Metagenome / Metatranscriptome Family F056103

Overview

Basic Information

• Family ID: F056103
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 138
• Average Sequence Length: 43 residues
• Representative Sequence: MSWSWRDLVVLTFMVLLFGAAMMANVSDGPMHEYRGSWVTRASR
• Number of Associated Samples: 105
• Number of Associated Scaffolds: 137

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 75.74 %
• % of genes near scaffold ends (potentially truncated): 39.13 %
• % of genes from short scaffolds (< 2000 bps): 84.06 %
• Associated GOLD sequencing projects: 95
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (55.797 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.768 % of family members)
• Environment Ontology (ENVO): Unclassified (50.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (73.188 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 36.11%
  β-sheet: 0.00%
  Coil/Unstructured: 63.89%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF04311	DUF459	2.19
PF01042	Ribonuc_L-PSP	1.46
PF04226	Transgly_assoc	1.46
PF12833	HTH_18	0.73
PF03807	F420_oxidored	0.73
PF01527	HTH_Tnp_1	0.73
PF13193	AMP-binding_C	0.73
PF12844	HTH_19	0.73
PF04679	DNA_ligase_A_C	0.73
PF02735	Ku	0.73

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	2.19
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.46
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.46
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.73
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.73
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.73

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	44.20 %
Unclassified	root	N/A	55.80 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	44.20 %
Unclassified	root	N/A	55.80 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.20 %
Unclassified	root	N/A	55.80 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.30 %
Unclassified	root	N/A	55.80 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.23 %
Unclassified	root	N/A	55.80 %

Level 6

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.72 %
Unclassified	root	N/A	55.80 %

Level 7

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	26.09 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.72 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.72 %
Unclassified	root	N/A	55.80 %

Level 8

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	21.74 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.72 %
Unclassified	root	N/A	55.80 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.72 %

Level 9

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2.17 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.72 %
Unclassified	root	N/A	55.80 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.17 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.72 %

Level 10

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2.17 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.72 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	0.72 %
Bradyrhizobium sp. URHA0002	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHA0002	0.72 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.72 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.72 %
Unclassified	root	N/A	55.80 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2170459010|GIO7OMY01EFQ3X	Not Available	527
3300000364|INPhiseqgaiiFebDRAFT_101897963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1021
3300000955|JGI1027J12803_100606985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	524
3300000955|JGI1027J12803_101669717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	613
3300000955|JGI1027J12803_104477868	Not Available	526
3300000955|JGI1027J12803_104601005	Not Available	514
3300004153|Ga0063455_101093161	Not Available	588
3300004479|Ga0062595_100380003	Not Available	1000
3300005093|Ga0062594_100473179	Not Available	1047
3300005167|Ga0066672_10821307	Not Available	583

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	44.20%
Host-Associated	Host-Associated	55.80%

Class

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.80%
Terrestrial	Environmental → Terrestrial	44.20%

Category

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.33%
Roots	Host-Associated → Plants → Roots	1.45%
Soil	Environmental → Terrestrial → Soil	44.20%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.04%
Loam	Environmental → Terrestrial → Soil → Loam	10.14%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.04%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.07%

Subtype

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.90%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.17%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.07%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.62%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_01072920	2170459010	Grass Soil	LLWSWRDLDVLTFLMLLFGAAMMANVSDGPMHEYRGSWVTRASR
INPhiseqgaiiFebDRAFT_1018979631	3300000364	Soil	MRKSWLDLAVLAFLVLLFVAAIMANISDGPMHEYRGAWV
JGI1027J12803_1006069851	3300000955	Soil	MRKSWLDLAVLAFLVLLFVAAIMANISDGPMHEYRGAWVTRA
JGI1027J12803_1016697172	3300000955	Soil	MSWGWRDLVMLTFLVLLFGAAMIANVSDGPMREHRGSWV
JGI1027J12803_1044778681	3300000955	Soil	MWRNLVALTFSVFLLGAALMANVGDGPMSQYRGSWLTR
JGI1027J12803_1046010051	3300000955	Soil	MWRELIALTFLGLLLGAAMIANVSDGPMREYRGSWAQPLRQAP
Ga0063455_1010931612	3300004153	Soil	MLRRLRDLLVLMFLVLLLGAAMIANVSDGPMPEYRGSWVSRASRF*
Ga0062595_1003800031	3300004479	Soil	MRKKDRTVMCWRDRVVLIFFVLLFGAAIMANLNEGPMHEYRGAWVTRVSR*
Ga0062594_1004731791	3300005093	Soil	MSWSWRDLVALTHFVLLFGATMIANVSDGPMHEYRGSWVTRASR*
Ga0066672_108213072	3300005167	Soil	MAWNWRDLVVLIFFVLLFGAAMMAHVSDGPLAEHRGTWVTHALR*
Ga0070690_1000552193	3300005330	Switchgrass Rhizosphere	MSWSWRDLVVLTFMVVLFGAAMMANVSDGPMHEYRGSWVARASR*
Ga0070690_1000844451	3300005330	Switchgrass Rhizosphere	MSWSWRDLVALTLFVLLFGATMIANVSDGPMHEYRGSWVTRASR*
Ga0070660_1009155081	3300005339	Corn Rhizosphere	RMSWSWRDLFALTFFVQLFGAAMMANVSDGPMHEYRGSWVARASR*
Ga0070668_1005648902	3300005347	Switchgrass Rhizosphere	MWRQLVGLIFWGLLFGAALMANVTDGPMRDHRGSWVTHASIGR*
Ga0070675_1003541743	3300005354	Miscanthus Rhizosphere	MWRDLVALTFSVLLLGAAVMANLSGGPLPEHRGSWVTHASR*
Ga0070671_1008327122	3300005355	Switchgrass Rhizosphere	MSWNWRNLVVLTFLVFLFGAAMMANVSDGPFHEYRGSWARHAL*
Ga0070674_1010944971	3300005356	Miscanthus Rhizosphere	GSMSWNWRDLVVMAFFVLLFGAAMIANMVDGPMREHRGSWVTHALR*
Ga0070688_1010181212	3300005365	Switchgrass Rhizosphere	GEGRMSWSWRDLVVLTFMVVLFGAAMMANVSDGPMHEYRGSWVARASR*
Ga0070667_1005606792	3300005367	Switchgrass Rhizosphere	SWSWRDLVALTFLVLLFGTAMMANMSDGPMHEYRGSWVSRASR*
Ga0070709_108980803	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MWRELVGLSLLVVLLGAAMVANVTDGSMRDYRGSWLTHASK*
Ga0070710_108018312	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MWRDLVALTLAALLLGAAIVANVSDGPMRDFRGSWVTHASQ*
Ga0070678_1006475041	3300005456	Miscanthus Rhizosphere	MSWSWRDLVVLTFLVLLFGAAMMANVSDGPMHEYRGSWVSRASR*
Ga0070678_1006475043	3300005456	Miscanthus Rhizosphere	MSWSWRDLVVVTFLVMLLGGAMVANVSDGPMHQYRGSWVTRASR*
Ga0070662_1012066802	3300005457	Corn Rhizosphere	MSWSWRDLVVVTFLVMLLGAAMVANVSDGLMHQYRGSWVTRASR*
Ga0070662_1012419861	3300005457	Corn Rhizosphere	MWRDLVALTFSVLLLGAAVMANLSGGPLPEHRGSWVTHAS
Ga0070665_1000940843	3300005548	Switchgrass Rhizosphere	MSWSWRDLFALTFFVLLFGAAMMANVSDGPMHEYRGSWVARASR*
Ga0068856_1011331993	3300005614	Corn Rhizosphere	MWRNLVALTFSVFLLGAALMANVGDGPMSQYRGSW
Ga0070702_1000734591	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSWSWRDLVALTLFVLLFGVTMIANVSDGPMHEYRGSWVTRASR*
Ga0068864_1016329971	3300005618	Switchgrass Rhizosphere	WRDLVALTFSVLLLGAAVMANLSGGPLPEHRGSWVTHASR*
Ga0068861_1008114071	3300005719	Switchgrass Rhizosphere	MSWSWRDLVVVTFLVMLLGAAMVANVSDGPMHQYRGSWVT
Ga0070715_104666711	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSWNWRDLVELTFLVLLFGAAMIANVSDGPMREHRGSWVTHALR*
Ga0070712_1008619521	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MWRQMVGLIFWGLLFGAALMANVTDGPMRDHRGSWVTHASIGR*
Ga0097621_1011365192	3300006237	Miscanthus Rhizosphere	MSWNWRDLVVMAFFVLLFGAAMIANMVDGPMREHRGSWVTHALR*
Ga0066659_101827885	3300006797	Soil	MAWNWWDLVVLIFFVLLFGAAMMAHVSDGPLAEHRGTWVTHALR*
Ga0075429_1004197014	3300006880	Populus Rhizosphere	MSWRWRELVVLTFLVLLLGAAMIANVSDGPMSEYRGSWVTRASRF*
Ga0068865_1016657581	3300006881	Miscanthus Rhizosphere	MWRDLVALTFSVLLLGAAVMANLSGGPMPEHRGSWVTHASR*
Ga0074063_124308072	3300006953	Soil	MWRELVGLTFLVLLFGAALMANVADGPMRDHRGSWVTHASIGR*
Ga0111539_105059502	3300009094	Populus Rhizosphere	MSWSWRDLVVLTFLVMLLGAAMVANVSDGPMYEYQVRG*
Ga0111539_109125752	3300009094	Populus Rhizosphere	MSWRWRDLVVLTFLVLLLGAAMIANVSDGPMSEYRGSWVTRASRF*
Ga0111539_131954721	3300009094	Populus Rhizosphere	MSWSWRDLVVLTFMVLLFGAAMMANVSDGPMHEYRGSWVARASR*
Ga0105245_109891372	3300009098	Miscanthus Rhizosphere	MWRNLVTLTLSVFLLGAALMANVGDGPMSQYRGSWLTRASR*
Ga0105245_122385731	3300009098	Miscanthus Rhizosphere	MWRDLVALTFSVLLLGAAVMANLSGGPMPEHRGSWVTHASR
Ga0075418_105260491	3300009100	Populus Rhizosphere	ESRMSSRWRELVGLTFLVLLLGAAMIANVSDGPMSEYRGSWVTRASRF*
Ga0075418_121587711	3300009100	Populus Rhizosphere	MSWNWRDLVVLTFMVLLFGAAMMANVSDGPMHEYRGSWVARASR*
Ga0105247_100544101	3300009101	Switchgrass Rhizosphere	MSWSWRDLVALTFLVLLFGTAMMANMSDGPMHEYRGSWV
Ga0099792_112595972	3300009143	Vadose Zone Soil	MSWGWRDLVVLTFLVLVFGAAMIANVSDGPMREHRGSWVTHVLR*
Ga0105243_111636231	3300009148	Miscanthus Rhizosphere	EGSMSWNWRDLVVMAFFVLLFGAAMIANMVDGPMREHRGSWVTHALR*
Ga0111538_101338353	3300009156	Populus Rhizosphere	MSSRWRELVGLTFLVLLLGAAMIANVSDGPMSEYRGSWVTRASRF*
Ga0075423_117603621	3300009162	Populus Rhizosphere	MELVGLGVLTFMVLLFGAAMMANVSDGPMHECRGSWVARASR*
Ga0105241_113326312	3300009174	Corn Rhizosphere	VIRWRRTKRDKKGEAAMWRDLVALTFSVLLLGAAVMANLSGGPMPEHRGSWVTHASR*
Ga0105241_113976702	3300009174	Corn Rhizosphere	EGRMSWSWRDLVVLTRVVVLLGAAMMARVSHGPMHEYRGSWVARASR*
Ga0105242_113264051	3300009176	Miscanthus Rhizosphere	RQTFAYSDKCEKREGSMSWNWRDLVVMAFFVLLFGAAMIANMVDGPMREHRGSWVTHALR
Ga0105238_122952281	3300009551	Corn Rhizosphere	MSWNWRNLVVLTFLVFLFGAAMMANVSDGPFHEYRGSWARHALR*
Ga0105249_102491602	3300009553	Switchgrass Rhizosphere	MSRSWRDLVALTFFVLLFGAAMVANVSDGPLHEYRGSWVARAR*
Ga0105249_113806321	3300009553	Switchgrass Rhizosphere	WRWRDLVVLTLLVLLLGAAMIANVSDGPMSEYRGSWVTRASRF*
Ga0105239_136412531	3300010375	Corn Rhizosphere	MWRNLVALTFSVLLLGAALMANVGDGPMSQYRGSWLTRASR*
Ga0134124_105047841	3300010397	Terrestrial Soil	EGSMSWNWRNLVVLTFLVFLFGAAMMANVSDGPFHEYRGSWARHALR*
Ga0134123_111686382	3300010403	Terrestrial Soil	MWRDVVALTLAALLLGAAIIANVGDGPMREHRGSWVTHASKLSR*
Ga0105246_114325722	3300011119	Miscanthus Rhizosphere	MWRDLVALTLAALLLGAAIVANVSDGPMRDHRGSWVTHASQ*
Ga0137364_100680354	3300012198	Vadose Zone Soil	MSWGWRDLVVLTFLVLVFGAAMIANVSDGPMREHRGSWVTHGLR*
Ga0137383_105863711	3300012199	Vadose Zone Soil	MRKREGSMAWNWRDLVVLTFLALVFGAAMIANVSDGPMHEHRG
Ga0150985_1048061411	3300012212	Avena Fatua Rhizosphere	VALTLAALQLGAAIIANVGDGPMREHRGSWVTHASKLSR*
Ga0150985_1051779243	3300012212	Avena Fatua Rhizosphere	MCRWRDLVVLTILILLLGAAMIANVSDGPMSEYRGSWVTRASRF*
Ga0150985_1134964232	3300012212	Avena Fatua Rhizosphere	MSWRWRELVVLTFLILLLGAAMIVNVSDGPMSEYRGSWVTRASRF*
Ga0150984_1017144701	3300012469	Avena Fatua Rhizosphere	MSATKTKGSVMWRELVGLSLMVVLLGAAIVANVTDGPMRDYRGSWLTHASK*
Ga0150984_1120456681	3300012469	Avena Fatua Rhizosphere	MLRRLRDLLVLMFLVLLLGAAMIANVSDGPMPEYR
Ga0150984_1206700271	3300012469	Avena Fatua Rhizosphere	MWRELVGLIFWVLLFGAALMANFTDGPMREHRGSWVARASQLSR*
Ga0137397_102584762	3300012685	Vadose Zone Soil	MLSGWRALVVLTFLVLLIGAATIVNVSDGPMRQHRGSWVTYALR*
Ga0137410_116832921	3300012944	Vadose Zone Soil	MLSGWRALVVLTFLVFLFGAAMIANVSDGPMRERRGSWVTHALR*
Ga0164300_100245724	3300012951	Soil	MSWNWRDLVVLTFLVFLFGAAMLANVSDGPLHEHRGSWVTHGLAIAQWYTSL
Ga0164298_100302032	3300012955	Soil	MSWNWRDLVVLTFLVFLFGAAMLANVSDGPLHEHRGSWVTHALR*
Ga0164298_101621812	3300012955	Soil	MWRDLVALTVSVLLLGAAVMANLSGGPLPEHRGSWVTHASR*
Ga0164299_104354973	3300012958	Soil	SWSWRDLVVLTFMVLLFGAAMMANVSDGPMQEYRGSWVARASR*
Ga0164299_114782861	3300012958	Soil	MEFADLVALTFSALLLGAAIMANVSDGPMREHRGSWVTHALR*
Ga0164301_100467613	3300012960	Soil	KREGSMSWNWRDLVVLTFLVFLFGAAMLANVSDGPLHEHRGSWVTHALR*
Ga0164309_110787972	3300012984	Soil	MWRELVGLIFLVLLFGAALMANVTDGPMRDHRGAWVTQASK*
Ga0164308_103745042	3300012985	Soil	MSWNWKNLVILTFLVFLFGAAMVANLSDGPLHEHRGSWARH
Ga0164305_100543771	3300012989	Soil	EGSMSWGWRDLVVLTFLVPLFGAAMIANVSDGPMREHRGSWVTHALR*
Ga0164305_115218451	3300012989	Soil	MSWGWRDLVVLTFLVLLFGAAMIANVSDGPMREHRGSWVTHALR*
Ga0157378_109916941	3300013297	Miscanthus Rhizosphere	MSWNWRDLVVMAFFLLLFGAAMIANMVDGPMREHRGSWVTHALR*
Ga0157378_119253682	3300013297	Miscanthus Rhizosphere	MSWNWRNLVVLTFLVFLFGAAIMANVSDGPFHEYRGSWARHALR*
Ga0163162_104838682	3300013306	Switchgrass Rhizosphere	MWRELVGLIFWLLLFGAALMANVTDGPMREHRGSWVTHALQLSR*
Ga0163162_109283092	3300013306	Switchgrass Rhizosphere	MKGRKGGMWRELVGLTFLGLLLGAAMIANVGDGAMREYRGAWVTH
Ga0163162_111413442	3300013306	Switchgrass Rhizosphere	MWRELVGLIFLVLLFGAALMANVTDGPMRDHRGSWVTQVSK*
Ga0163162_112718684	3300013306	Switchgrass Rhizosphere	MWRDWVALTVSVLLLGAAIIANVTDGPMREHRGAWVARASR*
Ga0163162_121672231	3300013306	Switchgrass Rhizosphere	MWRELVGLIFLALLFGAALMANVTDGPMRDHRASWVTHASVGR*
Ga0157375_113160851	3300013308	Miscanthus Rhizosphere	KKEGSMSWNWRDLVVMAFFVLLFGAAMIANMVDGPMREHRGSWVTHALR*
Ga0157375_136574061	3300013308	Miscanthus Rhizosphere	MSRSWRDLVALTFFVLLFGAAMVANVSDGPLHEYRGSWVARASR*
Ga0163163_116841501	3300014325	Switchgrass Rhizosphere	QTRLEKKEGSMSWNWRNLVVLTFLVFLFGAAMMANVSDGPFHEYRGSWARHALR*
Ga0157380_106482363	3300014326	Switchgrass Rhizosphere	RDLFALTFFVLLFGAAMMANVSDVPMHEYRGSWVARASR*
Ga0157379_102092712	3300014968	Switchgrass Rhizosphere	MSWRWRDLVVLTLLVLLLGAAMIANVSDGPMSEYRGSWVTRASRF*
Ga0157379_104599482	3300014968	Switchgrass Rhizosphere	MSWSWRDLVVLTFMVLLFGAAMMANVSDGPMHEYRGSWVTRASR*
Ga0173483_100373095	3300015077	Soil	ELVALGFLVLLLGAALMANVTDGPMPEQRGSWLTYASK*
Ga0132258_102030162	3300015371	Arabidopsis Rhizosphere	MWRDLIALTFSVLLLGAAVMANLTKGPMPEHRGSWVTHASR*
Ga0132258_133509403	3300015371	Arabidopsis Rhizosphere	MWRDLVALTFSVLLLGAAVMANLSGGPLPEHRGSWVTHA
Ga0132257_1035529571	3300015373	Arabidopsis Rhizosphere	MWRELVGLIFLALLFGAALMANVNDGPMREYRGSWVTYASK*
Ga0132255_1009002462	3300015374	Arabidopsis Rhizosphere	MSWSWRDLVVLTFMVLLFGAAMMANVSDGPMHEYRGAWVTRASR*
Ga0163161_106343282	3300017792	Switchgrass Rhizosphere	MSWSWRDLVALTHFVLLFGATMIANVSDGPMHEYRGSWVTRASR
Ga0163161_115708441	3300017792	Switchgrass Rhizosphere	MSWSWRDLVVVTFLVMLLGAAMVANVSDGPMHEYRGSWVARSSR
Ga0190270_113769552	3300018469	Soil	MSWNWQDLVALTFSALLLGAAIIANVGDGPMRDHRGSWVTQASR
Ga0190274_113541991	3300018476	Soil	RMLRRLRDLLVLMFLVLLLGAAMIANVSDGPMPEYRGS
Ga0190274_117331802	3300018476	Soil	MSWKWQDLVVLTVSTLLLGAAMLATVSDGPMRDHRGWWVTRAL
Ga0190271_108863692	3300018481	Soil	MWRDVVALTLGALLLGAAILANVTDGPMREHRGSWVTRASIGR
Ga0066669_101143314	3300018482	Grasslands Soil	VVVTFLVLVFGAAMIANVSDGPMREHRGSWVTHVLR
Ga0066669_107419541	3300018482	Grasslands Soil	MAWNWRDLVVLIFFVLLFGAAMMAHVSDGPLAEHRGTWVTHALR
Ga0210407_1000078014	3300020579	Soil	MWRDLVALTVSVLLLGAAIIANVSDGPMREHRGAWVTRASR
Ga0210392_1000072020	3300021475	Soil	MWRDLVALTVSVPLLGAAIIANVSDGPMREHRGAWVTRASR
Ga0210410_100849172	3300021479	Soil	MSWNWRDLVELTFLVLLFGAAMIANVSDGPMREHRGSWVTHALR
Ga0207697_103855661	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MSWSWRDLVVLTFMVVLFGAAMMANVSDGPMHEYRGSWVARASR
Ga0207688_103165902	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSWSWRDLVALTFLVLLFGTAMMANMSDGPMHEYRGSWVSRASR
Ga0207647_103543932	3300025904	Corn Rhizosphere	MSWSWRDLVALTLFVLLFGATMIANVSDGPMHEYRGSWVTRASR
Ga0207699_112124532	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MWRELIFWVLLFGAALMANVTGGPMREHRGSWVTHASQL
Ga0207663_116313801	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAWNWRDLVVLTFLVFLFGAAMLANVSDGPLHEHRGSWVTHALR
Ga0207649_106432833	3300025920	Corn Rhizosphere	MSWSWRDLVALTLFVLLFGATMIANVSDGPMHEYRGSWVT
Ga0207701_1001541415	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSWSWRDLFALTFFVLLFGAAMMANVSDGPMHEYRGSWVARASR
Ga0207701_101270714	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSWSWRDLVALTFFVLLFGAAMVANVSDGPLHEYRGSWVARASR
Ga0207706_101798131	3300025933	Corn Rhizosphere	KRIMWWYVVTWSFSVLLLGAAILVNLGDGPMREHRGSWVTHASR
Ga0207686_109653342	3300025934	Miscanthus Rhizosphere	MSWRWRDLVVLTLLVLLLGAAMIANVSDGPMSEYRGSWVTRAS
Ga0207670_111025881	3300025936	Switchgrass Rhizosphere	MSWSWRDLFALTFFVLLFGAAMMANVSDGPMHEYRGSWVA
Ga0207669_106783851	3300025937	Miscanthus Rhizosphere	MSWRWRDLVVLTLLVLLLGAAMIANVSDGPMSEYRGSWVTRALRF
Ga0207704_104783641	3300025938	Miscanthus Rhizosphere	WRDLVALTLFVLLFGATMIANVSDGPMHEYRGSWVTRASR
Ga0207665_105335292	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MWREFVGLTFLGLLLGAAMIANVGDGAMREYRGAWVTHASK
Ga0207661_100604343	3300025944	Corn Rhizosphere	MWRDLVALTFSVLLLGAAVMANLSGGPMPEHRSSWVTHASR
Ga0207651_110057922	3300025960	Switchgrass Rhizosphere	MSRSWRDLVALTFFVLLFGAAMVANVSDGPLHEYRGSWVARASR
Ga0207668_117421132	3300025972	Switchgrass Rhizosphere	WVALTVLVLLLGAAIIANVTDGPMREHRGAWVARASR
Ga0207640_108960212	3300025981	Corn Rhizosphere	MSWSWRDLFALTFFVLLFGAAMMANVSDGPMHEYRGSWVAR
Ga0207639_109777841	3300026041	Corn Rhizosphere	EKGGRMSWSWRDLFALTFFVLLFGAAMMANVSDGPMHEYRGSWVARASR
Ga0207648_102812491	3300026089	Miscanthus Rhizosphere	MSWSWRDLVAVTVLLFGAAMMANVSDGPLHEYRGSWVARASR
Ga0207683_101734264	3300026121	Miscanthus Rhizosphere	MSWSWRDLVALTHFVLLFGATMIANVSDGPMHEYRG
Ga0207683_121229163	3300026121	Miscanthus Rhizosphere	ALTVSVLLLGAAIIANVTDGPMREHRGAWVARASR
Ga0268266_102351371	3300028379	Switchgrass Rhizosphere	MWRDLVALTFSVLLLGAAVMANLSGGPLPEHRGSWVTHASR
Ga0307322_101214341	3300028710	Soil	MSWSWRDLVVLTFSVLLFGAAMMANVSDGPMREYRGSWV
Ga0307503_104560852	3300028802	Soil	GMWRNLVALTFSVLLLGAALMANVGEGPMSEYRGSWLTRASR
Ga0307503_106537162	3300028802	Soil	MSWSWRDLFALTFFVLLFGAAMMANVSDGPMHEYRGSW
Ga0308189_100993822	3300031058	Soil	MSWRWRELVVLTFLVLLLGAAMIANVSDGPMSEYRGSWVTRASRF
Ga0307468_1003852882	3300031740	Hardwood Forest Soil	MEGSMSWNWRNLVVLTFLVFLFGAAMMANVSDGPFHEYRGSWARHALR
Ga0307471_1001666425	3300032180	Hardwood Forest Soil	MWRELVALAFLVLLLGAALMANVTDGPMPEQRGSWLTYASK
Ga0307472_1012826371	3300032205	Hardwood Forest Soil	MWRQLVGLIFWGLLFGAALMANVTDGPMRDHRGSWVTHA