Metagenome / Metatranscriptome Family F055875

Basic Information
Family ID	F055875
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	39 residues
Representative Sequence	GDTDVPLAPVSHGCVRIPMDIAAFFHKLVKVPGEPVYIR
Number of Associated Samples	114
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.96 %
% of genes near scaffold ends (potentially truncated)	94.93 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (89.855 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.739 % of family members)
Environment Ontology (ENVO)	Unclassified (21.014 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.899 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.96% β-sheet: 0.00% Coil/Unstructured: 91.04%
Feature Viewer

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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01478	Peptidase_A24	11.59
PF03988	DUF347	6.52
PF02627	CMD	4.35
PF00497	SBP_bac_3	2.17
PF13302	Acetyltransf_3	2.17
PF13828	DUF4190	1.45
PF00392	GntR	1.45
PF01061	ABC2_membrane	1.45
PF13533	Biotin_lipoyl_2	1.45
PF01844	HNH	1.45
PF05731	TROVE	0.72
PF12700	HlyD_2	0.72
PF13460	NAD_binding_10	0.72
PF00082	Peptidase_S8	0.72
PF04679	DNA_ligase_A_C	0.72
PF01553	Acyltransferase	0.72
PF12840	HTH_20	0.72
PF07690	MFS_1	0.72
PF00326	Peptidase_S9	0.72
PF03466	LysR_substrate	0.72
PF11258	DUF3048	0.72
PF03640	Lipoprotein_15	0.72
PF06912	DUF1275	0.72
PF04972	BON	0.72
PF08940	DUF1918	0.72
PF01522	Polysacc_deac_1	0.72
PF01243	Putative_PNPOx	0.72
PF00440	TetR_N	0.72
PF12680	SnoaL_2	0.72
PF01145	Band_7	0.72
PF09334	tRNA-synt_1g	0.72
PF00106	adh_short	0.72
PF02585	PIG-L	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	6.52
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	4.35
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	4.35
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.72
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.72
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.72
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.86 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.86 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.86 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.88 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	79.71 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	57.97 %
Unclassified	root	N/A	10.14 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	2.17 %

Name	Rank	Taxonomy	Distribution
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	15.94 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	13.04 %
Unclassified	root	N/A	10.14 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.70 %
Actinobacteria bacterium 13_1_20CM_3_71_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	2.17 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.17 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %

Name	Rank	Taxonomy	Distribution
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	15.94 %
Unclassified	root	N/A	10.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	5.80 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.62 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	2.17 %
Actinobacteria bacterium 13_1_20CM_3_71_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	2.17 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	15.94 %
Unclassified	root	N/A	10.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	5.80 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.62 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	2.17 %
Actinobacteria bacterium 13_1_20CM_3_71_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	2.17 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.72 %

Name	Rank	Taxonomy	Distribution
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	15.94 %
Unclassified	root	N/A	10.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5.80 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.62 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	2.17 %
Actinobacteria bacterium 13_1_20CM_3_71_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	2.17 %
unclassified Saccharothrix	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → unclassified Saccharothrix	0.72 %

Name	Rank	Taxonomy	Distribution
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	15.94 %
Unclassified	root	N/A	10.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5.80 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.62 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	2.17 %
Actinobacteria bacterium 13_1_20CM_3_71_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	2.17 %
Saccharothrix sp. ST-888	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → unclassified Saccharothrix → Saccharothrix sp. ST-888	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_100790440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300005436\|Ga0070713_101153193	Not Available	750	Open in IMG/M
3300005445\|Ga0070708_101014031	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005540\|Ga0066697_10639007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	587	Open in IMG/M
3300005541\|Ga0070733_10430367	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005576\|Ga0066708_10211768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1220	Open in IMG/M
3300005610\|Ga0070763_10236694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	985	Open in IMG/M
3300005610\|Ga0070763_10670274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300006028\|Ga0070717_10325320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1370	Open in IMG/M
3300006176\|Ga0070765_101026228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	780	Open in IMG/M
3300006237\|Ga0097621_100128755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2152	Open in IMG/M
3300006755\|Ga0079222_10819822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	764	Open in IMG/M
3300006804\|Ga0079221_11777498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300006806\|Ga0079220_10436760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	870	Open in IMG/M
3300006954\|Ga0079219_11029504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	687	Open in IMG/M
3300007775\|Ga0102953_1325312	Not Available	648	Open in IMG/M
3300009519\|Ga0116108_1000786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17701	Open in IMG/M
3300009522\|Ga0116218_1119256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1200	Open in IMG/M
3300009672\|Ga0116215_1523014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	513	Open in IMG/M
3300009698\|Ga0116216_10086606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1928	Open in IMG/M
3300009698\|Ga0116216_10901156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	529	Open in IMG/M
3300009824\|Ga0116219_10209853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1113	Open in IMG/M
3300009824\|Ga0116219_10579989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300010048\|Ga0126373_11131623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	849	Open in IMG/M
3300010360\|Ga0126372_12502696	Not Available	567	Open in IMG/M
3300010361\|Ga0126378_11845059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	688	Open in IMG/M
3300010379\|Ga0136449_104458457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	515	Open in IMG/M
3300010399\|Ga0134127_12516554	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300010867\|Ga0126347_1306516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300010880\|Ga0126350_10190519	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300011120\|Ga0150983_10074174	Not Available	699	Open in IMG/M
3300012096\|Ga0137389_11702126	Not Available	527	Open in IMG/M
3300012206\|Ga0137380_10760351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	838	Open in IMG/M
3300012210\|Ga0137378_10628462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	984	Open in IMG/M
3300012211\|Ga0137377_10041185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4233	Open in IMG/M
3300012363\|Ga0137390_10405261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	1342	Open in IMG/M
3300012944\|Ga0137410_11826782	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012971\|Ga0126369_13284593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300013105\|Ga0157369_10791068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	975	Open in IMG/M
3300013105\|Ga0157369_12598851	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300013296\|Ga0157374_12760908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300013308\|Ga0157375_13283284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	539	Open in IMG/M
3300014166\|Ga0134079_10157635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300014654\|Ga0181525_10023497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3779	Open in IMG/M
3300014745\|Ga0157377_10321176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1029	Open in IMG/M
3300016319\|Ga0182033_10486232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1058	Open in IMG/M
3300017926\|Ga0187807_1072172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1075	Open in IMG/M
3300017928\|Ga0187806_1113937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	872	Open in IMG/M
3300017931\|Ga0187877_1031613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2631	Open in IMG/M
3300017937\|Ga0187809_10117793	Not Available	901	Open in IMG/M
3300017937\|Ga0187809_10252092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	639	Open in IMG/M
3300017937\|Ga0187809_10372300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300017940\|Ga0187853_10076372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1675	Open in IMG/M
3300017942\|Ga0187808_10360229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	661	Open in IMG/M
3300017959\|Ga0187779_10134540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1514	Open in IMG/M
3300017959\|Ga0187779_11098533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300017970\|Ga0187783_10052803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2998	Open in IMG/M
3300017970\|Ga0187783_10065275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2682	Open in IMG/M
3300017972\|Ga0187781_11346658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	527	Open in IMG/M
3300017974\|Ga0187777_10390049	All Organisms → cellular organisms → Bacteria → Terrabacteria group	962	Open in IMG/M
3300017974\|Ga0187777_11251517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	544	Open in IMG/M
3300018007\|Ga0187805_10314721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300018047\|Ga0187859_10465535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	700	Open in IMG/M
3300018047\|Ga0187859_10833456	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300018431\|Ga0066655_11321158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	519	Open in IMG/M
3300018482\|Ga0066669_11144606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300019278\|Ga0187800_1417260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	682	Open in IMG/M
3300019887\|Ga0193729_1217379	Not Available	637	Open in IMG/M
3300020580\|Ga0210403_10629376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	865	Open in IMG/M
3300020583\|Ga0210401_10458425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1137	Open in IMG/M
3300020583\|Ga0210401_11546810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	520	Open in IMG/M
3300021088\|Ga0210404_10258587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	949	Open in IMG/M
3300021180\|Ga0210396_10118782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2386	Open in IMG/M
3300021180\|Ga0210396_11708843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300021374\|Ga0213881_10026019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2438	Open in IMG/M
3300021402\|Ga0210385_10403491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1027	Open in IMG/M
3300021404\|Ga0210389_10066493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2764	Open in IMG/M
3300021404\|Ga0210389_10271936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1327	Open in IMG/M
3300021405\|Ga0210387_11354628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	613	Open in IMG/M
3300021433\|Ga0210391_11436106	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300021477\|Ga0210398_10129563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2051	Open in IMG/M
3300021478\|Ga0210402_10689342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	944	Open in IMG/M
3300021860\|Ga0213851_1861789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300025929\|Ga0207664_10216616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1659	Open in IMG/M
3300025929\|Ga0207664_11175783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	685	Open in IMG/M
3300027100\|Ga0208862_103914	Not Available	552	Open in IMG/M
3300027853\|Ga0209274_10518384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300027855\|Ga0209693_10074625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1673	Open in IMG/M
3300027867\|Ga0209167_10231842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	988	Open in IMG/M
3300027884\|Ga0209275_10398313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	776	Open in IMG/M
3300027889\|Ga0209380_10560764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300027908\|Ga0209006_10979749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300028379\|Ga0268266_11059195	Not Available	785	Open in IMG/M
3300028806\|Ga0302221_10137138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	1079	Open in IMG/M
3300028877\|Ga0302235_10288495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300028906\|Ga0308309_10085015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2404	Open in IMG/M
3300028906\|Ga0308309_10660720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	908	Open in IMG/M
3300028906\|Ga0308309_10749387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	849	Open in IMG/M
3300028906\|Ga0308309_11161931	Not Available	666	Open in IMG/M
3300028906\|Ga0308309_11359929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	609	Open in IMG/M
3300029913\|Ga0311362_10893063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300030509\|Ga0302183_10208220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300031344\|Ga0265316_10224078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1386	Open in IMG/M
3300031543\|Ga0318516_10681657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300031561\|Ga0318528_10433124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300031680\|Ga0318574_10013705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3776	Open in IMG/M
3300031708\|Ga0310686_108350101	All Organisms → cellular organisms → Bacteria → Terrabacteria group	788	Open in IMG/M
3300031715\|Ga0307476_11315641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300031718\|Ga0307474_10749085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	772	Open in IMG/M
3300031765\|Ga0318554_10424088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754	Open in IMG/M
3300031765\|Ga0318554_10465316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300031819\|Ga0318568_10292796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1010	Open in IMG/M
3300031833\|Ga0310917_10307407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300031890\|Ga0306925_11009143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300031912\|Ga0306921_10706485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1158	Open in IMG/M
3300031912\|Ga0306921_11245453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300031981\|Ga0318531_10133568	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300032001\|Ga0306922_10358497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1564	Open in IMG/M
3300032008\|Ga0318562_10476394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300032009\|Ga0318563_10799020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300032039\|Ga0318559_10545235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → unclassified Saccharothrix → Saccharothrix sp. ST-888	541	Open in IMG/M
3300032041\|Ga0318549_10419297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300032055\|Ga0318575_10623582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	546	Open in IMG/M
3300032068\|Ga0318553_10109264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1414	Open in IMG/M
3300032091\|Ga0318577_10155542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1089	Open in IMG/M
3300032180\|Ga0307471_101014413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	997	Open in IMG/M
3300032783\|Ga0335079_11715728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300032828\|Ga0335080_11088689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	809	Open in IMG/M
3300032892\|Ga0335081_10226616	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2552	Open in IMG/M
3300032892\|Ga0335081_11470869	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300032898\|Ga0335072_11058100	Not Available	737	Open in IMG/M
3300032954\|Ga0335083_10176072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1987	Open in IMG/M
3300032954\|Ga0335083_10266648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1522	Open in IMG/M
3300033134\|Ga0335073_10272683	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300033134\|Ga0335073_10595320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1237	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.20%
Host-Associated	Host-Associated	5.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Aquatic	Environmental → Aquatic	10.87%
Plants	Host-Associated → Plants	5.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.71%
Freshwater	Environmental → Aquatic → Freshwater	10.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.07%
Peat	Environmental → Terrestrial → Peat	2.90%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.17%
Loam	Environmental → Terrestrial → Soil → Loam	14.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.07%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.07%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.45%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.45%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.72%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007775	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF025 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055875

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1007904401	3300004082	Bog Forest Soil	DTDVPLEPVSHGCVRIPMDIAAFFHTLVRIPGEPVILRR*
Ga0070713_1011531932	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	IHGDVPVPLAAVSHGCVRIPMDIAGFFHKMVHVNETNGTPIYIRGRVPGT*
Ga0070708_1010140311	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GDVPVPLAAVSHGCVRIPMDIAGFFHKMVHVNETNGTPIYIRGHVPGT*
Ga0066697_106390071	3300005540	Soil	TDVPLAPVSHGCVRIPMDIANFFHKLVKIPGEPVYIR*
Ga0070733_104303672	3300005541	Surface Soil	GGGVPLNPVSHGCVRIPYDIAQFFHRLVRTRGTLVYIY*
Ga0066708_102117683	3300005576	Soil	IHGDTDVPLAPVSHGCVRIPMDIANFFHNLVKIPGEPVYIR*
Ga0070763_102366941	3300005610	Soil	PLQPVSHGCVRIPMDVANIFPGLVPRNGIPVYVRR*
Ga0070763_106702741	3300005610	Soil	PLAPVSHGCVRIPMDIAAFFHTLVKIPGEPVIIRH*
Ga0070717_103253201	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HGDTYVPVNPVSHGCIRIPMDIAAFFHTMVKTPGTEVFVYR*
Ga0070765_1010262281	3300006176	Soil	VPLAPVSHGCVRIPMDIAAFFHKLVIIPGEPVYIR*
Ga0097621_1001287551	3300006237	Miscanthus Rhizosphere	HGDTDVPLAPVSHGCVRIPMDIANFFHKLVKVPGERVYIR*
Ga0079222_108198221	3300006755	Agricultural Soil	IHGDTDVPLAPVSHGCVRIPMDIAAFFHKLVRIPGEPVYIR*
Ga0079221_117774981	3300006804	Agricultural Soil	PLRPASHGCVRIPIDVAAFFHTLIPISGTPVYIRR*
Ga0079220_104367602	3300006806	Agricultural Soil	VPLAPVSHGCVRIPMDIAAFFHNLVRIPGEPVYIR*
Ga0079219_110295042	3300006954	Agricultural Soil	DTDVPLAPVSHGCVRIPMDIANFFHKLVKIPGEPVYIR*
Ga0102953_13253122	3300007775	Soil	LAAVSHGCIRIPMDIAQFFHKLVHVSQAGGTPIYIRGRVRGT*
Ga0116108_10007865	3300009519	Peatland	VPLQPVSHGCVRIPMDIAQFFHTLVPVPGTPVYIRG*
Ga0116218_11192561	3300009522	Peatlands Soil	TEVPLAPVSHGCIRIPMDIAAFFHTLVKVPGEPVIVRN*
Ga0116215_15230141	3300009672	Peatlands Soil	TDVPLAPVSHGCVRIPMDIAAFFHKLVTIPGEPVYIR*
Ga0116216_100866061	3300009698	Peatlands Soil	IHGDTDVPLAPVSHGCVRIPMDIAAFFHKLVKVPGEPVYIR*
Ga0116216_109011561	3300009698	Peatlands Soil	VPLQPVSHGCVRIPMDIAAFFHTLVRAPGTPVYIYD*
Ga0116219_102098533	3300009824	Peatlands Soil	DTYVPLQPVSHGCVRIPMDIAAFFHTLVKAPGTPVYIYD*
Ga0116219_105799891	3300009824	Peatlands Soil	IHGDTDVPLQPVSHGCVRIPMDVAAFFHTLVKTPGTPVYIYN*
Ga0126373_111316231	3300010048	Tropical Forest Soil	TYVPVNPVSHGCVRIPMDIAAFFHTMVKTVGTPVYIYR*
Ga0126373_128447442	3300010048	Tropical Forest Soil	PFYPASHGCVRIPFDIANIFHTLIKIPGTPIYIRS*
Ga0126372_125026962	3300010360	Tropical Forest Soil	PLKPASHGCVRIPLDIAAFFHTLIPTPGTPVYIRRK*
Ga0126378_118450591	3300010361	Tropical Forest Soil	DVPLAPVSHGCVRIPMDIAVFFHKLVKVPGEPVYIR*
Ga0136449_1044584571	3300010379	Peatlands Soil	PLQPVSHGCVRIPMDVAAFFHTLVKTPGTPVYIYN*
Ga0134127_125165542	3300010399	Terrestrial Soil	GDVPVPLAAVSHGCIRIPMDIAAFFHKLVYVNEQKGTPIYIRGRVPGT*
Ga0126347_13065161	3300010867	Boreal Forest Soil	IGTLFAIHGDTEVPLAPVSHGCVRIPMDIAAFFHKLVHIPGEPVIVRD*
Ga0126350_101905192	3300010880	Boreal Forest Soil	SHGCVRIPMDVAAFFHTLVHASESDGTPVYVRGRAPGT*
Ga0150983_100741741	3300011120	Forest Soil	IHGDTDVPVNPVSHGCVRIPMDIAAFFHNMVKTPGTEVFVYK*
Ga0137389_117021262	3300012096	Vadose Zone Soil	HGDTYVPLAPVSHGCVRIPMDIAAFFHKLVYVPGEPVYIRG*
Ga0137380_107603512	3300012206	Vadose Zone Soil	DTDVPLAPVSHGCVRIPMDIANFFHKLVKVPGEPVYIR*
Ga0137378_106284623	3300012210	Vadose Zone Soil	DTDVPLAPVSHGCVRIPMDIANFFHKLVKVPGERVYIR*
Ga0137377_100411856	3300012211	Vadose Zone Soil	VPLAPVSHGCVRIPMDIANFFHKLVKIPGEPVYIR*
Ga0137390_104052613	3300012363	Vadose Zone Soil	GDIPVPYYAVSHGCVRIPMFIAQFFHKLIHISQTDGTRIYIHGHI*
Ga0137410_118267822	3300012944	Vadose Zone Soil	VPVPLAAVSHGCVRIPMDIAGFFHRMVHINETNGTPIYIRGRVPGT*
Ga0126369_132845931	3300012971	Tropical Forest Soil	HGEWNYNVPVNPVSHGCVRIPYNIAVFFHTMVKTPGTSVYIYK*
Ga0157369_107910683	3300013105	Corn Rhizosphere	TDVPLAPVSHGCVRIPMDIAAFFHKLVRIPGEPVYIR*
Ga0157369_125988512	3300013105	Corn Rhizosphere	TDVPLAPVSHGCVRIPMDIAAFFHKLVYVNEQKGTPIYIRGRVPGT*
Ga0157374_127609082	3300013296	Miscanthus Rhizosphere	TAFAIHGDTDVPLAPVSHGCVRIPMDIANFFHKLVTVPGERVSLR*
Ga0157375_132832842	3300013308	Miscanthus Rhizosphere	HGDTDVPLAPVSHGCVRIPMDIANFFHKLVKVPGEPVYIR*
Ga0134079_101576351	3300014166	Grasslands Soil	HGDTDVPLAPVSHGCVRIPMDIANFFHKLVKTPGEPVYIR*
Ga0181525_100234974	3300014654	Bog	NGGGVPLNPVSHGCVRIPYDVAQFFHRLVRTRGTPVYIY*
Ga0157377_103211763	3300014745	Miscanthus Rhizosphere	VPLAPVSHGCVRIPMDIANFFHKLVKVPGERVYIR*
Ga0182033_104862322	3300016319	Soil	PLRPRSHGCVRIPLDVAAFFHTLVPTPGTPVYIRD
Ga0187807_10721722	3300017926	Freshwater Sediment	VPLAPVSHGCIRIPMDIAAFFHTLVKVPGEPVIVRR
Ga0187806_11139372	3300017928	Freshwater Sediment	HGDTDVPLQPVSHGCVRIPMDIAGFFHTLVSTPGTPVYIRR
Ga0187877_10316132	3300017931	Peatland	VPLQPVSHGCVRIPMDIAQFFHTLVPVPGTPVYIRG
Ga0187809_101177931	3300017937	Freshwater Sediment	PVNPVSHGCIRIPMDIAAFFHTMVKTPGTEVFVYK
Ga0187809_102520922	3300017937	Freshwater Sediment	MRRPGLPQPVSHGCVRIPVDIAAFFHTLVPTPGTPVYIRG
Ga0187809_103723001	3300017937	Freshwater Sediment	IHGDTYVPLQPVSHGCLRCPIDISAFFHTLVTPPGTPVYIYN
Ga0187853_100763722	3300017940	Peatland	VPLQPVSHGCVPIPMDIAQFFHTLVPVPGTPVYIRG
Ga0187808_103602291	3300017942	Freshwater Sediment	HGDTDVPLAPVSHGCIRIPMDIAAFFHTLVKIPGEPVIIRR
Ga0187779_101345401	3300017959	Tropical Peatland	HGDTYVPLQPVSHGCVRIPMDIAAFFHTLVTTPGTPVYVFN
Ga0187779_110985333	3300017959	Tropical Peatland	YVPLQPVSHGCVRIPMDIAAFFHTVVPTPGTPVYIYN
Ga0187783_100528034	3300017970	Tropical Peatland	IHGDTYVPLQPVSHGCVRIPMDIAAFFHTLVAVPGTPVYIRSS
Ga0187783_100652751	3300017970	Tropical Peatland	DTYVPLAPVSHGCIRIPMDIAAFFYTLVKVPGEPVIVRN
Ga0187781_113466581	3300017972	Tropical Peatland	GDTYVPLAPVSHGCIRIPMDIAAFFYTLVKIPGEPVIVRN
Ga0187777_103900492	3300017974	Tropical Peatland	YAASHGCVRIPMFIANFFHKLVYVNETNGTPVYIRGHVPGT
Ga0187777_112515172	3300017974	Tropical Peatland	HGDTYVPLAPVSHGCVRIPMDVAAFFHKLVKIPGEPVIIRR
Ga0187805_103147212	3300018007	Freshwater Sediment	DTDVPLLPVSHGCVRIPMDIAQFFHTMIVPGTPVYIRGS
Ga0187859_104655352	3300018047	Peatland	DVPLAPVSHGCVRIPMDVAAFFHTLVHIPGEPVIVRG
Ga0187859_108334562	3300018047	Peatland	VPLAPVSHGCVRIPMDVAAFFHDLVKVPGTPVYIRDR
Ga0066655_113211581	3300018431	Grasslands Soil	TAFAIHGDTDVPLAPVSHGCVRIPMDIAAFFHKLVQIPGEPVYVR
Ga0066669_111446061	3300018482	Grasslands Soil	DVPLAPVSHGCVRIPMDIANFFHNLVKIPGEPVYIR
Ga0187800_14172602	3300019278	Peatland	GDSVVPLQPVSHGCVRIPMDIAAFFHTLLPAPGTPVYIRR
Ga0193729_12173791	3300019887	Soil	VSHGCVRIPMDIAAFFHKLVHVNETNGTPIYIRGRVGS
Ga0210403_106293762	3300020580	Soil	GDTDVPLAPVSHGCVRIPMDIAAFFHTLVKIPGEPVIIRR
Ga0210401_104584251	3300020583	Soil	DVPLAPVSHGCVRIPMDIAAFFHTLVKVPGEPVIIRR
Ga0210401_115468101	3300020583	Soil	GDTDVPLAPVSHGCVRIPMDIAAFFHTLVKVPGEPVIIRG
Ga0210404_102585871	3300021088	Soil	AIHGDTDVPLAPVSHGCVRIPMDIAAFFHTLVKIPGEPVIIRR
Ga0210396_101187821	3300021180	Soil	DTDVPLAPVSHGCVRIPMDIAAFFHTLVKVPGEPVIIRG
Ga0210396_117088431	3300021180	Soil	SHGCVRIPMDIAAFFHKLVHVNETNGTPIYIRGRVGS
Ga0213881_100260194	3300021374	Exposed Rock	DVPLQPVSHGCVRIPMDIAAFFHTLVHIPGEPVYIR
Ga0210385_104034912	3300021402	Soil	AIHGDTDVPLAPVSHGCVRIPMDIAAFFHTLVKVPGEPVIIRR
Ga0210389_100664931	3300021404	Soil	DVPLQPVSHGCVRIPMDIARFFPGLVPREGIPVYLRR
Ga0210389_102719361	3300021404	Soil	TDVPLAPVSHGCVRIPMDIAAFFHKLVHIPGEPVYIR
Ga0210387_113546282	3300021405	Soil	PPEPVSHGCVRIPMDIAAFFHTLVKVPGEPVIVSH
Ga0210391_114361062	3300021433	Soil	LYAASHGCVRIPMDIASFFHTLVPLGRTPVYIRGAI
Ga0210398_101295631	3300021477	Soil	DIPVPLQPVSHGCVRIPMDIAAFFHTLVQVPGEPVYIRD
Ga0210402_106893421	3300021478	Soil	HGDTDVPLAPVSHGCVRIPMDIANFFHKLVKIPGEPVYIR
Ga0213851_18617891	3300021860	Watersheds	AFAIHGDTDVPLAPVSHGCLRIPMDIAAFFHTLVKIPGEPVIIRR
Ga0207664_102166163	3300025929	Agricultural Soil	AIHGDTDVPLAPVSHGCVRIPMDIAAFFHKLVQIPGEPVYIR
Ga0207664_111757831	3300025929	Agricultural Soil	VPLNPVSHGCVRIPYDIAQLFHTLVKTPGTPVYIYS
Ga0208862_1039142	3300027100	Forest Soil	PVNPVSHGCVRIPMDIAAFFHNMVKTPGTEVFVYK
Ga0209274_105183841	3300027853	Soil	PVNPVSHGCIRIPMDIAAFFHTMVKTPGTEVFVYKYPF
Ga0209693_100746251	3300027855	Soil	VPLAPVSHGCVRIPMDIAAFFHTLVKVPGEPVIIRG
Ga0209167_102318422	3300027867	Surface Soil	PYGGGVPLNPVSHGCVRIPYDIAQFFHRLVRTRGTLVYIY
Ga0209275_103983132	3300027884	Soil	TSVPLYAASHGCVRIPMDIANFFHTKVPLGTTPVYIRGAV
Ga0209380_105607642	3300027889	Soil	DVPLAPVSHGCVRIPMDIAAFFHKLVTVPGEPVYVR
Ga0209006_109797492	3300027908	Forest Soil	PVPLAPVSHGCVRIPMDIASFFHTLVRVPGEPVYIRD
Ga0268266_110591951	3300028379	Switchgrass Rhizosphere	HGCIRIPMDIAAFFHKLVYVNEQKGTPIYIRGRVPGT
Ga0302221_101371382	3300028806	Palsa	DIPVPLQPVSHGCVRIPMDIADFFHKLIHISQTHGTPIYIRG
Ga0302235_102884951	3300028877	Palsa	PLAPVSHGCVRIPMDVAAFFHTLVHIPGEPVIVRR
Ga0308309_100850151	3300028906	Soil	DVPLAPVSHGCVRIPMDIAQFFHKLVKIPGEPVIIRRP
Ga0308309_106607202	3300028906	Soil	TDVPLAPVSHGCVRIPMDIANFFHTLVKVPGEPVIIRR
Ga0308309_107493872	3300028906	Soil	VPLEPVSHGCVRIPMDIAAFFHTLVKVPGEPVYIRR
Ga0308309_111619311	3300028906	Soil	YAIHGDVPVPLAAVSHGCVRIPMDIAAFFHKLVHVNETNGTPVYIRGRVGS
Ga0308309_113599291	3300028906	Soil	TDVPLAPVSHGCIRIPMDIAAFFHTLVKVPGEPVIIRR
Ga0311362_108930631	3300029913	Bog	GDTDVPLQPVSHGCVRVPMDIAAFFHTLVKTPGTPVYIYN
Ga0302183_102082202	3300030509	Palsa	GDTDVPLAPVSHGCVRIPMDIAAFFHTLVHIPGEPVIVRR
Ga0265316_102240781	3300031344	Rhizosphere	GGVPLNPVSHGCVRIPYDIAQFFHQLVRTRGTPVYIY
Ga0318516_106816571	3300031543	Soil	HGDTDVPLVPVSHGCIRIPMDIAVFFHKLVMIPGEPVIIRR
Ga0318528_104331242	3300031561	Soil	TYVPVNPVSHGCVRIPMDIAAFFHTMVRTPGTPVYIYR
Ga0318573_100226951	3300031564	Soil	PFYPDSHGCVRVPMDIANIFHKLVRIPGTPVYLRG
Ga0318574_100137051	3300031680	Soil	PFYPASHGCVRIPMDIANFFHKLVKIPGTPVYIRG
Ga0310686_1083501011	3300031708	Soil	HGDTYVPLAPVSHGCVRIPMDVANIYPGLVPTSGIPVYVRSNG
Ga0307476_113156412	3300031715	Hardwood Forest Soil	VPLQPASHGCVRIPMDIAAFFHTLVPTPGTPVYIRR
Ga0307474_107490851	3300031718	Hardwood Forest Soil	DTDVPLAPVSHGCVRIPMDIAAFFHTLVKVPGEPVIIRR
Ga0318554_104240881	3300031765	Soil	VPLRAASHGCVRIPMDIAAFFYKLVPTPGTPVYIRG
Ga0318554_104653162	3300031765	Soil	IHGDTYVPVNPVSRGCVRIPMDIAAFFHTMVRTPGTPVYIYR
Ga0318521_109089072	3300031770	Soil	TYVPVNPVSHGCIRIPMDIAAFFHTMVKTPGTEVFVYK
Ga0318568_102927962	3300031819	Soil	IHGDTYVPLQPVSHGCVRIPMDVAAFFHTLISTPGTPVYIRG
Ga0310917_103074071	3300031833	Soil	FFIGTAFAIHGDTDVPLVPVSHGCIRIPMDIAVFFHKLVMIPGEPVIIRR
Ga0306925_110091432	3300031890	Soil	IHGDTDVPLRPRSHGCVRIPLDIAAFFHTLVPTPGTPIYIRS
Ga0306921_107064851	3300031912	Soil	DTDVPLAPVSHGCVRIPMDIAAFFHTLVKIPGEPVIIRR
Ga0306921_112454531	3300031912	Soil	PLRPASHGCVRIPMDIAAFFHTLVPTPGTPVYIRS
Ga0318531_101335681	3300031981	Soil	YNTSVPFYPDSHGCVRIPMDIANFFHKLVKIPGTPVYIRG
Ga0306922_103584971	3300032001	Soil	PLAPVSHGCVRVPMDIAAFFHKLVKIPGEPVIIRRP
Ga0318562_104763941	3300032008	Soil	HVPLRPASHGCVRIPMDIAAFFHTLVPTPGTPVYIRS
Ga0318563_107990201	3300032009	Soil	IHGDTYVPLAPVSHGCVRIPMDIAAFFHKLVKIPGEPVYIR
Ga0318559_105452351	3300032039	Soil	HGDTYVPVNPVSHGCVRIPMDIAAFFHTMVRTPGTPVYIYR
Ga0318549_104192972	3300032041	Soil	HGDTYVPLAPVSHGCVRIPMDIAAFFHKLVKIPGEPVYIR
Ga0318575_106235821	3300032055	Soil	ETDVPLAPVSHGCIRIPMDIAAFFHTLVKIPGEPVIIRR
Ga0318553_101092643	3300032068	Soil	IHGDTYVPLAPVSHGCVRIPMDIAAFFHKLVKVPGEPVYLR
Ga0318577_101555421	3300032091	Soil	QVPLRPASHGCVRIPIDVAAFFHTLIPTSGTPVYIRH
Ga0307471_1010144131	3300032180	Hardwood Forest Soil	DVPLAPVSHGCVRIPMDIANFFHKLVKVPGERVYIR
Ga0335079_117157281	3300032783	Soil	PVSHGCVRIPMDVSAFFHKLVHLSPTHGTPIDIRG
Ga0335080_110886891	3300032828	Soil	GDTDVPLAPVSHGCVRIPMDIAAFFHKLVKVPGEPVYIR
Ga0335081_102266161	3300032892	Soil	GDTDVPVQPVSHGCVRIPMDVAGIFPGLVPANGIPVYVRANG
Ga0335081_114708692	3300032892	Soil	AFAIHGETDVPLAPVSHGCVRIPMDIAAFFHKLVRIPGEPVYIR
Ga0335072_110581001	3300032898	Soil	IHGDIPVPLQAVSHGCVRIPMFIANFFHKLVYVNETKGTPIYIRGHVAGT
Ga0335083_101760723	3300032954	Soil	DVPVNPVSHGCIRIPMDIAAFFHTMVKTPGTEVFVYK
Ga0335083_102666481	3300032954	Soil	DTDVPLAPVSHGCVRIPMDIAAFFHKLIKVPGEPVYIR
Ga0335073_102726831	3300033134	Soil	GDTDVPVNPVSHGCIRIPMDIAAFFHTMVKTPGTEVFVYK
Ga0335073_105953201	3300033134	Soil	HGDIPVPLQPVSHGCVRIPMDIAAFFHTLIKVPGEPVYIRR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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