Metagenome / Metatranscriptome Family F056011

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056011
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	42 residues
Representative Sequence	TAYRWFALALHKEPDNQALQDDLQKLWSQMTQPERQLAIKLSQ
Number of Associated Samples	118
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.83 %
% of genes from short scaffolds (< 2000 bps)	92.75 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.029 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.768 % of family members)
Environment Ontology (ENVO)	Unclassified (23.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.30% β-sheet: 0.00% Coil/Unstructured: 50.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF04542	Sigma70_r2	17.39
PF08281	Sigma70_r4_2	15.94
PF13193	AMP-binding_C	6.52
PF05362	Lon_C	6.52
PF00782	DSPc	5.07
PF13490	zf-HC2	5.07
PF13350	Y_phosphatase3	4.35
PF03162	Y_phosphatase2	1.45
PF00144	Beta-lactamase	0.72
PF13517	FG-GAP_3	0.72
PF06172	Cupin_5	0.72
PF02661	Fic	0.72
PF00275	EPSP_synthase	0.72
PF04273	BLH_phosphatase	0.72
PF00463	ICL	0.72
PF02742	Fe_dep_repr_C	0.72
PF13460	NAD_binding_10	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	17.39
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	17.39
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	17.39
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	17.39
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	6.52
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	6.52
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	6.52
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	6.52
COG2365	Protein tyrosine/serine phosphatase Oca4	Signal transduction mechanisms [T]	1.45
COG1321	Mn-dependent transcriptional regulator MntR, DtxR family	Transcription [K]	0.72
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.72
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG2224	Isocitrate lyase	Energy production and conversion [C]	0.72
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.72
COG3453	Predicted phosphohydrolase, protein tyrosine phosphatase (PTP) superfamily, DUF442 family	General function prediction only [R]	0.72
COG3542	Predicted sugar epimerase, cupin superfamily	General function prediction only [R]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.03 %
Unclassified	root	N/A	7.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.03 %
Unclassified	root	N/A	7.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.03 %
Unclassified	root	N/A	7.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.64 %
Unclassified	root	N/A	7.97 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.72 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.70 %
Unclassified	root	N/A	7.97 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
bacterium ADurb.Bin425	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin425	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.70 %
Unclassified	root	N/A	7.97 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.72 %
bacterium ADurb.Bin425	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin425	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.70 %
Unclassified	root	N/A	7.97 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.72 %
bacterium ADurb.Bin425	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin425	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.54 %
Unclassified	root	N/A	7.97 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
bacterium ADurb.Bin425	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin425	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.54 %
Unclassified	root	N/A	7.97 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.07 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
bacterium ADurb.Bin425	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin425	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10104208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1223	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1018786	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300001084\|JGI12648J13191_1014047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300001356\|JGI12269J14319_10053902	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300001356\|JGI12269J14319_10066842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2005	Open in IMG/M
3300001356\|JGI12269J14319_10320085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300002245\|JGIcombinedJ26739_101563563	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300002245\|JGIcombinedJ26739_101567513	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300004973\|Ga0072322_1328627	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300005435\|Ga0070714_102508943	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300005534\|Ga0070735_10354449	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300005537\|Ga0070730_10467982	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300005541\|Ga0070733_10320957	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300005541\|Ga0070733_10834611	Not Available	619	Open in IMG/M
3300005541\|Ga0070733_11208763	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300005542\|Ga0070732_10297217	All Organisms → cellular organisms → Bacteria → Acidobacteria	969	Open in IMG/M
3300005712\|Ga0070764_10166711	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300006028\|Ga0070717_11563043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300006102\|Ga0075015_101043852	Not Available	502	Open in IMG/M
3300006162\|Ga0075030_101532624	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300006173\|Ga0070716_100038629	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2644	Open in IMG/M
3300006176\|Ga0070765_100036723	All Organisms → cellular organisms → Bacteria	3879	Open in IMG/M
3300006176\|Ga0070765_102199384	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300006893\|Ga0073928_10626590	Not Available	757	Open in IMG/M
3300009038\|Ga0099829_11044626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300009088\|Ga0099830_11074131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300009148\|Ga0105243_10571663	Not Available	1084	Open in IMG/M
3300009521\|Ga0116222_1214295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300009614\|Ga0116104_1070279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300009645\|Ga0116106_1109973	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300009762\|Ga0116130_1232238	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300009839\|Ga0116223_10427837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300010048\|Ga0126373_11667240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300010360\|Ga0126372_10170658	All Organisms → cellular organisms → Bacteria → Acidobacteria	1770	Open in IMG/M
3300010379\|Ga0136449_102765395	Not Available	694	Open in IMG/M
3300011120\|Ga0150983_10261703	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300011120\|Ga0150983_15201835	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300011120\|Ga0150983_15502930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300012203\|Ga0137399_11393944	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300012210\|Ga0137378_10566701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300012354\|Ga0137366_10094766	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300012469\|Ga0150984_114446801	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300012683\|Ga0137398_10869372	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300012685\|Ga0137397_11140427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300012918\|Ga0137396_11033755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300012927\|Ga0137416_10039906	All Organisms → cellular organisms → Bacteria → Proteobacteria	3211	Open in IMG/M
3300014495\|Ga0182015_10406157	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300014501\|Ga0182024_12269501	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300015241\|Ga0137418_11189733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300015262\|Ga0182007_10273686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300016422\|Ga0182039_10878729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300016702\|Ga0181511_1291858	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300017970\|Ga0187783_10680772	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300018008\|Ga0187888_1156623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300018037\|Ga0187883_10553257	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300018085\|Ga0187772_10530845	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300018086\|Ga0187769_10422992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300018088\|Ga0187771_11550059	Not Available	562	Open in IMG/M
3300018090\|Ga0187770_10569871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300018482\|Ga0066669_11735140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300019082\|Ga0187852_1140170	All Organisms → cellular organisms → Bacteria → Acidobacteria	1033	Open in IMG/M
3300020581\|Ga0210399_10666978	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300020582\|Ga0210395_10617409	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300020582\|Ga0210395_11310349	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300021171\|Ga0210405_10818976	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300021171\|Ga0210405_10971644	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300021178\|Ga0210408_10323539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1230	Open in IMG/M
3300021178\|Ga0210408_10985832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300021180\|Ga0210396_10646019	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300021181\|Ga0210388_11233512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300021402\|Ga0210385_10352480	All Organisms → cellular organisms → Bacteria → Acidobacteria	1099	Open in IMG/M
3300021405\|Ga0210387_10650752	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300021405\|Ga0210387_11004556	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300021432\|Ga0210384_11120431	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300021477\|Ga0210398_11226314	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300021559\|Ga0210409_11733518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300021560\|Ga0126371_10658538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1196	Open in IMG/M
3300021560\|Ga0126371_13190706	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300021860\|Ga0213851_1754084	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300022505\|Ga0242647_1025180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300022522\|Ga0242659_1066014	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300022721\|Ga0242666_1121894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300022840\|Ga0224549_1027173	Not Available	779	Open in IMG/M
3300025446\|Ga0208038_1080132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300025898\|Ga0207692_10086197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1692	Open in IMG/M
3300025898\|Ga0207692_10709739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300025922\|Ga0207646_11634911	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin425	555	Open in IMG/M
3300026291\|Ga0209890_10218990	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300026552\|Ga0209577_10832357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300027181\|Ga0208997_1057429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300027297\|Ga0208241_1048770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300027432\|Ga0209421_1098342	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300027576\|Ga0209003_1031758	Not Available	898	Open in IMG/M
3300027678\|Ga0209011_1074815	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300027783\|Ga0209448_10167570	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300027824\|Ga0209040_10180301	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300027826\|Ga0209060_10422894	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300027857\|Ga0209166_10465837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300027867\|Ga0209167_10569488	Not Available	620	Open in IMG/M
3300027879\|Ga0209169_10188005	All Organisms → cellular organisms → Bacteria → Acidobacteria	1079	Open in IMG/M
3300027889\|Ga0209380_10108486	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300027889\|Ga0209380_10774488	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300027895\|Ga0209624_10628488	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300027905\|Ga0209415_10280495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1461	Open in IMG/M
3300027911\|Ga0209698_10031698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4829	Open in IMG/M
3300027986\|Ga0209168_10260687	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300028047\|Ga0209526_10784395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300028780\|Ga0302225_10560815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300028798\|Ga0302222_10291224	Not Available	636	Open in IMG/M
3300028906\|Ga0308309_10820314	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300029636\|Ga0222749_10224224	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300029907\|Ga0311329_10233573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1381	Open in IMG/M
3300029918\|Ga0302143_1182679	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300029939\|Ga0311328_10435779	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	934	Open in IMG/M
3300029944\|Ga0311352_10924196	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300030490\|Ga0302184_10160347	All Organisms → cellular organisms → Bacteria → Acidobacteria	969	Open in IMG/M
3300030580\|Ga0311355_10268170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1736	Open in IMG/M
3300030617\|Ga0311356_11306003	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300030760\|Ga0265762_1014555	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300031057\|Ga0170834_100768809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300031090\|Ga0265760_10160633	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300031525\|Ga0302326_11702238	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300031708\|Ga0310686_101175385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1457	Open in IMG/M
3300031708\|Ga0310686_104191040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300031715\|Ga0307476_10047005	All Organisms → cellular organisms → Bacteria	2930	Open in IMG/M
3300031715\|Ga0307476_10059813	All Organisms → cellular organisms → Bacteria → Acidobacteria	2618	Open in IMG/M
3300031715\|Ga0307476_10307414	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300031715\|Ga0307476_11283591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300031823\|Ga0307478_11227330	Not Available	624	Open in IMG/M
3300031912\|Ga0306921_11169761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300031962\|Ga0307479_10383398	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300032174\|Ga0307470_10370288	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300032770\|Ga0335085_12256780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300032783\|Ga0335079_10179723	All Organisms → cellular organisms → Bacteria → Acidobacteria	2358	Open in IMG/M
3300032805\|Ga0335078_10418192	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1752	Open in IMG/M
3300032828\|Ga0335080_11151262	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300034163\|Ga0370515_0167133	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300034163\|Ga0370515_0427219	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.83%
Host-Associated	Host-Associated	2.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.96%
Aquatic	Environmental → Aquatic	10.87%
Plants	Host-Associated → Plants	2.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.99%
Freshwater	Environmental → Aquatic → Freshwater	7.97%
Peat	Environmental → Terrestrial → Peat	7.97%
Sediment	Environmental → Aquatic → Sediment	2.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.17%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	18.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.35%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.17%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.25%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.25%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.07%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.07%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.07%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.17%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.17%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.45%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.45%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.72%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004973	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025446	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101042081	3300000567	Peatlands Soil	YRWFAFALRKQPDNEPLQENLQKIWAQMTQPERQLAVKLTQ*
AP72_2010_repI_A01DRAFT_10187861	3300000579	Forest Soil	LALRKDPENTSIHADLSKLWKEMTPAEQQLAIKLTQ*
JGI12648J13191_10140471	3300001084	Forest Soil	RWFAMALRKDPDNQPVQADLQKLWGEMTQPERQLAIKLSQ*
JGI12269J14319_100539021	3300001356	Peatlands Soil	AYRWFALALRKDPDNEAVQTDLQKLWGEMTQPERQLAIKLSQ*
JGI12269J14319_100668423	3300001356	Peatlands Soil	YRWFALALRKDPNNESLQADLNKLWGEMTQPERQLAIKLSQ*
JGI12269J14319_103200851	3300001356	Peatlands Soil	LPTAYRWFALALHKEPDNQALQEDLQKLWSQMTQPERQLAIKLSQ*
JGIcombinedJ26739_1015635631	3300002245	Forest Soil	LHKQPDNQPLQDDLQKLWNQMTQPERQLAIKLSQ*
JGIcombinedJ26739_1015675131	3300002245	Forest Soil	FALALRKQPDDQPLQDNMKKLWGDMTQPERQLAIRLSQ*
Ga0072322_13286271	3300004973	Peatlands Soil	TPRDLPTAYRWFALALRKDPDNQAVQTDLQKLWGEMTQPERQLAIRLSQ*
Ga0070714_1025089432	3300005435	Agricultural Soil	TPRDLPTAYRWFALALRKDPENTSIHTDLSKLWKEMTPAEQQLAIKLTQ*
Ga0070735_103544492	3300005534	Surface Soil	TAYRWFALALRKDPDNESVQTDLQKLWGEMTQPERQLAIKLSQ*
Ga0070730_104679821	3300005537	Surface Soil	LPTAYRWFALALRKEPDNVAVQGDLQKLWGEMTQPERQLAIRLTH*
Ga0070733_103209573	3300005541	Surface Soil	TPRDLPTAYSWFARALRKEPDSTSVQTDLQKLWSEMTQPERQLAIKLSQ*
Ga0070733_108346111	3300005541	Surface Soil	PRDLPTAYRWFAMALRKDPSNDAVQTDLKKLWGEMTQPERQLAIKLTQ*
Ga0070733_112087632	3300005541	Surface Soil	PRDLPTAYRWFALALRKEPDNQAVQTDLQKLWGEMTQPERQLAIRLSQ*
Ga0070732_102972171	3300005542	Surface Soil	RWFALALRKQPDNASIQADLQKLWSEMTQPERQLAIKLSQ*
Ga0070764_101667112	3300005712	Soil	AYRWFALALHKEPDNQALQDDLQKLWSQMTQPERQLAIRLSQ*
Ga0070717_115630431	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HDLPTAYRWFAMALRKDPENQAIQGDLQKLWGEMTQPERQLAIKLTQ*
Ga0075015_1010438522	3300006102	Watersheds	PHDLPTAYRWFAMALRKEPDNQSVQADLQKLWGEMTQPERQLAIKLSQ*
Ga0075030_1015326242	3300006162	Watersheds	LALRKDPENTAAQEDLSKLWSEMTPPERQLAIKLSQ*
Ga0070716_1000386291	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LRKDPENQAVQADLQKLWGEMTQPERQLAIKLSQ*
Ga0070765_1000367235	3300006176	Soil	TAYRWFAMALRKDPDNQAVQADLQKLWSEMTQPERQLAIKLSQ*
Ga0070765_1021993841	3300006176	Soil	ALRKQPDDQPLQDNMKKLWGDMTQPERQLAIRLSQ*
Ga0073928_106265902	3300006893	Iron-Sulfur Acid Spring	ALHKEPDNQALQNDLQNLWRKMTRPERQLAIKLSQ*
Ga0099829_110446261	3300009038	Vadose Zone Soil	LALRKQPDNQPLQENLQRLWTQMTQPERQLAIKLSQ*
Ga0099830_110741311	3300009088	Vadose Zone Soil	RDLPTAYRWFALALRKQPDNQPLQENLQRLWSQMTQPERQLAIKLSQ*
Ga0105243_105716631	3300009148	Miscanthus Rhizosphere	TAYRWFAVALRKDPSNQSIQTDLQKLWGEMTQPERQLAIKLTQ*
Ga0116222_12142952	3300009521	Peatlands Soil	WFALALRKEPDNQSVQTDLQKLWGEMTQPERQLAIKLSQ*
Ga0116104_10702792	3300009614	Peatland	ALALHKQPDNQPLQDDLQKLWSQMTQPERQLAIKLSQ*
Ga0116106_11099731	3300009645	Peatland	MALHKQPDNLPLQDDLQKLWSQMTQPERQLAIKLSQ*
Ga0116130_12322381	3300009762	Peatland	ALALHKQPDNEALQDNLQKLWSQMTPPERQLAIKLSQ*
Ga0116223_104278371	3300009839	Peatlands Soil	LRKDPDNEAVQTDLQKLWGEMTQPERQLAIKLSQ*
Ga0126373_116672401	3300010048	Tropical Forest Soil	IALRKDPENTAIQADLSKLWGEMTQPERQLAIKLTQ*
Ga0126372_101706583	3300010360	Tropical Forest Soil	MALRKDPDNTALHSDLTKLWGEMTQPERQLAIKMTQ*
Ga0136449_1027653952	3300010379	Peatlands Soil	LHKEPDNQALQNNLQNLWSTMTPPERQLAIKLSQ*
Ga0150983_102617031	3300011120	Forest Soil	DLPTAYRWFALALRKDPDNESVQTDLQKLWGEMTQPERQLAIKLSQ*
Ga0150983_152018352	3300011120	Forest Soil	RWFALALRKDPANQPLQADLQKLWGEMTQPERQLAIQLSQ*
Ga0150983_155029301	3300011120	Forest Soil	LPTAYRWFALALHKEPDNQALQDDLQKLWSQMTQPERQLAIKLSQ*
Ga0137399_113939441	3300012203	Vadose Zone Soil	DLPTAYRWFALALHKQPDNQALQDYPESLWDKMTQPERQLAIKFSQ*
Ga0137378_105667012	3300012210	Vadose Zone Soil	AYRWFALALRKDPENSAVQADLQKLWGEMTQPERQLAIKLSQ*
Ga0137366_100947663	3300012354	Vadose Zone Soil	PTAYRWFALALRKDPENSAVQADLQKLWGEMTQPERQLAIKLSQ*
Ga0150984_1144468013	3300012469	Avena Fatua Rhizosphere	WFALALRRDPENNAVQADLQKLWSEMTQPERQLAIKLSQ*
Ga0137398_108693721	3300012683	Vadose Zone Soil	YRWFALALHKQPDNQVLQDELQKLWRQMTPPERQLAIKLSQ*
Ga0137397_111404271	3300012685	Vadose Zone Soil	LALRKEPDNMSVQSDLQKLWGEMTQPERQLAIRLTH*
Ga0137396_110337551	3300012918	Vadose Zone Soil	RWFAVALRKEPDNPALQQNLQKLWSQMTRPERQLAIKLSQ*
Ga0137416_100399061	3300012927	Vadose Zone Soil	APRDLPTAYRWFAVALRKEPDNPALQQNLQKLWSQMTRPEQQLAIKLSQ*
Ga0182015_104061571	3300014495	Palsa	TPRDLPTAYRWFALALRKQPDNQPLQESLQKIWAQMTPPERQLAIRLSQ*
Ga0182024_122695012	3300014501	Permafrost	FAMALHKDPDNQSVQTDLQKLWGEMTQPERQLAIKLSQ*
Ga0137418_111897331	3300015241	Vadose Zone Soil	DLPTAYRWFAMALHKQPDNQALQNDLQKLWSQMTPPERQLAIKLSQ*
Ga0182007_102736862	3300015262	Rhizosphere	FAVALRKDPSNEAIQSDLQKLWGEMTQPERQLAIKLTQ*
Ga0182039_108787292	3300016422	Soil	DLPTAYRWFAIALRKDPENTSVQADLSKLWSEMTQPERQLAIKLTQ
Ga0181511_12918582	3300016702	Peatland	WFAMALHKQPDNLPLQDDLQKLWSQMTQPERQLAIKLSQ
Ga0187783_106807722	3300017970	Tropical Peatland	PTAYRWFALALHKEPENQVLQDDLQKLWGQMTQPERQLAIRLSQ
Ga0187888_11566231	3300018008	Peatland	PRDLPTAYRWFAMALHKEPDNLRLQNDLQNLWSQMTQPERQLAIKLSQ
Ga0187883_105532571	3300018037	Peatland	PRDLPTAYRWYALALHKQTDNQTLQDDLQNLWGKMTPPERQLAIKLSQ
Ga0187772_105308451	3300018085	Tropical Peatland	YRWFALALHKDPDNKTLQDDLQNLWGQMTPPERQLAIKLSQ
Ga0187769_104229922	3300018086	Tropical Peatland	AYRWFALALRKDPTNESLQSDLQKLWGEMTQPERQLAIRLSQ
Ga0187771_115500592	3300018088	Tropical Peatland	ALALRKDPNNESLQADLQKLWGEMTQPERQLAIKLSQ
Ga0187770_105698713	3300018090	Tropical Peatland	AYRWFALALRKDPSNQSVAADLQKLWREMTQPERQLAIRLSQ
Ga0066669_117351402	3300018482	Grasslands Soil	YRWFAVALRKDPSNQAIQTDLQKLWGEMTQPERQLAIKLTQ
Ga0187852_11401701	3300019082	Peatland	PRDLPTAYLWFARALHKQPDNQGLQDDLQKLWGQMTQPERQLAIKLSQ
Ga0210399_106669781	3300020581	Soil	RWFAQALHKQPDNQTLQDDLQNLWSKMTPPERQLAIKLSQ
Ga0210395_106174092	3300020582	Soil	WFAQALHKQPDNQRLQDDLQKLWGQMTPPERQLAIKLSQ
Ga0210395_113103491	3300020582	Soil	PTAYRWFAMALRKDPDNQPVQADLQKLWSEMTQPERQLAIKLSQ
Ga0210405_108189762	3300021171	Soil	TPHDLPTAYRWFALALRKDPNNMAVQTDLQKLWGEMTQPERQLAIKLSQ
Ga0210405_109716442	3300021171	Soil	LALRKQPNDQPLQQNMEKLWGRMTQPERQLAIRLSQ
Ga0210408_103235393	3300021178	Soil	TPRDLPTAYRWFALALRKDPDNQAVQTDLQKLWGEMTQPERQLAIRLSQ
Ga0210408_109858322	3300021178	Soil	LPTAYRWFAMALRKDPDNQAVQADLQKLWSEMTQPERQLAIKLSQ
Ga0210396_106460191	3300021180	Soil	PHDLPTAYRWFALALRKDPDNESVQTDLQKLWGEMTQPERQLAIKLSQ
Ga0210388_112335121	3300021181	Soil	PRDLPTSYRWIALALRKEPDNQALKDNLQKLWSEMTQPERQLAIKLSQ
Ga0210385_103524803	3300021402	Soil	FALALRKDPANQPLQADLQKLWGEMTQPERQLAIKLSQ
Ga0210387_106507522	3300021405	Soil	WIALALRKEPDNQALKESLQKLWSEMTQPERQLAIKLSQ
Ga0210387_110045561	3300021405	Soil	LPTAYSWFSKVLRRDPDNKAASDDLNKLWGEMTQPERQLAIKLSQ
Ga0210384_111204312	3300021432	Soil	WFALALRKQPDNASIQADLQKLWSEMTQPERQLAIKLSQ
Ga0210398_112263142	3300021477	Soil	FALALHKDPDNQALQDDLQKLWSQMTPPERQLAIKLSQ
Ga0210409_117335182	3300021559	Soil	AYRWFAVALRKEPDNPALQQNLQKLWSQMTQPERHLAIKLSQ
Ga0126371_106585383	3300021560	Tropical Forest Soil	DLPTAYRWFALALRRDPENSAVQADLSKLWSEMTPPERQLAIKLSQ
Ga0126371_131907061	3300021560	Tropical Forest Soil	MALRKEPDNASVQNDLQKLWGEMTQPERQLAIKLSQ
Ga0213851_17540842	3300021860	Watersheds	ALALRKDPDNQAVQTDLKKLWGEMTQPERQLAIKLSH
Ga0242647_10251801	3300022505	Soil	PTAYRWYAVALHKEPDNQALQNDLQKLWSQMTQPERQLAIRLSQ
Ga0242659_10660142	3300022522	Soil	LPTAYRWFALALRKDPDNQSVQADLSKLWGEMTQPERQLAIKLSQ
Ga0242666_11218941	3300022721	Soil	TAYRWFALALHKEPDNQALQDDLQKLWSQMTQPERQLAIKLSQ
Ga0224549_10271731	3300022840	Soil	TCTPRDLPTAYRWFALALHKEPENTALQQDLQKLWGQMTQPERQLAIKLSQ
Ga0208038_10801321	3300025446	Peatland	FALALHKQPDNQPLQDDLQKLWSQMTQPERQLAIKLSQ
Ga0207692_100861971	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TAYRWFALALRKDPENTSIHADLSKLWKEMTPAEQQLAIKLTQ
Ga0207692_107097392	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RWFAVALRKDPSNEAIQNDLQKLWGEMTQPERQLAIKLTQ
Ga0207646_116349112	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LPTAYRWFAMALRKDPNNQSVQADLQKLWSEMTQPERQLAIKLSQ
Ga0209890_102189902	3300026291	Soil	PTAYRWFALALRKQPDNQSVQTDLKKLWGEMTQPERQLAMKLSQ
Ga0209577_108323571	3300026552	Soil	PTAYRWFALALRKDPENQQLQDNLQRLWVQMTQPERQLAVKLSQ
Ga0208997_10574292	3300027181	Forest Soil	TPRDLPTAYRWFALALRKQPDNQPLQENLQRLWAQMTQPERQLAIKLSQ
Ga0208241_10487701	3300027297	Forest Soil	ALHKEPDNQALQDDLQKLWSQMTQPERQLAIKLSQ
Ga0209421_10983421	3300027432	Forest Soil	MALHQQPDNQPVQNDLQDIWAKMTQPERQLAIKLSQ
Ga0209003_10317581	3300027576	Forest Soil	ALRKQPDNQAVQADLQKLWREMTQPERQLAIKLSQ
Ga0209011_10748152	3300027678	Forest Soil	ALALRKQPDNLPLQENLQRLWAQMTQPERQLAIKLSQ
Ga0209448_101675702	3300027783	Bog Forest Soil	DLPTAYHWFALALRKQPNDQPLQQNMEKLWGRMTQPERQLAIRLSQ
Ga0209040_101803013	3300027824	Bog Forest Soil	GTCAPRDLPTAYRWFALALHKEPDNQALQEDLQNLWGKMTPPERQLAIKLSQ
Ga0209060_104228942	3300027826	Surface Soil	PRDLPTAYRWFALALHKDPDNQSVQTDLQKLWGEMTQPERQLAIRLSQ
Ga0209166_104658371	3300027857	Surface Soil	LPTAYRWFALALRKEPDNVAVQGDLQKLWGEMTQPERQLAIRLTH
Ga0209167_105694882	3300027867	Surface Soil	TPRDLPTAYRWFAMALRKDPSNDAVQTDLKKLWGEMTQPERQLAIKLTQ
Ga0209169_101880051	3300027879	Soil	RDLPTAYRWFALALHQEPDNQALQDDLQRLWSQMTQPERQLAIKLSQ
Ga0209380_101084861	3300027889	Soil	DLPTAYRWFALALHKEPDNQALQDDLQKLWSQMTQPERQLAIRLSQ
Ga0209380_107744881	3300027889	Soil	ALHQQPDNQPVQNDLQDIWAKMTQPERQLAIKLSQ
Ga0209624_106284882	3300027895	Forest Soil	WFALALHKQPDNQPLQDDLQKLWNQMTQPERQLAIKLSQ
Ga0209415_102804953	3300027905	Peatlands Soil	ALRKDPDNQAVQTDLQKLWGEMTQPERQLAIKLSQ
Ga0209698_100316981	3300027911	Watersheds	RDLPTAYRWFALALRKDPDNQAVQTDLKKLWGEMTQPERQLAIRLSQ
Ga0209168_102606871	3300027986	Surface Soil	LPTAYRWFALALRKDPDNESVQTDLQKLWGEMTQPERQLAIKLSQ
Ga0209526_107843952	3300028047	Forest Soil	PRDLPTAYRWFALALRKQPDNQPLQENLQRLWAQMTQPERQLAIKLSQ
Ga0302225_105608151	3300028780	Palsa	ALRKQPDDQPLQDNMKKLWGDMTQPERQLAIRLSQ
Ga0302222_102912241	3300028798	Palsa	TPRDLPTAYRWFALALHKEPDNQALQDDLQRLWSRMTQPERQLAIRLSR
Ga0308309_108203142	3300028906	Soil	RDLPTAYRWFALALHQEPDNQALQDDLQKLWSQMTQPERQLAIKLSQ
Ga0222749_102242241	3300029636	Soil	YRWFALALHKQPDNQVLQDDLKSLWDKMTPPERQLAIKLSQ
Ga0311329_102335731	3300029907	Bog	WYALALHKQPDNQGLQDDLKKLWDKMTQPERQLAIKLSQ
Ga0302143_11826792	3300029918	Bog	LPTAYRWFAQALHKQPDNQALQDDLKNLWEKMTPPERQLAIKLSH
Ga0311328_104357792	3300029939	Bog	DLPTAYRWFALALHREPENQALQQDLQKLWGQMTQPERQLAIKLSQ
Ga0311352_109241962	3300029944	Palsa	RWFAQALHKDPDNNSLQTDLNKLWSEMTPPERQLAIKLSQ
Ga0302184_101603473	3300030490	Palsa	PTAYRWYALALHKEPDNQTLQDDLQQLWSQMTPPERQLAIKLSQ
Ga0311355_102681701	3300030580	Palsa	TPRDLPTAYRWFALALHKQPDNQALQDGLQKLWSQMTPPERQLAIKLSQ
Ga0311356_113060031	3300030617	Palsa	WFALALHKEPDNQALQDDLQRLWSRMTQPERQLAIRLSR
Ga0265762_10145551	3300030760	Soil	HWFALALRKQPDDQPLQDNMKKLWGDMTQPERQLAIRLSQ
Ga0170834_1007688091	3300031057	Forest Soil	MALHKQPDNAALQDDLKKLWGQMTPPERQLAIRLSQ
Ga0265760_101606332	3300031090	Soil	ALHKDPDNQALQDDLQKLWSQKTQPERQLAIKLSQ
Ga0302326_117022381	3300031525	Palsa	TAYRWFALALHKEPDNQALQQDLQKLWGQMTQPERQLAIKLSQ
Ga0310686_1011753853	3300031708	Soil	RWFAMALHKEPDNQALQDDLQKLWSKMTPPERQLAIKLSQ
Ga0310686_1041910402	3300031708	Soil	PTAYRWFALALRKDPENQAVQTDLKKLWGEMTQPERQLAIRLSQ
Ga0307476_100470051	3300031715	Hardwood Forest Soil	PTAYRWFAMALRKDPENQAVQADLQKLWGEMTQPERQLAIRLSQ
Ga0307476_100598135	3300031715	Hardwood Forest Soil	TPRDLPTAYRWFAMALHKQPDNSRLQDDLQKLWSQMTPPERQLAIKLSQ
Ga0307476_103074141	3300031715	Hardwood Forest Soil	LPTAYRWFALALHKQPDNQALQDDLQKLWSRMTQPERQLAIKLSQ
Ga0307476_112835911	3300031715	Hardwood Forest Soil	RDLPTAYRWFALALRKQPDNQPLQENLQRLWAQMTQPERQLAVKLSQ
Ga0307478_112273302	3300031823	Hardwood Forest Soil	LPTAYRWFALALRKDPDNMAVQTDLQKLWGEMTQPERQLAIKMSQ
Ga0306921_111697612	3300031912	Soil	PTAYRWFAIALRKDPENTSVQADLSKLWSEMTQPERQLAIKLTQ
Ga0307479_103833981	3300031962	Hardwood Forest Soil	AYRWFAMALRKDPNNQSVQADLQKLWSEMTQPERQLAIKLSQ
Ga0307470_103702881	3300032174	Hardwood Forest Soil	YRWFALALHKQPDNQALQDDLQKLWSRMTQPERQLAIKLSQ
Ga0335085_122567801	3300032770	Soil	RWFAQALHKDPENEAIQQDLQKLWGEMTQPERQLAIKLSQ
Ga0335079_101797231	3300032783	Soil	RWFAKALHKEPDNQSVQNDLQKLWGEMTQPERQLAIRLSQ
Ga0335078_104181923	3300032805	Soil	AKALHKEPDNQSVQNDLQKLWGEMTQPERQLAIRLSQ
Ga0335080_111512621	3300032828	Soil	TPHDLPSAYRWFALALRKDPGNQAIQTDLQKLWGEMTQPERQLAIKLTQ
Ga0370515_0167133_808_939	3300034163	Untreated Peat Soil	TAYRWFALALHKEPENQALQDDLQKLWSQMTQPERQLAIKLSQ
Ga0370515_0427219_1_111	3300034163	Untreated Peat Soil	LALHKEPDNQTLQDDLQQLWSQMTPPERQLAIKLSQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056011

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences