NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F056100

Metagenome Family F056100

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F056100
Family Type Metagenome
Number of Sequences 138
Average Sequence Length 100 residues
Representative Sequence MRRKNVISRFATLVLATLACLLLAVLAPMLSIQRATDEPFSGYAVMASPRDMHVITAPIRLSQAPDLTLNRGTLYADGNAAAGTPISRFVLDGPV
Number of Associated Samples 123
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 70.29 %
% of genes near scaffold ends (potentially truncated) 99.28 %
% of genes from short scaffolds (< 2000 bps) 95.65 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.275 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(11.594 % of family members)
Environment Ontology (ENVO) Unclassified
(20.290 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.406 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176
1JGI1357J11328_101265032
2JGI10213J12805_100729672
3JGI10214J12806_107327431
4JGI10216J12902_1084342201
5Ga0062593_1022166031
6Ga0062595_1005518072
7Ga0066671_108676561
8Ga0066388_1008619852
9Ga0066388_1051383531
10Ga0070680_1017705671
11Ga0070668_1014691441
12Ga0070706_1015365421
13Ga0070686_1013963841
14Ga0070695_1004733441
15Ga0070696_1011874241
16Ga0070704_1017824381
17Ga0066699_102356862
18Ga0070664_1014770081
19Ga0068856_1023129711
20Ga0068859_1031708221
21Ga0066903_1010476261
22Ga0066903_1053603631
23Ga0066903_1082834311
24Ga0068858_1004995511
25Ga0075299_10261781
26Ga0075363_1000897853
27Ga0075026_1005360752
28Ga0070715_105510082
29Ga0079222_114179001
30Ga0075431_1006495483
31Ga0075433_113264551
32Ga0075425_1004181962
33Ga0073934_107888632
34Ga0068865_1015659381
35Ga0075424_1003947601
36Ga0075419_105390211
37Ga0111539_113172372
38Ga0075418_110930041
39Ga0114129_100652525
40Ga0114129_124435302
41Ga0114129_128593171
42Ga0111538_101732923
43Ga0111538_124308331
44Ga0105242_116140651
45Ga0105242_131318801
46Ga0105249_111236681
47Ga0105347_14679501
48Ga0126374_100512532
49Ga0126374_103708062
50Ga0105070_11102341
51Ga0126380_111581791
52Ga0126382_102648141
53Ga0126370_109377222
54Ga0126376_124916762
55Ga0126377_127376981
56Ga0126381_1046326851
57Ga0126383_133692121
58Ga0134127_114024321
59Ga0134122_115375772
60Ga0134123_111445102
61Ga0137716_102370982
62Ga0137325_10387611
63Ga0137314_11675561
64Ga0157284_103365471
65Ga0126375_119806121
66Ga0164303_106817312
67Ga0164303_111650921
68Ga0126369_118881252
69Ga0157375_128407841
70Ga0157375_137713201
71Ga0132257_1014563091
72Ga0132255_1018631102
73Ga0132255_1051497031
74Ga0182041_113826161
75Ga0182035_103417412
76Ga0182035_112194432
77Ga0182032_112460101
78Ga0163161_111577791
79Ga0187781_112815441
80Ga0190272_111002122
81Ga0190270_126328031
82Ga0173482_104854511
83Ga0210406_112336091
84Ga0207688_102499012
85Ga0207685_103623441
86Ga0207684_114485071
87Ga0207660_113687502
88Ga0207687_110973142
89Ga0207704_109286701
90Ga0207651_115743771
91Ga0207703_104678651
92Ga0207678_108352501
93Ga0207708_111293781
94Ga0207702_119693441
95Ga0207675_1016760342
96Ga0209465_103339662
97Ga0209481_103805381
98Ga0209488_102176102
99Ga0207428_102867792
100Ga0209382_100359037
101Ga0247822_106665461
102Ga0247821_110853091
103Ga0247819_109849411
104Ga0307503_106559661
105Ga0247824_106650411
106Ga0310887_109779771
107Ga0318574_103704031
108Ga0318560_100517463
109Ga0306917_113006401
110Ga0318502_105896941
111Ga0318492_103111112
112Ga0318492_104183241
113Ga0318554_103189711
114Ga0318509_106461411
115Ga0306925_109706022
116Ga0310913_101455402
117Ga0306926_117175601
118Ga0318531_100256592
119Ga0306922_102628712
120Ga0306922_110859851
121Ga0310906_104223901
122Ga0310899_102644382
123Ga0318559_104354391
124Ga0318532_102498961
125Ga0318570_101833122
126Ga0318570_105718041
127Ga0318505_102330012
128Ga0310890_105215752
129Ga0318540_104940692
130Ga0310889_107056791
131Ga0306920_1036489191
132Ga0247830_114281261
133Ga0364945_0268026_327_527
134Ga0364927_0267939_1_249
135Ga0364935_0280407_264_545
136Ga0373896_013438_1_240
137Ga0364923_0216686_2_355
138Ga0373958_0074683_456_758
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 24.39%    β-sheet: 9.76%    Coil/Unstructured: 65.85%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MRRKNVISRFATLVLATLACLLLAVLAPMLSIQRATDEPFSGYAVMASPRDMHVITAPIRLSQAPDLTLNRGTLYADGNAAAGTPISRFVLDGPVSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
99.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater
Hot Spring Fe-Si Sediment
Hot Spring Sediment
Soil
Watersheds
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Soil
Agricultural Soil
Soil
Soil
Soil
Soil
Rice Paddy Soil
Tropical Peatland
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Groundwater Sand
Sediment
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Endosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Rhizosphere Soil
Switchgrass Rhizosphere
Corn Rhizosphere
Sediment Slurry
5.1%8.0%3.6%11.6%7.2%7.2%4.3%5.8%2.9%2.9%10.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1357J11328_1012650323300000574GroundwaterMRRKHVISRFTTLFFATLACLLLAVLGPMLLSQRAPDEPFSGYSVMASPRDMHVVMAPIRLSDTPDLTLSRGALYADGNAASGTPISRFVLDVPVFHLNASGLRARPPIESSFADTITGSIATADIAP
JGI10213J12805_1007296723300000858SoilMRRTSVISRLKTLVLATLACVLLALVAPLFIATRAVDEPFSGYSVLASPRDLHVMTKPARLSAAPDLTLSRGVLYADGNAALGTPISRFVLDGPVFYLNASGLKAATAGFDSVVAVGAE
JGI10214J12806_1073274313300000891SoilMKRKNVVSRLTTLVLATLACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYANGNAAGGLPTSRFVLDA
JGI10216J12902_10843422013300000956SoilVPADNNSEVKSGKVEIMRRKNVISRFATLVLVTLACLLLALLAPTLNVKRATDEPFSGYAVMASPRDMHIITSPIRLSHAPDLTLNRGTLYADGNAAAGTPI
Ga0062593_10221660313300004114SoilMRRKNILSRFATLAFATLTCLLVAALAPLLLSKRTTDEPFTGYAVMASPRDMHVVSAPIRLSAAPDLTLSRGTLYADGNASAGTPISRFVLDAPLLHL
Ga0062595_10055180723300004479SoilMRRKNVISRFATLVLATLACLLLAVLAPMLSIQRATDEPFSGYAVMASPRDMHVITAPIRLSQAPDLTLNRGTLYADGNAAAGTPISRFVLDGPV
Ga0066671_1086765613300005184SoilMRRKGAISRFAALVFATLACLLLAVLAPMFFGQRATDEPFSGYAVMASPRDMHVIVAPIRLSDAPDLTLNRGTLYADGNAAAGTPISRFVLDGPVFQLNASGLRASASS
Ga0066388_10086198523300005332Tropical Forest SoilMRRKNVISRLATFVLATLACLLFAVVAPTLFGPRAIDEPFAGYAVMASPRDLHVVTAPIRLSTAPDLTLSRGTLYADGNATAGTPISRFVLDAPVF
Ga0066388_10513835313300005332Tropical Forest SoilMRRTSAISRLKTLVLATAACVLLALVAPLIIAPRAVDEPYSGYAVLASPRDLYVITKPTRLSLAPDLTLSRGVLYADGNAALGTPISRFVLDGPVLYLNTSGLDTTAAAFDGGA
Ga0070680_10177056713300005336Corn RhizosphereMRRSKFISRLSTLFVATLVCLLLAVIAPMLLNQRASDEPFAGYAVMASPRDLHVVTSPIRLSGTP
Ga0070668_10146914413300005347Switchgrass RhizosphereMKRKNVLSRLTTLVLATLACLLLALLAPIFIAHRAVDEPFAGSSVMASPRDLHVVTAPIRLSEAPDLILIRGVLYADGNAAAGLPSSRFVLDAPVFSLNVS
Ga0070706_10153654213300005467Corn, Switchgrass And Miscanthus RhizosphereMKRKNVISRLTTLVLATLACLLLALLAPIFLAHRAVDEPFAGSSVMASPRDLHVVMAPIRLSEAPDLILTRGVLYADGNAAAGLPSSRFVLDAPVF
Ga0070686_10139638413300005544Switchgrass RhizosphereMGSGAGTTRISQAEVYGMRRKNAISRLAALILATLACLLLAVLAPMLFGQRAADEPFSGYAVMASPRDMHVIAAPIRLSDAPDLTLNRGTLYADGNAAAGTAISRFVLDGPVFHLNVSGLRAGPSGFE
Ga0070695_10047334413300005545Corn, Switchgrass And Miscanthus RhizosphereMRRKGAISRFAALVFATLACLLLAVLAPMFFGQRATDEPFSGYAVMASPRDMHVIVAPIRLSDAPDLTLNRGTLYADGNAAAGTPIS
Ga0070696_10118742413300005546Corn, Switchgrass And Miscanthus RhizosphereMRRKNAISRFATLALATLACLLLAVLVPMLWSQRASDEPFAGYTVMASPRDMHVITTPIRLSDAPDLTLNR
Ga0070704_10178243813300005549Corn, Switchgrass And Miscanthus RhizosphereMKRKNVVSRLTTLVLATLACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYAN
Ga0066699_1023568623300005561SoilMRRKGAISRFAALVFATLACLLLAVLAPMFFGQRATDEPFSGYAVMASPRDMHVIVAPIRLSDAPDL
Ga0070664_10147700813300005564Corn RhizosphereMRRKNVISRFATLFLATIACLLLAVLAPLFFGPRATDEPFSGYAVMASPRDMHVITTPMRLSEAPDLTLSRGTLYADGNAAAGTPISRFVLDAPVFHLNVS
Ga0068856_10231297113300005614Corn RhizosphereMRRKGAISRFAALVFATLACLLLAVLAPMFFGQRATDEPFSGYAVMASPRDMHVIVAPIRLSDAPDLTLNRGTLYADGNAAAGTPI
Ga0068859_10317082213300005617Switchgrass RhizosphereMKRKNVISRLTTLVLATVACLLLALLLPIFFAHRAPDEPFSGSSVMASPRDLHVVTAPIQLSVTPDLVLSRGALYADGNVAAGLPISRFVLDGPVFTLNASGLKATSLDFDSGAVGAA
Ga0066903_10104762613300005764Tropical Forest SoilMRRTSVISRLRTLILATLACGLLALIAPLLLATRAVDEPFSGYSVLASPRDLHVITKPARLSSAPDLTLARGVLYADGNA
Ga0066903_10536036313300005764Tropical Forest SoilMRRKHVISRFATFVLTTLACLLFATLAPSLFTSRTVDEPFAGYAVMASPRDLHVVTTPIRLSTAPDLTLSRGTLYADGNAAAGTPISRFVLDAPVFNLNASGLHLHESDLESTLERTL
Ga0066903_10828343113300005764Tropical Forest SoilMRRKNVISRFATFVLATLICLILAVLVPMVFGPRAIDEPFAGYGVMASPRDVHVVTAPIRLSTAPDLTLSRGTLYADGNAAAGTPIS
Ga0068858_10049955113300005842Switchgrass RhizosphereMGRRNVISRFATLVFATIACLLLAVLAPILFGPRATDEPFSGYAVMASPRDMHVITTPIRLSEAPDLTLSRGTLYADGNAAAGTPISR
Ga0075299_102617813300005883Rice Paddy SoilMRRKNVISRFATLVAATLACLLLAVLAPMLFGPRATDEPFSGYAVMASPRDMHVVTAPLRLSAAPDLTLSRGTLYADGNAAAGTPISRFVLDAPVLTLNASGLRTGASDFESSL
Ga0075363_10008978533300006048Populus EndosphereMKRKNVLSRLTTLVLATLACLLLALLAPIFIAHRAVDEPFAGSSVMASPRDLHVVTAPIRLSEAPDLVLVRGALYA
Ga0075026_10053607523300006057WatershedsMRRKNVISRFATLVLATLACLLLAVLAPLFFGPRATDEPFSGYAVMASPRDMHVVTTPFRLSVTPDLTLSRGTIYADGNAAAGTPISRFVLDAPVLHLNASGLRTGASDFDS
Ga0070715_1055100823300006163Corn, Switchgrass And Miscanthus RhizosphereMRRTSVISRLKTLVLATLACVLLALLAPLFIATRAVDEPFSGYSVLASPRDLHVVTKPVRLSSAPDLTLSRGVLYADGNAALGTPISRFVLDGPVFYLNVSGLQDAASGFDSVTL
Ga0079222_1141790013300006755Agricultural SoilMRRKHAISRFATFALATLACLLLAMLGPSFFGSRTIDEPFAGYAVMASPRDLHVVTAPIRLSTAPDLVLSRGTLYADGNAAAGTPISRFVLDAPVFNLNASGLHLHESDLESALESTLASAVAPALV
Ga0075431_10064954833300006847Populus RhizosphereVEGGVSNSKLAKSVKLGKVYLMRRKNVLSRFATLALATLACLLLAVLAPMLSIQRATDEPFSGYAVMASPRDMHVITTSVRLSEAPDLTLNRGTLYADGNVALGTPISRFVLDAPVFYLN
Ga0075433_1132645513300006852Populus RhizosphereMAAVSATPGEPSQSKLGKVYLMRRRNVLSRFATLALATLACLLLAVLAPMISIQRASDEPFSGYAVMASPRDLHVITAPIRLSDAPDLTLNRGTLYADGNAALGTPTSRFVLDGPVFY
Ga0075425_10041819623300006854Populus RhizosphereMKRKNVISRLTTLALATLACLLLALFAPIFFAHRAVDEPFVGSSVMASPRDLHVVTTPVRLSETPDLILDRGVLYADGNATAGLPTSRFVLDAPVFTLNASGF
Ga0073934_1078886323300006865Hot Spring SedimentMKRKNVISRLTTLVFATLVCLLLALLAPLFLANRAPDEPFAGSSVMASPRDLHVVTTPIQLSQAPDLVLTRGSLFADGNAASGLPSSRFVLDSPV
Ga0068865_10156593813300006881Miscanthus RhizosphereVGGGAGTTGKSQAEVYGMRRKSFISRFATLFFATIACLLLAVLAPMLFGPRATDEPFSGYAVMASPRDMHVITAPIRLSDAPDLTLSRGTLYAD
Ga0075424_10039476013300006904Populus RhizosphereMRRKNAISRFATLALATLACLLLAVLAPMLWSQRASDEPFSGYTVMASPRDMHVITTPIRLSDAPDLTLNRGTLYADGNAAAGTPI
Ga0075419_1053902113300006969Populus RhizosphereMRRKNVISRFATLALATLACLLLAVLAPVLLVQRTADEPFSGYSVMASPRDMHVITETVRLGSRPDLTLSRGTLYADGNAASGTPISRFVLDGPVFHLNVSGSRADVPGLEHTTASSIIDVTAPLL
Ga0111539_1131723723300009094Populus RhizosphereMRRTSVISRLKTLVLATLACLLLAVLAPLFIASRAVDEPFSGYSVLASPRDLHVVTKPARLSVAPDLTLSRGVLYADGNAAL
Ga0075418_1109300413300009100Populus RhizosphereMRRKNVISRFATLALATLACLLLAVLAPVLLVQRTADEPFSGYSVMASPRDMHVITETVRLGSRPDLTLSRGTLYADGNAASGTPISRFVLDGPVFHLNVSGSRA
Ga0114129_1006525253300009147Populus RhizosphereMKRKNVVSRLTTLVLATVACLLLAVLAPIFLAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYADGNAAGGMPTSKFVFDAPVFTLNASGFRAAGASLEGDA*
Ga0114129_1244353023300009147Populus RhizosphereMAAVSATPGEPSQSKLGKVYLMRRRNVLSRFATLALATLACLLLAVLAPMISIQRASDEPFSGYAVMASPRDLHVITAPIRLSDAPDLTLNRGTLYA
Ga0114129_1285931713300009147Populus RhizosphereMRRKTVISRFATLVLATLACLLLAVLAPMLSIQRATDEPFSGYTVMASPRDMHVISAPIRLSAAPDLTLNRGTLYA
Ga0111538_1017329233300009156Populus RhizosphereMKRKNVVSRLTTLVLATVACLLLAVLAPIFLAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYA
Ga0111538_1243083313300009156Populus RhizosphereMKRKNVISRLTTLALATLACLLLALLAPIFVAHRAVDEPFAGSSVMASPRDLHVVTAPIRLSEAPDLILVRGVLYADGNAAAGLPSSRFVLDAPVFSLNVSGFKAAGVGLESGPIDAAFAPLVEQLTL
Ga0105242_1161406513300009176Miscanthus RhizosphereMRRKNAISRFATLALATLACLLLAVLVPMLWSQRASDEPFSGYTVMASPRDMHVITTPIRLSDAPDLTLNRGTLYADGNAAAGTPISRFVL
Ga0105242_1313188013300009176Miscanthus RhizosphereMRRKNVISRFAALVFATLACLPLAVLAPLFLGQHATAETFSGYVVMASPRDMHVIAAPIRMSSTPDLTLNRGTLYAD
Ga0105249_1112366813300009553Switchgrass RhizosphereMRRKNAISRFATLALATLACLLLAVLVPMLWSQRASDEPFAGYTVMASPRDMHVITTPIRLSDAPDLTLNRGTLYADGNAAAGTPISRFVLDGPVFYLNA
Ga0105347_146795013300009609SoilMRRKNVISRFATLALATLACLLLAVLAPMLWSQRATDEPFSGYAVMASPRDMHVITTPIRLSDAPDLTLNRGTLYADGNAAAGTPISRFVLDGPVFYLNASGLRTAASSFEASFAGPSIDTV
Ga0126374_1005125323300009792Tropical Forest SoilMRRTSAISRLKTLVLATAACVLLALVAPLIIAPRAVDEPYSGYAVLASPRDLYVITKPTRLSLAPDLTLSRGVL
Ga0126374_1037080623300009792Tropical Forest SoilMRRKHVISRFATFVLTTLAFLLLATLAPSLFNSRTIDEPFAGYAVMASPRDLHVVTTPIRLSTAPDLTLSRGTLYADGNATAGTPISRFVLDAPVFNLNASGLHLHESDLESTLERTLASTVAP
Ga0105070_111023413300009815Groundwater SandMRRKNVLSRFATLALATVACLLLAVLAPMLSIQRTSDEPFSGYAVMASPRDMHAITAPIRISDAPDLTLNRGTLYADGN
Ga0126380_1115817913300010043Tropical Forest SoilMRRKHVISRFATFVLATLACLLLAMLAPSFFASRTIDEPFSGYAVMASPRDLHVVTAPIRLSIAPDLTLSRGTLYADGNAAAGTPISRFVLDAPLFNLN
Ga0126382_1026481413300010047Tropical Forest SoilMRRTSVISRLKTLVLATLACLLLALVAPLFIASRAVDEPFSGYSVLASPRDLHVITKPARLSLAPDLTLSRGVLYADGNAALGTP
Ga0126370_1093772223300010358Tropical Forest SoilMRRTSAISRLKTLVLATAACALLALVAPLIIAPRAVDEPYSGYSVLASPRDLYVITKPTRLSLAPDLTLSRGVLYADGNAALGTPISRFVLDGPVLYLNTSGLDTTAAAFDGG
Ga0126376_1249167623300010359Tropical Forest SoilMRRKNVISRFATFVLATLICLILAVLVPMVFGPRAIDEPFAGYGVMASPRDVHVVTAPIRLSMAPDLTLSRGTLYADG
Ga0126377_1273769813300010362Tropical Forest SoilMRRKNVLSRFATLALATLGCLLLAVLAPMVSIQRASDEPFSGYAVMASPRDMHVISAPIRLSDTPDLTLNRGTLYADGNAALGTPISRFVLDGPVFYLNASGLRTGVSSFEAAFAGLGGSGLE
Ga0126381_10463268513300010376Tropical Forest SoilMGIGARRWQGRQNQAEVKGMRRKHAISRFATFVLATLACLLLAMLAPSFFGSRTIDEPFAGYAVMASPRDLHVVTAPIRLSTAPDLTLSRGTLYADGN
Ga0126383_1336921213300010398Tropical Forest SoilMGIGTRRRHGRQNQAEVKGMRRKHAISRFATFVLATLACLLLAMLAPSFFGSRTIDEPFAGYAVMASPRDLHVVTAPIRLSTAPDLTLSRGTLYADGNAAAGTPISRFVLDAP
Ga0134127_1140243213300010399Terrestrial SoilMKRKNVVSRLTTLVLATVACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYANGNAAGGLPTSRFVLDAPVFALNV
Ga0134122_1153757723300010400Terrestrial SoilMKRKNVVSRLTTLVLATVACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYANGNAAGGLPTSRFVLDAPVFALNVSGFRAAGVSLDSSPMSAAFA
Ga0134123_1114451023300010403Terrestrial SoilMKRKNVISRLTTLVLATLACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVMAPIRLSEAPDLILTRGVLYADGNAAAGLPSSRFVLDAPVFTLNASGFKAAGVSFEAGPVGAAFAPLVEQLT
Ga0137716_1023709823300010938Hot Spring Fe-Si SedimentMRRKTVISRFATLLLATLACLLLALLTPTLLSRRALDEPFSGYSVMASPRDMHVIVAPLRLSSTPGLVLSRG
Ga0137325_103876113300011415SoilMRRKNVISRFATLALATLACLLLAVLAPMLWSQRATDEPFSGYAVMASPRDMHAITAPIRLSDAPDLTLNRGTLYADGNVALGTP
Ga0137314_116755613300011420SoilMRRKNVISRFAILALATLACLLLAVLAPMLWSQRATDEPFSGYAVMASPRDMHVLTTPIRLSDAPDLTLNRGTLYADGNAAAGTPISRFV
Ga0157284_1033654713300012893SoilMKRKNVVSRLTTLVLATLACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYANGNAAGGLPTSRFVLDAPVFALNVSGFRAAGVSLDSSPMSAAFAPLVEQLTM
Ga0126375_1198061213300012948Tropical Forest SoilMRRKHVISRFATFVLATLACLLLAMLAPSFFASRTVDEPFSGYAVMASPRDLHVVTAPIRLSIAPDLTLSRGTLYADGNAAAGTPISRF
Ga0164303_1068173123300012957SoilMRRTSVISRLKTLVLATLACVLLALLAPLFIATRAVDEPFSGYSVLASPRDLHVVTKPVRLSSAPDLTLSRGVLYADGNAALGTP
Ga0164303_1116509213300012957SoilMRRKNAISRFATLALATLACLLLAVLAPMLWSQRASDEPFSGYTVMASPRDMHVITTPIRLSDAPDLTLNRGT
Ga0126369_1188812523300012971Tropical Forest SoilMRRTSAISRLKTLVLATAACVLLALVAPLIIAPRAVDEPYSGYAVLASPRDLYVITKPTRLSLAPDLTLSRGVLYADGNAALGTPISRFVLDGPVLYLNTS
Ga0157375_1284078413300013308Miscanthus RhizosphereMRRKNAISRFATLALATLACLLLAVLAPMLWSQRASDEPFSGYTVMASPRDMHVITTPIRLSDAPDLTRNRGTLYADGNAAAGTPIS
Ga0157375_1377132013300013308Miscanthus RhizosphereMKRKNVVSRLTTLVLATFACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYANGN
Ga0132257_10145630913300015373Arabidopsis RhizosphereMRRKGAISRFAALVFATLACLLLAVLAPMFFGQRATDEPFSGYAVMASPRDMHVIVAPIRLSDAPDLTLNRGTLYADGNAAA
Ga0132255_10186311023300015374Arabidopsis RhizosphereLAVSREGGHGSGKTGKNQAEVDGMGRRNVISRFATLVFATIACLLLAVLAPILFGPRATDEPFSGYAVMASPRDMHVITTPIRLSEAPDLTLSRGTLYADGNAAAGTPISRFVLDAP
Ga0132255_10514970313300015374Arabidopsis RhizosphereMRRTSVISRLKTLVLATLACLLLALLAPLFIASRAVDEPFSGYSVLASPRDLHVVTKPARLSVAPDLTLSRGVLYADGNAALGTPISRFVL
Ga0182041_1138261613300016294SoilMRRKKVISRLTTLVLATLGCLLLALLAPLFLAQRATDEPFLGYSVMASPRDLHVVTGAIRLSSAPDLTLSRGALYADGNAVVGTPISRFVLDGPIFNLKASGRSGRVEAISEKLIAPLVEPLIA
Ga0182035_1034174123300016341SoilMRRKHAISRFATFVLATLACLLLAMLAPSLFGTRTIDEPFAGYALMASPRDLHVVTAPIRLSTAPDLTLSRGTLYADGNAAAGTPIS
Ga0182035_1121944323300016341SoilMRMRRKTLISRLTTLVLTTLGCLLLALLAPLFLAQRASDEPFLGYSVMASPRDMQVVTDAIHLSAAPDLTLNRGALYADGNAVVGT
Ga0182032_1124601013300016357SoilMRRKKLISRLTTLVLATIGCLLLALLAPLFLAQRSTDEPFLGYSVMASPRDLHVVTGAIRLSSAPDLTLSRGALYADGNAVVGTPISRFVLD
Ga0163161_1115777913300017792Switchgrass RhizosphereMRRTSVISRLKTLVLATLACLLLALIAPLFIATRAVDEPFAGYSVLASPRDLHVITKPARLSVTPDLTLSRGVLYADGNAALGTPISRFVLDGPVFYLNASGLSAATAGFGSEVVGSEGAIAP
Ga0187781_1128154413300017972Tropical PeatlandMRRKKLISRLTTLVLATLGCLLLALLAPLFLAQRATDEPFLGYSVMASPRDLHVVTTAIRLSSAPDLTLTRGALYADGNAVV
Ga0190272_1110021223300018429SoilMRRRNLKSRLTTFLLATLVCLLLAVIGPMLLNQRTSDEPFAGYAVMASPRDLAVVTSSIRLSGAPDLTLNRGA
Ga0190270_1263280313300018469SoilMRRKAVISRLTTFVLATLGCLVLALLAPIFLTQRAIDEPFLGYAVMASPRDIHVVASPIRLSEAPDLTLTRGSLYADGNAVIGTPISRFVLDGAVFN
Ga0173482_1048545113300019361SoilMKRKNVVSRLTTLVLATVACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYANGNAAGGLPTSRFVLDAPVFALNVSGFRAAGVSLDSSPMSAAFAPLVEQLTM
Ga0210406_1123360913300021168SoilMRRKHAISRFATFALATLACLLLAMLGPSFFGSRTIDEPFAGYAVMASPRDLHIVTAPIRLSTAPDLTLSRGTLYADGNAAAGTPISRFVLDAPVFNLNASGLPLSESDLESTLESTLA
Ga0207688_1024990123300025901Corn, Switchgrass And Miscanthus RhizosphereMKRKNVVSRLTTLVLATLACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYANGNAAGGLPTSRFVLDAPVFALNVSGFRA
Ga0207685_1036234413300025905Corn, Switchgrass And Miscanthus RhizosphereMRRKGAISRFAALVFATLACLLLAVLAPMFFGQRATDEPFSGYAVMASPRDMHVSVAPIWLSDAPDLTLNRGTLYADGNAAAGTPISRFVLDGPVFQLNA
Ga0207684_1144850713300025910Corn, Switchgrass And Miscanthus RhizosphereMKRKNVISRLTTLVLATLACLLLALLAPIFLAHRAVDEPFAGSSVMASPRDLHVVMAPIRLSEAPDLILTRGVLYADGNAAAGLPSSRFVLDAPVFTLN
Ga0207660_1136875023300025917Corn RhizosphereMRRSKFISRLSTLFVATLVCLLLAVIAPMLLNQRASDEPFAGYAVMASPRDLHVVTSPIRLSGTPDLTL
Ga0207687_1109731423300025927Miscanthus RhizosphereMRRKGAISRFAALVFATLACLLLAVLAPMFFGQRATDEPFSGYAVMASPRDMHVIVAPIRLSDAPDLTLNRGTLYADGNAAAGTPISRFVLDGPVFQLNASGLRASASSMESSLES
Ga0207704_1092867013300025938Miscanthus RhizosphereVGGGAGTTGKSQAEVYGMRRKSFISRFATLFFATIACLLLAVLAPMLFGPRATDEPFSGYAVMASPRDMHVITAPIRLSDAPDLTLSRGTLYADGNAAAGTPISRFVLDASVFHLNAS
Ga0207651_1157437713300025960Switchgrass RhizosphereMRRKGAISRFAALVFATLACLLLAVLAPMFFGQRATDEPFSGYAVMASPRDMHVIVAPIRLSDAPDLTLNRGTLYADGN
Ga0207703_1046786513300026035Switchgrass RhizosphereMGRRNVISRFATLVFATIACLLLAVLAPILFGPRATDEPFSGYAVMASPRDMHVITTPIRLSEAPDLTLSRGTLYADGNAAAGTPISRF
Ga0207678_1083525013300026067Corn RhizosphereMRRTSVISRLKTLVLATLACLLLALLAPLFIASRAVDEPFSGYSVLASPRDLHVVTKPARLSVAPDLTLSRGVLYADGNAALGTPISRFVLDGPTFY
Ga0207708_1112937813300026075Corn, Switchgrass And Miscanthus RhizosphereMRRKNAISRFATLALATLACLLLAVLAPMLWSQRASDEPFAGYTVMASPRDMHVITTPIRLSDAPDLTLNRGTLYADGNAA
Ga0207702_1196934413300026078Corn RhizosphereMRRKGAISRFAALVFATLACLLLAVLAPMFFGQRATDEPFSGYAVMASPRDMHVIVAPIRLSDAPDLTLNRGTLYADGNAAAGTPISRFV
Ga0207675_10167603423300026118Switchgrass RhizosphereMRRKNAISRFATLALATLACLLLAVLAPMLWSQRASDEPFSGYTVMASPRDMHVITTPIRLSDAPDLTLNRGTLYADGNAAAGTPISRFVLDGPVFYLNASGLRTAAASFEASFAGPSIEAI
Ga0209465_1033396623300027874Tropical Forest SoilMRRKNVISRFATFVLATLICLILAVLVPMVFGPRAIDEPFAGYGVMASPRDVHVVTAPIRLSTAPDLTLSRGTLYADGNAAAGT
Ga0209481_1038053813300027880Populus RhizosphereMRRKNVISRFATLALATLACLLLAVLAPVLLVQRTADEPFSGYSVMASPRDMHVITETVRLGSRPDLTLSRGTLYADGNAASGTPISRFVLDGPVFHLNVSGSRAD
Ga0209488_1021761023300027903Vadose Zone SoilMRRKNVISRFATLVLATLACLLLAVLAPMLFGPRATDEPFSGYAVMASPRDMHVIAAPIRLSDAPDLTLNRGTLYADGNAAAGTPISRFVLDGPVFHLNASGLRIDPIAKVR
Ga0207428_1028677923300027907Populus RhizosphereMRRKNVISRFATLALATLACLLLAVLAPVLLVQRTADEPFSGYSVMASPRDMHVITETVRLGSRPDLTLSRG
Ga0209382_1003590373300027909Populus RhizosphereMRRKNVLSRFATLALATLACLLLAVLAPMLSIQRATDEPFSGYAVMASPRDMHVITTSVRLSEAPDLTLNRGTLYADGNV
Ga0247822_1066654613300028592SoilMRRKNVISRFATLALATLACLLLAVLAPVLLVQRTADEPFSGYSVMASPRDMHVITETVRLGSRPDLTLSRGTLYA
Ga0247821_1108530913300028596SoilMAAVSATPGEPSQSKLGKVYLMRRRNVLSRFATLALATLACLLLAVLAPMISIQRASDEPFSGYAVMASPRDLHVITAPIRLSDAPDLTLNRGTLYADGNAALGTPTSRF
Ga0247819_1098494113300028608SoilMRRKNAISRFATLALATLACLLLAVLVPMLWSQRASDEPFAGYTVMASPRDMHVITTPIRLSDAPDLTLNRGTLYADGNAAAGTPISRFVLDGPVFY
Ga0307503_1065596613300028802SoilMKRKNVVSRLTTLVLATIACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYANGNAAGGLPTSRFVLDAPVLALNVSGFRAAGVSLDSSPMGAAFAPLV
Ga0247824_1066504113300028809SoilMRRKNVISRFATLALATLACLLLAVLAPVLLVQRTADEPFSGYSVMASPRDMHVITETVRLGSRPDLTLSRGTLYADGNAAS
Ga0310887_1097797713300031547SoilMKRKNVISRLTTLALATLACLLLALLAPIFIAHRAVDEPFAGSSVMASPRDLHVVTAPIRLSEAPDLILIRGVLYADG
Ga0318574_1037040313300031680SoilMRRKNVISRFATFVLATLICLILAVLVPMIFGPRAIDEPFAGYGVMASPRDVHVVTAPIRLSTAPDLTLSRGTLYADGNAAAGTPIS
Ga0318560_1005174633300031682SoilLTTLVLTTLGCLLLALLAPLFLAQRASDEPFLGYSVMASPRDMQVVTDAIHLSAAPDLTLNRGALYADGNAVVGTPISRFVLDGPVFNLNASGLKSGQSREGEEGATIAPLLEPLITANFDT
Ga0306917_1130064013300031719SoilMRRKKLISRLTTLVLATIGCLLLALLAPLFLAQRATDEPFLGYSVMASPRDLHVVTGAIRLSSAPDLTLSRGALYADGNAVVGTPISRFVLDGPIFNLNASGHSGRVETMSEKLVAPLVEPLIAMNFDTLIIRRGTVHV
Ga0318502_1058969413300031747SoilMRMRRKTLISRLTTLVLTTLGCLLLALLAPLFLAQRASDEPFLGYSVMASPRDMQVVTDAIHLSAAPDLTLNRGALYADGNAVVGTPISRFVLDGPVFNLNASGLKSGQSREGEEGATIAPLLEP
Ga0318492_1031111123300031748SoilMRRKHAISRFATFVLATLACLLLAMLAPSLFGTRTIDEPFAGYALMASPRDLHVVTAPIRLSTAPDLTLSRGTLYADGNAAAGTPISRFVLDAPVFNLNASGLPLSEGD
Ga0318492_1041832413300031748SoilMRRKNVISRFATFVLATLICLILAVLVPMIFGPRAIDEPFAGYGVMASPRDVHVVTAPIRLSTAPDLTLSRGTLYADGNAAAGTPISRFVLDAPVF
Ga0318554_1031897113300031765SoilMRMRRKTLISRLTTLVLTTLGCLLLALLAPLFLAQRASDEPFLGYSVMASPRDMQVVTDAIHLSAAPDLTLNRGALYADGNAVVGTPISRFVLDGPVFNLN
Ga0318509_1064614113300031768SoilMRRKHAISRFATFVLATLACLLLAMLAPSLFGTRTVDEPFAGYALMASPRDLHVVTAPIRLSTAPDLTLSRGTLYADGNAAAGTPISRFVLDAPVFNLNTSGLPLS
Ga0306925_1097060223300031890SoilMRRKKLISRLTTLVLATIGCLLLALLAPLFLAQRSTDEPFLGYSVMASPRDLHVVTGAIRLSSAPDLTLSRGALYADGNAVVGTPISRFVLDGPI
Ga0310913_1014554023300031945SoilMRRKKLISRLTTLVLATIGCLLLALLAPLFLAQRSTDEPFLGYSVMASPRDLHVVTGAIRLSSAPDLTLSRGALYADGNAVVGTPISRFVLDGPIFNLKASGRSGRVEAISEKLIAPLVEPLIAMNFDTLIIRRGTLNV
Ga0306926_1171756013300031954SoilMRRKKVIWRLTTLVLATLGCLLLALLAPLFLAQRATDEPFLGYSVMASPRDLHVVTGAIRLSSAPDLTLSRGALYADGNAVVGTPISRFVLDGPIFN
Ga0318531_1002565923300031981SoilMRMRRKTLISRLTTLVLTTLGCLLLALLAPLFLAQRASDEPFLGYSVMASPRDMQVVTDAIHLSAAPDLTLNRGALYADGNAVVGTPISRFVLDGPVFNLNASGLKSGQSREGEEGATIAPLLEPLITANFDTLIV
Ga0306922_1026287123300032001SoilMRRKKLISRLTTLVLATIGCLLLALLAPLFLAQRSTDEPFLGYSVMASPRDLHVVTGAIRLSSAPDLTLSRGALYADGNAVVGTPISRFVLDGPIFNLKASGRSGRVEAISE
Ga0306922_1108598513300032001SoilMRRKKLIWRLTTLVLATLGCLLLALLAPLFLAQRASDEPFLGYSVMASPRDLHVVATTIRLSSAPDLTLTRGALYADGNAVVGTPISRFVLDGPVFNLNASGRSGRVETLSEKVVAPLVE
Ga0310906_1042239013300032013SoilMKRKNVVSRLTTLVLATVACLLLALLAPIFFAHRAVDEPFAGSSVMASPRDLHVVTTPVRLSEAPDLILTRGVLYANGNAAGGLPTSRF
Ga0310899_1026443823300032017SoilMRRTSVISRLKTLVLATLACLLLALLAPLFIASRAVDEPFSGYSVLASPRDLHVVTKPARLSVAPDLTLSRGVLYADGNAALGTPISRFVLDGPTFYLNASGLEATTGFESEVAGSE
Ga0318559_1043543913300032039SoilMRRKKVISRLTTLVLATLGCLLLALLAPLFLAQRATDEPFLGYSVMASPRDLHVVTGAIRLSSAPDLTLSRGALYADGNAVVGTPISRFVLDGPIFNLKASGRSGRVEAISEKLIAPLVEPLIAMNFDTLIIRR
Ga0318532_1024989613300032051SoilMRRKNVISRFATFVLATLICLILAVLVPMIFGPRAIDEPFAGYGVMASPRDVHVVTAPIRLSTAPDLTLSRGTLYADGNAAAGTPISRFVLDAPVFNLNASGLHPDGGDIE
Ga0318570_1018331223300032054SoilMRMRRKTLISRLTTLVLTTLGCLLLALLAPLFLAQRASDEPFLGYSVMASPRDMQVVTDAIHLSAAPDLTLNRGALYADGNAVVGTPISRFVLDGPVFNLNASGLKSGQSREGEEGATIAPLLEPL
Ga0318570_1057180413300032054SoilMRRKKLISRLTTLVLATIGCLLLALLAPLFLAQRSTDEPFLGYSVMASPRDLHVVTGAIRLSSAPDLTLSRGALYADGNAVVGTPISRFVLDGPIFNLNASGHSGRVETMSEKLVAPLVEPLIA
Ga0318505_1023300123300032060SoilMRRKNVISRFATFVLATLICLILAVLVPMIFGPRAIDEPFAGYGVMASPRDVHVVTAPIRLSTAPDLTLSRGTLYADGN
Ga0310890_1052157523300032075SoilMKRKNVVSRLTTLVLATVACLLLAVLAPIFLAHRAVDEPFAGSSVMASPRDLDVVTTPVRLSEAPDLILTRGVLYADGNAAGGMPTSKFVFDAPVFTLNASGFRAAGASLEGSPMSAALAPLVEQ
Ga0318540_1049406923300032094SoilMRMRRKTLISRLTTLVLTTLGCLLLALLAPLFLAQRAPDEPFLGYSVMASPRDMQVVTDAIHLSAAPDLTLNRGALYADGNAVVG
Ga0310889_1070567913300032179SoilMRRTSVISRLKTLVLATLACLLLALLAPLFIASRAVDEPFSGYSVLASPRDLHVVTKPARLSVAPDLTLSRGVLYAD
Ga0306920_10364891913300032261SoilMRRKTLISRLTTLTLATLGCLLIALLAPLLLSPRATDEPFLGYSVMASPRDMHVITTAIRLSAAPDLTLSRGALYADGNAAVGTPITRFVLDAPVFTLNANGLKPAGGEAAESGDKALLAPLIEPLIAMGFDTLII
Ga0247830_1142812613300033551SoilMAAVSATPGEPSQSKLGKVYLMRRRNVLSRFATLALATLACLLLAVLAPMISIQRASDEPFSGYAVMASPRDLHVITAPIRLSDAPDLTLNRGTLYADGNAALGTPTSRFVLDGPVFYLNASGLRT
Ga0364945_0268026_327_5273300034115SedimentMRRKNVISRFAILALATLACLLLAVLAPMLWSQRATDEPFSGYTVMASPRDMHVITTPIRLSDAPDL
Ga0364927_0267939_1_2493300034148SedimentVPADNNSEVKSGKVEIMRRKNVISRFATLVLVTLACLLLALLAPTLNVKRATDEPFSGYAVMASPRDMHIITSPIRLSHAPDL
Ga0364935_0280407_264_5453300034151SedimentVPADNNSEVKSGKVEIMRRKNVISRFATLVLVTLACLLLALLAPTLNVKRAIDEPFSGYAVMASPRDMHIITSPIRLSHAPDLTLNRGTLYADG
Ga0373896_013438_1_2403300034192Sediment SlurryMRRTSVISRLKTLVLATLACVLLALVAPLFIATRAVDEPFSGYSVLASPRDLHVMTKPARLSAAPDLTLSRGVLYADGNA
Ga0364923_0216686_2_3553300034690SedimentVPADNTSEVKSGKVEIMRRKNVISRFATLVLVTLACLLLALLAPTLNVKRATDEPFSGYAVMASPRDMHIITSPIRLSHAPDLTLNRGTLYADGNAAGGTPISRFVLDNPVFYLDASG
Ga0373958_0074683_456_7583300034819Rhizosphere SoilMRRTSVISRLKTLVLATLACLLLALLAPLFIASRAVDEPFSGYSVLASPRDLHVVTKPARLSVAPDLTLSRGVLYADGNAALGTPISRFVLDGPTFYLNAS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.