Metagenome / Metatranscriptome Family F055265

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055265
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	47 residues
Representative Sequence	MKRLIMSVIPLGMLVLAGCVVAPARGYYYHPRAVVVAPAPVVVVRP
Number of Associated Samples	93
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.26 %
% of genes near scaffold ends (potentially truncated)	25.90 %
% of genes from short scaffolds (< 2000 bps)	73.38 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.187 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (15.108 % of family members)
Environment Ontology (ENVO)	Unclassified (34.532 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.518 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.27% β-sheet: 2.70% Coil/Unstructured: 77.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF02913	FAD-oxidase_C	5.04
PF02652	Lactate_perm	4.32
PF00578	AhpC-TSA	3.60
PF01850	PIN	2.88
PF00839	Cys_rich_FGFR	2.16
PF04966	OprB	2.16
PF08327	AHSA1	2.16
PF03176	MMPL	2.16
PF13692	Glyco_trans_1_4	2.16
PF00171	Aldedh	2.16
PF03466	LysR_substrate	2.16
PF08439	Peptidase_M3_N	1.44
PF00593	TonB_dep_Rec	1.44
PF07731	Cu-oxidase_2	1.44
PF00180	Iso_dh	1.44
PF03737	RraA-like	1.44
PF00583	Acetyltransf_1	1.44
PF13470	PIN_3	1.44
PF01925	TauE	1.44
PF14905	OMP_b-brl_3	0.72
PF06762	LMF1	0.72
PF07732	Cu-oxidase_3	0.72
PF03706	LPG_synthase_TM	0.72
PF04828	GFA	0.72
PF01238	PMI_typeI_C	0.72
PF13380	CoA_binding_2	0.72
PF13242	Hydrolase_like	0.72
PF13499	EF-hand_7	0.72
PF01709	Transcrip_reg	0.72
PF00753	Lactamase_B	0.72
PF07883	Cupin_2	0.72
PF12697	Abhydrolase_6	0.72
PF02617	ClpS	0.72
PF04014	MazE_antitoxin	0.72
PF02641	DUF190	0.72
PF02874	ATP-synt_ab_N	0.72
PF04185	Phosphoesterase	0.72
PF00126	HTH_1	0.72
PF04002	RadC	0.72
PF16691	DUF5062	0.72
PF04041	Glyco_hydro_130	0.72
PF01557	FAA_hydrolase	0.72
PF00756	Esterase	0.72
PF01321	Creatinase_N	0.72
PF02567	PhzC-PhzF	0.72
PF07168	Ureide_permease	0.72
PF01738	DLH	0.72
PF10014	2OG-Fe_Oxy_2	0.72
PF00535	Glycos_transf_2	0.72
PF00324	AA_permease	0.72
PF00557	Peptidase_M24	0.72
PF08502	LeuA_dimer	0.72
PF16884	ADH_N_2	0.72
PF07715	Plug	0.72
PF08450	SGL	0.72
PF13344	Hydrolase_6	0.72
PF07995	GSDH	0.72
PF05988	DUF899	0.72
PF05013	FGase	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	5.04
COG1620	L-lactate permease	Energy production and conversion [C]	4.32
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	2.16
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	2.16
COG3659	Carbohydrate-selective porin OprB	Cell wall/membrane/envelope biogenesis [M]	2.16
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	2.16
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	2.16
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	2.16
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	2.16
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	1.44
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	1.44
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.44
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.72
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.72
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	0.72
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.72
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.72
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.72
COG0119	Isopropylmalate/homocitrate/citramalate synthases	Amino acid transport and metabolism [E]	0.72
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.72
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.72
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.72
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	0.72
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.72
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.72
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.72
COG1993	PII-like signaling protein	Signal transduction mechanisms [T]	0.72
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1482	Mannose-6-phosphate isomerase, class I	Carbohydrate transport and metabolism [G]	0.72
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.72
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.72
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.72
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.19 %
Unclassified	root	N/A	33.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.19 %
Unclassified	root	N/A	33.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.19 %
Unclassified	root	N/A	33.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.76 %
Unclassified	root	N/A	33.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.44 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.04 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.81 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	5.04 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.16 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.44 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.72 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.72 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.72 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.81 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.04 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.16 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.44 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.44 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.72 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.72 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.81 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.04 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1.44 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.72 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	0.72 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.72 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.72 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.81 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.04 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	1.44 %
Phenylobacterium hankyongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium hankyongense	0.72 %
Beijerinckiaceae bacterium RH AL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	0.72 %
unclassified Sphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium	0.72 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	0.72 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.81 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.04 %
Variovorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	1.44 %
Sphingobium sp. CAP-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. CAP-1	0.72 %
Phenylobacterium hankyongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium hankyongense	0.72 %
Beijerinckiaceae bacterium RH AL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	0.72 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	0.72 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10000540	All Organisms → cellular organisms → Bacteria	29038	Open in IMG/M
3300000567\|JGI12270J11330_10024424	All Organisms → cellular organisms → Bacteria → Proteobacteria	3659	Open in IMG/M
3300001471\|JGI12712J15308_10188841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	539	Open in IMG/M
3300001593\|JGI12635J15846_10325907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	951	Open in IMG/M
3300004082\|Ga0062384_100834590	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300004092\|Ga0062389_101227106	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300004092\|Ga0062389_101679783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	816	Open in IMG/M
3300004092\|Ga0062389_103129397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	619	Open in IMG/M
3300004152\|Ga0062386_100281676	All Organisms → cellular organisms → Bacteria → Proteobacteria	1322	Open in IMG/M
3300005538\|Ga0070731_10542296	All Organisms → cellular organisms → Bacteria → Proteobacteria	774	Open in IMG/M
3300005541\|Ga0070733_10015346	All Organisms → cellular organisms → Bacteria → Proteobacteria	4803	Open in IMG/M
3300005541\|Ga0070733_10469038	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300005591\|Ga0070761_10054227	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300005591\|Ga0070761_10167356	All Organisms → cellular organisms → Bacteria → Proteobacteria	1292	Open in IMG/M
3300005591\|Ga0070761_10347952	All Organisms → cellular organisms → Bacteria → Proteobacteria	898	Open in IMG/M
3300005610\|Ga0070763_10257045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	948	Open in IMG/M
3300005921\|Ga0070766_11228853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	519	Open in IMG/M
3300009500\|Ga0116229_10026692	All Organisms → cellular organisms → Bacteria → Proteobacteria	6754	Open in IMG/M
3300009500\|Ga0116229_10027328	All Organisms → cellular organisms → Bacteria → Proteobacteria	6637	Open in IMG/M
3300009500\|Ga0116229_11538214	Not Available	525	Open in IMG/M
3300009628\|Ga0116125_1070670	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300009633\|Ga0116129_1006698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4873	Open in IMG/M
3300009643\|Ga0116110_1076517	Not Available	1162	Open in IMG/M
3300009660\|Ga0105854_1394270	Not Available	503	Open in IMG/M
3300009759\|Ga0116101_1029510	Not Available	1115	Open in IMG/M
3300010341\|Ga0074045_10313851	All Organisms → cellular organisms → Bacteria → Proteobacteria	1027	Open in IMG/M
3300010341\|Ga0074045_10618133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. CAP-1	691	Open in IMG/M
3300010343\|Ga0074044_10064469	All Organisms → cellular organisms → Bacteria	2488	Open in IMG/M
3300014158\|Ga0181521_10193973	Not Available	1119	Open in IMG/M
3300014162\|Ga0181538_10079453	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300014168\|Ga0181534_10107864	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300014168\|Ga0181534_10120421	Not Available	1326	Open in IMG/M
3300014168\|Ga0181534_10528357	Not Available	671	Open in IMG/M
3300014168\|Ga0181534_10795306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	559	Open in IMG/M
3300014169\|Ga0181531_10501614	Not Available	750	Open in IMG/M
3300014200\|Ga0181526_10085857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	2007	Open in IMG/M
3300014201\|Ga0181537_10016588	All Organisms → cellular organisms → Bacteria → Proteobacteria	5286	Open in IMG/M
3300014201\|Ga0181537_10128525	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300014201\|Ga0181537_11247854	Not Available	501	Open in IMG/M
3300014489\|Ga0182018_10043176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2793	Open in IMG/M
3300014495\|Ga0182015_10033184	All Organisms → cellular organisms → Bacteria → Proteobacteria	3957	Open in IMG/M
3300014495\|Ga0182015_10154089	Not Available	1560	Open in IMG/M
3300014495\|Ga0182015_10485505	Not Available	790	Open in IMG/M
3300014501\|Ga0182024_10008698	All Organisms → cellular organisms → Bacteria → Proteobacteria	21269	Open in IMG/M
3300014501\|Ga0182024_11181522	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300014501\|Ga0182024_11386801	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300014655\|Ga0181516_10049047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	2135	Open in IMG/M
3300014657\|Ga0181522_10058180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2185	Open in IMG/M
3300016705\|Ga0181507_1034602	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300016728\|Ga0181500_1204848	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300016728\|Ga0181500_1249948	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300016728\|Ga0181500_1512977	Not Available	765	Open in IMG/M
3300016728\|Ga0181500_1561962	Not Available	735	Open in IMG/M
3300017946\|Ga0187879_10029728	All Organisms → cellular organisms → Bacteria → Proteobacteria	3314	Open in IMG/M
3300017946\|Ga0187879_10143461	All Organisms → cellular organisms → Bacteria → Proteobacteria	1353	Open in IMG/M
3300017948\|Ga0187847_10055754	All Organisms → cellular organisms → Bacteria → Proteobacteria	2240	Open in IMG/M
3300017948\|Ga0187847_10177731	Not Available	1162	Open in IMG/M
3300017975\|Ga0187782_11338040	Not Available	562	Open in IMG/M
3300018023\|Ga0187889_10137513	Not Available	1169	Open in IMG/M
3300018034\|Ga0187863_10507053	Not Available	676	Open in IMG/M
3300018034\|Ga0187863_10552807	Not Available	646	Open in IMG/M
3300018044\|Ga0187890_10046946	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2583	Open in IMG/M
3300018085\|Ga0187772_10038200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2893	Open in IMG/M
3300018085\|Ga0187772_10905115	Not Available	641	Open in IMG/M
3300019240\|Ga0181510_1164237	Not Available	973	Open in IMG/M
3300019258\|Ga0181504_1146790	Not Available	878	Open in IMG/M
3300019786\|Ga0182025_1347848	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300021168\|Ga0210406_11030562	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300021401\|Ga0210393_10913152	Not Available	712	Open in IMG/M
3300021402\|Ga0210385_11220113	Not Available	577	Open in IMG/M
3300021402\|Ga0210385_11293577	Not Available	559	Open in IMG/M
3300021407\|Ga0210383_10587162	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300021420\|Ga0210394_10000683	All Organisms → cellular organisms → Bacteria → Proteobacteria	65176	Open in IMG/M
3300021420\|Ga0210394_10017727	All Organisms → cellular organisms → Bacteria	6689	Open in IMG/M
3300021420\|Ga0210394_11605658	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300021559\|Ga0210409_10141012	All Organisms → cellular organisms → Bacteria → Proteobacteria	2211	Open in IMG/M
3300021559\|Ga0210409_11108098	Not Available	667	Open in IMG/M
3300022873\|Ga0224550_1033322	Not Available	733	Open in IMG/M
3300025453\|Ga0208455_1038487	Not Available	1063	Open in IMG/M
3300027432\|Ga0209421_1062613	Not Available	746	Open in IMG/M
3300027641\|Ga0208827_1068576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1129	Open in IMG/M
3300027652\|Ga0209007_1126867	Not Available	638	Open in IMG/M
3300027696\|Ga0208696_1007009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4977	Open in IMG/M
3300027737\|Ga0209038_10013110	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300027768\|Ga0209772_10237132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	579	Open in IMG/M
3300027829\|Ga0209773_10044466	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300027853\|Ga0209274_10024544	All Organisms → cellular organisms → Bacteria → Proteobacteria	2762	Open in IMG/M
3300027853\|Ga0209274_10407461	Not Available	702	Open in IMG/M
3300027860\|Ga0209611_10017154	Not Available	9121	Open in IMG/M
3300027860\|Ga0209611_10146840	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300027860\|Ga0209611_10560032	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300027867\|Ga0209167_10391880	Not Available	757	Open in IMG/M
3300027889\|Ga0209380_10090571	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300027895\|Ga0209624_10068395	All Organisms → cellular organisms → Bacteria	2290	Open in IMG/M
3300027908\|Ga0209006_10006288	All Organisms → cellular organisms → Bacteria → Proteobacteria	10759	Open in IMG/M
3300028566\|Ga0302147_10278344	Not Available	556	Open in IMG/M
3300028747\|Ga0302219_10013603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3043	Open in IMG/M
3300028747\|Ga0302219_10249498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	688	Open in IMG/M
3300028748\|Ga0302156_10167686	Not Available	1054	Open in IMG/M
3300028780\|Ga0302225_10225167	Not Available	898	Open in IMG/M
3300028808\|Ga0302228_10092734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1419	Open in IMG/M
3300028813\|Ga0302157_10479367	Not Available	653	Open in IMG/M
3300028879\|Ga0302229_10366615	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300029911\|Ga0311361_10282372	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300029943\|Ga0311340_11221094	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300029945\|Ga0311330_11158445	Not Available	562	Open in IMG/M
3300029999\|Ga0311339_10065434	All Organisms → cellular organisms → Bacteria → Proteobacteria	4731	Open in IMG/M
3300029999\|Ga0311339_10352558	Not Available	1555	Open in IMG/M
3300030007\|Ga0311338_10419142	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300030529\|Ga0210284_1685673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	755	Open in IMG/M
3300030618\|Ga0311354_11445957	Not Available	610	Open in IMG/M
3300030659\|Ga0316363_10015847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4262	Open in IMG/M
3300030659\|Ga0316363_10192914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	852	Open in IMG/M
3300030737\|Ga0302310_10308118	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300030740\|Ga0265460_12137058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	587	Open in IMG/M
3300030743\|Ga0265461_13672452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	521	Open in IMG/M
3300030743\|Ga0265461_13846114	Not Available	511	Open in IMG/M
3300031234\|Ga0302325_11888990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	743	Open in IMG/M
3300031234\|Ga0302325_12684335	Not Available	588	Open in IMG/M
3300031236\|Ga0302324_100015530	All Organisms → cellular organisms → Bacteria → Proteobacteria	15273	Open in IMG/M
3300031236\|Ga0302324_100532619	Not Available	1705	Open in IMG/M
3300031236\|Ga0302324_101389605	Not Available	920	Open in IMG/M
3300031236\|Ga0302324_101616455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	834	Open in IMG/M
3300031236\|Ga0302324_101723980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	800	Open in IMG/M
3300031525\|Ga0302326_10907360	Not Available	1252	Open in IMG/M
3300031525\|Ga0302326_11048071	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300031525\|Ga0302326_11227028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
3300031708\|Ga0310686_102803307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	559	Open in IMG/M
3300031708\|Ga0310686_107415094	All Organisms → cellular organisms → Bacteria → Proteobacteria	1741	Open in IMG/M
3300031708\|Ga0310686_113686897	All Organisms → cellular organisms → Bacteria → Proteobacteria	3143	Open in IMG/M
3300031708\|Ga0310686_117062276	All Organisms → cellular organisms → Bacteria	6693	Open in IMG/M
3300032515\|Ga0348332_11975718	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	563	Open in IMG/M
3300032895\|Ga0335074_10001547	All Organisms → cellular organisms → Bacteria → Proteobacteria	31222	Open in IMG/M
3300033402\|Ga0326728_10034205	All Organisms → cellular organisms → Bacteria → Proteobacteria	8338	Open in IMG/M
3300034124\|Ga0370483_0316881	Not Available	539	Open in IMG/M
3300034163\|Ga0370515_0114978	Not Available	1159	Open in IMG/M
3300034199\|Ga0370514_103246	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300034282\|Ga0370492_0042684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium hankyongense	1866	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.68%
Host-Associated	Host-Associated	4.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.47%
Aquatic	Environmental → Aquatic	30.22%
Plants	Host-Associated → Plants	4.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.60%
Freshwater	Environmental → Aquatic → Freshwater	29.50%
Peat	Environmental → Terrestrial → Peat	20.14%
Peat Moss	Host-Associated → Plants → Peat Moss	4.32%
Sediment	Environmental → Aquatic → Sediment	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	29.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.39%
Loam	Environmental → Terrestrial → Soil → Loam	10.07%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	4.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	25.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.47%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	4.32%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	15.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.35%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.32%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	4.32%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.60%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.88%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.16%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.16%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030529	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE013SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100005407	3300000567	Peatlands Soil	MKRLIMLVVPLAILVLTGCVVAPARGYYYHPRAVVVAPAPVVVVRP*
JGI12270J11330_100244245	3300000567	Peatlands Soil	MRRVFAVLIPVSLLALAGCVVSPRPGYYYGPRAVVVAPAPAVVIRP*
JGI12712J15308_101888412	3300001471	Forest Soil	MKRLIMLVVPIAMLSLAGCVVAPARGYYYHPRAIVVAPAPVVVVRP*
JGI12635J15846_103259071	3300001593	Forest Soil	FRLLIPVTLLALAAGCVVAPRPGYYYGPRAVIVAPAPAVVIRPY*
Ga0062384_1008345902	3300004082	Bog Forest Soil	MKRLFISVISLGFLALTGCVVVPARGYYYHPAAVVMAPAPIIAVRP*
Ga0062389_1012271062	3300004092	Bog Forest Soil	MKRLMLLLIPISLLAGCVVVPARGYYYGPRAVVVAPAPALIVRP*
Ga0062389_1016797832	3300004092	Bog Forest Soil	MKRLIMLAAPLSVLLLAGCVVAPARGYYYYPRAVVMAPAAAVVIRP*
Ga0062389_1031293972	3300004092	Bog Forest Soil	MKRLIMLGVPMAMLALAGCVVAPARGYYYHPRAIVVAPAPVVVVRP*
Ga0062386_1002816762	3300004152	Bog Forest Soil	MKRLIMLVAPMSLLLLAGCVVAPARGYYYYHPRAVVVAPAPAVLIRP*
Ga0070731_105422963	3300005538	Surface Soil	MKRLLILVPLTVLTLAGCVVAPARGYYYHPRAVVVAPAPVLVVRP*
Ga0070733_100153463	3300005541	Surface Soil	MKRLLLLLIPVSVLALQGCVVVPAHGYYYGPRAVVVAPAPALIVRP*
Ga0070733_104690382	3300005541	Surface Soil	MKRLIMSLAPLAILMLTGCVVAPARGYYYHPRAVVVAPAPVVVLRP*
Ga0070761_100542274	3300005591	Soil	MIKRLMLVLIPVSLMALQGCVVVPAHGYYYGPRAVVVAPAPAVVIRP*
Ga0070761_101673562	3300005591	Soil	MKRLLMLIPLTVLTLAGCVVAPARGYYYYHPRAVAVVPPPAIIVRP*
Ga0070761_103479522	3300005591	Soil	MKRLIMLLAPLGILALTGCVVAPARGYYYHPAAVVVAPAPVVYVRP*
Ga0070763_102570452	3300005610	Soil	VTLLALATGCVVAPRPGYYYGPRAVIVAPAPAVVIRPY*
Ga0070766_112288531	3300005921	Soil	LTLLVLAGCVVAPGRGYYYHPRVVAVVPPPVVVLRP*
Ga0075030_1014626431	3300006162	Watersheds	MSTIIKLLIPIGFLALAGCVVAPYGYHRGYYYEGPRAV
Ga0116229_100266924	3300009500	Host-Associated	MCRFIKYLIPVAALALAGCVVAPERGYYYGPRAVVVAPAPVVVVRPYGWYR*
Ga0116229_100273285	3300009500	Host-Associated	MKRIFKYLLPVAVLALAGCVMAPARGYYYGPRAVVVAPAPVVVVHPYGWYRY*
Ga0116229_115382142	3300009500	Host-Associated	MRRLLTLLIPLSFLALAGCVVAPARGYYGGPRAVVVAPAPVVVVHPYGWYRY*
Ga0116125_10706701	3300009628	Peatland	MKRIFKFLIPLSVLALAGCVVAPARGYYYHPHAVIVAPAPVVVVRP*
Ga0116129_10066985	3300009633	Peatland	MKRLIMLMPLTLLVLAGCVVAPARGYYYYHPRAVAVVPAPVVLVRP*
Ga0116110_10765171	3300009643	Peatland	SHLRRQEMKRLIMLVVPLGILVLTGCVVAPARGYYYHPRAVVVAPAPVVVVRP*
Ga0105854_13942702	3300009660	Permafrost Soil	LRARCDLGGCPMKRLLMSIIPLSALILAGCVVAPARGYYYGPRFVAVAPAPVVVVRP*
Ga0116101_10295102	3300009759	Peatland	MKRIIKILIPLSVLALAGCVVAPARGYYYHPHAVIVAPAPVVVVRP*
Ga0074045_103138512	3300010341	Bog Forest Soil	MKRLLISAISLCFLALAGCVVVPARGYYYHPAAVVVAPAPIVAVRM*
Ga0074045_106181332	3300010341	Bog Forest Soil	MKRLIMLVAPMSLLLLAGCVVAPARGYYYYHPRAVVVA
Ga0074044_100644692	3300010343	Bog Forest Soil	MKRLFISVISLGFLALTGCVVVPARGYYYHPAAVVVAPAPIIAVRP*
Ga0181521_101939732	3300014158	Bog	MDDPSRRQTMKRLIMSLVPISVLLLAGCVVAPARGYYYYPRAMVVAPAPAILVRP*
Ga0181538_100794532	3300014162	Bog	MLMVLIPMSLMALQGCVVAPARGYYYGPRAVVVAPAPAVIVRP*
Ga0181534_101078642	3300014168	Bog	MKRLFKLLVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVEVHPYGWYRY*
Ga0181534_101204211	3300014168	Bog	MKRLLMSIIPLSALILAGCVVAPARGYYYGPRFVAVAPAPVVVVRP*
Ga0181534_105283572	3300014168	Bog	MKRLFKLLVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPAVVVHPYGW*
Ga0181534_107953062	3300014168	Bog	MKRLLISAISLGFLALAGCVVVPARGYYYHPAAVVVAPAPVIAVRP*
Ga0181531_105016142	3300014169	Bog	MKRLFKLMVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPAVVVHPYGW*
Ga0181526_100858571	3300014200	Bog	MNRLLKVLTPMLLLATAGCVVVPAHRGYWGGPHVAVVAPAPVVVVHPYGW*
Ga0181537_100165883	3300014201	Bog	MKRLMLLLIPLSLLAGCVVAPARGYYYGPRAVVVAPAPAFIVRP*
Ga0181537_101285253	3300014201	Bog	MKRLLISAISLGFLALAGCVVVPARGYYYHPAAVVVA
Ga0181537_112478541	3300014201	Bog	QRLLSGERPMKRLFKLMVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVVVHPYGW*
Ga0182018_100431762	3300014489	Palsa	MKRLMLLLIPLSLLAGCVVVPGRGYYYGPRAVVVAPAPAFIVRP*
Ga0182015_100331843	3300014495	Palsa	MKRLMLLLIPLSMLAGCVVAPARGYYYGPRAVVVAPAPAFIVRP*
Ga0182015_101540891	3300014495	Palsa	MKRLIMLLIPLGILALSGCVVAPARGYYYHPAAVVVAPAPVLLVRP*
Ga0182015_104855052	3300014495	Palsa	MKRLLTLLIPVGLMALSGCVVAPARGYYYGPRAVIVAPAAAFVVRP*
Ga0182024_1000869810	3300014501	Permafrost	MKRLIMSVIPLGMLVLAGCVVAPARGYYYHPRAVVVAPAPVVVVRP*
Ga0182024_111815221	3300014501	Permafrost	MKRLLKFLVPVSLLALTGCVVAPARGVYYGPRAVVVAPAPAVVVRPYGWYRY*
Ga0182024_113868011	3300014501	Permafrost	MKRLIMLVIPLGMLVLAGCVVAPARGYYYHPRAVVVAPAPVLVVRP*
Ga0181516_100490472	3300014655	Bog	MKRLFKLMVAVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVEVRPYGWYHY*
Ga0181522_100581803	3300014657	Bog	MKRLFKLMVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVVVHPYGW*
Ga0181507_10346021	3300016705	Peatland	ANVIKRMLMVLIPMSLMALQGCVVAPARGYYYGPRAVVVAPAPAVIVRP
Ga0181500_12048481	3300016728	Peatland	IRRPKMKRLLTVLVPLALLSLQGCVVAPARGYYYGPHPVIVAPAPVVVIR
Ga0181500_12499481	3300016728	Peatland	MKRLFKLLVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVEVHPYGWYRY
Ga0181500_15129771	3300016728	Peatland	RCDLGECPMKRLLMSIIPLSALILAGCVVAPARGYYYGPRFVAVAPAPVVVVRP
Ga0181500_15619622	3300016728	Peatland	SGERKMKRLFKLMVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVEVRPYGWYHY
Ga0187879_100297284	3300017946	Peatland	MKRLIMLVVPLAILVLTGCVVAPARGYYYHPRAVVVAPAPVVVVRP
Ga0187879_101434612	3300017946	Peatland	MNRLLKVLTPMLLLATAGCVVVPAHRGYWGGPHVAVVAPAPVVVVHPYGW
Ga0187847_100557542	3300017948	Peatland	MKRIIKILIPLSVLALAGCVVAPARGYYYHPHAVIVAPAPVVVVRP
Ga0187847_101777312	3300017948	Peatland	MKRLLMSIIPLSALILAGCVVAPARGYYYGPRFVAVAPAPVIVVRP
Ga0187782_113380401	3300017975	Tropical Peatland	MRRLFGLLMPVALLLLSGCVVAPRPGYYYYGPRAVVVAPAPAVVVRP
Ga0187889_101375131	3300018023	Peatland	SHLRRQEMKRLIMLVVPLAILVLTGCVVAPARGYYYHPRAVVVAPAPVVVVRP
Ga0187863_105070532	3300018034	Peatland	MKRLMMLVVPLGMLVLSGCVVAPARGYYYHPAAVVVAPAPVLLVRP
Ga0187863_105528072	3300018034	Peatland	MKRLMLLLIPISLLAGCVVAPARGYYGYYGPRAVVVAPAPAIFVRP
Ga0187890_100469463	3300018044	Peatland	MLMVLIPMSLMALQGCVVAPARGYYYGPRAVVVAPAPAVIVRP
Ga0187772_100382006	3300018085	Tropical Peatland	MKRLRTVLIALGILALTGCVVAPRPGYYYGYGPRAVVVAPAPAVVIRP
Ga0187772_109051151	3300018085	Tropical Peatland	MKRLAILLIPLSFLALAGCEVVPARGYYWHPRAMVVAPAPLVAVRPW
Ga0181510_11642371	3300019240	Peatland	MKRLLMSIIPLSALILAGCVVAPARGYYYGPRFVAVAPAPVVVVRP
Ga0181504_11467902	3300019258	Peatland	CDLGECPMKRLLMSIIPLSALILAGCVVAPARGYYYGPRFVAVAPAPVVVVRP
Ga0182025_13478481	3300019786	Permafrost	MKRLIMSVIPLGMLVLAGCVVAPARGYYYHPRAVVVAPAPVVVVRP
Ga0210406_110305621	3300021168	Soil	MKRLILLMLPLSFLTLAGCVVAPARGYYYYHPRAVVVAPAPVVVVRP
Ga0210393_109131522	3300021401	Soil	MKRLMMLIPLTLLTLAGCVVAPARGYYYYHPHAVAVVPARAVFVRP
Ga0210385_112201131	3300021402	Soil	MKRLIMLVVPMAMLALAGCVVAPARGYYYHPRAIVVAPAPVVVVRP
Ga0210385_112935771	3300021402	Soil	LLAPMTILVLTGCVVAPARGYYYHPRAVVVAPAPVVVVRP
Ga0210383_105871622	3300021407	Soil	MKRLIMLVVPIAMLSLAGCVVAPARGYYYHPRAIVVAPAPVVVVRP
Ga0210394_1000068330	3300021420	Soil	MKRLIMLVVPLGVFVLTGCVVAPARGYYYHPRAVVVAPAPVVVVRP
Ga0210394_100177273	3300021420	Soil	MKRLIMLVIPLGMLVLAGCVVAPARGYYYHPRAVVVAPAPVLVVRP
Ga0210394_116056581	3300021420	Soil	PLGVLVLAGCVVAPARGYYYHPRAVVVAPAPVLIVRP
Ga0210409_101410124	3300021559	Soil	MKRLMILIPLTLLTLAGCVVAPARGYYYYHPRAVAVVPAPAIIVRP
Ga0210409_111080981	3300021559	Soil	MKRLLMLIPLTVLALAGCVVAPARGYYYYHPRAVVVAPAPVVVVRP
Ga0224550_10333222	3300022873	Soil	MKRLIMLLAPLGILALTGCVVAPARGYYYHPAAVVVAPAPMVYVRP
Ga0208455_10384871	3300025453	Peatland	RQEMKRLIMLVVPLAILVLTGCVVAPARGYYYHPRAVVVAPAPVVVVRP
Ga0209421_10626132	3300027432	Forest Soil	MKRLIMLAAPIALLLLAGCVVAPARGYYYYHPRAVIVAPAPAVILRP
Ga0208827_10685761	3300027641	Peatlands Soil	VFAVLIPVSLLALAGCVVSPRPGYYYGPRAVVVAPAPAVVIRP
Ga0209007_11268672	3300027652	Forest Soil	MKRLIMLLAPMTILVLTGCVVAPARGYYYHPRAVVVAPAPVVVVRP
Ga0208696_10070093	3300027696	Peatlands Soil	MRRVFAVLIPVSLLALAGCVVSPRPGYYYGPRAVVVAPAPAVVIRP
Ga0209038_100131102	3300027737	Bog Forest Soil	MKRLFISVISLGFLALTGCVVVPARGYYYHPAAVVMAPAPIIAVRP
Ga0209772_102371322	3300027768	Bog Forest Soil	MKRLLISVISLGFLALAGCVVVPARGYYYHPAAVVVAPAPVVAVRM
Ga0209773_100444662	3300027829	Bog Forest Soil	MKRLLISVISLGFLALAGCVVVPARGYYYHPAAVVVAPAPIIAVRP
Ga0209274_100245441	3300027853	Soil	MKRLLMLIPLTVLTLAGCVVAPARGYYYYHPRAVAVVPPPAIIVRP
Ga0209274_104074612	3300027853	Soil	MIKRLMLVLIPVSLMALQGCVVVPAHGYYYGPRAVVVAPAPAVVIRP
Ga0209611_100171545	3300027860	Host-Associated	MKRIFKYLLPVAVLALAGCVMAPARGYYYGPRAVVVAPAPVVVVHPYGWYRY
Ga0209611_101468402	3300027860	Host-Associated	MRRFIKYLIPVAALALAGCVVAPERGYYYGPRAVVVAPAPVVVVRPYGWYR
Ga0209611_105600322	3300027860	Host-Associated	MKRLMMLIPLTLLTLAGCVVAPARGYYYYHPRAVVVVPPPEVIVRP
Ga0209167_103918802	3300027867	Surface Soil	AGTFIFRRQEMKRLIMLLAPLTMLVLTGCVVAPARGYYYHPRAVVVAPEPVVVVRP
Ga0209380_100905713	3300027889	Soil	MKRLLMLIPLTVLTLAGCVVAPARGYYYYHPRAVAV
Ga0209624_100683952	3300027895	Forest Soil	MKRLIMLVIPIGMLVLAGCVVAPARGYYYHPHAVVVAPAPVVVVRP
Ga0209006_100062885	3300027908	Forest Soil	MKRLIMLLAPLTILVLTGCVVAPARGYYYHPRAVVVAPEPVVVVRP
Ga0302147_102783441	3300028566	Bog	MKRLIKLLVPVTLLALAGCVVAPARGYYYGPRAVVVAP
Ga0302219_100136032	3300028747	Palsa	MKRLMLLLIPISLLAGCVVVPARGYYYGPRAVVVAPAPALIVRP
Ga0302219_102494982	3300028747	Palsa	MKRLMLLLIPLSLLAGCVVVPGRGYYYGPRAVVVAPAPAFIVRP
Ga0302156_101676863	3300028748	Bog	MKRLIKLLVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVEVHPYGWYRY
Ga0302225_102251671	3300028780	Palsa	MKRLLILLIPVGMMALSGCVVAPARGYYYGPRAVIVAPAPAFVVRP
Ga0302228_100927342	3300028808	Palsa	MKRLIMLLAPLGILVLTGCVVAPARGYYYYPRAVVVAPAPIVVVRP
Ga0302157_104793672	3300028813	Bog	MQRLFKLMVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVAVHPYGWYHY
Ga0302229_103666151	3300028879	Palsa	MKRLFTLLIPLSFLALAGCVVAPYGRPYYYGPRIAVVAPAPVVVVRP
Ga0311361_102823724	3300029911	Bog	MKRLIKLLVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPGGEVHPYGW
Ga0311340_112210942	3300029943	Palsa	MKRIMLLLIPLSLLAGCVVVPARGYYYGPRAVVVAPAPALIVRP
Ga0311330_111584451	3300029945	Bog	MKQLFRWMVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPAVVVHPYGWYRY
Ga0311339_100654342	3300029999	Palsa	MRRLFTLLIPLSFLALAGCVVAPGPGYYYGPRAVVVAPAPVVAVRPYGWYHY
Ga0311339_103525582	3300029999	Palsa	MKRLIMLLAPLGILALTGCVVAPARGYYYHPAAVVVAPAPVVYVRP
Ga0311338_104191421	3300030007	Palsa	SGDGHMQRIIKFLIPLSMLALAGCVVAPARGYYYHPYGVVVAPPVVVVRP
Ga0210284_16856731	3300030529	Soil	RLFISVISLGFLALAGCVVVPARGYYYHPAAVVVAPAPIIAVRP
Ga0311354_114459571	3300030618	Palsa	LLIPLSLLAGCVVVPGRGYYYGPRAVVVAPAPAFIVRP
Ga0316363_100158478	3300030659	Peatlands Soil	MRRVFAVLIPVSLLALAGCVVSPRPGYYYGPRAVVVAPAPA
Ga0316363_101929141	3300030659	Peatlands Soil	IDGNLEETDMRRVFAVLIPVSLLALAGCVVSPRPGYYYGPRAVVVAPAPAVVIRP
Ga0302310_103081181	3300030737	Palsa	PMKRLFTLLIPLSFLALAGCVVAPYGRPYYYGPRIAVVAPAPVVVVRP
Ga0265460_121370581	3300030740	Soil	LIMLMPLTLLVLAGCVVAPGRGYYYHPRVVAVVPPPVVVVRP
Ga0265461_136724521	3300030743	Soil	RLLISALSLGFLALAGCVVVPARGYYYHPAAVVVAPAPVVAVRM
Ga0265461_138461142	3300030743	Soil	RRQAMNRLIMLVIPLGILVLAGCVVAPARGYYYHPRAVVVAPAPVVVVRP
Ga0302325_118889901	3300031234	Palsa	MKRLIMSVLPLGILALSGCVVAPARGYYYYHPHAVVVAPAPVVVVRP
Ga0302325_126843351	3300031234	Palsa	MKRIIKLLIPLSVLALAGCVVAPARGYYYHPYGVVVAPAPVVVVRP
Ga0302324_10001553010	3300031236	Palsa	MKPVLKLMVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVAVRPYGWYHY
Ga0302324_1005326192	3300031236	Palsa	MKRLMLLLIPLSLLAGCVVVPARGYYYGPRAVVVAPAPALIVRP
Ga0302324_1013896052	3300031236	Palsa	MKRLFKLMVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVVVHPYGW
Ga0302324_1016164551	3300031236	Palsa	MKRLIMLVLPLGILVLSGCVVAPARGYYYHPGAVVVAPAPVVVVRP
Ga0302324_1017239802	3300031236	Palsa	MKRIMLLLIPLSLLAGCVVVPARGYYYGPRAVVVAPGPALIMRP
Ga0302326_109073602	3300031525	Palsa	MQRIIKFLIPLSMLALAGCVVAPARGYYYHPYGVVVAPPVVVVRP
Ga0302326_110480712	3300031525	Palsa	MKRLIMLLIPLGILALSGCVVAPARGYYYHPAAVVVAPAPVLLVRP
Ga0302326_112270283	3300031525	Palsa	MKRLIMLLAPLGILALTGCVVAPARGYYYHPAAVVVAPAPM
Ga0310686_1028033072	3300031708	Soil	MKRLIMLVLPLGMLALSGCVVAPARGYYYYHPHAVVVAPAPVVVVRP
Ga0310686_1074150942	3300031708	Soil	MKRMFTLLIPASLLLLAGCVVAPARGYYDGPRAVVVAPAPVVVVRPYGWYRY
Ga0310686_1136868972	3300031708	Soil	MKRLIMLVLPLGMLALSGCVVAPARGYYYYHPHAYVVAPAPVVVVRP
Ga0310686_1170622764	3300031708	Soil	MKRLIMLLAPLGILALTGCVVAPARGYYYHPAAVVV
Ga0348332_119757182	3300032515	Plant Litter	RREMKRLIMLLAPLGILALTGCVVAPARGYYYHPAAVVVAPAPVVYVRP
Ga0335074_1000154717	3300032895	Soil	MKRLFMLLIPLGFLALSGCVVVPARGYYYHPRAMVVVPAPVVFVRP
Ga0326728_100342052	3300033402	Peat Soil	MKRLLMFTIPLSALILAGCVVAPARGYYYGPRFVAVAPAPVVVIRP
Ga0370483_0316881_1_168	3300034124	Untreated Peat Soil	RQSFSGDAHMKRIIRILIPLSMLALAGCVVAPARGYYYHPYGVVVAPAPVVVVRP
Ga0370515_0114978_152_292	3300034163	Untreated Peat Soil	MKRLLTLLIPVGLMALSGCVVAPARGYYYGPRAVIVAPAPAFVVRP
Ga0370514_103246_577_717	3300034199	Untreated Peat Soil	MKRIIKILIPLSMLALAGCVVAPARGYYYHPYGVVVAPAPVVVVRP
Ga0370492_0042684_1350_1508	3300034282	Untreated Peat Soil	MKRLLKLMVPVTLLALAGCVVAPARGYYYGPRAVVVAPAPVVAVRPYGWYHY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055265

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences