Metagenome / Metatranscriptome Family F055535

Basic Information
Family ID	F055535
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	46 residues
Representative Sequence	MALVKVSRLTETPDHYDSVKDFIAYGAIYRTVLEAVQDQNFEWKE
Number of Associated Samples	84
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	87.68 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (84.058 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (27.536 % of family members)
Environment Ontology (ENVO)	Unclassified (65.942 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (47.101 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. 1B570J29624_1053781 2B570J40625_1008336681 3B570J40625_1008930931 4Ga0065166_100611211 5Ga0068876_105149512 6Ga0078894_103800605 7Ga0078894_114187981 8Ga0079957_10494671 9Ga0079957_10518397 10Ga0079957_10737957 11Ga0079957_13170212 12Ga0075464_103189681 13Ga0075464_105300322 14Ga0075464_108818712 15Ga0070748_11965532 16Ga0070748_13280682 17Ga0099851_11943271 18Ga0105746_13269111 19Ga0105747_11051612 20Ga0114340_10814591 21Ga0114347_10099781 22Ga0114336_12091891 23Ga0114353_10884271 24Ga0114353_12790841 25Ga0114363_10493521 26Ga0114363_10777171 27Ga0114363_10916343 28Ga0114363_11190341 29Ga0114363_11342062 30Ga0114363_11721881 31Ga0114363_12088731 32Ga0114363_12277991 33Ga0114364_10852211 34Ga0114880_10417445 35Ga0114880_10789061 36Ga0114880_10814684 37Ga0114880_10916331 38Ga0114880_11048371 39Ga0114880_11684111 40Ga0114880_12559401 41Ga0105098_101051591 42Ga0114980_101758541 43Ga0114968_100546061 44Ga0114977_103346071 45Ga0114978_108675881 46Ga0105102_106338652 47Ga0105097_102226771 48Ga0105096_104895691 49Ga0114979_102013843 50Ga0114974_101355913 51Ga0114974_103343751 52Ga0114976_102233103 53Ga0129333_102913104 54Ga0129333_104823293 55Ga0129324_101445693 56Ga0129324_101498253 57Ga0129336_102467151 58Ga0133913_134028621 59Ga0157498_10406421 60Ga0157498_10562082 61Ga0157602_12503802 62Ga0157615_13885041 63Ga0164293_103907571 64Ga0164293_109452091 65Ga0164292_104065941 66Ga0181357_11314683 67Ga0181349_13131341 68Ga0181346_10465551 69Ga0181346_12134142 70Ga0181346_12804581 71Ga0187845_12461492 72Ga0211729_109313531 73Ga0208232_10172194 74Ga0208364_10180053 75Ga0208855_10281902 76Ga0208485_10703442 77Ga0222712_100811118 78Ga0222712_107807311 79Ga0209297_11558553 80Ga0209134_101241633 81Ga0209500_104500112 82Ga0209990_101923423 83Ga0209254_106913872 84Ga0209253_108005631 85Ga0209298_100453286 86Ga0209298_100751223 87Ga0315907_100993717 88Ga0315907_101219641 89Ga0315907_104341734 90Ga0315900_101013287 91Ga0315909_102071211 92Ga0315909_103115754 93Ga0315909_109682701 94Ga0315904_101889581 95Ga0315904_106466403 96Ga0315278_122377162 97Ga0315906_101208118 98Ga0315906_102368855 99Ga0315906_110362391 100Ga0315902_101804111 101Ga0315902_101941146 102Ga0315902_106586831 103Ga0334982_0226226_3_131 104Ga0334994_0372544_122_253 105Ga0334994_0535479_35_172 106Ga0334994_0542797_54_185 107Ga0334979_0278577_1_126 108Ga0334986_0373181_524_655 109Ga0334998_0232729_1_111 110Ga0334987_0257979_1_135 111Ga0334987_0616615_3_110 112Ga0334995_0085370_3_113 113Ga0334995_0105245_2010_2129 114Ga0334995_0748944_12_143 115Ga0335019_0461045_1_126 116Ga0310127_049571_58_195 117Ga0310127_305798_53_190 118Ga0310130_0178582_54_191 119Ga0335010_0149420_1_120 120Ga0335010_0210369_967_1098 121Ga0335010_0224575_894_1031 122Ga0335010_0228145_1_117 123Ga0335010_0331233_731_856 124Ga0335012_0388936_3_119 125Ga0335027_0143532_1_138 126Ga0335029_0547692_478_609 127Ga0335031_0234872_26_157 128Ga0335036_0408400_754_870 129Ga0335036_0669184_463_600 130Ga0335051_0142441_1101_1226 131Ga0335051_0357261_427_561 132Ga0335066_0336276_53_184 133Ga0335060_0063299_2192_2299 134Ga0335060_0242237_901_1008 135Ga0335060_0532676_440_598 136Ga0335013_0280285_952_1068 137Ga0335039_0663264_78_218 138Ga0335048_0072536_2018_2143
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. 1B570J29624_1053781 2B570J40625_1008930931 3Ga0065166_100611211 4Ga0068876_105149512 5Ga0105747_11051612 6Ga0114340_10814591 7Ga0114363_12277991 8Ga0157615_13885041 9Ga0335060_0063299_2192_2299
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. 1B570J29624_1053781 2B570J40625_1008930931 3Ga0065166_100611211 4Ga0068876_105149512 5Ga0105747_11051612 6Ga0114340_10814591 7Ga0114363_12277991 8Ga0157615_13885041 9Ga0335060_0063299_2192_2299
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.33% β-sheet: 0.00% Coil/Unstructured: 46.67%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01844	HNH	6.52
PF09723	Zn-ribbon_8	6.52
PF01464	SLT	1.45
PF00145	DNA_methylase	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.72

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	3.62 %
Unclassified	root	N/A	4.35 %
Viruses	superkingdom	All Organisms → Viruses	92.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.62 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	84.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.97 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	84.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.17 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.97 %
Unclassified	root	N/A	4.35 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	84.06 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	84.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.97 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	84.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.97 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.97 %
Unclassified	root	N/A	4.35 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	84.06 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002363\|B570J29624_105378	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	782	Open in IMG/M
3300002835\|B570J40625_100833668	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	806	Open in IMG/M
3300002835\|B570J40625_100893093	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	770	Open in IMG/M
3300004112\|Ga0065166_10061121	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1282	Open in IMG/M
3300005527\|Ga0068876_10514951	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	656	Open in IMG/M
3300005662\|Ga0078894_10380060	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1277	Open in IMG/M
3300005662\|Ga0078894_11418798	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	579	Open in IMG/M
3300005805\|Ga0079957_1049467	All Organisms → cellular organisms → Bacteria	2587	Open in IMG/M
3300005805\|Ga0079957_1051839	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300005805\|Ga0079957_1073795	All Organisms → Viruses → Predicted Viral	1958	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.83%
Terrestrial	Environmental → Terrestrial	2.17%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.17%
Freshwater	Environmental → Aquatic → Freshwater	86.96%
Marine	Environmental → Aquatic → Marine	10.87%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	9.42%
Lake	Environmental → Aquatic → Freshwater → Lake	58.70%
Lentic	Environmental → Aquatic → Freshwater → Lentic	14.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.90%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	10.87%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.45%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.62%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.45%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	57.97%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	10.87%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	9.42%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.45%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.35%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.45%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.45%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	2.17%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	27.54%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	10.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.62%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.45%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.45%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.42%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.97%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.07%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.90%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.62%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	10.14%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	1.45%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	2.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.72%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002363	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M

Showing 1 to 10 of 84 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29624_1053781	3300002363	Freshwater	AYLDFPITPHQAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
B570J40625_1008336681	3300002835	Freshwater	QAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
B570J40625_1008930931	3300002835	Freshwater	MALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0065166_100611211	3300004112	Freshwater Lake	VKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0068876_105149512	3300005527	Freshwater Lake	TPDHYDSIKDFVAYGAIYRSVLEAVQDQDFEWKE*
Ga0078894_103800605	3300005662	Freshwater Lake	SRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0078894_114187981	3300005662	Freshwater Lake	RLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0079957_10494671	3300005805	Lake	LTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0079957_10518397	3300005805	Lake	CMALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0079957_10737957	3300005805	Lake	CMALVKVSRLTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE*
Ga0079957_13170212	3300005805	Lake	SAYLDFPITPHQAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVMDDTFEWEDK*
Ga0075464_103189681	3300006805	Aqueous	PITPHQAALCMALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0075464_105300322	3300006805	Aqueous	KVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0075464_108818712	3300006805	Aqueous	LVKVSRLTETPDHEDSIKDFIAYGAVYKTVLDAVKDDSWDE*
Ga0070748_11965532	3300006920	Aqueous	LCMALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQNFEWKE*
Ga0070748_13280682	3300006920	Aqueous	VSRLTETPDHYDSVKDFIAYGALYGTVLEAVQDQDFEWKE*
Ga0099851_11943271	3300007538	Aqueous	ETPDHYDSVKDFIAYGAIYRNVLEAVQDEDFEWKE*
Ga0105746_13269111	3300007973	Estuary Water	LDFPITPHQAALWMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0105747_11051612	3300007974	Estuary Water	WSAYLDFPIMPHQEALCMALIKVSRLTETPTHDDSIKDLIAYGALYKTILDAETDADFGWEE*
Ga0114340_10814591	3300008107	Freshwater, Plankton	VALCMALVKVSRLTETPDHEDSIKDFIAYGAVYKTVLDAVKDESWEDE*
Ga0114347_10099781	3300008114	Freshwater, Plankton	ESPDHYDSIKDFVAYGSIYRTVLEAVQDPDFEWKE*
Ga0114336_12091891	3300008261	Freshwater, Plankton	ALVKVSRLTETPDHEDSIKDFIAYGAVYKTVLDAVKDDSWEDQ*
Ga0114353_10884271	3300008264	Freshwater, Plankton	LDFPITPHQAALCMALVKVSRLTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE*
Ga0114353_12790841	3300008264	Freshwater, Plankton	LDFPITPHQAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYNTVLEAVKDDQFEWGDK*
Ga0114363_10493521	3300008266	Freshwater, Plankton	LTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE*
Ga0114363_10777171	3300008266	Freshwater, Plankton	DYPITPHQAALCMALVKVSRLTETPDHYDSVKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0114363_10916343	3300008266	Freshwater, Plankton	LCMALVKVSRLSETPDHEDSIKDFIAYGSVYKTVLDAVKDENWEDQ*
Ga0114363_11190341	3300008266	Freshwater, Plankton	DFPITPHQAALCMALVKVSRLTETPDHYDSVKDFIAYGAIYRTVLEAVQDDDFEWKE*
Ga0114363_11342062	3300008266	Freshwater, Plankton	LCMALVKVSRLSETPDHEDSIKDFIAYGSVYKTVLDAVKDENWED*
Ga0114363_11721881	3300008266	Freshwater, Plankton	HQAALCMALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0114363_12088731	3300008266	Freshwater, Plankton	DYPITPHQAALCMALVKVSRLTETPDHYDSVKDFVAYGAIYRTVLEAVQDQNFEWKE*
Ga0114363_12277991	3300008266	Freshwater, Plankton	LSETSDHYDSIKDFIAYGAVYNTVLEAVKDDQFEWGDK*
Ga0114364_10852211	3300008267	Freshwater, Plankton	AYLDFPITPHQAALCMALVKVSRLTETPDHEDSIKDFIAYGAVYKTVLDAVKDDSWDE*
Ga0114880_10417445	3300008450	Freshwater Lake	QAALCMALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0114880_10789061	3300008450	Freshwater Lake	ITPHQAALCMALVKVSRLTETPDHYDSVKDFIAYGAIYRTVLEAVQDDDFEWKE*
Ga0114880_10814684	3300008450	Freshwater Lake	DYPITPHQAALCMALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0114880_10916331	3300008450	Freshwater Lake	TETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE*
Ga0114880_11048371	3300008450	Freshwater Lake	ALCMALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0114880_11684111	3300008450	Freshwater Lake	ALVKVSRLSETPDHYDSIKDFIAYGSVYNTVLEAVKDDQFEWGDK*
Ga0114880_12559401	3300008450	Freshwater Lake	LDYPITPHQAALCMALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0105098_101051591	3300009081	Freshwater Sediment	VSRLTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE*
Ga0114980_101758541	3300009152	Freshwater Lake	AALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVKDENWED*
Ga0114968_100546061	3300009155	Freshwater Lake	MALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0114977_103346071	3300009158	Freshwater Lake	PHQAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0114978_108675881	3300009159	Freshwater Lake	KVSRLTETPDHADSIKDFIAYGAVYKTVLDAVKDENWED*
Ga0105102_106338652	3300009165	Freshwater Sediment	LCMALVKVSRLTESPDHYDSVKDFIAYGSIYRTVLEAEQDSDFDWKE*
Ga0105097_102226771	3300009169	Freshwater Sediment	LCMALVKVSRLTETPDHYDSVKDFIAYGAIYRTVLEAEQDSDFDWRE*
Ga0105096_104895691	3300009170	Freshwater Sediment	TPDHYDSVKDFIAYGAIYRTVLEAEQDSDFDWRE*
Ga0114979_102013843	3300009180	Freshwater Lake	ALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVKDENWED*
Ga0114974_101355913	3300009183	Freshwater Lake	HQAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0114974_103343751	3300009183	Freshwater Lake	FPITPHQVALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0114976_102233103	3300009184	Freshwater Lake	LVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0129333_102913104	3300010354	Freshwater To Marine Saline Gradient	DFPITPHQAALCMALVKVSRLTETPDHYDSVKDFIAYGAIYRTVLEAVQDQDFEWKE*
Ga0129333_104823293	3300010354	Freshwater To Marine Saline Gradient	FPITPHQAALCMALVKVSRLTETPDHYDSVKDFIAYGALYRTVLEAVQDQDFEWKE*
Ga0129324_101445693	3300010368	Freshwater To Marine Saline Gradient	ALCMALVKVSRLTETPDHYDSVKDFIAYGAIYRNVLEAVQDKDFEWKE*
Ga0129324_101498253	3300010368	Freshwater To Marine Saline Gradient	ALCMALVKVSRLTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE*
Ga0129336_102467151	3300010370	Freshwater To Marine Saline Gradient	RLTETSDHYDSVKDFIAYGAIYRTVLEAVQDDDFEWKE*
Ga0133913_134028621	3300010885	Freshwater Lake	LVKVSRLAETPDHYDSIKDFIAYGSVYKTVLDAVKDENWED*
Ga0157498_10406421	3300012666	Freshwater, Surface Ice	VSRLSETPDHYDSIKDFIAYGSVYKTVLDAVKDENWED*
Ga0157498_10562082	3300012666	Freshwater, Surface Ice	ITPHQAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED*
Ga0157602_12503802	3300012730	Freshwater	SPDHYDSVKDLVAYSSIYRTVLEAVQDKDFEWKE*
Ga0157615_13885041	3300012734	Freshwater	PHQAALCMALVKVSRLSESPDHYDSVKDLVAYSSIYRTVLEAVQDKDFEWKE*
Ga0164293_103907571	3300013004	Freshwater	RLSETPDHEDSIKDFIAYGSVYKTVLDAVKDENWED*
Ga0164293_109452091	3300013004	Freshwater	ITPHQAALCMALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE*
Ga0164292_104065941	3300013005	Freshwater	HQAALCMALVKVSRLSETPDHEDSIKDFIAYGSVYKTVLDAVKDENWED*
Ga0181357_11314683	3300017777	Freshwater Lake	AYLDFPITPHQAALCMALVKVSRLSETPDHEDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0181349_13131341	3300017778	Freshwater Lake	QAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED
Ga0181346_10465551	3300017780	Freshwater Lake	IMPHQAALCMALIKVSRLTETPTHDDSIKDLIAYGALYKTILDAETDADFGWEE
Ga0181346_12134142	3300017780	Freshwater Lake	LCMALVKVSRLSETSDHYDSIKDFIAYGAVYNTVLEAVKDDQFEWGDK
Ga0181346_12804581	3300017780	Freshwater Lake	IMPHQAALCMALIKVSRLTETPTHDDSIKDLIAYGALYKTILDAETDADFEWEE
Ga0187845_12461492	3300018815	Freshwater	VSRLSETPDHYDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0211729_109313531	3300020172	Freshwater	VSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED
Ga0208232_10172194	3300020527	Freshwater	KVSRLTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE
Ga0208364_10180053	3300020533	Freshwater	MALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED
Ga0208855_10281902	3300020553	Freshwater	LCMALVKVSRLSETPDHEDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0208485_10703442	3300020573	Freshwater	LVKVSRLSETSDHYDSIKDFIAYGAVYNTVLEAVKDDQFEWGDK
Ga0222712_100811118	3300021963	Estuarine Water	ALCMALVKVSRLTETPDHDDSIKDFIAYGAVYKTVLDAVKDESWDQE
Ga0222712_107807311	3300021963	Estuarine Water	AALCMALVKVSRLSETSDHYDSIKDFIAYGAVYNTVLEAVKDDQFEWGDK
Ga0209297_11558553	3300027733	Freshwater Lake	LVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED
Ga0209134_101241633	3300027764	Freshwater Lake	QAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKSVLDAVQDENWED
Ga0209500_104500112	3300027782	Freshwater Lake	PHQAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0209990_101923423	3300027816	Freshwater Lake	LDFPITPHQAALCMALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE
Ga0209254_106913872	3300027897	Freshwater Lake Sediment	MALVKVSRLAETPDHYDSIKDFIAYGAVYNTVLEAVKDDQFEWGDK
Ga0209253_108005631	3300027900	Freshwater Lake Sediment	YLDFPITPHQAALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED
Ga0209298_100453286	3300027973	Freshwater Lake	VKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0209298_100751223	3300027973	Freshwater Lake	AALCMALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0315907_100993717	3300031758	Freshwater	HQAALCMALVKVSRLTETPDHYDSVKDFIAYGALYRTVLEAVQDQDFEWKE
Ga0315907_101219641	3300031758	Freshwater	YLDFPITPHQAALCMALVKVSRLTESPDHYDSVKDFIAYGSIYRSVLEAVQDNDFEWKE
Ga0315907_104341734	3300031758	Freshwater	ALCMALVKVSRLTETPDHYDSVKDFIAYGAIYRTVLEAVQDQDFEWKE
Ga0315900_101013287	3300031787	Freshwater	LDYPITPHQAALCMALVKVSRLTETPDHYDSVKDFVAYGAIYRTVLEAVQDQDFEWKE
Ga0315909_102071211	3300031857	Freshwater	VSRLTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE
Ga0315909_103115754	3300031857	Freshwater	LDFPITPHQAALCMALVKVSRLTETPDHYDSVKDFIAYGAIYRTVLEAVQDQDFEWKE
Ga0315909_109682701	3300031857	Freshwater	PPQAALCMALVKVSRLTESPDHYDSIKDFVAYGSIYRTVLEAVQDPDFEWKE
Ga0315904_101889581	3300031951	Freshwater	AYLDFPITPHQAALCMALVKVSRLTETPDHYDSVKDFIAYGAIYRTVLEAVQDDDFEWKE
Ga0315904_106466403	3300031951	Freshwater	LTETPDHYDSVKDFIAYGAIYRTVLEAVQDQDFEWKE
Ga0315278_122377162	3300031997	Sediment	QAALCMALIKVSRLTETPTHDDSIKDLIAYGALYKTILDAETDADFGWEE
Ga0315906_101208118	3300032050	Freshwater	AYLDFPITPHQAALCMALVKVSRLTETPDHYDSVKDFIAYGALYRTVLEAVQDQDFEWKE
Ga0315906_102368855	3300032050	Freshwater	DFPITPHQAALCMALVKVSRLTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE
Ga0315906_110362391	3300032050	Freshwater	DFPITPHQAALCMALVKVSRLTESPDHYDSVKDFIAYGSIYRSVLEAVQDNDFEWKE
Ga0315902_101804111	3300032093	Freshwater	LVKVSRLSETPDHHDSIKDFIAYGSVYKTVLDAVQDENWED
Ga0315902_101941146	3300032093	Freshwater	PHQAALCMALVKVSRLTETADHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE
Ga0315902_106586831	3300032093	Freshwater	HQAALCMALVKVSRLSETPDHEDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0334982_0226226_3_131	3300033981	Freshwater	ALVKVSRLSETPDHEDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0334994_0372544_122_253	3300033993	Freshwater	MALVKVSRLTETPDHEDSIKDFIAYGAVYKTVLDAVQDESWDQ
Ga0334994_0535479_35_172	3300033993	Freshwater	MALVKVSRLTETPDHYDSVKDFIAYGSIYRTVLEAEQDSEFDWKD
Ga0334994_0542797_54_185	3300033993	Freshwater	MALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0334979_0278577_1_126	3300033996	Freshwater	LVKVSRLSETPDHEDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0334986_0373181_524_655	3300034012	Freshwater	MALVKVSRLSETPDHEDSIKDFIAYGSVYKTVLDAVQDENWED
Ga0334998_0232729_1_111	3300034019	Freshwater	TETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE
Ga0334987_0257979_1_135	3300034061	Freshwater	MALVKVSRLTETPDHEDSIKDFIAYGAVYKTVLDAVKDESWEDQ
Ga0334987_0616615_3_110	3300034061	Freshwater	ETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE
Ga0334995_0085370_3_113	3300034062	Freshwater	RLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWED
Ga0334995_0105245_2010_2129	3300034062	Freshwater	SRLTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE
Ga0334995_0748944_12_143	3300034062	Freshwater	MALVKVSRLTETPDHEDSIKDFIAYGAVYKTVLDAVKDDSWDE
Ga0335019_0461045_1_126	3300034066	Freshwater	VKVSRLTETPDHEDSIKDFIAYGAVYKTVLDAVKDESWEDQ
Ga0310127_049571_58_195	3300034072	Fracking Water	MALVKVSRLTETPDHYDSVKDFIAYGAIYRTVLEAVQDQNFEWKE
Ga0310127_305798_53_190	3300034072	Fracking Water	MALVKVSRLTETPDHYDSVKDFIAYGALYRTVLEAVQDQDFEWKE
Ga0310130_0178582_54_191	3300034073	Fracking Water	MALVKVSRLTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE
Ga0335010_0149420_1_120	3300034092	Freshwater	SRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDQDFEWKE
Ga0335010_0210369_967_1098	3300034092	Freshwater	MALVKVSRLSETPDHDDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0335010_0224575_894_1031	3300034092	Freshwater	MALVKVSRLTESPDHYDSVKDFIAYGAIYRTVLEAEQDSEFDWKD
Ga0335010_0228145_1_117	3300034092	Freshwater	VSRLTETPDHEDSIKDFIAYGAVYKTVLDAVQDESWDQ
Ga0335010_0331233_731_856	3300034092	Freshwater	LVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVKDENWED
Ga0335012_0388936_3_119	3300034093	Freshwater	RLTETPDHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE
Ga0335027_0143532_1_138	3300034101	Freshwater	MALVKVSRLTETPDHYDSIKDFVAYGAIYRTVLEAVQDDDFEWKE
Ga0335029_0547692_478_609	3300034102	Freshwater	MALVKVSRLTETPDHQDSIKDFIAYGAVYKTVLDAVQDESWDQ
Ga0335031_0234872_26_157	3300034104	Freshwater	MALVKVSRLTETPDHEDSIKDFIAYGAVYKTVLDAVKDENWEE
Ga0335036_0408400_754_870	3300034106	Freshwater	VSRLTETPDHQDSIKDFIAYGAVYKTVLDAVKDESWDQ
Ga0335036_0669184_463_600	3300034106	Freshwater	MALVKVSRLTETPDHYDSVKDFIAYGSIYRTVLEAEQDADFDWKE
Ga0335051_0142441_1101_1226	3300034109	Freshwater	KVSRLTETPDHYDSVKDFIAYGAIYRTVLEAVQDQDFEWKE
Ga0335051_0357261_427_561	3300034109	Freshwater	MALVKVSRLSETPDHEDSIKDFIAYGSVYKTVLDAVKDENWEDK
Ga0335066_0336276_53_184	3300034112	Freshwater	MALVKVSRLSETPDHYDSIKDFIAYGSVYKTVLDAVQDENWEN
Ga0335060_0063299_2192_2299	3300034122	Freshwater	ESPDHYDSVKDFIAYGAIYRTVLEAEQDSEFDWKD
Ga0335060_0242237_901_1008	3300034122	Freshwater	ETPDHYDSVKDFIAYGSIYRTVLEAEQDADFDWKE
Ga0335060_0532676_440_598	3300034122	Freshwater	PHQAALCMALVKVSRLTETPDHYDSVKDFVAYGAIYRTVLEAVQDQDFEWKE
Ga0335013_0280285_952_1068	3300034284	Freshwater	RLTETPDHYDSVKDFVAYGAIYRTVLEAVQDQDFEWKE
Ga0335039_0663264_78_218	3300034355	Freshwater	MALVKVSRLTETPDHYDSIKDFIAYGAVYNTVLEAVKDDQFEWGDK
Ga0335048_0072536_2018_2143	3300034356	Freshwater	KVSRLTETPNHYDSVKDFIAYGAIYRNVLEAVQDQDFEWKE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055535

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences