Metagenome / Metatranscriptome Family F055890

Basic Information
Family ID	F055890
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	45 residues
Representative Sequence	MRFRPANISLINRRHYLPRLLLTLSSIEKDDQRTLTGHYISTS
Number of Associated Samples	111
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.78 %
% of genes near scaffold ends (potentially truncated)	83.33 %
% of genes from short scaffolds (< 2000 bps)	68.12 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Bacteria (81.159 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.188 % of family members)
Environment Ontology (ENVO)	Unclassified (40.580 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.203 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.85% β-sheet: 0.00% Coil/Unstructured: 59.15%
Feature Viewer

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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF02371	Transposase_20	47.83
PF13924	Lipocalin_5	7.25
PF13570	PQQ_3	2.90
PF01548	DEDD_Tnp_IS110	2.17
PF11746	DUF3303	1.45
PF00903	Glyoxalase	1.45
PF01833	TIG	1.45
PF07589	PEP-CTERM	1.45
PF07883	Cupin_2	1.45
PF10083	DUF2321	1.45
PF02321	OEP	0.72
PF13358	DDE_3	0.72
PF00753	Lactamase_B	0.72
PF02518	HATPase_c	0.72
PF02687	FtsX	0.72
PF08240	ADH_N	0.72
PF01527	HTH_Tnp_1	0.72
PF07366	SnoaL	0.72
PF03466	LysR_substrate	0.72
PF00717	Peptidase_S24	0.72
PF04015	DUF362	0.72
PF12543	DUF3738	0.72
PF00654	Voltage_CLC	0.72
PF00144	Beta-lactamase	0.72
PF01619	Pro_dh	0.72
PF01566	Nramp	0.72
PF03448	MgtE_N	0.72
PF00856	SET	0.72
PF12680	SnoaL_2	0.72
PF00196	GerE	0.72
PF07603	DUF1566	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	50.00
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.45
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.72
COG0506	Proline dehydrogenase	Amino acid transport and metabolism [E]	0.72
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.72
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.72
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.72
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	0.72
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.16 %
Unclassified	root	N/A	18.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.16 %
Unclassified	root	N/A	18.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.16 %
Unclassified	root	N/A	18.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.42 %
Unclassified	root	N/A	18.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.45 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	54.35 %
Unclassified	root	N/A	18.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.17 %
Candidatus Eremiobacterota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	53.62 %
Unclassified	root	N/A	18.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
unclassified Candidatus Eremiobacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota	0.72 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	53.62 %
Unclassified	root	N/A	18.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.72 %
Candidatus Eremiobacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota → Candidatus Eremiobacteraeota bacterium	0.72 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.72 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.45 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	1.45 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.72 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.72 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.72 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.72 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.72 %
Dermabacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermabacteraceae	0.72 %
Candidatus Eremiobacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota → Candidatus Eremiobacteraeota bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.45 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1.45 %
Edaphobacter bradus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	0.72 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.72 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	0.72 %
Brachybacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermabacteraceae → Brachybacterium	0.72 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.72 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.72 %
Candidatus Eremiobacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota → Candidatus Eremiobacteraeota bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.17 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.45 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1.45 %
Terriglobus saanensis SP1PR4	strain	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis → Terriglobus saanensis SP1PR4	0.72 %
Brachybacterium fresconis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermabacteraceae → Brachybacterium → Brachybacterium fresconis	0.72 %
Edaphobacter bradus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	0.72 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.72 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.72 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.72 %
Candidatus Eremiobacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota → Candidatus Eremiobacteraeota bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig93343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	618	Open in IMG/M
3300001156\|JGI12706J13280_10152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1036	Open in IMG/M
3300001867\|JGI12627J18819_10028215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2315	Open in IMG/M
3300003152\|Ga0052254_1098019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermabacteraceae → Brachybacterium → Brachybacterium fresconis	619	Open in IMG/M
3300003368\|JGI26340J50214_10030833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1589	Open in IMG/M
3300003370\|JGI26337J50220_1031040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	611	Open in IMG/M
3300005548\|Ga0070665_100736578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300006176\|Ga0070765_100135331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2180	Open in IMG/M
3300006176\|Ga0070765_101691418	Not Available	594	Open in IMG/M
3300009098\|Ga0105245_11376593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	755	Open in IMG/M
3300009174\|Ga0105241_10158782	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300009518\|Ga0116128_1006760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	4259	Open in IMG/M
3300009518\|Ga0116128_1079958	Not Available	986	Open in IMG/M
3300009519\|Ga0116108_1001710	All Organisms → cellular organisms → Bacteria	11084	Open in IMG/M
3300009519\|Ga0116108_1009452	Not Available	3741	Open in IMG/M
3300009519\|Ga0116108_1070844	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300009519\|Ga0116108_1082765	Not Available	983	Open in IMG/M
3300009548\|Ga0116107_1114122	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300009551\|Ga0105238_10269590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1683	Open in IMG/M
3300009634\|Ga0116124_1070072	Not Available	1010	Open in IMG/M
3300009644\|Ga0116121_1036042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1563	Open in IMG/M
3300009646\|Ga0116132_1012977	All Organisms → cellular organisms → Bacteria	3214	Open in IMG/M
3300009760\|Ga0116131_1010440	Not Available	3750	Open in IMG/M
3300009824\|Ga0116219_10016089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4702	Open in IMG/M
3300009839\|Ga0116223_10133362	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300010043\|Ga0126380_11488034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	599	Open in IMG/M
3300010343\|Ga0074044_10027459	All Organisms → cellular organisms → Bacteria	4042	Open in IMG/M
3300012971\|Ga0126369_10840027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1002	Open in IMG/M
3300012987\|Ga0164307_11310017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis → Terriglobus saanensis SP1PR4	606	Open in IMG/M
3300014151\|Ga0181539_1005503	All Organisms → cellular organisms → Bacteria	10206	Open in IMG/M
3300014162\|Ga0181538_10484763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300014167\|Ga0181528_10900982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	500	Open in IMG/M
3300014168\|Ga0181534_10239753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	959	Open in IMG/M
3300014199\|Ga0181535_10005036	All Organisms → cellular organisms → Bacteria	14349	Open in IMG/M
3300014199\|Ga0181535_10186860	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1279	Open in IMG/M
3300014501\|Ga0182024_11755279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	696	Open in IMG/M
3300015264\|Ga0137403_10107295	All Organisms → cellular organisms → Bacteria	2796	Open in IMG/M
3300016404\|Ga0182037_10104604	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300016422\|Ga0182039_12221326	Not Available	506	Open in IMG/M
3300017925\|Ga0187856_1006337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	7454	Open in IMG/M
3300017925\|Ga0187856_1028035	Not Available	2728	Open in IMG/M
3300017925\|Ga0187856_1064496	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300017925\|Ga0187856_1127382	Not Available	981	Open in IMG/M
3300017931\|Ga0187877_1112583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1124	Open in IMG/M
3300017931\|Ga0187877_1369432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	543	Open in IMG/M
3300017935\|Ga0187848_10309711	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300017938\|Ga0187854_10099066	Not Available	1369	Open in IMG/M
3300017940\|Ga0187853_10183790	Not Available	986	Open in IMG/M
3300017946\|Ga0187879_10229002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1038	Open in IMG/M
3300017948\|Ga0187847_10014062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5169	Open in IMG/M
3300018002\|Ga0187868_1015128	Not Available	3865	Open in IMG/M
3300018004\|Ga0187865_1045227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1800	Open in IMG/M
3300018013\|Ga0187873_1131585	Not Available	966	Open in IMG/M
3300018016\|Ga0187880_1146751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1112	Open in IMG/M
3300018020\|Ga0187861_10018228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4311	Open in IMG/M
3300018026\|Ga0187857_10103179	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1386	Open in IMG/M
3300018026\|Ga0187857_10223697	Not Available	872	Open in IMG/M
3300018034\|Ga0187863_10007223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	7520	Open in IMG/M
3300018034\|Ga0187863_10108058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1558	Open in IMG/M
3300018046\|Ga0187851_10250534	Not Available	1038	Open in IMG/M
3300019886\|Ga0193727_1100774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	851	Open in IMG/M
3300020583\|Ga0210401_10062278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3513	Open in IMG/M
3300020583\|Ga0210401_10079702	All Organisms → cellular organisms → Bacteria	3082	Open in IMG/M
3300021171\|Ga0210405_10158467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1793	Open in IMG/M
3300021180\|Ga0210396_10071925	Not Available	3147	Open in IMG/M
3300021180\|Ga0210396_10189584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1839	Open in IMG/M
3300021180\|Ga0210396_10694992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	879	Open in IMG/M
3300021401\|Ga0210393_10014747	Not Available	6054	Open in IMG/M
3300021401\|Ga0210393_10068889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2791	Open in IMG/M
3300021402\|Ga0210385_10331034	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300021403\|Ga0210397_10130120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1737	Open in IMG/M
3300021403\|Ga0210397_10181867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	1491	Open in IMG/M
3300021404\|Ga0210389_10122355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2010	Open in IMG/M
3300021404\|Ga0210389_10509408	Not Available	947	Open in IMG/M
3300021405\|Ga0210387_10475117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1110	Open in IMG/M
3300021406\|Ga0210386_10235335	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300021407\|Ga0210383_10014804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6575	Open in IMG/M
3300021407\|Ga0210383_10183818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1784	Open in IMG/M
3300021420\|Ga0210394_11294446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	623	Open in IMG/M
3300021432\|Ga0210384_10269973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1531	Open in IMG/M
3300021433\|Ga0210391_10185754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1635	Open in IMG/M
3300021433\|Ga0210391_10783772	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	745	Open in IMG/M
3300021474\|Ga0210390_10012866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6805	Open in IMG/M
3300021474\|Ga0210390_10061878	All Organisms → cellular organisms → Bacteria	3085	Open in IMG/M
3300021475\|Ga0210392_10015116	All Organisms → cellular organisms → Bacteria → Proteobacteria	4244	Open in IMG/M
3300021477\|Ga0210398_10012462	Not Available	7463	Open in IMG/M
3300021477\|Ga0210398_10075900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2731	Open in IMG/M
3300021478\|Ga0210402_10037864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota → Candidatus Eremiobacteraeota bacterium	4191	Open in IMG/M
3300022593\|Ga0236338_1019431	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300025412\|Ga0208194_1017367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1160	Open in IMG/M
3300025419\|Ga0208036_1024465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1189	Open in IMG/M
3300025442\|Ga0208034_1042156	Not Available	1002	Open in IMG/M
3300025446\|Ga0208038_1000805	All Organisms → cellular organisms → Bacteria	20713	Open in IMG/M
3300025446\|Ga0208038_1021202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1562	Open in IMG/M
3300025446\|Ga0208038_1038863	Not Available	975	Open in IMG/M
3300025473\|Ga0208190_1016435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1772	Open in IMG/M
3300025477\|Ga0208192_1027000	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300025480\|Ga0208688_1070866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	709	Open in IMG/M
3300025500\|Ga0208686_1055594	Not Available	913	Open in IMG/M
3300025911\|Ga0207654_10017553	All Organisms → cellular organisms → Bacteria → Acidobacteria	3744	Open in IMG/M
3300026942\|Ga0207783_1003443	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300027330\|Ga0207777_1011124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1884	Open in IMG/M
3300027371\|Ga0209418_1083533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	573	Open in IMG/M
3300027497\|Ga0208199_1060010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	806	Open in IMG/M
3300027629\|Ga0209422_1021144	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1617	Open in IMG/M
3300027768\|Ga0209772_10011701	All Organisms → cellular organisms → Bacteria	2412	Open in IMG/M
3300027824\|Ga0209040_10110955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1537	Open in IMG/M
3300027854\|Ga0209517_10140809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1557	Open in IMG/M
3300027867\|Ga0209167_10096040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1511	Open in IMG/M
3300028015\|Ga0265353_1001682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1541	Open in IMG/M
3300028379\|Ga0268266_10498040	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300028381\|Ga0268264_10056211	All Organisms → cellular organisms → Bacteria	3289	Open in IMG/M
3300028906\|Ga0308309_10089989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2346	Open in IMG/M
3300028906\|Ga0308309_11912959	Not Available	500	Open in IMG/M
3300030494\|Ga0310037_10488786	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300030659\|Ga0316363_10133546	All Organisms → cellular organisms → Bacteria → Acidobacteria	1076	Open in IMG/M
3300030878\|Ga0265770_1012302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1266	Open in IMG/M
3300031010\|Ga0265771_1014645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	622	Open in IMG/M
3300031231\|Ga0170824_126126083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	810	Open in IMG/M
3300031231\|Ga0170824_126574785	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300031446\|Ga0170820_17421568	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	974	Open in IMG/M
3300031474\|Ga0170818_106668525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1132	Open in IMG/M
3300031573\|Ga0310915_11006276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	581	Open in IMG/M
3300031680\|Ga0318574_10098239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1620	Open in IMG/M
3300031708\|Ga0310686_115979199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3061	Open in IMG/M
3300031718\|Ga0307474_10501819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	951	Open in IMG/M
3300031821\|Ga0318567_10376119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	804	Open in IMG/M
3300031912\|Ga0306921_11267745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	817	Open in IMG/M
3300032054\|Ga0318570_10163404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	999	Open in IMG/M
3300032059\|Ga0318533_10938499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	635	Open in IMG/M
3300032160\|Ga0311301_10535568	All Organisms → cellular organisms → Bacteria → Acidobacteria	1719	Open in IMG/M
3300032261\|Ga0306920_102690383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	680	Open in IMG/M
3300032896\|Ga0335075_10111866	All Organisms → cellular organisms → Bacteria → Acidobacteria	3533	Open in IMG/M
3300033402\|Ga0326728_10012013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19487	Open in IMG/M
3300033405\|Ga0326727_10016648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15457	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.20%
Host-Associated	Host-Associated	5.07%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.07%
Aquatic	Environmental → Aquatic	39.13%
Plants	Host-Associated → Plants	5.07%
Modeled	Engineered → Modeled	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.62%
Freshwater	Environmental → Aquatic → Freshwater	39.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.35%
Peat	Environmental → Terrestrial → Peat	1.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	37.68%
Loam	Environmental → Terrestrial → Soil → Loam	7.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.45%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.72%
Lake	Environmental → Aquatic → Freshwater → Lake	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	22.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	15.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.19%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	15.22%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	15.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.07%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.35%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.45%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.72%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300001156	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003370	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022593	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W2	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025446	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026942	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031010	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055890

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0343.00005880	2166559005	Simulated	MIMRFRPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISL
JGI12706J13280_101521	3300001156	Forest Soil	MIMRFRPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYIS
JGI12627J18819_100282151	3300001867	Forest Soil	MRFRPANISLINRRHYLPRPLLTLSSIEKSNQRTLTGHYISLP
Ga0052254_10980191	3300003152	Sediment	LINRRHYLPRLLLTLSSSEENDQRTLTGHYISGKSRRQLTRNTIHF
JGI26340J50214_100308333	3300003368	Bog Forest Soil	MIMRFRPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISLPD
JGI26337J50220_10310402	3300003370	Bog Forest Soil	MIMRFRPANISLINRRHYLPRLLLTLSSFEKNDQRTLTGHYISFP
Ga0070665_1007365783	3300005548	Switchgrass Rhizosphere	MIMRFRPANISLINRRHYLPRLLLFLSSNYENKNNLNHAQALTGHTISTDQ*
Ga0070765_1001353312	3300006176	Soil	MIMRFRPANISLINRRHYLPRLLLTLSSKYNDKNNPNDLQILTGHTISGEE*
Ga0070765_1016914181	3300006176	Soil	NISLTNRRHYLPWLLLTLSSIKESDRRTSIGHYISLPVSR*
Ga0105245_113765931	3300009098	Miscanthus Rhizosphere	MIMRFRPANISLINRRHYLPRLPLTLSSKYNDKNNPSDLQILTGHTIS
Ga0105241_101587823	3300009174	Corn Rhizosphere	MIMRFRPANISLINRRHYLPRLLLILSSNQKDDQRTLTGHYIS
Ga0116128_10067601	3300009518	Peatland	RPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSGWATI*
Ga0116128_10799582	3300009518	Peatland	RPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE*
Ga0116108_10017101	3300009519	Peatland	PANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSGWATI*
Ga0116108_10094521	3300009519	Peatland	PANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSG*
Ga0116108_10708441	3300009519	Peatland	PANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSGWSAIRPQRV*
Ga0116108_10827652	3300009519	Peatland	PANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE*
Ga0116107_11141222	3300009548	Peatland	MIMRFRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHY
Ga0105238_102695903	3300009551	Corn Rhizosphere	MIMRFRPANISLINRRHYLPRLPLTLSSKYNDKNNPSDLQILTGHTISMS
Ga0116124_10700722	3300009634	Peatland	LINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE*
Ga0116121_10360422	3300009644	Peatland	MIMRFRPANISLINRRLYLHRLLLTLSSVGKDDQRILTGHYIST
Ga0116132_10129773	3300009646	Peatland	MRFRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE*
Ga0116131_10104401	3300009760	Peatland	INRRLYLPRLLLTLPSIETDDQRILTGHYISMSG*
Ga0116219_100160894	3300009824	Peatlands Soil	MRSRPANISLINRRHYLPRLPLTLSSFEKNDQLTLTGHYISLPD
Ga0116223_101333621	3300009839	Peatlands Soil	ANISLINRRHYLPRLPLTLSSFEKNDQLTLTGHYISLPHWR*
Ga0126380_114880342	3300010043	Tropical Forest Soil	MIMRFRPANISLINRRHYLPRLLLILSSFKENDQRTLTGHYISTSGWATTQTESTI*
Ga0074044_100274591	3300010343	Bog Forest Soil	MIMRFRPANISLINRRHYLPRLLLTLSSKYNDKNNPSDLQILTGHTISTSG*
Ga0126369_108400271	3300012971	Tropical Forest Soil	MRFRPANISLINRRHYLPRLLLTLSSIEKNDQPTLTGHYISMYV
Ga0164307_113100172	3300012987	Soil	MIMRFRPANISLINRRHYLPRLLLTLPSNYNDKSNPSDSQTLT
Ga0164305_111176571	3300012989	Soil	MIMRFRPANISLINRRHYLPRLLLTLPSNYNDKSNPSDSQTLTGS
Ga0181539_10055039	3300014151	Bog	RPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSG*
Ga0181538_104847631	3300014162	Bog	RRIMIMRFRPANISLINRRLYLHRLLLTLSSVGKNDQRILTGHYISMSG*
Ga0181528_109009822	3300014167	Bog	ANISLINRRLYLPRLLLTLSSVGKDDQRILTGHYISTSALFKC*
Ga0181534_102397532	3300014168	Bog	MIMRFRPANISLINRRHYLPRLLMTLSSKYNDKNNLSDSQILTGHTISTS
Ga0181535_100050361	3300014199	Bog	IMRFRPANISLINRRHYLPRLLLTLSSKYNDKNNSSDLQILTGHTISTSG*
Ga0181535_101868601	3300014199	Bog	MIMRFRPANISLINRRHYLPRLLMTLSSKYNDKNNLSDSQILTGHTISTSGW
Ga0182024_117552791	3300014501	Permafrost	MIMRFRPANISLINRRHYLPRLLLTLSSKYNDKNNLSDSQILTGHTISI
Ga0137403_101072951	3300015264	Vadose Zone Soil	MIMRFRPANISLINRRHYLPRLLLTLSSKDNDQKKTGDSQI
Ga0182037_101046041	3300016404	Soil	MIMRFRPANISLINRRHYLPRLLLTLSSIEKDDQRILTGHYISRPYCR
Ga0182039_122213262	3300016422	Soil	IMIMRFRPANISLINRRHYLPRLLLTLSSIKKTTSAP
Ga0187856_10063371	3300017925	Peatland	PANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSGWSAIRPQRV
Ga0187856_10280351	3300017925	Peatland	PANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSGWATI
Ga0187856_10644962	3300017925	Peatland	MRFRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHY
Ga0187856_11273822	3300017925	Peatland	PANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE
Ga0187877_11125832	3300017931	Peatland	MRFRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYIS
Ga0187877_13694322	3300017931	Peatland	MRFRPANISLINRRLYLHRLLLTLSSVGKDDQRILTGHYIST
Ga0187848_103097111	3300017935	Peatland	MRFRPANISLINRRLYLPRLLLTLPSIETDDQRILT
Ga0187854_100990661	3300017938	Peatland	RPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSG
Ga0187853_101837902	3300017940	Peatland	RPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE
Ga0187879_102290021	3300017946	Peatland	RPANISLINRRLYLHRLLLTLSSVGKDDQRILTGHYISMSG
Ga0187847_100140626	3300017948	Peatland	MIMRFRPANISLINRRHYLPRLLLTLSSKYNDKNNPSDLQILTGHTISTSG
Ga0187868_10151281	3300018002	Peatland	PANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSG
Ga0187865_10452272	3300018004	Peatland	MRFRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSG
Ga0187873_11315851	3300018013	Peatland	ANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE
Ga0187880_11467511	3300018016	Peatland	MIVRFRPANISLINRRLYLPRLLLTLSSIEKDNQRILTGHYISISDTPSSLRCGVIG
Ga0187861_100182281	3300018020	Peatland	FRPANISLINRRLYLHRLLLTLSSVGKDDQRILTGHYISTSG
Ga0187857_101031792	3300018026	Peatland	MRFRPANISLINRRLYLHRLLLTLSSVGKDDQRILTGHYISTS
Ga0187857_102236971	3300018026	Peatland	ISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE
Ga0187863_100072239	3300018034	Peatland	MIMRFRPANISLINRRHYLPRLLLTLSSKYNDKNNSSDLQILTGHTISTSG
Ga0187863_101080581	3300018034	Peatland	RRIMIMRFRPANISLINRRHYLPRLLLTLYSFEEDDQRLLTGHSISISGLRVTRP
Ga0187851_102505342	3300018046	Peatland	RFRPANISLINRRHYLPRLLLTLSSIEKGDQRTLTGHYISMSGLPVIQELDSEKSDRD
Ga0193727_11007742	3300019886	Soil	MRFRPANISLINRRHYLPRLLLTLSSKYNDKNNHNDLQILTGHTISGKYQR
Ga0210401_100622785	3300020583	Soil	MRFRPANISLINRRHYLPRLLLTLSSFEKNDQRTLTGHYISISP
Ga0210401_100797028	3300020583	Soil	ISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISLPGCR
Ga0210405_101584672	3300021171	Soil	MIMRFRPANISLINRRHYLPRLLLTLSSKYNDKNNPNDLQILTGHTISGKYGR
Ga0210396_100719251	3300021180	Soil	LINRRHYLPRLLLTLSSFEKNDQRILTGHYISLPGCR
Ga0210396_101895843	3300021180	Soil	MIMRFRPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHY
Ga0210396_106949921	3300021180	Soil	MIMRFRPANISLINRRHYLPRLLLTLSSKYNDKNNPNDLQILTGHTISGERIFLKHA
Ga0210393_100147471	3300021401	Soil	RPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISLPGCR
Ga0210393_100688895	3300021401	Soil	MRFRPANISLINRRLYLPRLRLILSSIEKDDLRLLTGHYISMSGLPFTRQE
Ga0210385_103310344	3300021402	Soil	PANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISLPYCR
Ga0210397_101301203	3300021403	Soil	MRFRPANISLINRRHYLPRLLLTLSSKYNDKNNPNDLQILTGHTISGEESAVIL
Ga0210397_101818673	3300021403	Soil	RSRPANISLINRRLYLPRLRLILSSIEKDDLRLLTGHYISMSGLPFTRQE
Ga0210389_101223551	3300021404	Soil	MRFRPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISISESAVIRS
Ga0210389_105094081	3300021404	Soil	RFRPANISSINRRHYLPRLLLTLSSFEKNDQRSLTGHYISLP
Ga0210387_104751172	3300021405	Soil	MRFRPANISLINRRHYMPRLLLILSLKYKHKNHPTDLQLLTGHTISTSGSPKTRPKR
Ga0210386_102353351	3300021406	Soil	MRFRPANISLINRRLYLPRLLLTLSSIEKDDQRILT
Ga0210383_100148047	3300021407	Soil	MRFRPANISLINRRHYLPRLLLTLSPFEKNDQRILTGHYISLPTCRSSTQNRVEGGR
Ga0210383_101838181	3300021407	Soil	MRFRPANISLINRRHYLPRLLLTLSSKYNDKNNPNDLQILTGHTISGEGWATIRH
Ga0210394_112944461	3300021420	Soil	RFRPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISLLYN
Ga0210384_102699732	3300021432	Soil	MRFRPANISLINRRLYLPRLRLILSSIEKDDLRLLTGHYISMSVMPRQV
Ga0210391_101857542	3300021433	Soil	MRFRPANISLINRRHYLPRLLLTLSSKYNDKNNPNDLQILTGHTISGDRIFL
Ga0210391_107837721	3300021433	Soil	MRFRPANISLINRRHYLPRLLLTLSAFEKNDQRILTGHYISLPYCRLPTRNL
Ga0210390_100128661	3300021474	Soil	LINRRHYLPRLLLTLSSFEKNDQRILTGHYISLPYC
Ga0210390_100618781	3300021474	Soil	INRRHYLPRLLLTLSSFEKNDQRILTGHYISLPYCR
Ga0210392_100151165	3300021475	Soil	MRFRPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISLPNGR
Ga0210398_100124621	3300021477	Soil	QPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISLPGCR
Ga0210398_100759005	3300021477	Soil	MRFRPANISLINRRHYLPRLLLTLSSKYNDKNNATDLQILTGHTISISG
Ga0210402_100378646	3300021478	Soil	PANISLINRRHYLPRLLLTPSSFEKNDQRILTGHYISLPDRRRCARNPFI
Ga0236338_10194312	3300022593	Freshwater	MRFRPANISLINRRLYLPRLLLTLSSIRKNDQRILTGHY
Ga0208194_10173672	3300025412	Peatland	MRFRPANISLINRRLYLHRLLLTLSSVGKDDQRILTGHYISTSALF
Ga0208036_10244651	3300025419	Peatland	MRFRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSGAMPKMPATSPS
Ga0208034_10421562	3300025442	Peatland	IMRFRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE
Ga0208038_10008051	3300025446	Peatland	RFRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSGWATI
Ga0208038_10212021	3300025446	Peatland	MRFRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMS
Ga0208038_10388632	3300025446	Peatland	SLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE
Ga0208190_10164354	3300025473	Peatland	ANISLINRRLYLHRLLLTLSSVGKDDQRILTGHYISTSG
Ga0208192_10270002	3300025477	Peatland	MRFRPANISLINRRLYLPRLLLTLPSIETDDQRIL
Ga0208688_10708661	3300025480	Peatland	FRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSGWATI
Ga0208686_10555942	3300025500	Peatland	FRPANISLINRRLYLPRLLLTLPSIETDDQRILTGHYISMSE
Ga0207685_101372571	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MIMRFRPANISLINRRHYLPRLLLTLPSNYNDKSNPSDSQTLTGSH
Ga0207654_100175531	3300025911	Corn Rhizosphere	MIMRFRPANISVINRRHYLPRLPLILSSNEKGDQRTLTGHYISTSGL
Ga0207783_10034431	3300026942	Tropical Forest Soil	MIMRFRPANISLINRRHYLPRLLLILSSIEKNDQRTLTGHYISTSG
Ga0207777_10111243	3300027330	Tropical Forest Soil	MRSRPANISLINRRHYLPRLPLTLSSIKENDQRTLTGHYIST
Ga0209418_10835331	3300027371	Forest Soil	MRFRPANISLINRRLYLPRLLLILSSIEKDDQHILTGHYISMP
Ga0208199_10600101	3300027497	Peatlands Soil	MRSRPANISLINRRHYLPRLPLTLSSFEKNDQLTLTGHYISLPG
Ga0209422_10211441	3300027629	Forest Soil	MRFRPANISLINRRHYLPRLLLTLFSKYNDKNNPSDLQILTGHTISISGW
Ga0209772_100117013	3300027768	Bog Forest Soil	MRFRPANISLINRRHYLPRLLLTLSSFEKNDQRTLTGHYISLP
Ga0209040_101109552	3300027824	Bog Forest Soil	MRFRPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYIS
Ga0209517_101408092	3300027854	Peatlands Soil	MRSRPANISLINRRHYLPRLPLTLSSFEKNDQLTLTGHYISL
Ga0209167_100960401	3300027867	Surface Soil	MRFRPANISLINRRHYLPRLPLTLSSIETNGQRTLTGHYISGKH
Ga0265353_10016821	3300028015	Soil	MRFRPANISLINRRHYLPRLLLTLSPFEKNDQRILTGHYIS
Ga0268266_104980402	3300028379	Switchgrass Rhizosphere	MIMRFRPANISLINRRHYLPRLLLFLSSNYENKNNLNHAQALTGHTISTDQ
Ga0268264_100562115	3300028381	Switchgrass Rhizosphere	MIMRFRPANISLINRRHYLPRLLLTLSLKYNDKNNPSDLQILTGHTISISV
Ga0308309_100899893	3300028906	Soil	MIMRFRPANISLINRRHYLPRLLLTLSSKYNDKNNPNDLQILTGHTISGEE
Ga0308309_119129592	3300028906	Soil	NISLTNRRHYLPWLLLTLSSIKESDRRTSIGHYISLPVSR
Ga0310037_104887861	3300030494	Peatlands Soil	RRILIMRSRPANISLINRRHYLPRLPLTLSSFEKNDQLTLTGHYISLPHWR
Ga0316363_101335461	3300030659	Peatlands Soil	ANISLINRRHYLPRLPLTLSSFEKNDQLTLTGHYISLPHWR
Ga0265770_10123021	3300030878	Soil	MRFRPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISLPDSRQAASS
Ga0265771_10146452	3300031010	Soil	MRFRPANISLINRRHYLPRLLLTLSSFEKNDQRILTGHYISLPYCR
Ga0170824_1261260832	3300031231	Forest Soil	MRLRPANISLINRRHYMPRLRLTLSLNYQNKNNLTHVKPLTGHTISTS
Ga0170824_1265747851	3300031231	Forest Soil	MIMRFRPANISLINRRHYLPRLLLTLSSFEKNDQHTLT
Ga0170820_174215681	3300031446	Forest Soil	MRSRPANISLINRRHYLPRLLLTLSSKYNDKNNPNDSQILTGHTISMSGL
Ga0170818_1066685251	3300031474	Forest Soil	MIMRSRPANISLINRRHYLPRLLLTLSSKYNDKNNPNDSQILTGHTISMSG
Ga0310915_110062762	3300031573	Soil	MRFRPANISLINRRHLLPRLLLTLSSIEENDQRTLTGHYISG
Ga0318574_100982392	3300031680	Soil	MRFRPANISLINRRHLLPRLLLTLSSIEENDQRTLTGHYISGKSSR
Ga0310686_1159791995	3300031708	Soil	ANISLINRRHYLPRLLLTLSSFEKNDQRTLTGHYISISG
Ga0307474_105018192	3300031718	Hardwood Forest Soil	MRFRPANISLINRRLYLPRLLLTLSSIEKDDQRILTGHYISMSVLPTIRPQ
Ga0307474_109619301	3300031718	Hardwood Forest Soil	MRFRPANIRLINRRHYLPRLLLPLYSFKRNDQRTL
Ga0318567_103761192	3300031821	Soil	MRFRPANISLINRRHYMPRLPLTLSSIERNDQRTLTGHYISGKYRRPH
Ga0306921_112677451	3300031912	Soil	MRFRPANISLINRRHYLPRLLLTLSSIEKDDQRTLTGHYISTS
Ga0318570_101634041	3300032054	Soil	MRFRPANISLINRRHYPPRLPLTLSSIERNDQPTLTGHYI
Ga0318533_109384991	3300032059	Soil	MRFRPANISLINRRHYLPRLLLTLSSIEKDDQRTLTGHYISASGLGVIRS
Ga0311301_105355681	3300032160	Peatlands Soil	PANISLINRRHYLPRLPLTLSSFEKNDQLTLTGHYISLPHWR
Ga0306920_1026903831	3300032261	Soil	MRFRPANISLINRRHYLPRLRLTLSSFKRNDQRTLTGHYISGKTVFHLVAVNTR
Ga0335075_101118665	3300032896	Soil	MRFRPANISLINRRPYLPRLLLTLSSIKKYDQRILTGHYISTDGWPVNHQQL
Ga0326728_100120131	3300033402	Peat Soil	MIMRFRPANISLINRRHYLPRLLLTLSSNEKDDQRILTGHYISISE
Ga0326727_100166481	3300033405	Peat Soil	IMIMRFRPANISLINRRHYLPRLLLTLSSNEKDDQRILTGHYISISE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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