Metagenome / Metatranscriptome Family F055503

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055503
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	68 residues
Representative Sequence	MLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG
Number of Associated Samples	102
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.88 %
% of genes near scaffold ends (potentially truncated)	27.54 %
% of genes from short scaffolds (< 2000 bps)	92.03 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.217 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (25.362 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.652 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 17.71% β-sheet: 0.00% Coil/Unstructured: 82.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF13202	EF-hand_5	2.17
PF00589	Phage_integrase	1.45
PF01068	DNA_ligase_A_M	1.45
PF04586	Peptidase_S78	1.45
PF00036	EF-hand_1	0.72
PF00753	Lactamase_B	0.72
PF01914	MarC	0.72
PF13795	HupE_UreJ_2	0.72
PF02776	TPP_enzyme_N	0.72
PF00528	BPD_transp_1	0.72
PF00160	Pro_isomerase	0.72
PF00211	Guanylate_cyc	0.72
PF13180	PDZ_2	0.72
PF00578	AhpC-TSA	0.72
PF01641	SelR	0.72
PF01596	Methyltransf_3	0.72
PF12680	SnoaL_2	0.72
PF03703	bPH_2	0.72
PF00072	Response_reg	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.45
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.45
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	1.45
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.72
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.72
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.72
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.72
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.72
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
All Organisms	root	All Organisms	34.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
cellular organisms	root	All Organisms → cellular organisms	34.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	7.97 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.62 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	1.45 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.72 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.72 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.90 %
Kaistia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia	1.45 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.72 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.72 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.97 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.45 %
Kaistia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia	1.45 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.72 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.72 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.97 %
Bradyrhizobium sp. G127	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. G127	1.45 %
Kaistia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia	1.45 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	0.72 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.72 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.22 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.97 %
Bradyrhizobium sp. G127	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. G127	1.45 %
Kaistia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia	1.45 %
Rhodococcus sp. UNC363MFTsu5.1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. UNC363MFTsu5.1	0.72 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.72 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_66504	Not Available	664	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104804156	Not Available	760	Open in IMG/M
3300000891\|JGI10214J12806_11693181	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300004463\|Ga0063356_103772015	Not Available	653	Open in IMG/M
3300004481\|Ga0069718_14704288	Not Available	974	Open in IMG/M
3300005105\|Ga0066812_1000314	Not Available	1604	Open in IMG/M
3300005169\|Ga0066810_10056556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	780	Open in IMG/M
3300005332\|Ga0066388_100476238	Not Available	1887	Open in IMG/M
3300005332\|Ga0066388_101210723	Not Available	1292	Open in IMG/M
3300005332\|Ga0066388_102472409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	943	Open in IMG/M
3300005332\|Ga0066388_103800829	Not Available	770	Open in IMG/M
3300005332\|Ga0066388_108367381	Not Available	516	Open in IMG/M
3300005345\|Ga0070692_10371830	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005347\|Ga0070668_101583322	Not Available	600	Open in IMG/M
3300005353\|Ga0070669_100744817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	830	Open in IMG/M
3300005355\|Ga0070671_101321320	Not Available	636	Open in IMG/M
3300005438\|Ga0070701_10348360	Not Available	924	Open in IMG/M
3300005441\|Ga0070700_100779168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. UNC363MFTsu5.1	768	Open in IMG/M
3300005444\|Ga0070694_100605304	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300005445\|Ga0070708_101878250	Not Available	555	Open in IMG/M
3300005456\|Ga0070678_101003990	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005458\|Ga0070681_10927224	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300005459\|Ga0068867_100406140	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300005614\|Ga0068856_100520569	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300005617\|Ga0068859_100558458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia	1239	Open in IMG/M
3300005713\|Ga0066905_100169412	Not Available	1597	Open in IMG/M
3300005764\|Ga0066903_100852381	Not Available	1640	Open in IMG/M
3300005764\|Ga0066903_100908923	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300005764\|Ga0066903_105812015	Not Available	648	Open in IMG/M
3300006852\|Ga0075433_10615667	Not Available	953	Open in IMG/M
3300006852\|Ga0075433_10681114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. G127	901	Open in IMG/M
3300006854\|Ga0075425_100073162	All Organisms → cellular organisms → Bacteria	3862	Open in IMG/M
3300006904\|Ga0075424_100355473	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300007076\|Ga0075435_101891942	Not Available	524	Open in IMG/M
3300009094\|Ga0111539_10364152	Not Available	1683	Open in IMG/M
3300009094\|Ga0111539_11236914	Not Available	867	Open in IMG/M
3300009094\|Ga0111539_11649253	Not Available	744	Open in IMG/M
3300009094\|Ga0111539_12867248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. G127	558	Open in IMG/M
3300009156\|Ga0111538_11105290	Not Available	1002	Open in IMG/M
3300009176\|Ga0105242_10687608	Not Available	999	Open in IMG/M
3300009553\|Ga0105249_11118340	Not Available	858	Open in IMG/M
3300009792\|Ga0126374_10607651	Not Available	808	Open in IMG/M
3300009792\|Ga0126374_11171516	Not Available	614	Open in IMG/M
3300010043\|Ga0126380_10360522	Not Available	1062	Open in IMG/M
3300010047\|Ga0126382_12222537	Not Available	528	Open in IMG/M
3300010047\|Ga0126382_12229369	Not Available	528	Open in IMG/M
3300010154\|Ga0127503_11223101	Not Available	888	Open in IMG/M
3300010358\|Ga0126370_12033786	Not Available	562	Open in IMG/M
3300010360\|Ga0126372_10030644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3368	Open in IMG/M
3300010362\|Ga0126377_11255984	Not Available	812	Open in IMG/M
3300010362\|Ga0126377_11450341	Not Available	760	Open in IMG/M
3300010366\|Ga0126379_12158247	Not Available	658	Open in IMG/M
3300010371\|Ga0134125_11223049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia	821	Open in IMG/M
3300010375\|Ga0105239_11382824	Not Available	812	Open in IMG/M
3300010396\|Ga0134126_11270201	Not Available	816	Open in IMG/M
3300010398\|Ga0126383_10119537	Not Available	2398	Open in IMG/M
3300010398\|Ga0126383_13071149	Not Available	545	Open in IMG/M
3300012473\|Ga0157340_1022906	Not Available	539	Open in IMG/M
3300012507\|Ga0157342_1052453	Not Available	578	Open in IMG/M
3300012948\|Ga0126375_11425105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	588	Open in IMG/M
3300012948\|Ga0126375_11895391	Not Available	523	Open in IMG/M
3300012951\|Ga0164300_10005259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3675	Open in IMG/M
3300012951\|Ga0164300_10008308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3145	Open in IMG/M
3300012951\|Ga0164300_10080785	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300012955\|Ga0164298_10006511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4268	Open in IMG/M
3300012957\|Ga0164303_11475677	Not Available	512	Open in IMG/M
3300012958\|Ga0164299_10979572	Not Available	621	Open in IMG/M
3300012961\|Ga0164302_10048280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2094	Open in IMG/M
3300012961\|Ga0164302_11113045	Not Available	624	Open in IMG/M
3300012971\|Ga0126369_10027579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4635	Open in IMG/M
3300012971\|Ga0126369_13678460	Not Available	502	Open in IMG/M
3300012984\|Ga0164309_10541685	Not Available	899	Open in IMG/M
3300012984\|Ga0164309_10739109	Not Available	785	Open in IMG/M
3300012984\|Ga0164309_10943212	Not Available	707	Open in IMG/M
3300012985\|Ga0164308_10093105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2096	Open in IMG/M
3300012985\|Ga0164308_10473161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1042	Open in IMG/M
3300012985\|Ga0164308_10530112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	990	Open in IMG/M
3300012985\|Ga0164308_10706327	Not Available	870	Open in IMG/M
3300012986\|Ga0164304_10094747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1764	Open in IMG/M
3300012986\|Ga0164304_10136956	Not Available	1522	Open in IMG/M
3300012987\|Ga0164307_10016463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3727	Open in IMG/M
3300012988\|Ga0164306_11856529	Not Available	524	Open in IMG/M
3300012988\|Ga0164306_11880452	Not Available	520	Open in IMG/M
3300012989\|Ga0164305_10501584	Not Available	955	Open in IMG/M
3300013306\|Ga0163162_12187145	Not Available	635	Open in IMG/M
3300013307\|Ga0157372_10395167	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300013308\|Ga0157375_10670202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1192	Open in IMG/M
3300014969\|Ga0157376_11498528	Not Available	707	Open in IMG/M
3300015371\|Ga0132258_10613254	Not Available	2733	Open in IMG/M
3300015371\|Ga0132258_11321212	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300015371\|Ga0132258_11872045	Not Available	1511	Open in IMG/M
3300015372\|Ga0132256_102003550	Not Available	685	Open in IMG/M
3300015372\|Ga0132256_102380743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300015373\|Ga0132257_101233636	Not Available	947	Open in IMG/M
3300015374\|Ga0132255_101126356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1180	Open in IMG/M
3300017944\|Ga0187786_10223548	Not Available	730	Open in IMG/M
3300018028\|Ga0184608_10407584	Not Available	590	Open in IMG/M
3300018081\|Ga0184625_10504155	Not Available	610	Open in IMG/M
3300021478\|Ga0210402_10882436	Not Available	821	Open in IMG/M
3300022507\|Ga0222729_1017698	Not Available	817	Open in IMG/M
3300025901\|Ga0207688_10406901	Not Available	844	Open in IMG/M
3300025916\|Ga0207663_10288532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1221	Open in IMG/M
3300025937\|Ga0207669_10092098	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300025938\|Ga0207704_10284149	Not Available	1259	Open in IMG/M
3300025961\|Ga0207712_11782152	Not Available	552	Open in IMG/M
3300025972\|Ga0207668_11554578	Not Available	597	Open in IMG/M
3300025986\|Ga0207658_12177139	Not Available	503	Open in IMG/M
3300026075\|Ga0207708_10859043	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300026075\|Ga0207708_11059688	Not Available	706	Open in IMG/M
3300026118\|Ga0207675_100251554	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300027523\|Ga0208890_1032899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	786	Open in IMG/M
3300027876\|Ga0209974_10453204	Not Available	509	Open in IMG/M
3300027907\|Ga0207428_10962886	Not Available	601	Open in IMG/M
3300028587\|Ga0247828_10810585	Not Available	595	Open in IMG/M
3300028589\|Ga0247818_10407454	Not Available	917	Open in IMG/M
3300028592\|Ga0247822_10329483	Not Available	1174	Open in IMG/M
3300028809\|Ga0247824_10406700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	787	Open in IMG/M
3300031170\|Ga0307498_10035924	Not Available	1255	Open in IMG/M
3300031170\|Ga0307498_10073023	Not Available	993	Open in IMG/M
3300031469\|Ga0170819_15672801	Not Available	537	Open in IMG/M
3300031547\|Ga0310887_10407764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	802	Open in IMG/M
3300031720\|Ga0307469_10816499	Not Available	857	Open in IMG/M
3300031720\|Ga0307469_12254934	Not Available	531	Open in IMG/M
3300031820\|Ga0307473_11515527	Not Available	509	Open in IMG/M
3300031854\|Ga0310904_10152980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1342	Open in IMG/M
3300031854\|Ga0310904_10570090	Not Available	769	Open in IMG/M
3300031908\|Ga0310900_10157717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1546	Open in IMG/M
3300032075\|Ga0310890_11535687	Not Available	549	Open in IMG/M
3300032174\|Ga0307470_10286921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1109	Open in IMG/M
3300032179\|Ga0310889_10540940	Not Available	595	Open in IMG/M
3300032180\|Ga0307471_100617444	Not Available	1244	Open in IMG/M
3300032180\|Ga0307471_102760541	Not Available	623	Open in IMG/M
3300032180\|Ga0307471_103458262	Not Available	559	Open in IMG/M
3300032205\|Ga0307472_100317832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1261	Open in IMG/M
3300032261\|Ga0306920_102162458	Not Available	775	Open in IMG/M
3300033551\|Ga0247830_10557116	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300033551\|Ga0247830_11414333	Not Available	556	Open in IMG/M
3300034192\|Ga0373896_040753	Not Available	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.12%
Host-Associated	Host-Associated	31.16%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.22%
Plants	Host-Associated → Plants	31.16%
Aquatic	Environmental → Aquatic	2.90%
Bioremediation	Engineered → Bioremediation	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.32%
Freshwater	Environmental → Aquatic → Freshwater	1.45%
Sediment	Environmental → Aquatic → Sediment	1.45%
Metal	Engineered → Bioremediation → Metal	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.45%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.72%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.72%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.45%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.72%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034192	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.3	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00875230	2199352025	Soil	MLSKTAIALVAASFALGFAALTPALANYAPCVENPAAKGCPGEINQNTNANSYKGAEHQTRHMTRHHG
INPhiseqgaiiFebDRAFT_1048041562	3300000364	Soil	MFSKIAIALAAASFLSSATLTPAKANYAPCYENPNGPGCPGEVKQNMTTHSSRGAEHQTRQMIHHHG*
JGI10214J12806_116931813	3300000891	Soil	MLSKTAIALVTASFALGAAALTPAMANYASCVENPAAKGCPGEIKQNTAMPSYRGAEHQTRHTTRHHG*
Ga0063356_1037720152	3300004463	Arabidopsis Thaliana Rhizosphere	MFSKTAIGLAAALLVLAAGAFTPAMANYAPCYENPAAKGCPGEINQNTSAQRYRGAEHQMRSTT
Ga0069718_147042881	3300004481	Sediment	MFSKTAIALAAASFAVGAAALTPAMANYAPCVENPAGKGCPGEIKQNAATPSYRGAEHHPRSTTHHHG*
Ga0066812_10003143	3300005105	Soil	MFSKTAIALAAASLALGATAVTPATANYAPCYENPAATGCPGNYQVNQNTGAHSYKGAEHPTRHTIRHHG*
Ga0066810_100565562	3300005169	Soil	MFSKTAIALAAASLALGATAVTSATANYAPCYENPAATGCPGNYQVNQNTGAHSYKGAEHPTRHTIRHH
Ga0066388_1004762384	3300005332	Tropical Forest Soil	MFSKTTIALAAVSLAIIVGSFTPATANYAPCVENPAAKGCPGEINQPQSNTRGAEHPTVPATRHHHG*
Ga0066388_1012107232	3300005332	Tropical Forest Soil	MFSKTIALTIAAASFSIGDVTLTPAMANYAPCYENPNGPGCPGETKQNMTTHYYRGAEHQTRQMTHHHG*
Ga0066388_1024724092	3300005332	Tropical Forest Soil	MFSKTAIALAVASFAVGAVALTPAMANYAPCLENPAGPGCPGEIKNMTSHQHRGAAHPTVPATRHHHG*
Ga0066388_1038008292	3300005332	Tropical Forest Soil	MLTKTAIALAAASIAVGAFTIAPAMANYAPCVENPAAKGCPGEIKQPTAMSSYRGAEHQTRHTTRHHG*
Ga0066388_1083673812	3300005332	Tropical Forest Soil	MFSKTAIGLAAASFMVAAAAFTPVMANYAPCYENPAGKGCPGEINQNTSAQSHRGAEHQMPRT
Ga0070692_103718301	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MFSKTAIALAAASFAVGVAALSPAMANYAPCVENPAAKGCPGEIKQNAATPSYRGAEHHMRITTSHHG*
Ga0070668_1015833221	3300005347	Switchgrass Rhizosphere	KTAIALVAASFALDLVALTPAMANYAPCVENPAAKGCPGEINQNTNANSHRGAEHHTPHMTRHHG*
Ga0070669_1007448172	3300005353	Switchgrass Rhizosphere	MFSKTAIALAAVSFAVGAAALTPAMANYAPCVENPAGKGCPGEIKQNTATPSYRAEHHTRSTTHHHG*
Ga0070671_1013213202	3300005355	Switchgrass Rhizosphere	KTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG*
Ga0070701_103483602	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG*
Ga0070700_1007791681	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MFSKTAIALAAASFAVGVAALSPAMANYAPCVENPAAKGCPGEIKQNAATPSYRGAEHHPRSTTHHHG*
Ga0070694_1006053042	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MFSKTAIALAAASFAVGAAALTPAMANYAPCVENPAGKGCPGEIKQNTATPSYRAEHHTRSTTHHHG*
Ga0070708_1018782501	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG*
Ga0070678_1010039902	3300005456	Miscanthus Rhizosphere	MFSKTAIALAAASFAVGVAALSPAMANYAPCVENPAAKGCPGEIKQNAATPSYRGAEHHMRSTTSHHG*
Ga0070681_109272241	3300005458	Corn Rhizosphere	MFSKTAIALAAASFAVGVAALSPAMANYAPCVENPAGKGCPGEIKQNTATPSYRAEHHTRSTTHHHG*
Ga0068867_1004061401	3300005459	Miscanthus Rhizosphere	MFSKTAIALAAASFAVGVAALSPAMANYAPCVENPAAKGCPGEIKQNTATPSYRAEHHTRSTTHHHG*
Ga0068856_1005205692	3300005614	Corn Rhizosphere	MLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTTANSYKGAEHQTRHTTRHHG*
Ga0068859_1005584584	3300005617	Switchgrass Rhizosphere	MFSKTAIALAAASFAVGVAALSPAMANYAPCVENPAAKGCPGEIKQNAATPSYRGEEHHMRSTTSHHG*
Ga0066905_1001694124	3300005713	Tropical Forest Soil	MLSKTVIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEINQNTNANSYRGAEHQTRHVTHHRG*
Ga0066903_1008523813	3300005764	Tropical Forest Soil	MFSKTAIALVAALLAIVAGAFTPAAANYAPCVENPAAKGCPGEIDQPQQNARGAEHPTVPATRRHHG*
Ga0066903_1009089233	3300005764	Tropical Forest Soil	MFSKKAIALAVASFAVGAVALTPAMANYAPCLENPAGPGCPGEIKNMTSHQHKGAAHPTVPATRHHHG*
Ga0066903_1058120151	3300005764	Tropical Forest Soil	MFRKTTVALAAASLAIIAGAFTPATANYAPCVENPAAKGCPGEINQPQSNTRGAEHPTVPATRHHHG*
Ga0075433_106156673	3300006852	Populus Rhizosphere	LLAASFALGAAALSPAMANYAPCVENPAAKGCPGEIKQNSAMPSYRGAEHQTRHTTRHHG
Ga0075433_106811142	3300006852	Populus Rhizosphere	MFSKTAIGLAAALLVLAAGAFTPAMANYAPCYENPAAKGCPGEINQNTSAQSYRGAEHQMRSTTRHHG*
Ga0075425_1000731627	3300006854	Populus Rhizosphere	MLSKTAIALLAASFALGAAALSPAMANYAPCVENPAAKGCPGEIKQNSAMPSYRGAEHQTRHTTRHHG*
Ga0075424_1003554731	3300006904	Populus Rhizosphere	MFSKTAIGLAAALLVLAAGAFTPAMANYAPCYENPAAKGCPGEINQNTSAQRYRGAEHQMRSTTRHHG*
Ga0075435_1018919421	3300007076	Populus Rhizosphere	MLSKTAIALVTASFALGAAALTPAMANYASCVENPAAKGCPGEIKQNTAVPSYRGAEHQTRHT
Ga0111539_103641524	3300009094	Populus Rhizosphere	MFSKTAIALAAASFVVGAAALTPAMANYASCVENPAAKGCPGEIKQNTAMPSYRGAEHQTRHTIRHHG*
Ga0111539_112369142	3300009094	Populus Rhizosphere	MLSKTAIALLAASFALGAAALTPAMANYASCVENPAAKGCPGEIKQNTAVPSYRGAEHQTRHTTRHHG*
Ga0111539_116492531	3300009094	Populus Rhizosphere	MLSKTAIALAAASLAVGASAFTPAMANYAPCVEKPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG*
Ga0111539_128672482	3300009094	Populus Rhizosphere	LAAALLVLAAGAFTPAMANYAPCYENPAAKGCPGEINQNTSAQSYRGAEHQMRSTTRHHG
Ga0111538_111052902	3300009156	Populus Rhizosphere	MLTKTAIALAAASIAVGAAALTPAMANYAPCVENPSAKGCPGEMKQPANANSYKGAEHQTRHMPRHHG*
Ga0105242_106876081	3300009176	Miscanthus Rhizosphere	INDGGPVMLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG*
Ga0105249_111183403	3300009553	Switchgrass Rhizosphere	SDGINDGGPVMLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG*
Ga0126374_106076511	3300009792	Tropical Forest Soil	MFSKTAIALVAASLAIGAAAITPAMANYALCYENPAGPGCPGEIKQSTTSHYYRGAEHPTVPATRHHHG*
Ga0126374_111715162	3300009792	Tropical Forest Soil	MFSKTAIALAVASFAVGAVALTPAMANYAPCLENLAGPGCPGKIKNMTSHQHKGAAHPTVPATRHHHG*
Ga0126380_103605222	3300010043	Tropical Forest Soil	MFSKTAIGLAAASFMVAAAAFTPVMANYAPCYENPAGKGCPGEINQNTSAQSHRGAEHQMPRTHHHG*
Ga0126382_122225371	3300010047	Tropical Forest Soil	RRPVMLTKTAIALAAASIAVGAFTIAPAMANYAPCVENPAAKGCPGEIKQPTAMSSYRGAEHQTRHTTRHHG*
Ga0126382_122293692	3300010047	Tropical Forest Soil	MLSKTAIALAAASITVGAFAIAPAMANYAPCVENPSGPGCPGEIKQPMTHSNYYRSVERPTVPATRHYYHHG*
Ga0127503_112231011	3300010154	Soil	MFSKTAIALIAASLALGFAAPAMANYAPCVENPAAKGCPGEINQNTNANSYKGAEHPTVPATRHHHG*
Ga0126370_120337861	3300010358	Tropical Forest Soil	MFSKRAIALAVASFAVGAVALTPAMANYAPCLENPAGPGCPGEIKNMTSHQHKGAAHPTVPATRHHHG*
Ga0126372_100306443	3300010360	Tropical Forest Soil	MFSKTPIALVAASLAIGAAAITPAMANYAPCYENPAGPGCPGEIKQSTTSHYYRGAEHPTVPATRHHHG*
Ga0126377_112559842	3300010362	Tropical Forest Soil	MLTKTAIALAAASIAVGAFTIAPAMANYAPCVENPAAKGCPGEIKQPTAMSSYRGAEHQT
Ga0126377_114503412	3300010362	Tropical Forest Soil	MFSKTTIALAAVSLAIIVGSFTPATANYAPCVENPAAMGCPGEMNQPQSNTRGAEHPTVPATRHHHG*
Ga0126379_121582472	3300010366	Tropical Forest Soil	MFSKTAIALAVTLFAVGAAALTPAMANYAPCYENPAAKGCPGEISQPGERGSQGAEHPTVPATRHHHG*
Ga0134125_112230492	3300010371	Terrestrial Soil	MFSKTAIALAAASFAVGVAALSPAMANYAPCVENPAAKGCPFESKQNTAMPSYRGAEHQTRHT
Ga0105239_113828241	3300010375	Corn Rhizosphere	MLSKTAIALVAASFALDLVALTPAMANYAPCVENPAAKGCPGEINQNTNANSYRGAEHHTPHMTRHHG*
Ga0134126_112702012	3300010396	Terrestrial Soil	MFSKTAIALAAASFAVGAAALTPAMANYAPYVENLASKGCPGEIKQNRATPSYRGVEHHTRSTTHHHG*
Ga0126383_101195374	3300010398	Tropical Forest Soil	MFSKTAIALVAASLAIGAAAITPAMANYAPCYENPAGPGCPGEIKQSTTSHYYRGAEHPTVPATRHHHG*
Ga0126383_130711491	3300010398	Tropical Forest Soil	MFSKTAIALAVASFAVGAVALTPAMANYAPCLENLAGPGCPGKIKNMTSHQHRGAAHPTVPATRHHHG*
Ga0157340_10229061	3300012473	Arabidopsis Rhizosphere	MLSKTAIALAAASLAVGASAFTTAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG*
Ga0157342_10524532	3300012507	Arabidopsis Rhizosphere	MLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRH
Ga0126375_114251052	3300012948	Tropical Forest Soil	PPSSNGIDDKGGPIMLSKTVIALPAASLAVGASAFTPAMANYAPCVENPAAKGCPGEINQNTNANSYRGAEHQTRHAHHRG*
Ga0126375_118953911	3300012948	Tropical Forest Soil	QRRLVMFSKTAIGLAAASFMVAAAAFTPVMANYAPCYENPAGKGCPGEINQNTSAQSHRGAEHQMPRTHHHG*
Ga0164300_100052593	3300012951	Soil	MFSKTAIALAAASLTLGLAFITPAKANYAPCYENPAAAGCPGEVNPKTSAHNYQGAEHQTRHTIRHHG*
Ga0164300_100083084	3300012951	Soil	MLSKTAIALVAASFALDVVALTPAMANYAPCVENPAAKGCPGEINQNTNANSYRGAEHHTPHMTRHHG*
Ga0164300_100807851	3300012951	Soil	KTAIALIAASLALGFAAPAMANYAPCVENPAATGCPGEINQNTNANSYKGAEHPTVPATRHHHG*
Ga0164298_100065117	3300012955	Soil	MLSKTAIALVAASFALDFVALTPAMANYAPCVENPAAKGCPGEINQNTNANSYRGAEHHTPHMTRHHG*
Ga0164303_114756771	3300012957	Soil	RMVVVLVRRIVMFSKTAIALIAASLALGFAAPAMANYAPCVENPAAKGCPGEINQNTNANSYKGAEHPTVPATRHHHG*
Ga0164299_109795721	3300012958	Soil	MFSKTAIALVAASFALGFAALSPAMANYAPCVENPAAKGCPGEIKQNAATPSYRGAEHHMRSTTSHHG*
Ga0164302_100482802	3300012961	Soil	MFSKTAIALVAASFALGFAALSPAMANYAPCVENPATKGCPGEIKQNAATPSYRGAEHHMRSTTSHHG*
Ga0164302_111130451	3300012961	Soil	PSTRMVVVLVRRIVMLSKTAIALIAAFFALGFAAITPAMANYAPCYENPASSGCPGAINQNTHSNRGAEHQTSTTHHHG*
Ga0126369_100275796	3300012971	Tropical Forest Soil	MFSKTAIALVAASLAIGAAAITPAMANYAPCYENPAGPGCPGEIKQSTTSHYYRGAEHPTVPATWHHHG*
Ga0126369_136784601	3300012971	Tropical Forest Soil	MFSKTAIALVAVSLAIGASALTPAMANYAPCYENPAGPGCPGEIKQNMTSHYYRGAEHPTVSATRHHHG*
Ga0164309_105416851	3300012984	Soil	IALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG*
Ga0164309_107391091	3300012984	Soil	MLSKTAIALIAPSLVLGFVALTPAMANYAPCYENPAAAGCPGATNQNTHSNRGAEHQAPWTRHHG*
Ga0164309_109432121	3300012984	Soil	MFSKTAIALAAASFAVGAAALTPAMANYAPCVENPASKGCPGEIKQNTATPSYRGAEHHTRSTPHHHG*
Ga0164308_100931053	3300012985	Soil	VMFSKTAIALAAASLTLGLAFITPAKANYAPCYENPAAAGCPGEVNPKTSAHNYQGAEHQTRHTIRHHG*
Ga0164308_104731611	3300012985	Soil	IVMFSKTAIALIAASLALGFAAPAMANYAPCVENPAAKGCPGEINQNTNANSYKGAEHPTVPATRHHHG*
Ga0164308_105301122	3300012985	Soil	MPSKTAIALIAASFALGFAALTPAMANYAPCYENPAAAGCPGATNQNTHSNRGAEHQAPWTRHHG*
Ga0164308_107063272	3300012985	Soil	MFSKTAIALAAASFAVGAAALTPAMANYAPCVENPAGKGCPGEIKQNTATPSYRGAEHHTRSTTHHHG*
Ga0164304_100947472	3300012986	Soil	MLSKTAIALAAASLAVGASVFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG*
Ga0164304_101369562	3300012986	Soil	MFSKTAIALIAASLALGFAAAALANYAPCVENPAAKGCPGEINQNTNANSYKGAEHPTVPATRHHHG*
Ga0164307_100164631	3300012987	Soil	RRIIMLSKTAIALVAASFALDFVALTPAMANYAPCVENPAAKGCPGEINQNTNANSYRGAEHHTPHMTRHHG*
Ga0164306_118565291	3300012988	Soil	MFSKTAIALAAASFAVGAAALTPAMANYAPCVENPASKGCPGEIKQNRATPSYRGAEHHMRGTTSHHG*
Ga0164306_118804521	3300012988	Soil	MLSKTAIALIAPSLVLGFVALTPAMANYAPCYENPAAAGCPGATNQNTHSNRGAEHQAPWTRHHG
Ga0164305_105015842	3300012989	Soil	MFSKTAIALAAASFAVGAAALTPAMANYAPCVENPASKGCPGEIKQNRATPSYRGAEHHTRSTTHHHG*
Ga0163162_121871452	3300013306	Switchgrass Rhizosphere	MFSKTAIALAAVSFAVGAAALTPAMANYAPCVENPAGKGCPGEIKQNAATPSYRGAEHHTRSTTRHHG*
Ga0157372_103951672	3300013307	Corn Rhizosphere	MLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHGSS*
Ga0157375_106702022	3300013308	Miscanthus Rhizosphere	MLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNQNSYKGAEHQTRHTTRHPG*
Ga0157376_114985281	3300014969	Miscanthus Rhizosphere	DGGPVMLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG*
Ga0132258_106132543	3300015371	Arabidopsis Rhizosphere	MFSKTAIALAAASLLLGAAAVTPAMANYAPCYENPAASGCPGDINPKTTANSHRAEHPTSHTTRHHG*
Ga0132258_113212122	3300015371	Arabidopsis Rhizosphere	MFSKTAFALGAASLALAATTVTPAMANYAPCYENPAASGCPGDINPKTTANSHRAEHPTPHSTRHHG*
Ga0132258_118720452	3300015371	Arabidopsis Rhizosphere	MFSKTAIALAAASLALGLAFLTPANANYAPCYENPAAAGCPGEVNPKASTHNYQGAEHQTRHTTRHHG*
Ga0132256_1020035501	3300015372	Arabidopsis Rhizosphere	FLTRRIVMFSKTAIALAAASLLLGAAAVTPAMANYAPCYENPAASGCPGDINPKTTANSHRAEHPTSHTTRHHG*
Ga0132256_1023807431	3300015372	Arabidopsis Rhizosphere	MFSKTEIGLAAASFLAAAAAFTPAMANYAPCYENPAAKGCPGEINQNTATSTYRGAEHQMPRTHHHG*
Ga0132257_1012336361	3300015373	Arabidopsis Rhizosphere	MLSKTAIALVAASFALEFVALTPAMANYAPCVENPAAKGCPGEINQNTNANSYRGAEHHTPHMTRHHG*
Ga0132255_1011263561	3300015374	Arabidopsis Rhizosphere	PQRRLVMFSKTEIGLAAASFLAAAAAFTPAMANYAPCYENPAAKGCPGEINQNTATSTYRGAEHQMPRTHHHG*
Ga0187786_102235482	3300017944	Tropical Peatland	MFSKTAIALAVTLFAVGAAALTPAMANYAPCYENPAAKGCPGEISQSGARGSQGAEHPTVPATRHHHG
Ga0184608_104075841	3300018028	Groundwater Sediment	MFSKTAIALAAASLTLGLAFITPAKANYAPCYENPAAAGCPGQVNQNTAAHSYKGAEHPTRHATHHHG
Ga0184625_105041551	3300018081	Groundwater Sediment	MFSKTAIALAAASLALGATAVTSATANYTPCYENPAATGCPGNYQVNQNTGAHSYKGAEHPTRHTIRHHG
Ga0210402_108824361	3300021478	Soil	MVVVLVRRIVMLSKTAIALIAASLALGFAALTPAMANYAPCYENPAAAGCPGATNQNTHSNRGAEHQAPWTRHHG
Ga0222729_10176982	3300022507	Soil	MFSKTAIALIAASLALGFAAPAMANYAPCVENPAAKGCPGEINQNTNANSYKGAEHPTVPATRHHHG
Ga0207688_104069011	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG
Ga0207663_102885323	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLSKTAIALAAASLAVGVSAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG
Ga0207669_100920981	3300025937	Miscanthus Rhizosphere	MFSKTAIALAAASFAVGVAALSPAMANYAPCVENPAAKGCPGEIKQNAATPSYRGAEHHMRSTT
Ga0207704_102841492	3300025938	Miscanthus Rhizosphere	MLRKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG
Ga0207712_117821521	3300025961	Switchgrass Rhizosphere	MFSKTAIALAAASFAVGAAALTPAMANYAPCVENPAGKGCPGEIKQNTATPSYRAEHHTRSTTHHHG
Ga0207668_115545782	3300025972	Switchgrass Rhizosphere	MLCKTAIALVAASFALDLVALTPAMANYAPCVENPAAKGCPGEINQNTNANSHRGAEHHTPHMTRHHG
Ga0207658_121771391	3300025986	Switchgrass Rhizosphere	MFSKTAIALAAASFAVGVAALSPAMANYAPCVENPAAKGCPGEIKQNAATPSYRGAEHHMRSTTSHHG
Ga0207708_108590431	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGA
Ga0207708_110596881	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MFSKTAIALAAASFAVGVAALSPAMANYAPCVENPAAKGCPGEIKQNAATPSYRAEHHTRSTTHHHG
Ga0207675_1002515544	3300026118	Switchgrass Rhizosphere	MFSKTAIALAAASFAVSATALTPAMANYAPCVENPAAKGCPGEIKQNTATPSYRAEHHTRSTTHHHG
Ga0208890_10328992	3300027523	Soil	MLSQTAIALLAASFALGAAAPTPVMANYAPCVENPSAKGCPGYINTTTQNSYRGAEHQTR
Ga0209974_104532041	3300027876	Arabidopsis Thaliana Rhizosphere	MLSKTAIALVTASFALGAAALTPAMANYASCVENPAAKGCPGEIKQNTAMPSYRGAEHQTRHTTRHHG
Ga0207428_109628862	3300027907	Populus Rhizosphere	MFSKTAIALAAASFVVGAAALTPAMANYAPCLENPAAKGCPGEIKQNAARPSYRGAEHQTRHTIRHHG
Ga0247828_108105852	3300028587	Soil	MFSKTAIALAAASFAVGAAALTPAMANYAPCVENPAGKGCPGEIKQNAATPSYRGAEHHPRSTTHHHG
Ga0247818_104074541	3300028589	Soil	MFSKTAIALAAVSFAVGAAALTPAMANYAPCVENPAGKGCPGEIKQNAATPSYRGAEHHTRSTTRHHG
Ga0247822_103294831	3300028592	Soil	MFSKTAIALAAASFAVSATALTPAMANYAPCVENPAAKGCPGEIKQNTATPRYRGAEHQTRHMTRHHG
Ga0247824_104067002	3300028809	Soil	MFSKTAIALAAASLALGATAVTSATANYAPCYENPAATGCPGNYQVNQNTGAHSYKGAEHPTRHTIRHHG
Ga0307498_100359241	3300031170	Soil	MLSKTAIALVAASFALDFVALTPAMANYAPCVENPAAKGCPGEINQNTNANSYRGAEHHTPHMTRHHG
Ga0307498_100730232	3300031170	Soil	MFSKIALAVASLALGAAAGTPAMANYAPCYENPAATGCPGDINPKSTANSHRAEHPMPHTTRHHG
Ga0170819_156728011	3300031469	Forest Soil	MLSKTAIALAAVSLAVGAAALTPALANYAPCVENPAAKGCPGEINQNTNANSYKGAEHQTRHTTRHHG
Ga0310887_104077642	3300031547	Soil	MFSKTAIALAAASLTLGLAFITPAKANYAPCYENPAAAGCPGEVNPKTSAHNYQGAEHQTRHTIRHHG
Ga0307469_108164991	3300031720	Hardwood Forest Soil	MSSKTAIALAAASLALGATAVTPATANYAPCYENPAATGCPGNYQVNPKTSSHSYQGAEHQTRPTVRHHG
Ga0307469_122549341	3300031720	Hardwood Forest Soil	TAIALVAASFALGFAALSPAMANYAPCVENPAAKGCPGEIKQNAATPSYRGAEHHMRGTTSHHG
Ga0307473_115155272	3300031820	Hardwood Forest Soil	MFSKTAIALVAASFALGFAALSPAMANYAPCVENPAAKGCPGEIKQNAATPSYRGAEHHMRGTTSHHG
Ga0310904_101529802	3300031854	Soil	AIALAAASLTLGLAFITPAKANYAPCYENPAAAGCPGEVNPKTSAHNYQGAEHQTRHTIRHHG
Ga0310904_105700903	3300031854	Soil	MLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAE
Ga0310900_101577172	3300031908	Soil	MLSKTAIALAAASLAVGASVFTPAMANYAPCVENPAAKGCPGEISQNTNANSYKGAEHQTRHTTRHHG
Ga0310890_115356872	3300032075	Soil	NDGGPVMLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTTANSYKGAEHQTRHTTRHHG
Ga0307470_102869211	3300032174	Hardwood Forest Soil	MFRKTAIALAAASFAVSATALTPAMANYAPCVENPAAKGCPGEIKQNTATPSYRGAEHQTRHMTRHHG
Ga0310889_105409401	3300032179	Soil	MFSKTAIALAAASLTLGLAFITPAKANYAPCYENPAAAGCLGEVNPKTSAHNYQGAEHQTRHTIRHHG
Ga0307471_1006174443	3300032180	Hardwood Forest Soil	SKTAIALAAASLALGATAVTSATANYAPCYENPAATGCPGNYQVNQNTGAHSYKGAEHPTRHTIRHHG
Ga0307471_1027605412	3300032180	Hardwood Forest Soil	MFSKTAIALAAVSFAVGAAALTPAMANYAPCVENPAGKGCPGEIKQNAATPSYRGAEHHTRSTT
Ga0307471_1034582621	3300032180	Hardwood Forest Soil	MFSKTAIALAAASLALGATAVTPATANYAPCYENPAATGCPGNYEVNQNTGAHSYKG
Ga0307472_1003178322	3300032205	Hardwood Forest Soil	MFSKTAIALAAASFAVSATALTPAMANYAPCVENPAAKGCPGEIKQNTATPSYRGAEHQTRHMTRHHG
Ga0306920_1021624582	3300032261	Soil	MFSKTAIALVAASLAIGAAAITPAMANYAPCYENPAGLGCPGEIKQSTTSHYYRGAEHPTVPATRHHHG
Ga0247830_105571161	3300033551	Soil	MLSKTAIALAAASLAVGASAFTPAMANYAPCVENPAAKGCPGEISQNTTANSYKGAEHQTRHTTRHHG
Ga0247830_114143331	3300033551	Soil	MLTKTAIALAAASIAVGAGALTPAMANYAPCVENPEAKGCPGEIKNMATHSYKGAEHQTRHTTRHHG
Ga0373896_040753_267_473	3300034192	Sediment Slurry	MLSKTAIALVAASFALGVAALTPAMANYAPCVENPAAKGCPGEISRNTNANSYRGAEHHTPHMTRHHG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055503

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences