Metagenome / Metatranscriptome Family F055293

Overview

Basic Information

• Family ID: F055293
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 139
• Average Sequence Length: 61 residues
• Representative Sequence: AINGMAAEIQPHQHVIGVLRAGLPVPGGPEAVDAAKRALYKGANGGGRNPAAAVL
• Number of Associated Samples: 132
• Number of Associated Scaffolds: 139

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 30.94 %
• % of genes near scaffold ends (potentially truncated): 43.88 %
• % of genes from short scaffolds (< 2000 bps): 78.42 %
• Associated GOLD sequencing projects: 124
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (89.209 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.669 % of family members)
• Environment Ontology (ENVO): Unclassified (21.583 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (58.993 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 14.46%
  β-sheet: 0.00%
  Coil/Unstructured: 85.54%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF01649	Ribosomal_S20p	60.43
PF01625	PMSR	10.79
PF11638	DnaA_N	3.60
PF01738	DLH	2.88
PF02563	Poly_export	0.72
PF00712	DNA_pol3_beta	0.72
PF00111	Fer2	0.72
PF00312	Ribosomal_S15	0.72
PF11774	Lsr2	0.72
PF01799	Fer2_2	0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0268	Ribosomal protein S20	Translation, ribosomal structure and biogenesis [J]	60.43
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	10.79
COG0184	Ribosomal protein S15P/S13E	Translation, ribosomal structure and biogenesis [J]	0.72
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.72
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.72

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.21 %
Unclassified	root	N/A	10.79 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.21 %
Unclassified	root	N/A	10.79 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.21 %
Unclassified	root	N/A	10.79 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.21 %
Unclassified	root	N/A	10.79 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	89.21 %
Unclassified	root	N/A	10.79 %

Level 6

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	89.21 %
Unclassified	root	N/A	10.79 %

Level 7

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	89.21 %
Unclassified	root	N/A	10.79 %

Level 8

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	84.89 %
Unclassified	root	N/A	10.79 %

Level 9

Name	Rank	Taxonomy	Distribution
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.72 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.44 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	43.17 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2.16 %
Unclassified	root	N/A	10.79 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.16 %

Level 10

Name	Rank	Taxonomy	Distribution
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.72 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.44 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	43.17 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2.16 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.44 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.72 %
Unclassified	root	N/A	10.79 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2124908035|B3_GZOS_CLC_ConsensusfromContig74058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	618
2166559005|cont_contig10103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1584
3300001396|JGI20175J14863_1029911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	654
3300001471|JGI12712J15308_10069554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	891
3300001593|JGI12635J15846_10379626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	858
3300001661|JGI12053J15887_10013787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4465
3300002886|JGI25612J43240_1036614	Not Available	707
3300002907|JGI25613J43889_10082858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	856
3300002911|JGI25390J43892_10070595	Not Available	805
3300002917|JGI25616J43925_10131870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1010

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.72%
Environmental	Environmental	92.09%
Host-Associated	Host-Associated	7.19%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	7.19%
Modeled	Engineered → Modeled	0.72%
Plants	Host-Associated → Plants	7.19%
Terrestrial	Environmental → Terrestrial	84.89%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	5.04%
Peat	Environmental → Terrestrial → Peat	2.88%
Peat Moss	Host-Associated → Plants → Peat Moss	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.32%
Roots	Host-Associated → Plants → Roots	0.72%
Sediment	Environmental → Aquatic → Sediment	2.16%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.72%
Soil	Environmental → Terrestrial → Soil	82.01%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.44%
Ice	Environmental → Aquatic → Freshwater → Ice	0.72%
Loam	Environmental → Terrestrial → Soil → Loam	17.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.72%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.32%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.91%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	0.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.72%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.72%

Habitat

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	7.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.16%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.72%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.79%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.44%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.44%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.44%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.16%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.44%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.44%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.67%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2124908035	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental
2166559005	Simulated microbial communities from Lyon, France	Engineered
3300001396	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012	Environmental
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_GZOS_CLC_01270940	2124908035	Soil	VREIQPHQHLISVFRPGFPAPGSPEGVDAAKRALYKDANGGGRNPAAAVL
cont_0103.00001230	2166559005	Simulated	MRHLILSHPKAQPAINGTAAEIQPHQHVIGVLRAGPGGSGGPEAVDAAKRALYKGANGGGRNPAAAVL
JGI20175J14863_10299111	3300001396	Arctic Peat Soil	PGPQSAINGAVWEIQPHQHLIGVFRPGFPAPGSPEGVDAAKRALYKTLNGGGRNPAAAVL
JGI12712J15308_100695542	3300001471	Forest Soil	MRHLYLCAGKALSALNGPPREIQPHQHLIGFSAAGLLVPGSPEGVDAAKRALYKTGNGGGRNPAAAVL*
JGI12635J15846_103796261	3300001593	Forest Soil	RKKPRIIGHLLSIAPKTSSALNGAAREIQPLQQLIGPLAAGVSAPKWPEGVDAARRALYKTVNGGGRNPAAAVL*
JGI12053J15887_100137875	3300001661	Forest Soil	MQSAISGTAGEIQPHQHLISVAEAGLPVPGGVETVDAARPALYKGANGGGRNPAAAVL*
JGI25612J43240_10366143	3300002886	Grasslands Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLPVPGGPEAVDAAKRALYKGANGG
JGI25613J43889_100828583	3300002907	Grasslands Soil	MAAEIQPHQHVIGVLRAGLPVPGGPEAVDAAKRALYKGANGGGRNPAAA
JGI25390J43892_100705952	3300002911	Grasslands Soil	MAAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAA
JGI25616J43925_101318701	3300002917	Grasslands Soil	AINGMAAEIQPHQHVIGVLRAGLPVPGGPEAVDAAKRALYKGANGGGRNPAAAVL*
JGI25616J43925_103337432	3300002917	Grasslands Soil	MRHLIXSHPKAQPAINGMAAEIQPHQHXIGXLXAXLPVRGGPEAVDAAKRALYKGGNGGG
Ga0066674_102711893	3300005166	Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0066680_101999682	3300005174	Soil	MRHLILSHPKAQLAINGMAAEIQPHQHVIGVLRAGLPVRGGPEEVDAAKPALYKGANGGGRNPAAAVL*
Ga0066684_100727602	3300005179	Soil	MAAEIQPHQHVIGVLRAGLPVRGGPEEVDAAKPALYKGANGGGRNPAAAVL*
Ga0066676_108439722	3300005186	Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLQVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0066675_100697351	3300005187	Soil	RKKPRIMRHLILSHPKAQLAINGMAAEIQPHQHVIGVLRAGLPVRGGPEEVDAAKPALYKGANGGGRNPAAAVL*
Ga0070670_1015153052	3300005331	Switchgrass Rhizosphere	QPLQQLIRIFGTGRPAPGRREVVDAAGRALYKTGNGGGRNPAAAVL*
Ga0070668_1007213361	3300005347	Switchgrass Rhizosphere	MRHLMSVAPRTQSGINGAVQEIQPLQQLIRPFETGRAAPGALESVDAAGRALYKTGNGGGRNPAAAVL*
Ga0070711_1010710302	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAAEIQPHQHVIGALRAGLPVRGGPEAVDAAKRALYKGANGGGRNPAAAVL*
Ga0070706_1005993891	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRHLILSHPKAQPAINGMAAEIQPHQHLIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0070698_1005133773	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRHLILSHPKAQPAINGMAAEIQPHQHLIGVLRAGLPVGGGPEAVDAAKRALYKGANGGGRNPAAAVL
Ga0070704_1021565341	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	IQPHQHLIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0066701_108619871	3300005552	Soil	RKKPRIMRHLILSHPKAQLAINGMAAEIQPHQHVIGVLRAGLPVRGGPEEVDAAKSALYKGANGGGRNPAAAVL*
Ga0066661_100769693	3300005554	Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLPVRGGPEEVDAAKPALYKGANGGGRNPAAAVL*
Ga0068855_1007871172	3300005563	Corn Rhizosphere	MPSAITGTSEEIQPRQHLIDALGPPSPVPAGPESVDASGRALYKTGNGGGRNPAAAVL*
Ga0070764_109150851	3300005712	Soil	MPPANTGTSEEIQPHQHLIDALEPQPLVPAGPESVDGPQRALYKTGNGGGRNPAAAVL*
Ga0070766_111575471	3300005921	Soil	EIQPHQHLIGFSAAGLLVPGSPEGVDAAKRALYKTANGGGRNPAAAVL*
Ga0066787_101712762	3300005950	Soil	MSVSPKTQSGISGAAEEIQPHQHLIGVFRPTVPAPEGPEGVDGAKPALYKSANGGGRNPAAAVLWV
Ga0097691_100013259	3300006055	Arctic Peat Soil	MRHLISVAPGPQSAINGAVWEIQPHQHLIGVFRPGFPAPGSPEGVDAAKRALYKTLNGGGRNPAAAVL*
Ga0075527_100431492	3300006640	Arctic Peat Soil	LFLSRPGPQSAINGAVREIQPDQHLIGVFRPGFPAPGSPEGVDAAKRALYKTLNGGGRNPAAAVL*
Ga0066797_11221252	3300006864	Soil	MRHLISVAPGPQSAINGAVREIQPHQHLIGVFRPGFPAPGSPEGVDAAKRALYKTLNGGGRNPAAAVL*
Ga0075524_101250822	3300006950	Arctic Peat Soil	MRHLISVAPGPQSAINGAVREIQPDQHLIGVFRPGFPAPGSPEGVDAAKRALYKTLNGGGRNPAAAVL*
Ga0099794_100198601	3300007265	Vadose Zone Soil	MRHLLLSHPKALPAINGMAAEIQPHQHLIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNLAAAVL*
Ga0066710_1006787982	3300009012	Grasslands Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLPVRGGPEEVDAAKPALYKGANGGGRNPAAAVL
Ga0099827_101960332	3300009090	Vadose Zone Soil	MRHLILSHPTAQPAINGMAAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0099792_100887803	3300009143	Vadose Zone Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLPVPGGPEAVDAAKRALYKGANGGGRNPAAAVL*
Ga0116854_10453143	3300009400	Soil	MPSAITGTLLEIQPHQRFIGARRSGRPVPQGPEGVDAGGRALYKTANGGGRNPAAAVLCATPSYGACS
Ga0116221_11423433	3300009523	Peatlands Soil	VQSAINGVAQEIQPHQRLIGLFAASVPARRRPEDVDAAKRALYKTGNGGGRNPAAAVL*
Ga0105249_114761543	3300009553	Switchgrass Rhizosphere	MRHLILSHPKAQPAINGMAAEIQPHQHLIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRN
Ga0116105_10806572	3300009624	Peatland	EIQPHQHLIGFFATSLPAPKRPEGVDAAKRALYNTANGGGRNPAAAVL*
Ga0105854_11603321	3300009660	Permafrost Soil	AINAAKREIQPHQQLIGVFRPGFPVQGSPEGVDAAKRAPYKTGNGGGCNPAAAVL*
Ga0116227_105518842	3300009709	Host-Associated	MPSAISGAIREIQPHQHLIGAFRPDFAALRGAEGVDAANRALYKTGIGGGRNPAAAVL*
Ga0126382_113993702	3300010047	Tropical Forest Soil	EIQPHQHLTRHFRTVPGLPGKVESVDGAGTALYKTPNGGGRNPAAAVL*
Ga0099796_101052652	3300010159	Vadose Zone Soil	MRHLVSIAPETQSAINGAAREIQPHQHLISMFRRAFLPRASPEGVDAAKRPLYKGANGGGRNPAAAVL*
Ga0134080_100486822	3300010333	Grasslands Soil	MRHLILSRPKAQPAINGVAAEIQPHQHLIGVLHASPPVRCGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0134062_101132112	3300010337	Grasslands Soil	MHHLILSHPKAQLAINGMAAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0134066_100771252	3300010364	Grasslands Soil	LSHPKAQLAINGMAAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0134126_113071232	3300010396	Terrestrial Soil	MPSAITGTSEEIQPHQHLIDALGPPSPVPEGAESVDASGRALYKTGNGGGRNPAAAVL*
Ga0126355_10050501	3300010855	Boreal Forest Soil	IQPHQHLIGLFAVGFPAPKEPLGVDAAWPALYKTGNGGGRNPAAAVL*
Ga0137463_10502683	3300011444	Soil	QPHQHLIGAFQQAARAPEGPEGVDAAKRALYKTPIGGGRNPAAAVL*
Ga0137364_100344373	3300012198	Vadose Zone Soil	MRHLILSHPKAQPAINGTAAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0137381_101564803	3300012207	Vadose Zone Soil	VLRPKTPSAINGAAREIQPHQHLIGAFQQAPRAPEGPEGVDAARRALYKTPNGGGRNPAAAVL*
Ga0137370_100579114	3300012285	Vadose Zone Soil	PPASSNSPTSRKKPRIMRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLQVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0137361_117297202	3300012362	Vadose Zone Soil	MRHLILSHPKAQPAINGTAAEIQPHQHVIGVLRAGRGGPEAVDAAKRALYKGANGGGRNPAAAVL*
Ga0157283_100440782	3300012907	Soil	LSHPKAQPANNGMAAEIQPHQHVIGVLGAGLPVRGGPEAVDAAKRALYKGANGGGRNPAAAVL*
Ga0137394_114306712	3300012922	Vadose Zone Soil	MAAEIQPHQHLIGVLRADLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0137359_102321131	3300012923	Vadose Zone Soil	KMNPPASSNSPTSRKKPRIMRHLILSHPKAQPAINGMPAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0137416_101751753	3300012927	Vadose Zone Soil	LETPSAITGAMEEIQPHQCLMDALRPGWPVPAAAESVDAAKTSLYKGANGGGRNPAAAVL
Ga0137416_107556461	3300012927	Vadose Zone Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKRAHYKGANGGGRNPAAAVL*
Ga0137404_103209392	3300012929	Vadose Zone Soil	MRHLILSHPKAQPAINGMAAEIQPHQHLIGVLRAGLPVRGGPEAVDATKPALYKGANGGGRNPAAAVL*
Ga0164303_105362392	3300012957	Soil	AEIQPDQHLISVFWPGSTASDGFEGVDAAKRALYKGANGGGRNPAAAVL*
Ga0164304_100225932	3300012986	Soil	VAAEIQPHQHVIGALRAGLPVRGGPEAVDAAKRALYKGANGGGRNPAAAVL*
Ga0134078_103083421	3300014157	Grasslands Soil	NGMAAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL*
Ga0181523_103459591	3300014165	Bog	AINGVAQEIQPHQRLIGLFAASVPARRRPEDVDAAKRALYKTGNGGGRNPAAAVL*
Ga0181528_100607833	3300014167	Bog	RRKAPSALNGAAWEIQPHQHLIGFFAASLPASKRPEDVDAAKRALYKTANGGGRNPAAAVL*
Ga0181531_105482871	3300014169	Bog	SAHTGAAWEIQPHQHLIGFFAASLPASKGPEDVDAAKRALYKTANGGGRNPAAAVL*
Ga0182018_103848771	3300014489	Palsa	SEKTADHASPYICRARNASAITGANREIQPHQHLIGAFRPGLPALRGPEGVDAANRALYKTGIGGGRNPAAAVL*
Ga0182024_100372417	3300014501	Permafrost	MHHLIYVAPGTPSAITGPPREIQPHQHLIGAFQARLPAAKGPEGVDAAKRALYKTVNGGGRNPAAAVL*
Ga0182024_118116151	3300014501	Permafrost	RRKAQSAHNGAAWEIQPHQQLIGIFAAGLPARRRPEGVDAANRALYKTGNGGGRNPAADVL*
Ga0137405_12019653	3300015053	Vadose Zone Soil	AQEIQPHQHLISAFGPGFPAPGGPEGVDAARRDLYKTGNGGGRNPAAAVL*
Ga0167642_10113653	3300015160	Glacier Forefield Soil	MPSAITGTSEEIQPHQQLIGGLQPGPPVPAGPESVDAHGRALYKTGNGGGRNPAAAVL*
Ga0167644_10532022	3300015206	Glacier Forefield Soil	MPSANTGTSEEIQPHQHLISGLGPDPSVPAGPESVDASGRALYKTRNGGGRNPAAAVL*
Ga0137418_101810645	3300015241	Vadose Zone Soil	EIQPHQHLISLFGPGLPVLGGPESVDAARRALYKTAIGGGRNPAAAVL*
Ga0134072_100377431	3300015357	Grasslands Soil	MHHLILSHPKAQLAINGMAAEIQPHQHVIGVLRAGLPVRGGPEEVDAAKPALYKGANGGGRNPAAAVL*
Ga0184621_101214272	3300018054	Groundwater Sediment	MAAEIQPHQHLIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL
Ga0184631_101226841	3300018070	Groundwater Sediment	VAPGTQSGITGGPQEIQPLQHLIRASAPGPPARSGPESVDAAKRALYKTGNGGGRNPAAAVL
Ga0066667_100052342	3300018433	Grasslands Soil	MRHLILSHPKAQLAINGMAAEIQPHQHVIGVLRAGLPVRGGPEEVDAAKPALYKGANGGGRNPAAAVL
Ga0137408_12077113	3300019789	Vadose Zone Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL
Ga0193702_10082152	3300019871	Soil	HLIGAPGLDFPVPERSEGVDAAKRALYKTGNGGGRNLAAAIL
Ga0193743_10084053	3300019889	Soil	VAGEIQPHQHLIGAPGLDFPVPERSEGVDAAKRALYKTGNGGGRNLAAAIL
Ga0193726_10231213	3300020021	Soil	MQSGINGAAQEIQPHQHLIGFSKPGLPDLRRPENVDAANRALYKTANGGGRNPAAAVLWTTPSREHLLRNRHAGERP
Ga0210407_100305142	3300020579	Soil	VAAEIQPHQHVIGVLRTSLPVRGGLEAVDAAKRALYKGANGGGRNPAAAVL
Ga0210405_104941301	3300021171	Soil	AQSALNEAVREIQPHQHLIGFSAAGLSAPGGPEGVDAAERALYKTGNGGGRNPAAAVL
Ga0210408_103450971	3300021178	Soil	YLSHPKAQPAITGVAAEIQPHQHVIGVLRTSLPVRGGLEAVDAAKRALYKGANGGGRNPAAAVL
Ga0210408_111515691	3300021178	Soil	QSAINGAAREIQPHQHLISLFTAGFAVPKEPLGVDAAWPALYKTGNGGGRNPAAAVL
Ga0210389_110330911	3300021404	Soil	MQSAINGLAWEIQPHQQLIGLFAARVPTARRPEGVDAAKRALYKTGNGGGRNPAAAVL
Ga0210387_103354612	3300021405	Soil	MRHLYLCAGKALSALNGAPREIQPHQHLIGFSAAGLLVPGSPEGVDAAKRALYKTGNGGGRNPAAAVL
Ga0210383_101461242	3300021407	Soil	MPSAITGTSEEIQPHQHLIGALGPALPVPAGPESVDASRRALYKTGNGGGRNPAAAVL
Ga0210392_100827043	3300021475	Soil	MRHLYLCAGKAQSALNGLPREIQPHQHLIGFSAAGLLVPGSPEGVDAAKRALYKTGNGGGRNPAAAVL
Ga0210410_102255093	3300021479	Soil	VAAEIQPHQHVIGVLRASLPVRGGLEAVDAAKRALYKGANGGGRNPAAAVL
Ga0209724_11467001	3300025140	Glacier Valley	PKTQPALSRLVQEIQLLQHLISLLSPGPPALRGPESVDAAGRALYKTAIGGGRNPAAAVL
Ga0208035_10104351	3300025406	Peatland	PSALNGAAWEIQPHQHLIGFFATSLPAPKRPEGVDAAKRALYKTANGGGRNPAAAVL
Ga0208935_10448422	3300025414	Peatland	WEIQPHQHLIGFFATSLPAPKRPEGVDAAKRALYNTANGGGRNPAAAVL
Ga0208850_10075163	3300025457	Arctic Peat Soil	MRHLISVAPGPQSAINGAVWEIQPHQHLIGVFRPGFPAPGSPEGVDAAKRALYKTLNGGGRNPAAAVL
Ga0208220_10251012	3300025627	Arctic Peat Soil	MPSANTGTSEEIQPHQHLIDTVGPAPPVPAGPESVDGSGRALYKTGNGGGRNPAAAVL
Ga0208589_10067483	3300025634	Arctic Peat Soil	MPTANTGTSEEIQPHQHLIDALGPMPPVPAGPESVDACGRALYKTGNGGGRNPAAAVL
Ga0208357_10599882	3300025703	Arctic Peat Soil	MPTANTGTSEEIQPHQHLIDTVGPVPPVPAGPESVDGSGRALYKTGNGGGRNPAAAVL
Ga0209638_10144803	3300025725	Arctic Peat Soil	MRHLISVAPGPQSAINGAVREIQPDQHLIGVFRPGFPAPGSPEGVDAAKRALYKTLNGGGRNPAAAVL
Ga0209483_10328793	3300025862	Arctic Peat Soil	MPSANTGTSEEIQPHQHLIDTVGPVPPVPAGPESVDGSGRALYKTGNGGGRNPAAAVL
Ga0207646_100271325	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRHLILSHPKAQPAINGMAAEIQPHQHLIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL
Ga0207667_108771652	3300025949	Corn Rhizosphere	MPSAITGTSEEIQPRQHLIDALGPPSPVPAGPESVDASGRALYKTGNGGGRNPAAAVL
Ga0209438_10244034	3300026285	Grasslands Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLPVPGGPEAVDAAKRALYKGANGGGRNPAAAVL
Ga0209438_11630961	3300026285	Grasslands Soil	MAAEIQPHQHLIGVLRADLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL
Ga0209234_10954632	3300026295	Grasslands Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLQVRGGPEAVDAAKPALYKGANGGGRNPAAAVL
Ga0209240_10015247	3300026304	Grasslands Soil	MAAEIQPHQHVIGVLRAGLPVPGGPEAVDAAKRALYKGANGGGRNPAAAVL
Ga0209688_11121531	3300026305	Soil	QLAINGMAAEIQPHQHVIGVLRAGLPVRGGPEEVDAAKPALYKGANGGGRNPAAAVL
Ga0257162_10080452	3300026340	Soil	MRHLILSHPKAQPAINGMAAEIQPHQHVIGVLRAGLPVRGGPEAVDAAKRALYKGANGGGRNPAAAVL
Ga0257173_10107692	3300026360	Soil	MSHPKAQPAINGMAAEIQPHQHVIGVLRAGLPVPGGPEAVDAAKRALYKGANGGGRNPAAAVL
Ga0209732_10508161	3300027117	Forest Soil	PTRRKKPRIMRHLYLCAGKAQSALNGLPREIQPHQHLIGFSAAGLLVPRSPEGVDAAKRALYKTGNGGGRNPAAAVL
Ga0208997_10013171	3300027181	Forest Soil	EIQPHQHLISLFGPGLPVLRGPESVDAARRALYKTAIGGGRNPAAAVL
Ga0208987_10095034	3300027496	Forest Soil	MRHPIFVRPETQSAITGAAREIQPHQHLTGTLPPGFRAPGRTEGVDAAKPALYKTRNGGGRNPAAAVL
Ga0208984_11067502	3300027546	Forest Soil	MQSAISGTAGEIQPHQHLIRVAEAGLPVPGGVETVDAAIPALYKGANGGGRNPAAAVL
Ga0208982_10078682	3300027574	Forest Soil	MQSGINGAAEEIQPHQHLIGLFRSDLPGLRRPENVDAANRALYKTGNGGGRNPAAAVLWTTP
Ga0208982_10355113	3300027574	Forest Soil	MPSAITGTSEEIQPHQHLIRALGPDPLVPEGPESVDASGRALYKTRNGGGRNPAAAVL
Ga0208982_10437182	3300027574	Forest Soil	ASETSSAINGPEQEIQPHQHLNSFFEVDFRLPDRPEGVDAAKPALYKTGNGGGRNPAAAV
Ga0209330_10315091	3300027619	Forest Soil	ALNGAAREIQPLQQLIGPLAAGVSAPKWPEGVDAARRALYKTANGGGRNPAAAVL
Ga0209588_11076291	3300027671	Vadose Zone Soil	SPTSRKKPRIMRHLLLSHPKALPAINGMAAEIQPHQHLIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPAAAVL
Ga0209333_10372962	3300027676	Forest Soil	MRHLTYKAPESAVSPYGAAWEIQPHQHLIGVFAAGLPVQRRPESVDAAKRALYKTGNGGGRNPAAAVL
Ga0209011_10768082	3300027678	Forest Soil	MLHLTSVYLSRPKAQSAITGVAAEIQPHQHLISVFRPCSRARGGPEGVDAAKPALYKGANGGGRNPAAAVL
Ga0209701_101421931	3300027862	Vadose Zone Soil	PCLSRPKTPSAINGAAREIQPHQHLISAFHLPPRAREGPEGVDAAKRALYKTPNGGGRNPAAAVL
Ga0209169_104901632	3300027879	Soil	MPPANTGTSEEIQPHQHLIDALEPQPLVPAGPESVDGPQRALYKTGNGGGRNPAAAVL
Ga0209590_105589731	3300027882	Vadose Zone Soil	AMEEIQPHQCLMDALRPGWPVPAAAESVDAAKTSLYKGANGGGRNPAAAVL
Ga0209624_110545412	3300027895	Forest Soil	LNGAAWEIQPHQHLIGIFAAGLLGPRRPEGVDAANRALYKTGNGGGRNPAADVL
Ga0209006_100518343	3300027908	Forest Soil	MRHLYLCAGKALSALNGPPREIQPHQHLIGFSAAGLLVPGSPEGVDAAKRALYKTGNGGGRNPAAAVL
Ga0302224_104336902	3300028759	Palsa	MPSAISGAIREIQPHQRLIGAFRPGFPALKGPESVDAANRALYKTGIGGGRNPAAAVL
Ga0307302_100409585	3300028814	Soil	MAAEIQPHQHLIGVLRAGLPVRGGPEAVDAAKPALYKGANGGGRNPSAAVL
Ga0307310_100061875	3300028824	Soil	MAAEIQPHQHLIGVLRAGLPVRGGPEAVDAAKPALYKGASGGRNSAAAVL
Ga0308309_109112011	3300028906	Soil	EIQPHQHLIGFSAAGLLVPGSPEGVDAAKRALYKTGNGGGRNPAAAVL
Ga0311331_105755722	3300029954	Bog	MRHLISVRPKTQSAISGATREIQPHQHLIGAFEAGLRPPGGVEGVDAAERALYKTGIGGGRNPAAAVL
Ga0311372_129960892	3300030520	Palsa	MPSGISGAIREIQPHQYLIGSFRQSFPASTGAEAVDAANRALYKTGIGGGRNPAAAVL
Ga0308195_10729512	3300031123	Soil	LSYRKMLPALSGPIGEIQLHQHLISLFGPGFRVSRGPESVDAAGRALYKTAIGGGRNPAAAVL
Ga0307498_101684571	3300031170	Soil	VAAEIQPHQHVIGILRAGLPVRDGPEAVDAAKRALYKGANGGGRNPAAAVL
Ga0308194_102120911	3300031421	Soil	SRPKPPSAISGARQEIQPHQHLIGSPARASGLKQGPEGVDAAKHALYKTPIGGGRNPAAAVL
Ga0307508_100650311	3300031616	Ectomycorrhiza	PQVEKNRGSCVTLYLSSPSRPKPQSAISGAGREIQPHQHLIGSPRPNSGLEEGPEGVDAAQLALYKTPIGGGRNPAAAVL
Ga0265314_100219524	3300031711	Rhizosphere	MPSAITGTSEEIQPHQHLIGTLGPALSVPAGPESVDASWRALYKTGNGGGRNPAAAVL
Ga0307406_115332091	3300031901	Rhizosphere	PQEIQPLQQLIRALQTGRAAPGALESVDAAGHALYKTGNGGGRNPAAAVL
Ga0308175_1011210382	3300031938	Soil	MPPAITGRLQEIQPHQRLIGAPPPHRPVPQGLEAVDAAGGALYKTGNGGGRNPAAAFL
Ga0307416_1012678262	3300032002	Rhizosphere	MRHLISVVAGTPSGITGGVQEIQPLQHLIRALEPGPPASESPEGVDAAGRALYKTGNGGGRNPAAAVL
Ga0326723_0239897_2_178	3300034090	Peat Soil	TPSAINGAAREIQPHQHLIGAFRQAARAPEGPEGVDAARRALYKTPNGGGRNPAAAVL