NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F055246

Metagenome / Metatranscriptome Family F055246

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F055246
Family Type Metagenome / Metatranscriptome
Number of Sequences 139
Average Sequence Length 74 residues
Representative Sequence MTREEAIAEVERRRAADPGASWIANQRDGDWVVVRIGVAPTKVSGTATKPPPVAPQGDPHSAVERAAWFAGGGG
Number of Associated Samples 106
Number of Associated Scaffolds 139

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 68.35 %
% of genes near scaffold ends (potentially truncated) 35.97 %
% of genes from short scaffolds (< 2000 bps) 77.70 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (53.957 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.022 % of family members)
Environment Ontology (ENVO) Unclassified
(24.460 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.115 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.
1F62_00365860
2Ga0066388_1020108731
3Ga0070682_1006758552
4Ga0070714_1010781052
5Ga0070713_1001213143
6Ga0070713_1013899001
7Ga0070711_1000271022
8Ga0070711_1003202382
9Ga0070734_104171082
10Ga0070730_100412003
11Ga0070730_100444473
12Ga0070730_109458421
13Ga0066699_100511263
14Ga0066903_1017881831
15Ga0066903_1089542071
16Ga0080026_101327441
17Ga0070717_120327251
18Ga0075017_1013784561
19Ga0075017_1016339481
20Ga0070715_101044772
21Ga0066660_100270323
22Ga0079221_111825972
23Ga0116218_11666541
24Ga0116215_12672331
25Ga0116216_100614893
26Ga0116217_110294352
27Ga0134125_101246793
28Ga0126381_1045670372
29Ga0136449_1001045875
30Ga0136449_1001689101
31Ga0136449_1030423772
32Ga0126361_104443321
33Ga0136625_10363023
34Ga0136610_10965111
35Ga0136618_100833683
36Ga0136630_10127973
37Ga0136613_100296743
38Ga0164299_100222242
39Ga0164302_111308402
40Ga0168317_10211862
41Ga0164309_100830602
42Ga0120155_11444962
43Ga0167624_10164182
44Ga0167623_100170310
45Ga0167638_10681201
46Ga0182036_117168072
47Ga0182034_102399391
48Ga0182040_106939721
49Ga0182039_121283592
50Ga0136617_101114184
51Ga0187808_102634231
52Ga0187779_106441872
53Ga0187778_100390134
54Ga0187778_103192821
55Ga0187776_100065589
56Ga0187776_101661922
57Ga0187776_103654662
58Ga0187776_110744001
59Ga0187780_113133012
60Ga0187777_100304663
61Ga0187777_100848193
62Ga0187777_102653091
63Ga0187777_106019532
64Ga0187777_106143201
65Ga0187777_110304542
66Ga0187823_100251523
67Ga0187822_100745811
68Ga0187766_100138757
69Ga0187766_102044011
70Ga0187774_108639732
71Ga0193751_10110281
72Ga0210395_101541991
73Ga0210396_113036651
74Ga0213874_102670321
75Ga0210385_115268761
76Ga0210386_108054401
77Ga0210383_104666312
78Ga0210383_111734642
79Ga0210390_103370392
80Ga0126371_133014501
81Ga0208479_10123732
82Ga0207700_106929441
83Ga0207702_108823182
84Ga0208612_10042781
85Ga0209060_104890001
86Ga0209166_100505122
87Ga0209166_102808451
88Ga0209624_108303971
89Ga0308309_108860682
90Ga0310037_100268383
91Ga0310037_102957332
92Ga0170824_1168613191
93Ga0170820_135337152
94Ga0318516_101776173
95Ga0318534_100864243
96Ga0318534_103243712
97Ga0318571_101286201
98Ga0318571_103228601
99Ga0318573_103054822
100Ga0318561_101963501
101Ga0318561_108183232
102Ga0318574_102884361
103Ga0318572_109233312
104Ga0307474_103211881
105Ga0307474_110749601
106Ga0302321_1022163131
107Ga0318501_102224283
108Ga0307477_109542892
109Ga0318554_106670112
110Ga0318546_108989601
111Ga0318543_104625662
112Ga0318566_106656212
113Ga0318564_102875652
114Ga0318499_102459941
115Ga0318495_103761241
116Ga0306925_118623231
117Ga0318551_106095993
118Ga0318520_100289923
119Ga0306923_103839853
120Ga0306923_106723941
121Ga0310916_101015401
122Ga0310916_111790792
123Ga0306926_110076222
124Ga0306926_112404071
125Ga0318562_107788111
126Ga0318569_106175802
127Ga0318540_105715391
128Ga0311301_100244884
129Ga0311301_100614314
130Ga0335078_104987922
131Ga0335078_120914121
132Ga0335078_126961491
133Ga0335081_102770222
134Ga0335081_113032061
135Ga0335074_102445514
136Ga0335074_102939172
137Ga0335075_105314762
138Ga0335083_108005442
139Ga0335076_1000005826
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 21.57%    β-sheet: 13.73%    Coil/Unstructured: 64.71%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MTREEAIAEVERRRAADPGASWIANQRDGDWVVVRIGVAPTKVSGTATKPPPVAPQGDPHSAVERAAWFAGGGGSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
46.0%54.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Polar Desert
Polar Desert Sand
Watersheds
Soil
Terrestrial Soil
Tropical Forest Soil
Glacier Forefield Soil
Surface Soil
Peatlands Soil
Agricultural Soil
Arctic Peat Soil
Permafrost
Soil
Grass Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Tropical Peatland
Permafrost Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Agricultural Soil
Fen
Weathered Mine Tailings
Corn Rhizosphere
Plant Roots
Boreal Forest Soil
4.3%2.9%5.0%7.9%23.0%6.5%7.2%12.2%5.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_003658602170459010Grass SoilMTHDEAVAEVERRRAAEPGVSWIATQRDGDWIVASVGVAPVEVTGTATKPPPAAPQSDPHSAVERAAWFAGGGA
Ga0066388_10201087313300005332Tropical Forest SoilMTHEEAIAEAKRRQASDPDTSWIATSRDGEWMVVRIGVAPTKVTGTATKPPPIAPQDDPHSAIERAVWFAGGGG*
Ga0070682_10067585523300005337Corn RhizosphereMTRDEAIAEVERRRAAEPGVSWIATQRDGDWVVASVGVTPVEVTGTATKPPPAAPQSDPHSAVERAAWFAGGGA*
Ga0070714_10107810523300005435Agricultural SoilMTRDEAIAEVERRRAAEPGVSWIATQQDGDWIVASVGVAPVEVTGTATKPPPAGPQSDPHSAVERAAWFAGGGA*
Ga0070713_10012131433300005436Corn, Switchgrass And Miscanthus RhizosphereMTRDEASAEVQRRRAEEPGVSWIATERDGDWVVARVGLAPTEVTDGDEATARRAQSDPHSVVERAAWFAGGGA*
Ga0070713_10138990013300005436Corn, Switchgrass And Miscanthus RhizosphereMTRDEAIAEVERRRAAEPGVSWIATQRDGDWIVASVGVAPVEVTGTATKPPPAGPQSDPHSAVERAAWFAGGGA*
Ga0070711_10002710223300005439Corn, Switchgrass And Miscanthus RhizosphereMAEVARRKAADPGVSWIATQRDGDWVVARVGVAPTEVTGTATKPPPQAPQSDPHSAVERAAWFAGGGG*
Ga0070711_10032023823300005439Corn, Switchgrass And Miscanthus RhizosphereMTRDEAIAEVQRRRAAEPGVSWIATQRDEDWIVASVGVAPVEVTGTATKPPPAAPQSDPHSAVERAAWFAGGGA*
Ga0070734_1041710823300005533Surface SoilVEYLGFMTRDEALAEVERKRAADPGASWIAAEREGDWVVVRVGVAPTKVTGTATKPPPVAPQGDPHSAIERAAWFAGSGG*
Ga0070730_1004120033300005537Surface SoilMTRDEALAEVERKRAADPGATWIAAEREGDWVVVRLGVAPTKVTGTATKPPPVAPQGDPHSAIERAAWFAGSGG*
Ga0070730_1004444733300005537Surface SoilMTRDEAIAEVERRRAAEPGAGWIATDRGGDWMVVRVGVAPTKVTGTATKPPPVAPQGDPHSAIERAAWFAGGGG*
Ga0070730_1094584213300005537Surface SoilRAGGHPGWGYPELMTRDEATAEVERRRAAEPGVSWIATQRGGDWVVVRVGVAPTKVTGTATKPPPIAPQDDPHSAIERAAWFAGGGG*
Ga0066699_1005112633300005561SoilMTREEAIAEVERRQTVDPGATWVASQRMGDWIVVRIGVAPTKVTGTATKPPPVAPRDDPHSAIERASWFAGGGS*
Ga0066903_10178818313300005764Tropical Forest SoilEAKRRQASDPDTSWIATSRDGEWMVVRIGVAPTKVTGTATKPPPVAPQDDPHSAIERAVWFAGGGG*
Ga0066903_10895420713300005764Tropical Forest SoilMAQVERRRAADPGASWIANERDGDWVVVRIGVAPAKVTGTATKPPPVTPQGDPHSAIERAAWFAGGGA*
Ga0080026_1013274413300005952Permafrost SoilMTREEAIAAAKRMQTSDPDASWIATEQDGEWTVVRIGVVPTKSTGTATKPPPVAPRDDPHTPIERAAWFAGGGG*
Ga0070717_1203272513300006028Corn, Switchgrass And Miscanthus RhizosphereMTRDEAIAEVERRRAAEPGVSWIATERDGDWIVASVGVAPTEVTGTATKPPPAAPQSDPHSPVERAAWFAG
Ga0075017_10137845613300006059WatershedsILGPVNRHESPEGRISYRAGGGPWGYPEPMTRDEAIAEVERRRAADPSASWIATQRDGEWIVARVGVAPTKVTGTATKPPPVAPQGDPHSAIERATWFAGSGG*
Ga0075017_10163394813300006059WatershedsMTREEAIAEVERRRAADPGASWIANERDGDWVVVRIGVAPNKATGTATKPPPVAPQGDPHSAVERAAWFAGGGG*
Ga0070715_1010447723300006163Corn, Switchgrass And Miscanthus RhizosphereMTRDEAMAEVARRKAADPGVSWIATQRGGDWVVARVGVAPTEVTGTATKPPPQAPQSDPHSAVERAAWFAGGGG*
Ga0066660_1002703233300006800SoilMTREEAIAEVERRQTVDPGATWVASQRMGDWIVVRIGVAPTKVTGTATKPPPVAPRDDPHSAIERAAWFAGGGS*
Ga0079221_1118259723300006804Agricultural SoilMTRDEATTEVERRRTADPGASWIASQRDGDWIVMRVGVAPTKVTGTATKPPPVAPQGDPHSAIERAAWFAGGGG*
Ga0116218_116665413300009522Peatlands SoilMVDRHRAAGIVKVMTRQEAMAEVERRRAADPGASWIASRRDGDWIVVRLGVAPTKVVGTATKPPPVPPRDDPHSAIERAAWFAGGVS*
Ga0116215_126723313300009672Peatlands SoilVSDPDAAWVATRRRGEWAVARIALAPIMASGTATKPPPAAPRDDPHSPIERAAWFAAGG*
Ga0116216_1006148933300009698Peatlands SoilMTYEEAIAEVERRRVSDPDAAWVATRRRGEWAVARIALAPIMASGTATKPPPAVPRDDPHSPIERAAWFAAGG*
Ga0116217_1102943523300009700Peatlands SoilMTNEEAIAEVERRRVSDPDAAWVATRRRGEWAVARIALAPIMASGTATKPPPAAPRDDPHSPIERAAWFAAGG*
Ga0134125_1012467933300010371Terrestrial SoilMTKDEAMAEVERRRGSEPHASWVATQRDGDWVVARIGIAPVEQTGTATKPPPTAPRADPHSAAERAAWFAGGGG*
Ga0126381_10456703723300010376Tropical Forest SoilMTREQALAEVERRRISNPEATWIATERAGEWTVARIGLAPDKQTGTATKPPPAAPRDDPHSPIERASWFAAGG*
Ga0136449_10010458753300010379Peatlands SoilMTREEAIAEAKRRQASDPDASWIATSLDGAWTVVRIDVAPTKSTGTATKPPPVAPRDDPHSPIERATWFAAGGG*
Ga0136449_10016891013300010379Peatlands SoilMTYEEAIAEVERRRVSDPDAAWVATRRRGEWAVARIALAPIMASGTATKPPPAAPRDDPHSPIERAAWFAAGG*
Ga0136449_10304237723300010379Peatlands SoilMTNEEAIAEVERRRVSDPDAAWVATRRGGEWAVARIAVTPIKASGTATKPPPAAPRDDPHSPIERAAWFAAGG*
Ga0126361_1044433213300010876Boreal Forest SoilMTREEAIAEVERRRAADPGASWIANQRDGDWVVVRIGVAPTKVSGTATKPPPVAPQGDPHSAVERAAWFAGGGG*
Ga0136625_103630233300012091Polar Desert SandLAAVAAVAAVDMTRDEAMAEVKRRRVADPDATWVATPRASEWTVARIGLAPTKQTNTETKPPPVAPRDDPHSPVERGAWFAGLG*
Ga0136610_109651113300012184Polar Desert SandEVRRRRASDPDAGWVATQRANEWIVARIGLAPIKQMGTATKPPPAAPRDDPQSPVERAAWFAGG*
Ga0136618_1008336833300012188Polar Desert SandMTRAEAMAEVRRRRASDPDAGWVATQRANEWIVARIGLAPIKQKGTATKPPPAAPRDDPHSPVERAGWLAGG*
Ga0136630_101279733300012529Polar Desert SandLAAVAAVAAVDMTRDEAMAEVKRRRVADPDATWVATQRASEWTVARIGLAPTKQTNTETKPPPVAPRDDPHSPVERGAWFAGLG*
Ga0136613_1002967433300012681Polar Desert SandMTRDEAMAEVKRRRVADPDATWVATQRASEWTVARIGLAPTKQTNTETKPPPVAPRDDPHSPVERGAWFAGLG*
Ga0164299_1002222423300012958SoilMTRDEAIAEVERRRAAEPGVSWIATQRDGDWVVASVGVAPAEVTGTATKPPPAAPQSDPHSAVERAAWFAGGGA*
Ga0164302_1113084023300012961SoilEAKRRQASDPGASWIASQRDGDWIVVRVGVAPTEMTGTATKPPPVAPQDDPHSPIERAAWFAGGGG*
Ga0168317_102118623300012982Weathered Mine TailingsMTHEQAIAEVERRRISDPEATWIATQRGKEWTVARIGLAPSKLTGTATQPPPVAPRDDPHSPIERAAWFAAGG*
Ga0164309_1008306023300012984SoilMRRDEALAEVERRRAAEPGVSWIATQRDGDWVVASVGVTPVEVTGTATKPPPAAPQSDPHSAVERAAWFAGGGA*
Ga0120155_114449623300013768PermafrostVDQSALGEYAEPMTREEAIADAKRMQTSDPDASWIATEQDGEWTVVRIGVVPTKSTGTATKPPPVAPRDDPHTPIERAAWFAGGGG*
Ga0167624_101641823300015083Glacier Forefield SoilMTRDEAMAEVERRRVSEPGVTWLATQRDGEWTVARIGLAPTKQTGTAVKPPPVAPQADPHSPLERAIWIAGTGG*
Ga0167623_1001703103300015161Glacier Forefield SoilMTRHKAMAEVERRRVSDPKVTWLATQRDGVWTVARIGLTPSKPTGTAVKPPPVVPQADPHSPLERTIWIAGTGG*
Ga0167638_106812013300015197Glacier Forefield SoilMTREEAIAEVERRRAADPGASWIANQRDGDWIVVRIGLAPTKVTGTATKPPPVSPQGDPHSAVERAAWFAGGGG*
Ga0182036_1171680723300016270SoilMTRQEAIAEAQRRRAADPDASWIASQRDGDWIVVRIGVAPTKVIGTATKPPPVAPRDDPHSAIERAAWFAGGA
Ga0182034_1023993913300016371SoilEAMAEVERRRAADPSASWVASERDGDWIVVRIGLAPTKVTGTATKPPPVAPQDDPHSPIERATWFAGGGG
Ga0182040_1069397213300016387SoilMTRQEAIAEAQRRRAADPDASWIASQRDGDWIVVRIGVAPTKVIGTATKPPPVAPRDDPHSAIERAAWFAGGAS
Ga0182039_1212835923300016422SoilMTREEAIGEAKRREASVPDASWTAPSRDGEWTVARIGVAPTKVTGTATKPPPVAPRDDPHSAIERAAWFAGGPS
Ga0136617_1011141843300017789Polar Desert SandMTRAEAMAEVSRRRASDPDAGWVATQRANEWIVARIGLAPIKQKGTATKPPPAAPRDDPHSPVERAGWLAGG
Ga0187808_1026342313300017942Freshwater SedimentAADPGASWIANQRDGDWVVVRIGVAPIKVTGTATKPPPVAPQDDPHSAIERAAWFAGGGG
Ga0187779_1064418723300017959Tropical PeatlandSRRTPRWGYPELMTRDEAIAEVERRRAAEPGASWIATHRDGDWIVVRVGVAPTKVTGTATKPPPVAPQDDPHSAIERAAWFAGGGG
Ga0187778_1003901343300017961Tropical PeatlandMTREEAIAEAKRRRASDPGASWIASQRDGDWIVVRVGVAPTEVTGTATKPPPVAPQDDPHSPIERAAWFAGGGS
Ga0187778_1031928213300017961Tropical PeatlandRYAEPVTREEVIAEVECRRASDSDGTWIVTQRGNQWMVARIALAPTKVTGTATKPPPVAPRDDPHSAIERAARFAGGG
Ga0187776_1000655893300017966Tropical PeatlandMTRQEAIAEVDRRRAADPSASWIASERDGDWVVVRVGIAPTKVTGTATKPPPVAPQGDPHSAIVRASWFAAGG
Ga0187776_1016619223300017966Tropical PeatlandMTRQEAMAEVERRRAADPGASWIASQRDGDWIVVRIGVAPTKVTGTATKPPPEAPRDDPHSVIERAAWFAGGGSSGG
Ga0187776_1036546623300017966Tropical PeatlandMTREEAIAEAERRRAADPGASLIASQRDGNWIVVRIGVAPTKVTGTATKPPPVAPRDDPHSAIERAAWFAGGVS
Ga0187776_1107440013300017966Tropical PeatlandMTREEAMAEVERRRVAYPDASWIANQRDGDWIVVRIGIAPTKVTGTATKPPPVAPQGDPHSAVERAAWFAGGGG
Ga0187780_1131330123300017973Tropical PeatlandEEAIAEVERRRASDPDGTWIASQRGDEWMVARIALAPTKVTGTATKPPPVAPRDDPHSAIERAAWFAGGG
Ga0187777_1003046633300017974Tropical PeatlandMTRQEAIAEVERRRAADPSASWIATQRDRDWIVVRVGVAPTNVTGTATKPPPLAPRDDPHSPIERAAWFAGAGGAS
Ga0187777_1008481933300017974Tropical PeatlandMTREEAIADAKRRRASDPGASWIASQRDGDWIVVRVGVAPTEVTGTATKPPPVAPQDDPHSPIERAAWFAGGGS
Ga0187777_1026530913300017974Tropical PeatlandMTREEAIAEAERRRAAAASWIASQRDRDWIVVRIGVAPTKVTGTATKPPPVAPRDDPHSAIERAAWFAGGLS
Ga0187777_1060195323300017974Tropical PeatlandMTRQEAIAEVERRRAADPGASWIASASNGDWIVVRIGMAPTKATGTATKPPPVAPQDDPHSPIERATWFAGGGG
Ga0187777_1061432013300017974Tropical PeatlandMTREQAIAEVQRRRAADPAASWIADQRDGDWVVVRIGLAPIKVTGTATKPPPVAPQGDPHSAIERAAWFAGGGG
Ga0187777_1103045423300017974Tropical PeatlandMAALAGERFAEAKRRQASDPDASWIATSRDGEWTVVRIGVAPTKVVGTATKPPPVAPRDDPHSAIERAAWFAGGPS
Ga0187823_1002515233300017993Freshwater SedimentMTRQEAIAEVERRRAADPGASWIASQRNGDWIVVGVGVAPTKVIGTATKPPPVAPRDDPHSTIERAAWFAGGVS
Ga0187822_1007458113300017994Freshwater SedimentSSRRECPELMTREEAIAEAERRRAADSGASWIASQRDRDWIVVRVGVAPTKVTGTATKPPPVAPQDDPHSPIERAAWFAGGGG
Ga0187766_1001387573300018058Tropical PeatlandMTRKEAIAEVERRRASDPDRTWIAAQRGDEWLVARIALAPTKVTGTATKPPPVAPRDDPHSAIERAAWFAGGG
Ga0187766_1020440113300018058Tropical PeatlandMAEVERRRATDPSASWIATQRDGDWIVVRVGVAPTKVTGTATKPPPVAPQDDPHSPIERAAWFAGGGG
Ga0187774_1086397323300018089Tropical PeatlandRVVALVESCVDLQAGAGGGRAPWEYRELMTREEAIAEVERRRAADPGASWIANQRDGDWVVVRIGVAPTKVTGKATKPPPVAPQSDPHSVVERAAWFAGGGG
Ga0193751_101102813300019888SoilMTRDDALAEVERRRASDPDATWLATQRNGEWTVARIGLAPIKPTGTATKPPPVAPQDDPHSAAERAVWFAGSAG
Ga0210395_1015419913300020582SoilMNRDEAMAEVERMRAADPGASWMASERGADWVVVRIGVAPTKVTGTATKPAPVVPQGDPHSGVQRAAWFTGGGG
Ga0210396_1130366513300021180SoilILRVMNRDEAMAEVERMRAADPGASWMASERGADWVVVRIGVAPTKVTGTATKPAPVVPQGDPHSGVQRAAWFTGGGG
Ga0213874_1026703213300021377Plant RootsMTRDEAMAEVERRRAADTSASWIATQRDGEWIVVRVGVAPTKVTGTATKPPPIAPQDDPHSPIERAAWFAGG
Ga0210385_1152687613300021402SoilMNRVEATAEVQRMRAADPGASWMASERDGEWVVVRIGVAPTKVTGTATKPAPVVPQGDPHSGVQRAAWFTG
Ga0210386_1080544013300021406SoilMNRDEAMAEVERMRAADPGASWMASERGADWVVVRIGVAPTKVTGTATKPAPVVPQGDPHSGVQRAAWF
Ga0210383_1046663123300021407SoilMNRDEAIAEVQRMRAEDPGASWMASERGADWVVVRIGLAPTKVTGTATKPPPVAPQGDPHSGVQRAAWFTGGGG
Ga0210383_1117346423300021407SoilMNRDEAMAEVERMRAADPGASWIAREREGGWVVVRIGVAPTKVTGTATKPPPGGPQGDPHSAIERAAWFTGGLG
Ga0210390_1033703923300021474SoilFPQDTRGSRTILRLMNRDEAMAEVERMRAADPGASWMVSERGADWVVVRIGVAPTKVTGTATKPAPVVPQGDPHSGVQRAAWFTGGGG
Ga0126371_1330145013300021560Tropical Forest SoilMTREEAIAEAKRRQASDPDASWIATSRDGGWTVARIGVVSTKPTGTATKPPPVAPRDDPHSPIERAAWFAGGGG
Ga0208479_101237323300025474Arctic Peat SoilVDQSALSDYAEPMTREEAIAAAKRMQTSDPDASWIATEQDGEWTVVRIGVVPTKSTGTATKPPPVAPRDDPHTPIERAAWFAGGGG
Ga0207700_1069294413300025928Corn, Switchgrass And Miscanthus RhizosphereMTRDEASAEVQRRRAEEPGVSWIATERDGDWVVARVGLAPTEVTGTATKPPPAAPQSDPHSAVERAAWF
Ga0207702_1088231823300026078Corn RhizosphereEAIAEVERRRAAEPGVSWIATQRDGDWVVASVGVTPVEVTGTATKPPPAAPQSDPHSAVERAAWFAGGGA
Ga0208612_100427813300027638Polar DesertTQGRLDGSSRASVGGYPDPMTRDEATAEAKRRQASDREGTWIATERGSEWTVARIGVAPTKETGTATKPPPVAPREDAYTPLERAAWIAGSG
Ga0209060_1048900013300027826Surface SoilMTRDEALAEVERKRAADPGASWIAAEREGDWVVVRVGVAPTKVTGTATKPPPVAPQGDPHSAIERAAWFAGSGG
Ga0209166_1005051223300027857Surface SoilMTRDEALAEVERKRAADPGATWIAAEREGDWVVVRLGVAPTKVTGTATKPPPVAPQGDPHSAIERAAWFAGSGG
Ga0209166_1028084513300027857Surface SoilMTRDEAIAEVERRRAAEPGAGWIATDRGGDWMVVRVGVAPTKVTGTATKPPPIAPQDDPHSAIERAAWFAGGGG
Ga0209624_1083039713300027895Forest SoilMNRDEARAEVERMRAADPGASWMASERGADWVVVRIGVAPTKVTGTATKPPPVAPQGDPHSGVQRAAWFTGGGG
Ga0308309_1088606823300028906SoilMNRDEAMAEVERMRAADPGASWMASERGADWVVVRIGVAPTKVTGTATKPAPVVPQGDPH
Ga0310037_1002683833300030494Peatlands SoilMVDRHRAAGIVKVMTRQEAMAEVERRRAADPGASWIASRRDGDWIVVRLGVAPTKVVGTATKPPPVPPRDDPHSAIERAAWFAGGVS
Ga0310037_1029573323300030494Peatlands SoilMTYEEAIAEVERRRVSDPDAAWVATRRRGEWAVARIALAPIMASGTATKPPPAVPRDDPHSPIERAAWFAAGG
Ga0170824_11686131913300031231Forest SoilMTRDEAIAEVERRRAAEPGVSWIATQRDGDWIVASVGLAPVEVTGTATKPPPAAPQSDPHSAVERAAWFAGGGA
Ga0170820_1353371523300031446Forest SoilAEVQRRRAAEPGVSWIATQRDGDWIVASVGLAPVEVTGTATKPPPAAPQSDPHSAVERAAWFAGGGA
Ga0318516_1017761733300031543SoilMTREEAIAEAERRRAADPAASWIASQRDRDWIVVRIGMAPTKVTGTATKPPPVAPRDDPHSAIERAAWFAGGAS
Ga0318534_1008642433300031544SoilMTHEEAIAEVERMRVADPGASWIASQRDGDWIVVRIGVAPTKVIGTATKPPPVAPRDDPHSAIERAAWFAGGAG
Ga0318534_1032437123300031544SoilMNRDEAMAEVERRRAADPSASWVASERDGDWIVVRIGLAPTKVTGTATKPPPVAPQDDPHSPIERATWFAGGGG
Ga0318571_1012862013300031549SoilQRRRAADPDASWIASQRDGDWIVVRIGVAPTKVIGTATKPPPVAPRDDPHSAIERAAWFAGGAG
Ga0318571_1032286013300031549SoilPTNAFCERYGVHRDRAAGILRVMTREEAIAEVERRRAADPDASWIASRRDGAWIVVRIGMAPTKVIGTASQPPPVAPRDDPHSPIERAAWFAGGVS
Ga0318573_1030548223300031564SoilMTRQEAIAEAQRRRAADPDASWIASQRDGDWIVVRIGVAPTKVIGTATKPPPVAPRDDPHSAIERAAWFAGGAG
Ga0318561_1019635013300031679SoilAEAQRRRAADPDASWIASQRDGDWIVVRIGVAPTKVIGTATKPPPVAPRDDPHSAIERAAWFAGGAG
Ga0318561_1081832323300031679SoilMTRDEAIAEVERRRATDPGVTWIATERDGDWVVARIGLAPTKVTGTATKPPPVAPQGDPHSA
Ga0318574_1028843613300031680SoilMNRDEAMAEVERRRAADPSASWVASERDGDWIVVRIGLAPTKVTGTATKPPPVAPQDDPHSPIERATWFA
Ga0318572_1092333123300031681SoilIGAGWRGRHPRTILRPMNRDEAMAEVERRRAADPSASWVASERDGDWIVVRIGLAPTKVTGTATKPPPVAPQDDPHSPIERATWFAGGGG
Ga0307474_1032118813300031718Hardwood Forest SoilMTHEEATAEAKRRQASDPGASWIATSRDGEWTVLRIGVAPTKVTGTATKPPPVAPSHDPHSPIERATWFAGSGG
Ga0307474_1107496013300031718Hardwood Forest SoilMNRDEAMAEVERMRAVDPGASWMASERGADWVVVRIGVAPTKVTGTATKPPPVAPQGDPHSGVQRAAWFAGGGG
Ga0302321_10221631313300031726FenMLTTVYPEFMTHEQAIAEVERRRVSDPDATWVTAQRGGEWAVARIGVAPIKATGTATKPPPAAPRDDPHSPIERAA
Ga0318501_1022242833300031736SoilGKEWKVMTRQEAIAEAQRRRAADPDASWIASQRDGDWIVVRIGVAPTKVIGTATKPPPVAPRDDPHSAIERAAWFAGGAG
Ga0307477_1095428923300031753Hardwood Forest SoilMLKPMTREDAIAEAKRRQAADPDASWIATSRDGEWTVVRVGVVSTKRTGTATKPPPVAPRDDPHSPIERAAWFAGGGG
Ga0318554_1066701123300031765SoilLVSGAPWGYPELMTREEALAEVERRRAADPSSSWIASQRDGAWGVVRIGVAPIEVTGTATKPPPAVPQGDPHSAIERATWFAGGGG
Ga0318546_1089896013300031771SoilTNAFCERYGVHRDRAAGILRVMTREEAIAEVERRRAADPDASWIASRRDGAWIVVRIGMAPTKVIGTASQPPPVAPRDDPHSPIERAAWFAGGVS
Ga0318543_1046256623300031777SoilVNYSELVTRDEAIAEAKRRRDADPGASWIASERDGDWVVVRIGVAPTKVTGTATKPPPVAPQDDPHSATERAAWFAGGGLG
Ga0318566_1066562123300031779SoilMTREEAIAEAERRRAADPAASWIASQRDRDWIVVRIGMAPTKVTGTATKPPPVAPRDDPHSAIERAAWFAGGAG
Ga0318564_1028756523300031831SoilPELMTRDEAMAEVERRRAADSSASWIATQRDGDWIVVRVGVAPTKVTGTATKPPPVAPRDDPHSPIERATWFAGGGG
Ga0318499_1024599413300031832SoilVPMTRDEALAEVERRRATDPSASWIATQRDGDWIVVRVGIAPTKVTGTATKPPPVAPQDDPHSPIERAT
Ga0318495_1037612413300031860SoilAEVERRRAADPSASWVASERDGDWIVVRIGLAPTKVTGTATKPPPVAPQDDPHSPIERATWFAGGGG
Ga0306925_1186232313300031890SoilERRRAADPGASWIASERDGDWIVARVGIAPTRVTGTATKPPPVAPRDDPHSAIERAAWFAGGGLG
Ga0318551_1060959933300031896SoilAADPDASWIASQRDGDWIVVRIGVAPTKVIGTATKPPPVAPRDDPHSAIERAAWFAGGAG
Ga0318520_1002899233300031897SoilMTREEAIAEAKRRRASDSDASWIASSRDGEWTVVRVGVVSTKITGTATKPPPVAPRDDPHSPIERAVWFAGGGG
Ga0306923_1038398533300031910SoilMTREEAIAEAKRRRASDSDASWVASSRDGEWTVVRVGVVSTKITGTATKPPPVAPRDDPHSPIERAVWFAGGGG
Ga0306923_1067239413300031910SoilRAADPDASWIASQRDGDWIVVRIGVAPTKVIGTATKPPPVAPRDDPHSAIERAAWFAGGA
Ga0310916_1010154013300031942SoilDIEQRYPGAMTHDEAMAEVERRRTADPGASWIATERDGDWVVVRIGVAPTKVTGTATKPPPVAPQGDPHSAIERAAWFAGGGG
Ga0310916_1117907923300031942SoilTRDEALAEVERRRGTDPSASWIATQRDGDWIVVRVGIAPTKVTGTATKPPPVAPQDDPHSPIERATWFAGGGG
Ga0306926_1100762223300031954SoilMTRDEAMAEVERRRAADPSASWIATQRDGDWIVVRVGVTPTKVTGTATKPPPVAPQDDPHSPIERATWFAGGGG
Ga0306926_1124040713300031954SoilMTREEAIAEAKRRRASDSVASWIASSRDGEWTVVRVGVVSTKITGTATKPPPVAPRDDPHSPIERAVWFAGGGG
Ga0318562_1077881113300032008SoilVARHGHLVSGAPWGYPELMTREEALAEVERRRAADPSSSWIASQRDGAWGVVRIGVAPIEVTGTATKPPPAVPQGDPHSAIERATWFAGGGG
Ga0318569_1061758023300032010SoilMTHQEAIAEVERRRAADPGASWIASRRDGDWMVVRIGVAPTKVIGTATKPPPVAPREDPHSAIERAAWFAGGMS
Ga0318540_1057153913300032094SoilMTREEAIAEAKRRRAADPGASWIASERGGDWVVVRICVAPTKVTGTATKPPPVAPRDDPHSASERAAWFAGGGG
Ga0311301_1002448843300032160Peatlands SoilMTYEEAIAEVERRRVSDPDAAWVATRRRGEWAVARIALAPIMASGTATKPPPAAPRDDPHSPIERAAWFAAGG
Ga0311301_1006143143300032160Peatlands SoilMTREEAIAEAKRRQASDPDASWIATSLDGAWTVVRIDVAPTKSTGTATKPPPVAPRDDPHSPIERATWFAAGGG
Ga0335078_1049879223300032805SoilMTRDQAITEAKRRQEADPEASWIATSRDGEWTVVRIGVAPTKPTGTATKPPPVAPRDDPHSSIERAAWFAGGGS
Ga0335078_1209141213300032805SoilMTREEAIAEAKRKQASDPGASWIATSRDGEWTVVRIGVAPIKSTGTATKPPPWIVAPRDDPHSPIERAAWFAGGGG
Ga0335078_1269614913300032805SoilKPMTREEAIAEARRRQVSDPDASWIATSREGEWAVVRVGVVSTRPTGTATKPPPVAPRDDPHSPIERAAWFAGGGG
Ga0335081_1027702223300032892SoilMTREEAIAGVERRRASDPDGTWIATQRGDEWMIARIALAPTKVTGTATKPPPAAPRDDPHSAIERAAWFAAGG
Ga0335081_1130320613300032892SoilMTRDEAIAEAKRKQASDPSATWIATQRDGEWAVARVGVAPVKPTGTATKPPPEAPRDDPHSAAQRAAWFAGGGG
Ga0335074_1024455143300032895SoilMRAADPDASWIARERDGGWVVVRIGVPPTKVTGTATKPPPVAPQGDPHSAIERAAWFTGGLG
Ga0335074_1029391723300032895SoilMNRDEAMAEVERMRAADPDASWIARERDGGWVVVRIGVPPTKVTGTATKPPPVAPQGDPHSAVERAAWFTGGGG
Ga0335075_1053147623300032896SoilMNRDEAMAEVERMRAADPDASWIARERDGGWVVVRIGVPPTKVTGTATKPPPVAPQGDPHSAIERAAWFTGGLG
Ga0335083_1080054423300032954SoilMAEVERQRAADPSASWIARERDGGWVVVRIGVAPTQVTGTATKPPPVAPQGDPHSAIERAAWFTGGLG
Ga0335076_10000058263300032955SoilMTRDQAITEAKRRQEADPEASWIATSRDGEWAVVRIGIAPTKPTGTATKPPPVAPRDDPHSAIERAAWFAGGGS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.