Metagenome Family F055938

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055938
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	63 residues
Representative Sequence	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKDVSQGIFPGSILITLQDADPDFAYLESDTKIFVE
Number of Associated Samples	97
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.12 %
% of genes near scaffold ends (potentially truncated)	24.64 %
% of genes from short scaffolds (< 2000 bps)	84.78 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.072 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.464 % of family members)
Environment Ontology (ENVO)	Unclassified (34.058 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.971 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.26% β-sheet: 34.78% Coil/Unstructured: 61.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.34.5.2: eIF5a N-terminal domain-like	d1ueba1	1ueb	0.75642
b.34.5.0: automated matches	d3a5zb1	3a5z	0.73418
b.34.5.2: eIF5a N-terminal domain-like	d1bkba1	1bkb	0.73261
b.34.5.0: automated matches	d3hksa1	3hks	0.72462
b.34.5.0: automated matches	d6s8za1	6s8z	0.71227

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF08734	GYD	3.62
PF00005	ABC_tran	3.62
PF12694	cpYpsA	2.90
PF00072	Response_reg	2.17
PF14338	Mrr_N	2.17
PF01872	RibD_C	1.45
PF02653	BPD_transp_2	1.45
PF01526	DDE_Tnp_Tn3	1.45
PF00144	Beta-lactamase	1.45
PF04542	Sigma70_r2	1.45
PF03631	Virul_fac_BrkB	0.72
PF16798	DUF5069	0.72
PF13795	HupE_UreJ_2	0.72
PF13740	ACT_6	0.72
PF00480	ROK	0.72
PF04679	DNA_ligase_A_C	0.72
PF07336	ABATE	0.72
PF02518	HATPase_c	0.72
PF04326	AlbA_2	0.72
PF08501	Shikimate_dh_N	0.72
PF05973	Gp49	0.72
PF00216	Bac_DNA_binding	0.72
PF10518	TAT_signal	0.72
PF05951	Peptidase_M15_2	0.72
PF01471	PG_binding_1	0.72
PF00557	Peptidase_M24	0.72
PF07007	LprI	0.72
PF03050	DDE_Tnp_IS66	0.72
PF00583	Acetyltransf_1	0.72
PF02737	3HCDH_N	0.72
PF05368	NmrA	0.72
PF04471	Mrr_cat	0.72
PF12831	FAD_oxidored	0.72
PF01541	GIY-YIG	0.72
PF04657	DMT_YdcZ	0.72
PF01925	TauE	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	3.62
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.45
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.45
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.45
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.45
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	1.45
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.45
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.45
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.45
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.45
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.45
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.45
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.72
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.72
COG3108	Uncharacterized conserved protein YcbK, DUF882 family	Function unknown [S]	0.72
COG3238	Uncharacterized membrane protein YdcZ, DUF606 family	Function unknown [S]	0.72
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.72
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.72
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.72
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.72
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	0.72
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.72
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	0.72
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.72
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.72
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.72
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.72
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.72
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.72
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
All Organisms	root	All Organisms	44.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
cellular organisms	root	All Organisms → cellular organisms	44.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.20 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.45 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.45 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.72 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.45 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.45 %
Acidobacteria bacterium RBG_16_68_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_68_9	0.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.72 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.72 %
Parvularculales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.45 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.72 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.72 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.72 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Parvularculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae	0.72 %
Acidobacteria bacterium RBG_16_68_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_68_9	0.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	0.72 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.72 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.72 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.72 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.72 %
Parvularcula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula	0.72 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.72 %
Acidobacteria bacterium RBG_16_68_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_68_9	0.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
unclassified Parvularcula	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula	0.72 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.72 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.72 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.72 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.72 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.72 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.72 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Acidobacteria bacterium RBG_16_68_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_68_9	0.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.72 %
Parvularcula sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula → Parvularcula sp.	0.72 %
Ensifer adhaerens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer adhaerens	0.72 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.72 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.72 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.72 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.72 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Acidobacteria bacterium RBG_16_68_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_68_9	0.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.07 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.72 %
Parvularcula sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula → Parvularcula sp.	0.72 %
Ensifer adhaerens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer adhaerens	0.72 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.72 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.72 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.72 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.72 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Acidobacteria bacterium RBG_16_68_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_68_9	0.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01B9C33	Not Available	571	Open in IMG/M
3300001867\|JGI12627J18819_10283539	Not Available	666	Open in IMG/M
3300001867\|JGI12627J18819_10437004	Not Available	534	Open in IMG/M
3300002906\|JGI25614J43888_10003866	Not Available	4732	Open in IMG/M
3300002906\|JGI25614J43888_10019086	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300002906\|JGI25614J43888_10019234	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300002910\|JGI25615J43890_1008023	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300002917\|JGI25616J43925_10009128	All Organisms → cellular organisms → Bacteria	4331	Open in IMG/M
3300004633\|Ga0066395_10654405	Not Available	620	Open in IMG/M
3300004635\|Ga0062388_102259545	Not Available	567	Open in IMG/M
3300005332\|Ga0066388_101038096	Not Available	1379	Open in IMG/M
3300005332\|Ga0066388_101183190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300005332\|Ga0066388_102357289	Not Available	964	Open in IMG/M
3300005434\|Ga0070709_10237818	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300005434\|Ga0070709_10240549	Not Available	1300	Open in IMG/M
3300005435\|Ga0070714_100202210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1818	Open in IMG/M
3300005467\|Ga0070706_100890356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	822	Open in IMG/M
3300005467\|Ga0070706_101532494	Not Available	609	Open in IMG/M
3300005536\|Ga0070697_101336776	Not Available	639	Open in IMG/M
3300005602\|Ga0070762_10280745	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005921\|Ga0070766_10604463	Not Available	737	Open in IMG/M
3300006028\|Ga0070717_10181033	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300006059\|Ga0075017_100975674	Not Available	659	Open in IMG/M
3300006175\|Ga0070712_100282367	Not Available	1338	Open in IMG/M
3300006175\|Ga0070712_100305943	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300006176\|Ga0070765_100387280	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300006893\|Ga0073928_10218401	Not Available	1479	Open in IMG/M
3300009826\|Ga0123355_10760991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300010043\|Ga0126380_10326678	Not Available	1105	Open in IMG/M
3300010048\|Ga0126373_10417477	Not Available	1370	Open in IMG/M
3300010048\|Ga0126373_11954749	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300010360\|Ga0126372_11789581	Not Available	657	Open in IMG/M
3300010361\|Ga0126378_11645377	Not Available	729	Open in IMG/M
3300010366\|Ga0126379_12612749	Not Available	603	Open in IMG/M
3300010376\|Ga0126381_103512584	Not Available	615	Open in IMG/M
3300010376\|Ga0126381_104760711	Not Available	522	Open in IMG/M
3300010937\|Ga0137776_1346916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1008	Open in IMG/M
3300011411\|Ga0153933_1000720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10821	Open in IMG/M
3300012181\|Ga0153922_1153008	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012203\|Ga0137399_10867385	Not Available	760	Open in IMG/M
3300012361\|Ga0137360_11315256	Not Available	624	Open in IMG/M
3300016270\|Ga0182036_10635384	Not Available	859	Open in IMG/M
3300016294\|Ga0182041_10702517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	897	Open in IMG/M
3300016294\|Ga0182041_11645009	Not Available	593	Open in IMG/M
3300016319\|Ga0182033_10618499	Not Available	942	Open in IMG/M
3300016341\|Ga0182035_11235705	Not Available	668	Open in IMG/M
3300016371\|Ga0182034_10572378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	950	Open in IMG/M
3300016404\|Ga0182037_10220686	Not Available	1483	Open in IMG/M
3300016404\|Ga0182037_11164802	Not Available	676	Open in IMG/M
3300016445\|Ga0182038_12086263	Not Available	514	Open in IMG/M
3300020579\|Ga0210407_10121927	Not Available	1995	Open in IMG/M
3300020580\|Ga0210403_10235126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1504	Open in IMG/M
3300020583\|Ga0210401_10356914	Not Available	1323	Open in IMG/M
3300021168\|Ga0210406_10062782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_68_9	3217	Open in IMG/M
3300021168\|Ga0210406_10272775	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300021168\|Ga0210406_10732880	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300021168\|Ga0210406_11270339	Not Available	532	Open in IMG/M
3300021170\|Ga0210400_10530909	Not Available	971	Open in IMG/M
3300021171\|Ga0210405_10021630	All Organisms → cellular organisms → Bacteria	5217	Open in IMG/M
3300021171\|Ga0210405_10031641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	4237	Open in IMG/M
3300021171\|Ga0210405_10075515	All Organisms → cellular organisms → Bacteria	2655	Open in IMG/M
3300021178\|Ga0210408_10166287	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300021181\|Ga0210388_11322166	Not Available	608	Open in IMG/M
3300021358\|Ga0213873_10056285	Not Available	1054	Open in IMG/M
3300021358\|Ga0213873_10131133	Not Available	742	Open in IMG/M
3300021361\|Ga0213872_10160466	All Organisms → cellular organisms → Bacteria → Proteobacteria	978	Open in IMG/M
3300021361\|Ga0213872_10283437	Not Available	691	Open in IMG/M
3300021372\|Ga0213877_10011632	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300021377\|Ga0213874_10038878	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300021401\|Ga0210393_10866048	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300021407\|Ga0210383_10717101	Not Available	859	Open in IMG/M
3300021420\|Ga0210394_10207856	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300021439\|Ga0213879_10043243	Not Available	1172	Open in IMG/M
3300021439\|Ga0213879_10143982	Not Available	689	Open in IMG/M
3300021439\|Ga0213879_10209269	Not Available	582	Open in IMG/M
3300021441\|Ga0213871_10058598	Not Available	1068	Open in IMG/M
3300021441\|Ga0213871_10208832	Not Available	611	Open in IMG/M
3300021444\|Ga0213878_10010149	Not Available	3338	Open in IMG/M
3300021444\|Ga0213878_10037610	All Organisms → cellular organisms → Bacteria → Proteobacteria	1856	Open in IMG/M
3300021477\|Ga0210398_10239802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1477	Open in IMG/M
3300021477\|Ga0210398_10585204	Not Available	907	Open in IMG/M
3300021479\|Ga0210410_10056362	All Organisms → cellular organisms → Bacteria	3427	Open in IMG/M
3300021479\|Ga0210410_11560766	Not Available	553	Open in IMG/M
3300021559\|Ga0210409_10460804	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300021559\|Ga0210409_11174988	Not Available	643	Open in IMG/M
3300021560\|Ga0126371_10400226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1514	Open in IMG/M
3300021560\|Ga0126371_11151476	Not Available	914	Open in IMG/M
3300022557\|Ga0212123_10006554	All Organisms → cellular organisms → Bacteria	19292	Open in IMG/M
3300022557\|Ga0212123_10224709	Not Available	1369	Open in IMG/M
3300025898\|Ga0207692_11001134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer adhaerens	552	Open in IMG/M
3300025928\|Ga0207700_10485425	Not Available	1092	Open in IMG/M
3300025928\|Ga0207700_10959929	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300025939\|Ga0207665_10651154	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300026304\|Ga0209240_1028199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula → Parvularcula sp.	2145	Open in IMG/M
3300026319\|Ga0209647_1012987	All Organisms → cellular organisms → Bacteria	5490	Open in IMG/M
3300026674\|Ga0207924_100646	Not Available	611	Open in IMG/M
3300027034\|Ga0209730_1021040	Not Available	701	Open in IMG/M
3300027502\|Ga0209622_1008922	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300027609\|Ga0209221_1001607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	5808	Open in IMG/M
3300027727\|Ga0209328_10162611	Not Available	677	Open in IMG/M
3300027874\|Ga0209465_10432400	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300028906\|Ga0308309_10881792	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	777	Open in IMG/M
3300031122\|Ga0170822_12787388	Not Available	522	Open in IMG/M
3300031573\|Ga0310915_11073503	Not Available	560	Open in IMG/M
3300031715\|Ga0307476_10115494	Not Available	1907	Open in IMG/M
3300031715\|Ga0307476_10134033	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300031715\|Ga0307476_10600240	Not Available	816	Open in IMG/M
3300031718\|Ga0307474_10025939	All Organisms → cellular organisms → Bacteria	4279	Open in IMG/M
3300031719\|Ga0306917_10124170	Not Available	1885	Open in IMG/M
3300031719\|Ga0306917_10961035	Not Available	668	Open in IMG/M
3300031753\|Ga0307477_10029660	All Organisms → cellular organisms → Bacteria	3744	Open in IMG/M
3300031753\|Ga0307477_10045117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3029	Open in IMG/M
3300031753\|Ga0307477_10964784	Not Available	560	Open in IMG/M
3300031754\|Ga0307475_10235188	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300031768\|Ga0318509_10851508	Not Available	504	Open in IMG/M
3300031823\|Ga0307478_10460421	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300031890\|Ga0306925_10026959	All Organisms → cellular organisms → Bacteria	5818	Open in IMG/M
3300031890\|Ga0306925_11035987	Not Available	834	Open in IMG/M
3300031890\|Ga0306925_12281639	Not Available	501	Open in IMG/M
3300031910\|Ga0306923_11615791	Not Available	673	Open in IMG/M
3300031912\|Ga0306921_11004963	Not Available	941	Open in IMG/M
3300031912\|Ga0306921_11016583	Not Available	934	Open in IMG/M
3300031941\|Ga0310912_10169984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1655	Open in IMG/M
3300031942\|Ga0310916_10522470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1011	Open in IMG/M
3300031945\|Ga0310913_10123993	Not Available	1766	Open in IMG/M
3300031945\|Ga0310913_10462632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300031947\|Ga0310909_10655905	All Organisms → cellular organisms → Archaea	874	Open in IMG/M
3300031947\|Ga0310909_10977002	Not Available	692	Open in IMG/M
3300031954\|Ga0306926_10450048	Not Available	1586	Open in IMG/M
3300031954\|Ga0306926_12949691	Not Available	509	Open in IMG/M
3300031962\|Ga0307479_10120252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2561	Open in IMG/M
3300031962\|Ga0307479_11769013	Not Available	570	Open in IMG/M
3300032001\|Ga0306922_10507811	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300032008\|Ga0318562_10768660	Not Available	552	Open in IMG/M
3300032076\|Ga0306924_11048131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	892	Open in IMG/M
3300032160\|Ga0311301_11944571	Not Available	690	Open in IMG/M
3300032261\|Ga0306920_103993387	Not Available	536	Open in IMG/M
3300032898\|Ga0335072_10360322	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1586	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.75%
Host-Associated	Host-Associated	7.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.41%
Plants	Host-Associated → Plants	5.07%
Aquatic	Environmental → Aquatic	4.35%
Fungi	Host-Associated → Fungi	1.45%
Arthropoda	Host-Associated → Arthropoda	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.90%
Mycelium	Host-Associated → Fungi → Mycelium	1.45%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Sediment	Environmental → Aquatic → Sediment	0.72%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	21.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.90%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.72%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.17%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.72%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.07%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.90%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.45%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.72%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026674	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN356 (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_3391040	2040502001	Soil	VRADELQPGDRVQDTKGNIVTIKEVSPGIFPNSILITLQDADPDFLYLESDTKVFVE
JGI12627J18819_102835392	3300001867	Forest Soil	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKEVSPGIFPDSILIILQDADPDFLYLESDTKVYVE*
JGI12627J18819_104370041	3300001867	Forest Soil	MNKRQKWVRADKLQPGDRVQDTKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFVE*
JGI25614J43888_100038663	3300002906	Grasslands Soil	MNKRRTWVRAEKLQPGDRVRDTKGNIVTIKDVNKGIFPGSILITLQDAEPDFAYLESGTKIFVE*
JGI25614J43888_100190862	3300002906	Grasslands Soil	MNKRQTWVRADKLQPGDRVQDANGNVVTIKDVSKGLFTGSILITLQDADPDFAYLESDTKIFVE*
JGI25614J43888_100192344	3300002906	Grasslands Soil	MNKRQTWVRADKLRPGDRVQDANGNVVAIKDVSKGLFPGSILITLQDADPDFAYLESDTKIFVE*
JGI25615J43890_10080232	3300002910	Grasslands Soil	MNKRQTWVRADKLQPGDRVQDANGNVVTIKDVSKGLFPGSILITLQDADPDFAYLESDTKIFVE*
JGI25616J43925_100091284	3300002917	Grasslands Soil	MNKRQTWVRADKLQPGDRVQDANGNVVTIKDVSKGLFXGSILITLQDADPDFAYLESDTKIFVE*
Ga0066395_106544052	3300004633	Tropical Forest Soil	VRADKLQPGDRIQDTNGNIVTIKAATKGIFPGSILITLEDADPDFVYLEPDTKIFVE*
Ga0062388_1022595451	3300004635	Bog Forest Soil	MNKRQTWVRADKLQPGDRVQDANGNIVTIKDVNKGLWPGSILITLRDASPDFAYLESDTKIFVE*
Ga0066388_1010380962	3300005332	Tropical Forest Soil	MNKRRKWVRADKLQPGDRVQDANGNIVTIKDVSKGLFPRSIRITLQDADPDFAYFESDTKIFVE*
Ga0066388_1011831902	3300005332	Tropical Forest Soil	MNKHQKWVRADKLQPGDQVQDAKGNIVTIKEVSQGIFPDSILITLQDADPDFVYLESDTKVFVE*
Ga0066388_1023572892	3300005332	Tropical Forest Soil	MNKRQTWVRADKLQPGDRIQDTNGNIVTIKAATKGIFPGSILITLEDADPDFVYLEPDTKIFVE*
Ga0070709_102378181	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNKRQKWVRVDKLQPGDRVQDAKGNIVTIKEASPGIFPDSILITLQDADPDFLYLESDTKVFVE*
Ga0070709_102405492	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VGKSGQATAGDRVQDAKGNIVTIKEVSPGIFPDSILITLQDADPDFLYLESDTKVFVE*
Ga0070714_1002022103	3300005435	Agricultural Soil	VRADELQPGDRVQDAKGNIVTIKEVSPGIFPNSILITLQDADPDFLYLESDTKVFVE*
Ga0070706_1008903561	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	METMQSSLIALRERMNKRQTWVRADKLQPGDRVQDTNGNIVTIKDVNKGLWPGSILITLRDASPDFAYLESDTKIFVE*
Ga0070706_1015324941	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VRADKLQPGDRVQDANGNAVTIKDVSKGLFPGSILITLQDADPDFAYLESDTKIFVE*
Ga0070697_1013367762	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	METMQSSLIALRERMNKRQTWVRADKLQPGDRVQDTNGNIVTLKDVNKGLWPGSILITLRDASPDFAYLESDTKIFV
Ga0070762_102807452	3300005602	Soil	MNKKQKWVRADKLQPGDRVQDAKGNIVTIKDVSQGIFPGSILITLQDANPDFLYLESDTKVFVE*
Ga0070766_106044633	3300005921	Soil	MNKRQTWVRADRLQPGDRVQDANGNIVTIKEVNKGLWPGSILITLQDASPDFAYLESDTKIFVE*
Ga0070717_101810332	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFVE*
Ga0075017_1009756742	3300006059	Watersheds	MNKRQTWVRADKLQPGDRVQDANGNIVTIKDVNKGLWPGSILITLRDASPDFAYLESDTRIFVE*
Ga0070712_1002823673	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DKLQPGDRVQDAKGNIVTIKEASPGIFPDSILITLQDADPDFLYLESDTKVFVE*
Ga0070712_1003059432	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VRADKLQPGDRVQDAKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFVE*
Ga0070765_1003872802	3300006176	Soil	MNKRQTWVRADKLQPGDRVQDAKGNIVTIKDVNKGLWPGSILITLQDASPDFAYLESDTKIFVE*
Ga0073928_102184011	3300006893	Iron-Sulfur Acid Spring	MNKRQKWVRADKLEPGDRVQDANGNVVTIKDVSEGLFPGSILIILQEADPDFAYLECDTKIFVE*
Ga0123355_107609911	3300009826	Termite Gut	MNKRQKWVRADKLQRGDQVQDAKGNIVTIKEVSQGIFPGSILITLQDADPDFVYLESDTKVFVE*
Ga0126380_103266782	3300010043	Tropical Forest Soil	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKEVSPGIFPDSILVTLQDADPDFLYLESDTKVFVE*
Ga0126373_104174772	3300010048	Tropical Forest Soil	MNERQSWVRADKLQPGDRVQDTNGNIVTIKDVNKGIWPGSILITLRDANPDFVYVESDTRIFVE*
Ga0126373_119547492	3300010048	Tropical Forest Soil	VRADKLQPGDRVQDAKGNIVTIKEVSPGIFPDSILVTLQDADPDFLYLESDTKVFVE*
Ga0126372_117895812	3300010360	Tropical Forest Soil	MNKRKTWVKAEKLQPGDRVQDTNGNIVVIKDVSKGLFPSSILITLQDANPDFVYVECGTKIFVE*
Ga0126378_116453771	3300010361	Tropical Forest Soil	MNKRQTWVRADKLQPGDRIQDTNGNIVTIKAATKGIFPGSILITLEDADPDFVYLEPDTK
Ga0126379_126127492	3300010366	Tropical Forest Soil	MNKHQKWVRADKLQPGDQVQDAKGNIVTIKEVSQGIFPDSILITLQNADPDFVYLESDTKVFVE*
Ga0126381_1035125841	3300010376	Tropical Forest Soil	MNKRRTWVRADKLQPGDQVKDTNGNIVIIKDVNQGIFPGSILITLQDADPDFAYLESGTKIFVE
Ga0126381_1047607111	3300010376	Tropical Forest Soil	DESLSREMNKRQTWVRADKLQPGDRIQDTNGNIVTIKAATKGIFPGSILITLEDADPDFVYLEPDTKIFVE*
Ga0137776_13469162	3300010937	Sediment	MNKRRTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPRSILITFEDANPDFVYLEPDTKIFVE*
Ga0153933_10007205	3300011411	Attine Ant Fungus Gardens	MNKRQTWVRADKLQPGDRVQDAKGNTVTIKDVSQGIFPGSILVILQDVDPDFLYLESDTKVFVE*
Ga0153922_11530081	3300012181	Attine Ant Fungus Gardens	RTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPRSILITFEDANPDFVYLEPDTKIFVE
Ga0137399_108673851	3300012203	Vadose Zone Soil	KRQMWVRADKLQPGDRVQDTNGNIVTIKDVNKGLWPGSILITLRDASPDFAYLESDTKIFVE*
Ga0137360_113152561	3300012361	Vadose Zone Soil	MNKRQTWVRADKLQPGDRVQDANGNVVTIKDVSKGLFPGSILITLQDADPDFAYLESDKKIFVE*
Ga0182036_106353842	3300016270	Soil	MNKRRTWVRADKLQPGDRVKDTKGNIVTIKDVNKGIFPGSILITLHDADPDFAYLESGTKIFVE
Ga0182041_107025171	3300016294	Soil	MLAGDNERPPLPDSVQMNKRQTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITLEDADPDFAYLEPDTKI
Ga0182041_116450091	3300016294	Soil	MKAPSREMNKRQTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITSEDADPDFVYLEPDTKIFVE
Ga0182033_106184991	3300016319	Soil	MNKRQTWVRADKLQPGDRIQDTNGNIVTIKEVTKGIFPGSILITLEDADPDFVYLEPDTKIFVE
Ga0182035_112357051	3300016341	Soil	MNKRQKWVRADKLQPGGRVQDAKGNIVIIKDVSQGIFPGSILITLQDADPDFAYLESDTKIFVE
Ga0182034_105723782	3300016371	Soil	MLAGDNERPPLPDSVQMNKRQTWVRADKLQPGDRIQDTNGNIVTIREATTGIFPGSILITLEDADPDFVYLEPDTKIFVE
Ga0182037_102206862	3300016404	Soil	MNKRQSWVRADKLQPGDRVQDTNGNIVTIKDVNKGIWPGSILITLRDANPDFVYVESDTRIFVE
Ga0182037_111648022	3300016404	Soil	MNKRQTWVRADKLQPGDRIQDTNGNIVTIKAATKGIFPGSILITLEDANPDFVYLEPETKIFLE
Ga0182038_120862632	3300016445	Soil	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKDVSQGIFPGSILITLQDADPDFAYLESDTKIFVE
Ga0210407_101219272	3300020579	Soil	VRADELQPGDRVQDAKGNIVTIKEVSPGIFPNSILITLQDADPDFLYLESDTKVFVE
Ga0210403_102351262	3300020580	Soil	MNKRQTWVRADRLQPGDRVQDANGKIVTIKDVNKGLWPGSILITLQDASPDFAYLESDTKIFVE
Ga0210401_103569142	3300020583	Soil	VRVDKLQPGDRVQDAKGNIVTIKEASPGIFPDSIPITLQDADPDFLYLESDTKVFVE
Ga0210406_100627823	3300021168	Soil	MNKRQKWVRADKLQQGDRVQDAKGNIVTIKDVSQGIFPGSILITLQDADPDFLYLESDTKVFVE
Ga0210406_102727751	3300021168	Soil	KPMNKRQKWVRADKLQPGDRVQDAKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFVE
Ga0210406_107328802	3300021168	Soil	MNKKQKWVRADKLQPGDRVQDAKGNIVTIKDVSQGIFPGSILITLQDANPDFLYLESDTKVFVE
Ga0210406_112703392	3300021168	Soil	MNKRQTWVRADRLQPGDRVQDANGNIVTIKEVNKGLWPGSILITLQDANPDFAYLESDTKIFVE
Ga0210400_105309091	3300021170	Soil	MNKRRTWVRAEKLQPGDRVRDTKGNIVTIKGVNKGIFPGSILITLQDAEPDFAYLESGTKIFVE
Ga0210405_100216305	3300021171	Soil	VRADELQAGDWVQDAKGNIVTIKEVSPGIFPNSILITLQDADPDFLYLESDTKVFVE
Ga0210405_100316413	3300021171	Soil	MNKRQKWVRVDKLQPGDRVQDAKGNIVTIKEASPGIFPDSIPITLQDADPDFLYLESDTKVFVE
Ga0210405_100755152	3300021171	Soil	MNKRQKWVRADKLQPGDRVQDTKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFVE
Ga0210408_101662873	3300021178	Soil	MNKRQTWVRADRLQPGDRVQDACGNVVTIKDVSEGLFPGSILITLQDADPDFAYLECDTKIFVE
Ga0210388_113221662	3300021181	Soil	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKEVSPGIFPNSILITLQDADPDFLYLESDTKVFVE
Ga0213873_100562852	3300021358	Rhizosphere	MNKRRNWVRADKLQPGDRVQDANGNNVTIKDVSKGVFPGSILITLQDAVPDFAYLESDTKIFVE
Ga0213873_101311331	3300021358	Rhizosphere	MNKKQTWVRADKLQPGDRIQDANGNIVTIKEATKGIFPGSILITLKDADPDFVYLEPDTKIFVE
Ga0213872_101604662	3300021361	Rhizosphere	MNKRRKWVRADKLQPGDWIQDAKGNIVTIKEVSKEVFPGSILITLQDADPDFAYLESDTKIFVE
Ga0213872_102834372	3300021361	Rhizosphere	QRVTNARRRPRDRMNKRRKWVKADKLQPGDRIQDANGNIVTIKDVSKGVFPGSILITLQEADPDFAYLESDTKIFVE
Ga0213877_100116322	3300021372	Bulk Soil	MNKRRKWVKADKLQPGDRIQDAKGNIVTIKDVSKGVFPGSILIRLQDADPDFGYLESDTKIFVE
Ga0213874_100388782	3300021377	Plant Roots	MNKRQKWVRADKLQAGDRVQDAKGNIVTIKEVSPGIFPGSILITLQNTDPDFVYLESDTKVFVE
Ga0210393_108660481	3300021401	Soil	KRQKWVRADKLQPGDRVQDAKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFVE
Ga0210383_107171011	3300021407	Soil	RQKWVRADELQPGDRVQDAKGNIVTIKEVSPGIFPNSILITLQDADPDFLYLESDTKVFV
Ga0210394_102078563	3300021420	Soil	MNKRQTWVRADKLQPGDRVQDAKGNIVTIKDVNKGLWPGSILITLQDASPDFAYLESDTKIFVE
Ga0213879_100432432	3300021439	Bulk Soil	MNKRRKWVKADKLQPGDRIQDAKGNIVTIKDVSKEVFPGSILITLQDADPDFAYLESDTKILVE
Ga0213879_101439822	3300021439	Bulk Soil	SPKTTRMNKRRKWVTADKLQPGDRVQDANGNIVTIKDVSKGVFPGSILITLQDADPDFAYLECDTKIFVE
Ga0213879_102092691	3300021439	Bulk Soil	MNKRRTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITLEDADPDFVYLEPDTKIFVE
Ga0213871_100585982	3300021441	Rhizosphere	VRADKLQPGDRVQDANGNNVTIKDVSKGVFPGSILITLQDAVPDFAYLESDTKIFVE
Ga0213871_102088321	3300021441	Rhizosphere	MNKRKTWVRADKLQPGDRIQDAKGNIVTIEVVSKGIFPGSILITLQDADPDFAYLESDTKVFLE
Ga0213878_100101498	3300021444	Bulk Soil	MNKRRKWVRADKLQPGDRIQDAKGNIVTIKDVSKGVFPGSILITLQDADPDFAYLESDTKIFVE
Ga0213878_100376103	3300021444	Bulk Soil	MLAEGSRERVNKRRKWVRADRLQPGDRVQDVNGNIVTIKDASKGVFLGSILITLQDADPDFAYLESDTKIFVE
Ga0210398_102398023	3300021477	Soil	QAGDWVQDAKGNIVTIKEVSPGIFPNSILITLQDADPDFLYLESDTKVFVE
Ga0210398_105852042	3300021477	Soil	VGKSGQATAGDRVQDAKGNIVTIKEVSPGIFPYSILITLQDADPDFLYLESDTKVFVE
Ga0210410_100563626	3300021479	Soil	VRPEELQPGDRVQDAKGNIVTIKEVSPGIFPNSILITQDADPDFLYLESDTKVFVE
Ga0210410_115607661	3300021479	Soil	MNKRQTWVRADKLQPGDRVQDAKGNIVTIKDVNKGLWPGSILITLQDASPDFAYLESDTKIFV
Ga0210409_104608043	3300021559	Soil	VRADKLQPGDRVQDAKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFVE
Ga0210409_111749881	3300021559	Soil	MNKRRTWVRAEKLQPGDRVRDTKGNIVTIKDVNKGIFPGSILITLQDAEPDFAYLESGTKIFVE
Ga0126371_104002262	3300021560	Tropical Forest Soil	MNKHQKWVRADKLQPGDQVQDAKGNIVTIKEVSQGIFPDSILITLQDADPDFVYLESDTKVFVE
Ga0126371_111514762	3300021560	Tropical Forest Soil	MNKRQTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITLEDADPDFVYLEPDTKIFVE
Ga0212123_100065546	3300022557	Iron-Sulfur Acid Spring	MNKRQTWVRADKLQPGDRVQDANGNVVTIKDVSKGLFPGSILITLQDADPDFAYLESDTKIFVE
Ga0212123_102247092	3300022557	Iron-Sulfur Acid Spring	MNKRQTWVRADRLQPGDRVQDANGNIVTIKEVNKGLWPGSILITLQDASPDFAYLESDTKIFVE
Ga0207692_110011342	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NKRQKWVRADKLQPGDRVQDTKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFVE
Ga0207700_104854252	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VRADKLQPGDRVQDAKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFV
Ga0207700_109599291	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	KLQPGDRVQDTKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFVE
Ga0207665_106511542	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VRADKLQPGDRLQDTKGNIVTIKDVSPGIFPDSILVTLQDANPDFLYLESDTNVFVE
Ga0209240_10281993	3300026304	Grasslands Soil	MNKRQTWVRADKLRPGDRVQDANGNVVAIKDVSKGLFPGSILITLQDADPDFAYLESDTKIFVE
Ga0209647_10129875	3300026319	Grasslands Soil	MNKRQTWVRADKLQPGDRVQDANGNVVTIKDVSKGLFTGSILITLQDADPDFAYLESDTKIFVE
Ga0207924_1006462	3300026674	Soil	KWVRVDKLQPGDRVQDAKGNIVTIKEASPGIFPDSILITLQDADPDFLYLESDTKVFVE
Ga0209730_10210402	3300027034	Forest Soil	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKDVSPGIFPGSILITLQDADPDFLYLESDTKVFVE
Ga0209622_10089223	3300027502	Forest Soil	VRADKLQRGDRVQDAKGNIVTIKDVSQGIFPGSILITLEDADPDFLYLESDTKVFVE
Ga0209221_10016073	3300027609	Forest Soil	MNKRQKWVRADKLEPGDRVQDANGNVVTIKDVSEGLFPGSILIILQEADPDFAYLECDTKIFVE
Ga0209328_101626112	3300027727	Forest Soil	PGDRVQDANGNIVTIKEVNKGLWPGSILITLQDASPDFAYLESDTKIFVE
Ga0209465_104324002	3300027874	Tropical Forest Soil	MNKRQTWVRADKLQPGDRIQDTNGNIVTIKAATKGIFPGSILITLEDADPDFVYLEPDTKIFVE
Ga0308309_108817922	3300028906	Soil	MNKRQTWVRADKLQPGDRVQDAKGNIVTIKEVNKGLWPGSILITLQDASPDFAYLESDTRIFVE
Ga0170822_127873881	3300031122	Forest Soil	MNKRRKWVRAEKLQPGDRVRDTKGNIVTIKDVNKGIFPGSILITLQDAEPDFAYLESGTKIFVE
Ga0310915_110735031	3300031573	Soil	MNKRQSWVRADKLQPGDRVQDTNGNIVTIKDVNNGIWPGSILITLRDANPDFVYVESDTRIFVE
Ga0307476_101154942	3300031715	Hardwood Forest Soil	MNKRQKWVRADQLEPGDRVQDANGNVVTIKDVSEGLFPGSILITLQNADPDFAYLECDTKIFVE
Ga0307476_101340332	3300031715	Hardwood Forest Soil	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKDVSQGIFPGSILITLQDADPDFLYLESDTKVFVE
Ga0307476_106002402	3300031715	Hardwood Forest Soil	WPGDRVQDTKGNIVTIKDVSQGIFPGSILITLQDADPDFLYLESDMKVFVE
Ga0307474_100259392	3300031718	Hardwood Forest Soil	VDEGGPGDRVQDTKGNIVTIKDVSQGIFPGSILITLQDADPDFLYLESDMKVFVE
Ga0306917_101241702	3300031719	Soil	MNKRKTWVRADKLRPGDRVQDTSGNIVVIKDVSKGLFPGSILITLQNANPDFVHVESGTRIFVE
Ga0306917_109610352	3300031719	Soil	QPGDRVQDAKGNIVIIKDVSQGIFPGSILITLQDADPDFAYLESDTKIFVE
Ga0307477_100296607	3300031753	Hardwood Forest Soil	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKEVSPGIFPDSILITLQDADPDFLYLESDTKVFVE
Ga0307477_100451172	3300031753	Hardwood Forest Soil	MNKRQKWVRADKLQPGDRVQDANGNVVTIKDVSEGLFPGSILITLQDADPDFAYLECDTKIFVE
Ga0307477_109647842	3300031753	Hardwood Forest Soil	MNKKQKWVRADKLQPGDRVQDAKGNIVTIKEVSPGIFPDSILITLRDADPDFLYLESDTKVFVE
Ga0307475_102351882	3300031754	Hardwood Forest Soil	MNKRQKWVRADKLQPGDRVQDAKGNIVTTKDVSQGIFPGPILITLQDADPDFLYLEADMKVFVE
Ga0318509_108515081	3300031768	Soil	VMNKRKTWVRADKLRPGDRVQDTSGNIVVIKDVSKGLFPGSILITLQNANPDFVHVESGTRIFVE
Ga0307478_104604213	3300031823	Hardwood Forest Soil	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKDVSQGIFPGSILITLQDADPDFLYLESDMKVFVE
Ga0306925_100269593	3300031890	Soil	MNKRQSWVRADKLQPGDRVQDTNGNIVTIKDVNNGIWPGSILIRLRDANPDFVYVESDTRIFVE
Ga0306925_110359872	3300031890	Soil	MNERQRWVRADKLQPGDRVQDTNGNIVTIKDVNKGIWPGSILITLRDANPDFVYVESDTRIFVE
Ga0306925_122816391	3300031890	Soil	PLPDSVQMNKRQTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITLEDADPDFVYLEPDTKIFVE
Ga0306923_116157912	3300031910	Soil	KRQSWVRADKLQSGDRVQDTKGNIVTIKDVNNGIWPGSILITLRDANPDFVYVESDTRIFVE
Ga0306921_110049631	3300031912	Soil	IESPRRKMNKRQTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITLEDADPDFVYLEPDTKIFVE
Ga0306921_110165831	3300031912	Soil	SGDRVQDTKGNIVTIKDVNNGIWPGSILITLRDANPDFVYVESDTRIFVE
Ga0310912_101699842	3300031941	Soil	MNKRQTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITLEDADPDFAYLEPDTKIFVE
Ga0310916_105224701	3300031942	Soil	MLAGDNERPPLPDSVQMNKRQTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITLEDADPDFVYLEPDTKIFVE
Ga0310913_101239932	3300031945	Soil	VRADKLQPGDRVQDTNGNIVTIKDVNNGIWPGSILITLRDANPDFVYVESDTRIFVE
Ga0310913_104626322	3300031945	Soil	MLAGDNERPPLPDSVQMNKRQTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITLEDADPDFAYLEPDTKIFVE
Ga0310909_106559052	3300031947	Soil	MNKRKTWVRADKLRPGDRVQDTSGNIVVIKDVSKGLFPGSILITLQNANPDFVHVES
Ga0310909_109770021	3300031947	Soil	ADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITLEDADPDFAYLEPDTKIFVE
Ga0306926_104500481	3300031954	Soil	MNERQRWVRADKLQPGDRVQDTNGNIVTIKDVNKGIWPGSILITLRDANPDFVYVESDTRIFV
Ga0306926_129496911	3300031954	Soil	PLNLSRIFRCRKLGKSMNKRQSWVRADKLQSGDRVQDTKGNIVTIKDVNNGIWPGSILITLRDANPDFVYVESDTRIFVE
Ga0307479_101202525	3300031962	Hardwood Forest Soil	MNKRQKWVRADKLQPGDRVQDAKGNIVTIKDVSQGIFPGSILITLQDADPDFLYLESDTK
Ga0307479_117690131	3300031962	Hardwood Forest Soil	MNKKQKWVRADKLQPGDRVQDAKGNIVTIKDVSQGIFPRSILITLQDANPDFLYLESDTKVFVE
Ga0306922_105078113	3300032001	Soil	MKRVCFKLFERDAADSPLNLRRIFRCRKLGKSMNKRQSWVRADKLQPGDRVQDTNGNIVTIKDVNNGIWPGSILITLRDANPDFVYVESDTRIFVE
Ga0318562_107686601	3300032008	Soil	MNKRQKWVRADKLQPRDRVQDANGNIVTIKDVSKGAFPGSILITLQDADPDFAYLECDTKIFVE
Ga0306924_110481311	3300032076	Soil	MLAGDNERPPLPDSVQMNKRQTWVRADKLQPGDRIQDTNGNIVTIKEATKGIFPGSILITLEDADPDFV
Ga0311301_119445711	3300032160	Peatlands Soil	METMQSSLIALRERMNKRQTWVRADRLQPGDRVQDANGNIVTIKDVNKGLWPGSILITLRDASPDFAYLESDTKIFVE
Ga0306920_1039933872	3300032261	Soil	MNKHQKRVRADKLQPGDQVQDAKGNIVTIKEVSQGIFPDSILITLQDADPDFVYLESDTKVFVE
Ga0335072_103603223	3300032898	Soil	MNKHQKWVRADKLQSGHRVQDTKGNIVTIKEVSQGIFPGSILITLQDADPDLIYLESDTKVFVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055938

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences