005166\|Ga0066674_10156644	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300005178\|Ga0066688_10581821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300005329\|Ga0070683_100070533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3260	Open in IMG/M
3300005338\|Ga0068868_101897648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300005340\|Ga0070689_101019736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300005435\|Ga0070714_101276164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300005445\|Ga0070708_100969186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300005467\|Ga0070706_100746554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	907	Open in IMG/M
3300005546\|Ga0070696_100434511	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300005554\|Ga0066661_10006540	All Organisms → cellular organisms → Bacteria	5541	Open in IMG/M
3300005764\|Ga0066903_102080527	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300005764\|Ga0066903_105598870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300005764\|Ga0066903_106476027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300006031\|Ga0066651_10407001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	725	Open in IMG/M
3300006032\|Ga0066696_10603743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. BvORR034	712	Open in IMG/M
3300006163\|Ga0070715_10331274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. BvORR034	825	Open in IMG/M
3300006173\|Ga0070716_101092024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. BvORR034	636	Open in IMG/M
3300006173\|Ga0070716_101826794	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300006797\|Ga0066659_10608381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	887	Open in IMG/M
3300006904\|Ga0075424_102183752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	583	Open in IMG/M
3300007258\|Ga0099793_10381628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300007258\|Ga0099793_10548168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300009012\|Ga0066710_104117511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300009137\|Ga0066709_101121485	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300009137\|Ga0066709_101400139	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300009147\|Ga0114129_10184773	All Organisms → cellular organisms → Bacteria	2834	Open in IMG/M
3300009176\|Ga0105242_11736905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300009792\|Ga0126374_11249457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300010040\|Ga0126308_10051727	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300010043\|Ga0126380_10190686	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1361	Open in IMG/M
3300010043\|Ga0126380_10842017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	755	Open in IMG/M
3300010043\|Ga0126380_11664616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300010044\|Ga0126310_11022000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300010047\|Ga0126382_10690849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	854	Open in IMG/M
3300010301\|Ga0134070_10130477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	892	Open in IMG/M
3300010303\|Ga0134082_10113560	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300010320\|Ga0134109_10342813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300010322\|Ga0134084_10179853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	729	Open in IMG/M
3300010323\|Ga0134086_10130035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	908	Open in IMG/M
3300010337\|Ga0134062_10451715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300010359\|Ga0126376_13106334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300010362\|Ga0126377_11293941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300010364\|Ga0134066_10447474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300010366\|Ga0126379_10936828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	969	Open in IMG/M
3300010366\|Ga0126379_11667770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	742	Open in IMG/M
3300010376\|Ga0126381_101828473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	877	Open in IMG/M
3300010403\|Ga0134123_13455297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300011270\|Ga0137391_11414445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300012198\|Ga0137364_10090315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2137	Open in IMG/M
3300012202\|Ga0137363_11619040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300012203\|Ga0137399_10831261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	778	Open in IMG/M
3300012205\|Ga0137362_10453691	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300012208\|Ga0137376_11036125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300012349\|Ga0137387_10947840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300012361\|Ga0137360_11177148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300012532\|Ga0137373_11321370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300012582\|Ga0137358_10387914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	945	Open in IMG/M
3300012683\|Ga0137398_10755135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	678	Open in IMG/M
3300012897\|Ga0157285_10277590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300012899\|Ga0157299_10224324	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300012917\|Ga0137395_10424057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	954	Open in IMG/M
3300012927\|Ga0137416_10370102	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300012930\|Ga0137407_11066518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	766	Open in IMG/M
3300012960\|Ga0164301_10177928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1333	Open in IMG/M
3300012960\|Ga0164301_11539725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300012977\|Ga0134087_10033676	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300012985\|Ga0164308_10281702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1311	Open in IMG/M
3300012988\|Ga0164306_11240493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300012989\|Ga0164305_12200625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300014157\|Ga0134078_10039872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1583	Open in IMG/M
3300014745\|Ga0157377_10038513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2640	Open in IMG/M
3300015077\|Ga0173483_10385003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300015200\|Ga0173480_10924341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300015245\|Ga0137409_10535245	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300015264\|Ga0137403_11452228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300015356\|Ga0134073_10262576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300015371\|Ga0132258_13815713	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300015374\|Ga0132255_101377967	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300016341\|Ga0182035_10616973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300016341\|Ga0182035_11288454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	654	Open in IMG/M
3300016371\|Ga0182034_10543709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	974	Open in IMG/M
3300016371\|Ga0182034_10628365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	908	Open in IMG/M
3300016371\|Ga0182034_11215522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300016404\|Ga0182037_10834329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300016445\|Ga0182038_10688892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	889	Open in IMG/M
3300017657\|Ga0134074_1069220	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300018084\|Ga0184629_10428873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300018482\|Ga0066669_11105950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300018482\|Ga0066669_12152461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300019362\|Ga0173479_10203310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	837	Open in IMG/M
3300019868\|Ga0193720_1042536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300019883\|Ga0193725_1034111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1349	Open in IMG/M
3300019886\|Ga0193727_1006408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4737	Open in IMG/M
3300020010\|Ga0193749_1009247	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300020015\|Ga0193734_1065329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300021411\|Ga0193709_1006973	All Organisms → cellular organisms → Bacteria	2849	Open in IMG/M
3300021413\|Ga0193750_1081212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300021560\|Ga0126371_11859976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	722	Open in IMG/M
3300021560\|Ga0126371_12707626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300022534\|Ga0224452_1133627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300022898\|Ga0247745_1029296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	816	Open in IMG/M
3300024187\|Ga0247672_1094754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300025901\|Ga0207688_10526879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	741	Open in IMG/M
3300025910\|Ga0207684_11119602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300025915\|Ga0207693_10223108	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300025944\|Ga0207661_11666305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300026142\|Ga0207698_12754904	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300026322\|Ga0209687_1202782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300026323\|Ga0209472_1238657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300026329\|Ga0209375_1014721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4689	Open in IMG/M
3300026342\|Ga0209057_1011189	All Organisms → cellular organisms → Bacteria	5560	Open in IMG/M
3300026343\|Ga0209159_1038790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2455	Open in IMG/M
3300026548\|Ga0209161_10306666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	759	Open in IMG/M
3300026550\|Ga0209474_10703876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300028379\|Ga0268266_11971861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300028536\|Ga0137415_10366089	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300028768\|Ga0307280_10352891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300028771\|Ga0307320_10336776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300031057\|Ga0170834_100691870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300031474\|Ga0170818_105074751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300031716\|Ga0310813_12399046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300031847\|Ga0310907_10335158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	772	Open in IMG/M
3300031912\|Ga0306921_11153615	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	865	Open in IMG/M
3300031946\|Ga0310910_11004148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300031947\|Ga0310909_11502656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300032003\|Ga0310897_10549528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300032075\|Ga0310890_11541004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300032205\|Ga0307472_100722613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	899	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.03%
Host-Associated	Host-Associated	7.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.58%
Plants	Host-Associated → Plants	7.97%
Aquatic	Environmental → Aquatic	1.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.62%
Sediment	Environmental → Aquatic → Sediment	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.26%
Loam	Environmental → Terrestrial → Soil → Loam	12.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.17%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.45%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056111

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10551082	3300000579	Forest Soil	PAAVSFLQSTLNALKGKVITEATAMASVSNESELRRAMRGIA*
JGI1027J12803_1000424561	3300000955	Soil	LQSTLNALKAKIITEATAMASVSNESELRRAMRGIG*
JGI1027J12803_1093299311	3300000955	Soil	DPAAVSFLQSTLKALQGKMITEETALASVSNESELRRAMRGIG*
JGI10216J12902_1145399021	3300000956	Soil	SDPAAVSFLQSTLKALQAKIITEETAMASVSNESELRRAMRGIG*
C688J35102_1203434962	3300002568	Soil	DPAAVSFLQSTIKALQARIITEATAMASVSNESELRRAMRGIG*
JGIcombinedJ43975_100195011	3300002899	Soil	DPAAVSFLQSTLKALKGKMITEETALASVSNESELRRAMRGIG*
JGI25406J46586_101416421	3300003203	Tabebuia Heterophylla Rhizosphere	ISFLQSTIKALQARTITEATAVASVPNESELRRAMRGIA*
Ga0063454_1007085591	3300004081	Soil	DPAAVSFLQSTIKALQSNIITEATALASVSNESELRRAMRGIG*
Ga0062593_1022165272	3300004114	Soil	SDPAAVSFLQSTLKALQAKIITEATAMASVGNESELRRAMRGIG*
Ga0062595_1006270921	3300004479	Soil	RRELHNIDQYIARGSDPAAVSFLQSTINALRAKVITEATALASVSNESELRRAMRGIG*
Ga0066674_101566441	3300005166	Soil	IARGSDPAAVSFLQSTIKALQAKIITEATAMASVSNESELRRAMRGIG*
Ga0066688_105818212	3300005178	Soil	GSDPAAVSFLQSTLKALQANVITEATAMASVSNESELRRAMRGIG*
Ga0070683_1000705331	3300005329	Corn Rhizosphere	IDQYIARGSDPAAVSFLQSTINALRAKVITEATALASVSNESELRRAMRGIG*
Ga0068868_1018976482	3300005338	Miscanthus Rhizosphere	PAAVSFLQSTIKALQAKVITEATALASVSNEAELRRAMRGIG*
Ga0070689_1010197361	3300005340	Switchgrass Rhizosphere	RGSDPAAVSFLQSTIKALQAKVITEATALASVSNEAELRRAMRGIG*
Ga0070714_1012761642	3300005435	Agricultural Soil	YIARGSDPAAVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIG*
Ga0070708_1009691861	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	IDQYIARGSDPAAVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIA*
Ga0070706_1007465541	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	NIDQYIARGSDPAAVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIA*
Ga0070696_1004345112	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	PAAVSFLQSTLKALQAKVITEATATASVSNESELRRAMRGIA*
Ga0066661_100065401	3300005554	Soil	RGSDPAAVSFLQSTLHALKGKMITEETALASVSNESELRRAMRGIG*
Ga0066903_1020805271	3300005764	Tropical Forest Soil	IARRELQNIDQYIARGSDPAAVSFLQSTIKALQAKLITEGTALGSVSNESELRRAMRGIG
Ga0066903_1055988702	3300005764	Tropical Forest Soil	SFLQSAINALKAKVITEATAMASVSNEAELRRAMRGIG*
Ga0066903_1064760272	3300005764	Tropical Forest Soil	QSTINALKAKTITEATAMASVSNESELRRAMRGIG*
Ga0066651_104070012	3300006031	Soil	RGSDPAAVSFLQSTLNALKGKMITEETALASVSNESELRRAMRGIG*
Ga0066696_106037431	3300006032	Soil	SFLQSTLKALQAKIITEATALASVSNESELRRAMRGIA*
Ga0070715_103312742	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	SFLQSTINALKAKLITEATALASVSNEAELRRAMRGIG*
Ga0070716_1010920242	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IDQYIARGSDPAAVSFLQSTLQALKAKIITEATALASVSNESELRRAMRGLG*
Ga0070716_1018267941	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	YIARGSDPAAVSFLQSTINALKDKIITEATAMASVSNESELRRAMRGIG*
Ga0066659_106083812	3300006797	Soil	QSTLKALQAKIITEATAMASVSNESELRRAMRGIG*
Ga0075424_1021837521	3300006904	Populus Rhizosphere	DPAAVSFLQSTLKALQGKVITEATAMASVSNESELRRAMRGIV*
Ga0099793_103816282	3300007258	Vadose Zone Soil	LQSTLKALQAKIITEATAMSSVSNESELRRAMRGIG*
Ga0099793_105481682	3300007258	Vadose Zone Soil	STLNALKGKMIMEETALASVSNESELRRAMRGIG*
Ga0066710_1041175112	3300009012	Grasslands Soil	SFLQSTLKALQAKSITEATALASVSNESELRRAMRGIG
Ga0066709_1011214851	3300009137	Grasslands Soil	YDPAAVSFLQSTLKALQAKMITEATALASVSNESELRRAMRGIG*
Ga0066709_1014001391	3300009137	Grasslands Soil	QYIARGSDPAAVSFLQSTLKALQDKIITEATAMASVSNESELRRAMRGIG*
Ga0114129_101847733	3300009147	Populus Rhizosphere	NIDQYIARGSDPAAVSFLQSTLQALKAKVITEATALASVSNESELRRAMRGFG*
Ga0105242_117369051	3300009176	Miscanthus Rhizosphere	RGSDPAAVSFLQSTLQALKAKVITEETALASVSNESELRRAMRGIG*
Ga0126374_112494572	3300009792	Tropical Forest Soil	AVSFLQSTLKALQSKIVTEATAMASVSNESELRRAMRGIG*
Ga0126308_100517274	3300010040	Serpentine Soil	QSTLNALKGKMITQETALASVSNESELRRAMRGIG*
Ga0126380_101906862	3300010043	Tropical Forest Soil	AAVSFLQSTLNALKDKVITEETAMASVSNESELRRAMRGIA*
Ga0126380_108420171	3300010043	Tropical Forest Soil	VSFLQSTLKALQDKVITEDTAMASVSNESELRRAMRGIA*
Ga0126380_116646162	3300010043	Tropical Forest Soil	IARGSDPAAVSFLQSTINALKGKLITEATAMASVSNESELRRAMRGIG*
Ga0126310_110220001	3300010044	Serpentine Soil	STLNALKAKMITEETALASVSNESELRRAMRGIG*
Ga0126382_106908492	3300010047	Tropical Forest Soil	SFLQSTIKALQARIITEATAMASVSNESELRRAMRGIG*
Ga0134070_101304772	3300010301	Grasslands Soil	GSDPAAVSFLQSTIKALQAKIITEATAMASVSNEAELRRAMRGIG*
Ga0134082_101135602	3300010303	Grasslands Soil	SDPAAVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIG*
Ga0134109_103428132	3300010320	Grasslands Soil	AAVSFLQSTLKALQAKVISEATALASVSNESELRRAMRGIA*
Ga0134084_101798532	3300010322	Grasslands Soil	GSDPAAVSFLQSTLKALQAKIITEATALASVSNESELRRAMRGIA*
Ga0134086_101300352	3300010323	Grasslands Soil	AAVSFLQSTLKALQAKVITEATAMASVSNESELRRAIRGIG*
Ga0134062_104517151	3300010337	Grasslands Soil	SDPAAVSFLQSTLKALQAKVITEATALASVSNESELRRAMRGIA*
Ga0126376_131063341	3300010359	Tropical Forest Soil	VSFLQSTLNALQAKIITEATAIASVSNESELRRAMRGIA*
Ga0126377_112939411	3300010362	Tropical Forest Soil	AVSFLQSTINALKGKLITEATAMASVSNESELRRAMRGIG*
Ga0134066_104474742	3300010364	Grasslands Soil	DPAAVSFLQSMLKALQAKVITEATALASVSNESELRRAMRGIA*
Ga0126379_109368281	3300010366	Tropical Forest Soil	NIDQYIARGSDPAAVSFLQSTLKALQSKIVTEATAMASVSNESELRRAMRGIG*
Ga0126379_116677701	3300010366	Tropical Forest Soil	IARGSDPAAVSFLQSTLKALQSKIITEATAMASVSNESELRRAMRGIG*
Ga0126381_1018284732	3300010376	Tropical Forest Soil	ELQNIDQYIARGSDPAAVSFLQSTLNALKDKVITEATAMASVSNESELRRAMRGIA*
Ga0134123_134552972	3300010403	Terrestrial Soil	LQNIDQYIARGSDPAAVSFLQSTIDALKAKVITEATAMTAVSNESELRRAMRGIG*
Ga0137391_114144452	3300011270	Vadose Zone Soil	QSTLNALKGKMITEATALASVSNESELRRAMRGIG*
Ga0137364_100903151	3300012198	Vadose Zone Soil	PAAVSFLQSTLKALQAKMITEETAMASVSNESELRRAMRGIG*
Ga0137363_116190401	3300012202	Vadose Zone Soil	STLKALEAKIITEATAMSSVSNESELRRAMRGIG*
Ga0137399_108312612	3300012203	Vadose Zone Soil	AAVSFLQSTIKALQAKVITEATALASVSNEAELRRAMRGIG*
Ga0137362_104536911	3300012205	Vadose Zone Soil	PAAVSFLQSTLKALQDKTITEETAMASVSNESELRRAMRGIG*
Ga0137376_110361252	3300012208	Vadose Zone Soil	AAVSFLQSTLKALQAKSITEATALASVSNESELRRAMRGIG*
Ga0137387_109478402	3300012349	Vadose Zone Soil	DQYIARGSDPAAVSFLQSTLKALQDKIITEATAMASVSNESELRRAMRGIG*
Ga0137360_111771481	3300012361	Vadose Zone Soil	STLKALQDKVITEATALASVSNESELRRAMRGIA*
Ga0137373_113213702	3300012532	Vadose Zone Soil	SFLQSTLKALQDKIITEATAMASVSNESELRRAMRGIG*
Ga0137358_103879142	3300012582	Vadose Zone Soil	PAAVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIG*
Ga0137398_107551351	3300012683	Vadose Zone Soil	NIAQYIARGSDPAAVSFLQSTLKALQDKTITEETAMASVSNESELRRAMRGIG*
Ga0157285_102775901	3300012897	Soil	QYIARGSDPAAVSFLQSTLNALKGKVITEATAMASVSNESELRRAMRGIA*
Ga0157299_102243241	3300012899	Soil	PAAVSFLQSTINALKAKVITEATAMASVSNESELRRAMRGIG*
Ga0137395_104240572	3300012917	Vadose Zone Soil	GSDPAAVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIG*
Ga0137416_103701022	3300012927	Vadose Zone Soil	AVSFLQSTIKALQAKVITEATALASVSNEAELRRAMRGIG*
Ga0137407_110665182	3300012930	Vadose Zone Soil	NIDQYIARGSDPAAVSFLQSTLQALKDKVITEATAMASVSNESELRRAMRGIG*
Ga0164301_101779282	3300012960	Soil	VSFLQSTLKALQGKMITEETALASVSNESELRRAMRGIG*
Ga0164301_115397252	3300012960	Soil	AVSFLQSTLNALKGKMITEETALASVSNESELRRAMRGIG*
Ga0134087_100336763	3300012977	Grasslands Soil	QSTLKALQEKVITEATAMASVSNESELRRAMRGIG*
Ga0164308_102817021	3300012985	Soil	RGSDPAAVSFLQSTLKALQAKMITEETAMASVSNESELRRAMRGIG*
Ga0164306_112404931	3300012988	Soil	GSDPAAVSFLQSTLNALKDKVITEATAMASVSNESELRRAMRGIA*
Ga0164305_122006252	3300012989	Soil	VSFLQSALKALQAKVITEATALASVSNESELRRAMRGIG*
Ga0134078_100398721	3300014157	Grasslands Soil	STLKALQAKVITEETAIASVSNESELRRAMRGIT*
Ga0157377_100385134	3300014745	Miscanthus Rhizosphere	LQSTINALRAKVITEETALASVSNESELRRAMRGIG*
Ga0173483_103850031	3300015077	Soil	SFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIS*
Ga0173480_109243412	3300015200	Soil	VSFLQSTLNALKGKMITEQTALASVSNESELRRAMRGIG*
Ga0137409_105352451	3300015245	Vadose Zone Soil	YIARGSDPAAVSFLQSTIKALQAKIITEATAMASVSNESELRRAMRGIG*
Ga0137403_114522281	3300015264	Vadose Zone Soil	LQSTLQALKAKVITEATAMASVSNESELRRAMRGIG*
Ga0134073_102625762	3300015356	Grasslands Soil	DPAAVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIG*
Ga0132258_138157131	3300015371	Arabidopsis Rhizosphere	QNIDQYIARGSDPAAVSFLQSTINALKAKVITEATAMASVSNEAELRRAMRGIG*
Ga0132255_1013779672	3300015374	Arabidopsis Rhizosphere	AVSFLQSTLKALQDKMITEETALASVSNESELRRAMRGIG*
Ga0182035_106169732	3300016341	Soil	RRELQNIDQYIARGSDPAAVSFLQSTLNALKGKVITEATAMASVSNESELRRAMRGIA
Ga0182035_112884542	3300016341	Soil	LQSTINALKAKTITEATAMASVSNESELRRAMRGIG
Ga0182034_105437091	3300016371	Soil	GSDPAAVSFLQSTLKALQSKIITEATVMASVSNESELRRAMRGIG
Ga0182034_106283651	3300016371	Soil	RGSDPAAVSFLQSTLNALKGKVITEATAMASVSNESELRRAMRGIA
Ga0182034_112155221	3300016371	Soil	AVSFLQSTLKALQDKIITEATAMASVSNESELRRAMRGIG
Ga0182037_108343292	3300016404	Soil	LQSTLKALQDKIITEATAMASVSNESELRRAMRGIG
Ga0182038_106888921	3300016445	Soil	IARGSDPAAVSFLQSTLNALKGKVITEATAMASVSNESELRRAMRGIA
Ga0134074_10692202	3300017657	Grasslands Soil	DPAAVSFLQSTLKALQEKVITEATAMASVSNESELRRAMRGIG
Ga0184629_104288732	3300018084	Groundwater Sediment	SFLQSTLNALKGKMITEETALASVSNESELRRAMRGIG
Ga0066669_111059502	3300018482	Grasslands Soil	FLQSTLKALQAKVITEATAMASVSNESELRRAMRGIG
Ga0066669_121524611	3300018482	Grasslands Soil	AVSFLQSTLKALQAKIITEATALASVSNESELRRAMRGIA
Ga0173479_102033101	3300019362	Soil	ISQYIARGSDPAAVSFLQSTLKALQDKIITEATAMASVSNESELRRAIRGIG
Ga0193720_10425361	3300019868	Soil	DPAAVSFLQSTLNALKGKMITEETALASVSNESELRRAMRGIG
Ga0193725_10341112	3300019883	Soil	PAAVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIG
Ga0193727_10064081	3300019886	Soil	AAVSFLQSTLKALQGKMITEETALASVSNESELRRAMRGIG
Ga0193749_10092474	3300020010	Soil	FLQSTLNALKGKMITEETALASVSNESELRRAMRGIG
Ga0193734_10653292	3300020015	Soil	IDQYIARGSDPAAVSFLQSTLNALKGKMITEETALASVSNESELRRAMRGIG
Ga0193709_10069733	3300021411	Soil	FLQSTLKALQGKMITEETALASVSNESELRRAMRGIG
Ga0193750_10812121	3300021413	Soil	FLQSTLKALQAKMITEETAMASVSNESELRRAMRGIG
Ga0126371_118599762	3300021560	Tropical Forest Soil	AVSFLQSTLNALKTKVITEPTAMASVSNESELRRAMRGIA
Ga0126371_127076261	3300021560	Tropical Forest Soil	IDQYIARGSDPAAVSFLQSTIKALQAKIITEATAMASVSNESELRRAMRGIG
Ga0224452_11336271	3300022534	Groundwater Sediment	SDPAAVSFLQSTLNALKGKMITEETALASVSNESELRRAMRGIG
Ga0247745_10292962	3300022898	Soil	AAVSFLQSTLNALKGKMITEQTALASVTNESELRRAMRGIG
Ga0247672_10947541	3300024187	Soil	DPAAVSFLQSTINALRAKIITEEIALASVTNESELRRAMRGIG
Ga0207688_105268792	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	NIDQYIARGSDPAAVSFLQSTINALRGKVITEETALASVSNESELRRAMRGIG
Ga0207684_111196022	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	FLQSTLKALQAKVITEATALASVSNESELRRAMRGIA
Ga0207693_102231081	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RGSDPAAVSFLQSTLNALKGKMITEETALASVSNESELRRAMRGIG
Ga0207661_116663051	3300025944	Corn Rhizosphere	IDQYIARGSDPAAVSFLQSTINALRAKVITEETALASVSNESELRRAMRGIG
Ga0207698_127549042	3300026142	Corn Rhizosphere	RGSDPAAVSFLQSTINALKAKLITEATALASVSNEAELRRAMRGIG
Ga0209687_12027821	3300026322	Soil	DQYIARGSDPAAVSFLQSTIKALQAKIITEATAMASVSNESELRRAMRGIG
Ga0209472_12386572	3300026323	Soil	AAVSFLQSTLKALQAKIITEATAMSSVSNESELRRAMRGIG
Ga0209375_10147211	3300026329	Soil	GSDPAAVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIA
Ga0209057_10111895	3300026342	Soil	ELSNIDQYLARGSDPAAVSFLQSTLKALQDKVITEATALASVSNESELRRAMRGIA
Ga0209159_10387906	3300026343	Soil	AVSFLQSTLKALQAKVITEATAMASVSNESELRRAMRGIG
Ga0209161_103066662	3300026548	Soil	VSFLQSTLKALEAKIITEATAMSSVSNESELRRAIRGIG
Ga0209474_107038762	3300026550	Soil	AVSFLQSTLNALKGKMITEETALASVSNESELRRAMRGIG
Ga0268266_119718611	3300028379	Switchgrass Rhizosphere	ELQNIDQYIARGSDPAAVSFLQSTIDALKAKVITEATAMTAVSNESELRRAMRGIG
Ga0137415_103660891	3300028536	Vadose Zone Soil	AVSFLQSTIKALQAKVITEATALASVSNEAELRRAMRGIG
Ga0307280_103528911	3300028768	Soil	GSDPAAVSFLQSTLNALKGKMITEETALASVSNESELRRAMRGIG
Ga0307320_103367761	3300028771	Soil	LQSTLNALKGKMITEETALASVSNESELRRAMRGIG
Ga0170834_1006918702	3300031057	Forest Soil	GSDPAAVSFLQSTLNALKGKMITEETAVASVSNEAELRRAMRGIG
Ga0170818_1050747512	3300031474	Forest Soil	AVSFLQSTLKALQGKMITEETALASVSNESELRRAMRGIG
Ga0310813_123990462	3300031716	Soil	RGSDPAAVSFLQSTLKAVQDKTITEETAMASVSNESELRRAMRGIG
Ga0310907_103351582	3300031847	Soil	LQNIDQYIARGSDPAAVSFLQSTIDALKAKVITEATAMTAVSNESELRRAMRGIG
Ga0306921_111536152	3300031912	Soil	SFLQSTLNALKGKVITEATAMASVGNESELRRAMRGIA
Ga0310910_110041482	3300031946	Soil	QYIARGSDPAAVSFLQSTLNALKGKVITEATAMASVGNESELRRAMRGIA
Ga0310909_115026561	3300031947	Soil	QNIDQYIARGSDPAAVSFLQSTLKALKDKVITEATAMASVSNESELRRAMRGIA
Ga0310897_105495281	3300032003	Soil	IARGSDPAAVSFLQSTIDALKAKVITEATAMTAVSNESELRRAMRGIG
Ga0310890_115410041	3300032075	Soil	SDPAAVSFLQSTIKALQAKVITEATALASVSNEAELRRAMRGIG
Ga0307472_1007226131	3300032205	Hardwood Forest Soil	PAAVSFLQSTINALQAKLITEATALASVSNEAELRRAMRGIG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign