Metagenome / Metatranscriptome Family F055158

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055158
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	68 residues
Representative Sequence	PLVADTPAAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYEEKAELSSLLKSKGRSRAPS
Number of Associated Samples	132
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.44 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	92.81 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.856 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.266 % of family members)
Environment Ontology (ENVO)	Unclassified (23.741 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.468 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.91% β-sheet: 0.00% Coil/Unstructured: 51.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF03979	Sigma70_r1_1	66.19
PF04546	Sigma70_ner	25.18
PF08278	DnaG_DnaB_bind	1.44
PF13302	Acetyltransf_3	1.44
PF03729	DUF308	0.72
PF12697	Abhydrolase_6	0.72
PF02566	OsmC	0.72
PF05199	GMC_oxred_C	0.72
PF00005	ABC_tran	0.72
PF05957	DUF883	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	91.37
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	1.44
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.72
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.72
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.72
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.72
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.86 %
Unclassified	root	N/A	20.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.86 %
Unclassified	root	N/A	20.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.86 %
Unclassified	root	N/A	20.14 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	74.82 %
Unclassified	root	N/A	20.14 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.72 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	30.22 %
Unclassified	root	N/A	20.14 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	26.62 %
Unclassified	root	N/A	20.14 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.72 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.72 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.72 %
candidate division KSB1	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	26.62 %
Unclassified	root	N/A	20.14 %
unclassified candidate division KSB1	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1	0.72 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.72 %
Halomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae	0.72 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	26.62 %
Unclassified	root	N/A	20.14 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.72 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.72 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	0.72 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	26.62 %
Unclassified	root	N/A	20.14 %
Halomonas aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas aestuarii	0.72 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.72 %
Vibrio cholerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	0.72 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10070004	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300001098\|JGI12633J13313_105802	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300001151\|JGI12713J13577_1015616	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300001546\|JGI12659J15293_10030406	All Organisms → cellular organisms → Bacteria → Proteobacteria	1332	Open in IMG/M
3300001593\|JGI12635J15846_10253849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1126	Open in IMG/M
3300001593\|JGI12635J15846_10641424	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300001661\|JGI12053J15887_10188695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1056	Open in IMG/M
3300002245\|JGIcombinedJ26739_100480659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1119	Open in IMG/M
3300003224\|JGI26344J46810_1019126	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300003505\|JGIcombinedJ51221_10285267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	672	Open in IMG/M
3300004152\|Ga0062386_101653923	Not Available	534	Open in IMG/M
3300005165\|Ga0066869_10088171	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300005591\|Ga0070761_10592994	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300005602\|Ga0070762_10943610	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300005950\|Ga0066787_10171348	Not Available	502	Open in IMG/M
3300005952\|Ga0080026_10184554	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300005993\|Ga0080027_10478138	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300006050\|Ga0075028_100989449	Not Available	523	Open in IMG/M
3300006172\|Ga0075018_10510520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	628	Open in IMG/M
3300009635\|Ga0116117_1084533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	789	Open in IMG/M
3300009635\|Ga0116117_1101618	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300009638\|Ga0116113_1151084	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300009660\|Ga0105854_1284596	Not Available	573	Open in IMG/M
3300009662\|Ga0105856_1242464	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300009665\|Ga0116135_1278705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	656	Open in IMG/M
3300009764\|Ga0116134_1154296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	809	Open in IMG/M
3300009824\|Ga0116219_10609118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	600	Open in IMG/M
3300010379\|Ga0136449_102148791	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300010869\|Ga0126359_1160310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	814	Open in IMG/M
3300011120\|Ga0150983_10638745	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300011269\|Ga0137392_10293174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1344	Open in IMG/M
3300012683\|Ga0137398_10197019	All Organisms → cellular organisms → Bacteria → Proteobacteria	1327	Open in IMG/M
3300012924\|Ga0137413_10950966	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300012929\|Ga0137404_11817980	Not Available	567	Open in IMG/M
3300012930\|Ga0137407_11258810	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300012944\|Ga0137410_10619441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	896	Open in IMG/M
3300014493\|Ga0182016_10845725	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300014495\|Ga0182015_10987700	Not Available	523	Open in IMG/M
3300014657\|Ga0181522_10709065	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	614	Open in IMG/M
3300015206\|Ga0167644_1019430	All Organisms → cellular organisms → Bacteria	3030	Open in IMG/M
3300017940\|Ga0187853_10066796	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300017946\|Ga0187879_10539795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	647	Open in IMG/M
3300017948\|Ga0187847_10783933	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300018013\|Ga0187873_1105946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1108	Open in IMG/M
3300018030\|Ga0187869_10550579	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300018085\|Ga0187772_10350580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1020	Open in IMG/M
3300019082\|Ga0187852_1422651	Not Available	518	Open in IMG/M
3300019999\|Ga0193718_1105298	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300020580\|Ga0210403_10244984	All Organisms → cellular organisms → Bacteria → Proteobacteria	1470	Open in IMG/M
3300020581\|Ga0210399_10353728	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300020583\|Ga0210401_10811579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	795	Open in IMG/M
3300021401\|Ga0210393_10491608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1002	Open in IMG/M
3300021402\|Ga0210385_10233286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1347	Open in IMG/M
3300021403\|Ga0210397_11307848	Not Available	563	Open in IMG/M
3300021406\|Ga0210386_10101301	Not Available	2361	Open in IMG/M
3300021433\|Ga0210391_10919804	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300021474\|Ga0210390_10936718	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300021474\|Ga0210390_11284961	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300021475\|Ga0210392_10966493	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300021478\|Ga0210402_11851367	Not Available	529	Open in IMG/M
3300021479\|Ga0210410_10306261	All Organisms → cellular organisms → Bacteria → Proteobacteria	1425	Open in IMG/M
3300021559\|Ga0210409_11497879	Not Available	551	Open in IMG/M
3300022523\|Ga0242663_1005734	All Organisms → cellular organisms → Bacteria → Proteobacteria	1510	Open in IMG/M
3300022526\|Ga0224533_1060171	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300022708\|Ga0242670_1026626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	725	Open in IMG/M
3300022717\|Ga0242661_1151856	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300022720\|Ga0242672_1009432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1146	Open in IMG/M
3300022722\|Ga0242657_1140951	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300024283\|Ga0247670_1104326	Not Available	524	Open in IMG/M
3300025359\|Ga0208322_1029318	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300025474\|Ga0208479_1058950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	747	Open in IMG/M
3300025604\|Ga0207930_1039887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1216	Open in IMG/M
3300026217\|Ga0209871_1080572	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300026304\|Ga0209240_1232928	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300026320\|Ga0209131_1148194	All Organisms → cellular organisms → Bacteria → Proteobacteria	1189	Open in IMG/M
3300026358\|Ga0257166_1035764	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300026551\|Ga0209648_10606958	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300026887\|Ga0207805_1020729	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300027045\|Ga0207726_1037104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	678	Open in IMG/M
3300027288\|Ga0208525_1036497	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300027330\|Ga0207777_1082315	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300027432\|Ga0209421_1031448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1038	Open in IMG/M
3300027567\|Ga0209115_1132296	Not Available	562	Open in IMG/M
3300027574\|Ga0208982_1001175	All Organisms → cellular organisms → Bacteria → Proteobacteria	5053	Open in IMG/M
3300027587\|Ga0209220_1005257	All Organisms → cellular organisms → Bacteria → Proteobacteria	3464	Open in IMG/M
3300027651\|Ga0209217_1032209	All Organisms → cellular organisms → Bacteria → Proteobacteria	1637	Open in IMG/M
3300027660\|Ga0209736_1111584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	739	Open in IMG/M
3300027663\|Ga0208990_1121902	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300027676\|Ga0209333_1025148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	1678	Open in IMG/M
3300027698\|Ga0209446_1188348	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300027729\|Ga0209248_10045098	Not Available	1358	Open in IMG/M
3300027737\|Ga0209038_10098038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	885	Open in IMG/M
3300027738\|Ga0208989_10018038	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300027853\|Ga0209274_10513942	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300027884\|Ga0209275_10827717	Not Available	534	Open in IMG/M
3300027911\|Ga0209698_11069510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	599	Open in IMG/M
3300028017\|Ga0265356_1005948	All Organisms → cellular organisms → Bacteria → Proteobacteria	1439	Open in IMG/M
3300028020\|Ga0265351_1011344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	745	Open in IMG/M
3300028036\|Ga0265355_1003318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1177	Open in IMG/M
3300028762\|Ga0302202_10464367	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300028773\|Ga0302234_10483950	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300028783\|Ga0302279_10025080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4280	Open in IMG/M
3300028866\|Ga0302278_10431877	Not Available	576	Open in IMG/M
3300029907\|Ga0311329_10963637	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300029911\|Ga0311361_10089385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	4475	Open in IMG/M
3300029913\|Ga0311362_10143855	All Organisms → cellular organisms → Bacteria → Proteobacteria	2935	Open in IMG/M
3300029913\|Ga0311362_10323984	All Organisms → cellular organisms → Bacteria → Proteobacteria	1582	Open in IMG/M
3300029914\|Ga0311359_10026200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6836	Open in IMG/M
3300029915\|Ga0311358_11052937	Not Available	554	Open in IMG/M
3300029939\|Ga0311328_10449394	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300029939\|Ga0311328_11112789	Not Available	509	Open in IMG/M
3300029943\|Ga0311340_10109910	All Organisms → cellular organisms → Bacteria	3005	Open in IMG/M
3300029952\|Ga0311346_11327144	Not Available	550	Open in IMG/M
3300029953\|Ga0311343_11211570	Not Available	575	Open in IMG/M
3300029992\|Ga0302276_10447732	Not Available	522	Open in IMG/M
3300030007\|Ga0311338_10789297	All Organisms → cellular organisms → Bacteria → Proteobacteria	948	Open in IMG/M
3300030007\|Ga0311338_11922405	Not Available	528	Open in IMG/M
3300030041\|Ga0302274_10470812	Not Available	546	Open in IMG/M
3300030056\|Ga0302181_10076862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas aestuarii	1692	Open in IMG/M
3300030509\|Ga0302183_10358586	Not Available	561	Open in IMG/M
3300030528\|Ga0210277_10523244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	621	Open in IMG/M
3300030617\|Ga0311356_11151626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	716	Open in IMG/M
3300030688\|Ga0311345_11251008	Not Available	536	Open in IMG/M
3300030738\|Ga0265462_12633958	Not Available	504	Open in IMG/M
3300030760\|Ga0265762_1118333	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300030813\|Ga0265750_1046323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	646	Open in IMG/M
3300030834\|Ga0265738_103243	Not Available	646	Open in IMG/M
3300030889\|Ga0265761_104983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	686	Open in IMG/M
3300030937\|Ga0138302_1339676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	849	Open in IMG/M
3300031057\|Ga0170834_110092794	All Organisms → cellular organisms → Bacteria → Proteobacteria	1255	Open in IMG/M
3300031232\|Ga0302323_102105662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	642	Open in IMG/M
3300031234\|Ga0302325_11211688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1003	Open in IMG/M
3300031247\|Ga0265340_10518381	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300031446\|Ga0170820_16523115	Not Available	526	Open in IMG/M
3300032515\|Ga0348332_10856860	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300032515\|Ga0348332_14669718	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300033405\|Ga0326727_10598981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	918	Open in IMG/M
3300033547\|Ga0316212_1025850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	823	Open in IMG/M
3300033825\|Ga0334843_031592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	721	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.12%
Host-Associated	Host-Associated	2.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.01%
Aquatic	Environmental → Aquatic	15.11%
Plants	Host-Associated → Plants	2.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.43%
Peat	Environmental → Terrestrial → Peat	20.14%
Freshwater	Environmental → Aquatic → Freshwater	12.95%
Sediment	Environmental → Aquatic → Sediment	2.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.16%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.44%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.14%
Loam	Environmental → Terrestrial → Soil → Loam	17.99%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.16%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.16%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.44%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.95%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	11.51%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.32%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.60%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.16%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.44%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.44%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.44%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.72%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001098	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1	Environmental	Open in IMG/M
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003224	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022526	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 10-14	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025359	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030834	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030889	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M
3300033825	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100700042	3300000567	Peatlands Soil	DPMVAELPGAAKELQMAIEKLLEECGPGRRMDELLRKAEELGLNYDEKTELSSLLKAKGRPRAPT*
JGI12633J13313_1058022	3300001098	Forest Soil	SAAAAKELTMAVEKLLEEYGPGRRMDELLKKAEELGLNYAEKAELSSLLKSKGRSRAPS*
JGI12713J13577_10156162	3300001151	Forest Soil	LVADSAAAAKELTMAVEKLLEEYGPGRRMDELLKKAEELGLNYAEKAELSSLLKSKGRSRAPS*
JGI12659J15293_100304061	3300001546	Forest Soil	DPLVADSAAAAKELTMAVEKLLEEYGPGRRMDELLKKAEELGLNYAEKAELSSLLKSKGRSRAPS*
JGI12635J15846_102538491	3300001593	Forest Soil	ADAEAAGQELRMAVKKLLEEHGPGRRMDELLQKAEDLGLNTLEQAELKELLKAKGTPKSGP*
JGI12635J15846_106414241	3300001593	Forest Soil	EFGRLTALATLDPLVASPEAAANELKMAVEKLQEAYGPGRRMDELLKKADELGLNYDEKAELTGLLKSKGRSRSPS*
JGI12053J15887_101886951	3300001661	Forest Soil	EPLVAESESAAKELRMAVEKLLEEYGPGRRMDELLRKAEELGLNYDEKAELTLLLKSKGRP*
JGIcombinedJ26739_1004806592	3300002245	Forest Soil	MAEPLVADPEAAAKELQMAVEKLLQEFGPGRRTDELLRKAEEMGLNFDEKTELSLLLKSKGRFRAPP*
JGI26344J46810_10191262	3300003224	Bog Forest Soil	DRAEYGRLADLAMLDPLVASPEAAAKELKMAVERLLEEYGPGRRMDELLKKAGELGLNYEEKAELSVLLKSKGRRRSPP*
JGIcombinedJ51221_102852672	3300003505	Forest Soil	PLVADSAAAAKELTMAVEKLLEEYGPGRRMDELLKKAEELGLNYAEKAELSSLLKSKGRSRAPS*
Ga0062386_1016539232	3300004152	Bog Forest Soil	LAMAQPMVAEAQGAAKELQMAVEKLLEAYGPGHRMDELLRKAEELGLNFDEKTELSLLLKAKGSPRAPG*
Ga0066869_100881712	3300005165	Soil	LVPTAEAAAKELQMALQKLVQEYGPGRRMDELLRKAEEMGLNYDEKAELSLLLQAKGRSRAPS*
Ga0070761_105929942	3300005591	Soil	RPEHERLTTLAMQDPLVADTAAAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYAEKAELSSLLKSKGRFRAPS*
Ga0070762_109436101	3300005602	Soil	ASGMVDTAGAAAQELQMAVRKLKESVGPGRRMDELLRKSNEMGLNYDEKAELSSLLKAKSHPGGST*
Ga0066787_101713481	3300005950	Soil	EHERLTTLAMQDPLVADSAAAAKELKMAVEKLLEEYGTGRRMDELLKKAEELGLNYDEKAELSSLLKSKGRSRAPS*
Ga0080026_101845541	3300005952	Permafrost Soil	ELAMQDPLVADTPSAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYDEKAELSSLLKSKGRSRAPS*
Ga0080027_104781381	3300005993	Prmafrost Soil	AEPLVADPEAAAKELQMAVEKLLQEYGPGRRTDELLRKAEEMGLNYDEKTELSLLLKSKGRFRAPP*
Ga0075028_1009894492	3300006050	Watersheds	PEAAGRELKMAVQKLVETLGPGARMDELLQKAQNLGLNYDEKAELTLLLKSRGQSDPKP*
Ga0075018_105105202	3300006172	Watersheds	ALVADSAAAAQELQMAVAKLLQEHGPGRRTDELLRKAEDMGLNFDEKAELSRLLQSKGRHRPAT*
Ga0116117_10845331	3300009635	Peatland	ELALAPAMVEEAAGAVKELQMAVHKLVEHHGPGRRMNELLRKAEDMGLNYDEKAELSLLLKSKARPGDPPSSAGA*
Ga0116117_11016181	3300009635	Peatland	EPLVADATTAASELQMAVHKLLEEFGPGRRMNELLQKAEEMGLNLDEKAELSNLLRTKTRPGGLA*
Ga0116113_11510842	3300009638	Peatland	LAALAAAEPLVADAGAAAQELQMAVQKLIEEHGPGRRMDELLRKAEELGLNYDEKTELSLLLKAKGRPRAPN*
Ga0105854_12845961	3300009660	Permafrost Soil	TLDPLVADTPAAASELKMAVEKLLVEYGPGRRMDELLKKAQELGLNYDEKAELSSLLQSKGRSRAPS*
Ga0105856_12424642	3300009662	Permafrost Soil	SELAMAEPLVPEAEAAAKELQMAVEKLLEEYGPGRRTDELLRKAEETGLNYDEKAELSLLLKSKGRPKAAS*
Ga0116135_12787052	3300009665	Peatland	YGRLAELAAAAGMVDTGAAAAAELQMALEKLTESVGPGRRVDELLRKAEEMGLNYDEKAELSSLLKAKAHPGGGA*
Ga0116134_11542962	3300009764	Peatland	GAAKELQMAVEKLLEECGPGRRMDELLRKAEELGLNYDEKAELSSLLKAKGRPRAPT*
Ga0116219_106091182	3300009824	Peatlands Soil	AEPLVADAAGAAEELQMAVTRLLEAYGPGRRMDELLRKAEEMGLNFDEKTELSLLLKTKVRPKAPS*
Ga0136449_1021487911	3300010379	Peatlands Soil	PMVVEAQGAAKELHMAIEKLLEAHGPGRRMDELLRKAEEQGLNYEEKTELSLLLKTKVRPGEPS*
Ga0126359_11603101	3300010869	Boreal Forest Soil	ELAMAEPLVADPESAAKELQMAVEKLLAEYGPGRRMDDLLRKAEELGLNYEEKAELSLLLKSKGRS*
Ga0150983_106387451	3300011120	Forest Soil	ERLTELAMQDPLVADSAAAAKELKMAVEKLLQEYGPGRRMDELLKKAEELGLNYDEKAELSSLLKTKGRSRAPS*
Ga0137392_102931741	3300011269	Vadose Zone Soil	MLSAFPFASPTIASVQDPLVADTAAAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYEEKAELSSLLKSKGRSRAP
Ga0137398_101970191	3300012683	Vadose Zone Soil	EYERLSELATCDPLVADTASAAEELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYDEKAELSSLLKSKGRFRAPS*
Ga0137413_109509661	3300012924	Vadose Zone Soil	EPMVAEAQGAAKELQMAVEKLLEEYGPGRRMDELLRKAEDLGLNFDEKTELSLLLKAKGRPRAPT*
Ga0137404_118179801	3300012929	Vadose Zone Soil	LATLDPLVADTASAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYQEKAELSSLLKSKGRSRAPS*
Ga0137407_112588101	3300012930	Vadose Zone Soil	TASAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYDEKAELSSLLQSKGRFRAPS*
Ga0137410_106194411	3300012944	Vadose Zone Soil	AEYGRLSELAISEPMVTDAQGAAQELLMAVERLLEEYGPGRRMDELLRKVEELGLNYDEKTELSMLLKAKGRFRALT*
Ga0182016_108457252	3300014493	Bog	HRLTELALAPAMVEEAAGAVKELQMAIHKLVEHHGPGRRMNELLRKAEDMGLNYDEKAELSLLLKSKARPGGPPSSAGG*
Ga0182015_109877001	3300014495	Palsa	AMAEPLVAEAEAAAEELLMAIEKLLQEYGPGRRTDELLRKAEETGLNYDEKAELSLLLKSKDRPKAAP*
Ga0181522_107090652	3300014657	Bog	VGDHEQLPAIGAGGLFAELATAPAMVGASGAATQELQMAIQKLKESLGPRRRVDELLRKAEEVGLNYDEKAELSSLLKAKGQPRGGA*
Ga0167644_10194303	3300015206	Glacier Forefield Soil	LAMAAPMVAEAQAAAEELQMAVEKLLEEYGPGRRMDELLRKAEELGLNFDEKTELSLLLQAKGRPRAPS*
Ga0187853_100667961	3300017940	Peatland	LAQLATTEPLVADAAAAGSELQMAVHKLLEEFGPGRRMNELLRKAEELGLNMNEKAELTSLLRTKRRPGGVT
Ga0187879_105397951	3300017946	Peatland	SELAMAEPLVADAAGAASELQMAVSKLLEAYGPGRRMDELLRKAEEIGLNFDEKAELSRLLRMKDRPRAPS
Ga0187847_107839332	3300017948	Peatland	LASTEPLVADAGAAANELQMAVHKLLEEFGPGRRMNELLRKAEEMGLNMDEKAELSHLLRSKHRPGGAA
Ga0187873_11059462	3300018013	Peatland	VADAAAAGSELQMAVHKLLEEFGPGRRMNELLRKAEELGLNMNEKAELTSLLRTKRRPGGVT
Ga0187869_105505791	3300018030	Peatland	ELALAPAMVEEAAGAVKELQMAVHKLVEHHGPGRRMNELLRKAEDMGLNSDEKTELSLLLKSKARPGDPPSSTGA
Ga0187772_103505802	3300018085	Tropical Peatland	VEYARLTELALASAMVVEESAAIKELQMAVQKLLETHGPGRRVNDLLRKAGEMGLNFEEKAELSVLLKSKGRPGGPP
Ga0187852_14226511	3300019082	Peatland	TTEPLVADAAAAGSELQMAVHKLLEEFGPGRRMNELLRKAEELGLNMNEKAELTSLLRTKRRPGGVT
Ga0193718_11052982	3300019999	Soil	PLVADTAAAAKELRMAVEKLLQEYGPGRRMDELLKKAEELGLNYDEKAELTSLLKSKGSPRAPS
Ga0210403_102449841	3300020580	Soil	AAKELQMAVAKLLEEYGPGRRMDDLLRKAEELGLNYEEKAELSLLLKSKGRSRATP
Ga0210399_103537282	3300020581	Soil	LAALATLDPLVASPEAAAKELKMAVEKLQEAYGPGRRMDELLKKAGELGLNYDEKAELTGLLKSKGRSRSPP
Ga0210401_108115792	3300020583	Soil	PLVAAPEAAAKELQMAVEKLLEEYGPGRRTDELLRKAEEMGLNYDEKAELSILLKSKGRS
Ga0210393_104916082	3300021401	Soil	EYGRLTDLSMQDPLVASSEAAAKELKMAVERLLEEYGPGRRMDELLKKAGELGLNYEEKAELSVLLKSKGRPRSPP
Ga0210385_102332862	3300021402	Soil	SSEAAAKELKMAVERLLEEYGPGRRMDELLKKAGELGLNYEEKAELSILLKSKGRPRSPP
Ga0210397_113078481	3300021403	Soil	AMAEPLVGSLEAASKELQMALHKLVQEYGPGRRMDELLRKAEEMGLNYDEKAELSLLLQAKGRSRAPS
Ga0210386_101013013	3300021406	Soil	RGMLDPLVADTAAAAKELKMAVEKLLHEYGPGRRMDELLKKAEELGLNYEEKAELSSLLKSKGRS
Ga0210391_109198042	3300021433	Soil	SMVGDVSGAAKELQMAIHKLVEHHGPGRRMNELLRKAEEMGLNYDEKTELSLLLKSKARPGDPPPSAGA
Ga0210390_109367182	3300021474	Soil	SMVEEASGAAKELQMAIHKLVEHHGPGRRMNELLRKAEEMGLNYDEKAELSTLLKSKARPGDPPQSAGT
Ga0210390_112849612	3300021474	Soil	VADAAAAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYDEKAELSSLLKTKGRSRAPS
Ga0210392_109664932	3300021475	Soil	TLAMQDPLVADTAAAAKELKMAVEKLLEEYGPGRRMDELLKKAGELGLNYEEKAELSSLLKSKGRSRAPS
Ga0210402_118513672	3300021478	Soil	EYARLSELAMAEPMVAEAQGAAKELQMAVEKLLEEYGPGRRMDELLRKAEELGLNFDEKTELSLLLKAKGRPRAPT
Ga0210410_103062611	3300021479	Soil	AEYGRLSALATLDPLVASPEAAAKELKMAVEKLQEAYGPGRRMDELLKKAGELGLNYDEKAELTGLLKSKGRSRSPP
Ga0210409_114978791	3300021559	Soil	YDRLAELAMAEPLVAAPEAAAKELQMAVEKLLEEYGPGRRMDELLRKAEEMGLNYEEKAELSLLLKSKGRS
Ga0242663_10057341	3300022523	Soil	TLAMQDPLVADTAAAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYDEKAELSSLLKSKGRSRAPS
Ga0224533_10601712	3300022526	Soil	AAAAGELQMAVQKLLEEHGPRRRMDELLRKAEDMGLNYDEKAELSLLLKSKSRPSPPS
Ga0242670_10266261	3300022708	Soil	AEPMVEAEAAAKELHMAVEKLLEEYGPGRRMDELLRKAEELGLNYDEKAELSLLLKSRGR
Ga0242661_11518562	3300022717	Soil	AEYGRLTDLAMLDPLVASSEAAAKELKMAVERLLEEYGPGRRMDELLKKAGELGLNYEEKAELSILLKSKGRPRSPP
Ga0242672_10094322	3300022720	Soil	VAAAKELKMAVEKLLQECGPGRRMDELLKKAEELGLNYDEKAELSSLLKSKGRFRAPS
Ga0242657_11409512	3300022722	Soil	AEPLVATPEAAAKELQMAVEKLVEECGPGRRMNELLRKAEETGLNYDEKAELSLLLKSKGRS
Ga0247670_11043262	3300024283	Soil	DRPEYGRLSELAMAEPMVAEAQGAAKELQMAVERLLEEYGPGRRMDELLRKAEELGLNFDEKAELSLLLKAKGRPRAPT
Ga0208322_10293182	3300025359	Peatland	LAELAMAEPLVADAAAAVPELQMAVAKLIEEYGPGRRTDELLRKAEEMGLNSDEKAELSRLLTSKGRLRAPPGST
Ga0208479_10589501	3300025474	Arctic Peat Soil	LAELASMEPLVADTAAAASELQMAVQKLLEEFGPGRRMNELLRKAEEMGLNMQEKAELSSLLRNKRRPGGTA
Ga0207930_10398872	3300025604	Arctic Peat Soil	YGRLAELAMAEPLVAEPESAAKELQMAVEKLLEEYGPGRRMDELLRKAEELGLNYEEKAELSLLLQSKGRSRAAP
Ga0209871_10805722	3300026217	Permafrost Soil	EYERLTELATLDPLVADTPSAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYDEKAELSSLLKSKGRSRAPS
Ga0209240_12329282	3300026304	Grasslands Soil	DTAAAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYEEKAELSSLLKSKGRSRAPS
Ga0209131_11481941	3300026320	Grasslands Soil	RLAELAMAEPLVAAPEAAAKELQMAVEKLLEEYGPGRRMDELLRKAEEMGLNYDEKAELSLLLKSKGRS
Ga0257166_10357642	3300026358	Soil	LPEYDRLAELAMAEPLVAAPEAAAKELQMAVEKLLEEYGPGRRMDELLRKAEEMGLNYDEKAELSLLLKSKGRS
Ga0209648_106069581	3300026551	Grasslands Soil	PLVADTPAAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYEEKAELSSLLKSKGRSRAPS
Ga0207805_10207292	3300026887	Tropical Forest Soil	VSDTPSAAKELAMAVEKLLMEYGPGRRMDELLRKAGELGLNYEEKAELSSLLKSKGRFRAPH
Ga0207726_10371041	3300027045	Tropical Forest Soil	PLVADTPSAAKELAMAVEKLLMEYGPGRRMDELLKKAEELGLNYEEKAELSTLLKSKGRFRAPH
Ga0208525_10364971	3300027288	Soil	LVPTAEAAAKELQMALQKLVQEYGPGRRMDELLRKAEEMGLNYDEKAELSLLLQAKGRSRAPS
Ga0207777_10823151	3300027330	Tropical Forest Soil	DPLVADTPSAAKELAMAVEKLLMEYGPGRRMDELLKKAEELGLNYDEKAELSELLKSKGRFRAPH
Ga0209421_10314481	3300027432	Forest Soil	AELASTEPLVADAAAAASELQMAVHKLLEEFGPGRRVNELLRKAEETGLNMEEKAELSTLLRNKRRPGGAA
Ga0209115_11322961	3300027567	Forest Soil	LAAAPGMVDTAAAAAQELQMALQKLKESVGPGRRVDELLRKAEEMGLNYDEKAELSSLLKAKANPGGGA
Ga0208982_10011751	3300027574	Forest Soil	AAAKELKMAVEKLLQEYGPGRRMDELLKKAEELGLNYDEKAELSSLLKSKGRFRAPS
Ga0209220_10052571	3300027587	Forest Soil	HDRLAELAMAEPLVGAPEAAAKELQMAVEKLLEEYGPGRRTDELLRKAEEMGLNYDEKAELSLLLKSRGRS
Ga0209217_10322091	3300027651	Forest Soil	AMAEPLVGAPEAAAKELQMAVEKLLEEYGPGRRTDELLRKAEEMGLNYDEKAELSLLLKSKGRS
Ga0209736_11115842	3300027660	Forest Soil	SEYQRLTELATLDPLVADTASAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYEEKAELSSLLKSKGRSRAPT
Ga0208990_11219022	3300027663	Forest Soil	DRLAELAMAEPLVAAPEAAAKELQMAIEKLLEEYGPGRRTDELLRKAEEMGLNYDEKAELSLLLKSRGRS
Ga0209333_10251481	3300027676	Forest Soil	PLVADAEAAGQELRMAVKKLLEEHGPGRRMDELLQKAEDLGLNTLEQAELKELLKAKGTPKSGP
Ga0209446_11883481	3300027698	Bog Forest Soil	MPVVADPQAAASELQMAIEKILEAHGPGQRVDELLRKAEDQGLNFDEKTELSTLLRAKGKGSRP
Ga0209248_100450981	3300027729	Bog Forest Soil	MVVDAEGASKELQMAVKKLLEAYGPGRRMNDLLRKSEEIGLNFDEKAELSLLLKSKERPGAPS
Ga0209038_100980382	3300027737	Bog Forest Soil	FERLAELATVAPLVADEPGAAKELKMAVEKLLEEFGPGRRMDELLKKAEEMGLNYDEKAELSLLLKSKGRSRGAP
Ga0208989_100180382	3300027738	Forest Soil	RDLPEYGRLAELAMAEPLVAEPQAAAKELQMAVEKLLEEYGPGRRMDELLRKAEELGLNYDEKAELSILLKSRGRSS
Ga0209274_105139421	3300027853	Soil	ELAMAEPMVAEEGGAAKELKMAVERLLEAYGPGRRMDELLRKAEEMGLNYDEKAELSLLLKTKVRPKASS
Ga0209275_108277171	3300027884	Soil	LVADASAAASELQMAIEKIVEAHGPGQRVNELLRKAEEQGLNIDEKTELSTLLRAKTKVAKPP
Ga0209698_110695102	3300027911	Watersheds	AAAKELQMAIEKLIEEHGPGRRMNELLRKAQELGLNYDEKAELSLLLQAKGRPRVPP
Ga0265356_10059481	3300028017	Rhizosphere	DPLVADTAAAAKELKMAVEKLLHEYGPGRRMDELLKKAEELGLNYEEKAELSSLLKSKGRSRAPT
Ga0265351_10113441	3300028020	Soil	ELAMAEPLVAEPESAAKELQMAVAKLLEEYGPGRRMDDLLRKAEELGLNYEEKAELSLLLKSKGRSRATP
Ga0265355_10033181	3300028036	Rhizosphere	RERPEHERLTTLAMQDPLVADSGAAAKELTMAVEKLLEEYGPGRRMDELLKKAEELGLNYAEKAELSSLLKSKGRSRAPS
Ga0302202_104643672	3300028762	Bog	PLVADAPAAAQELQMAVEKLLQEFGPGRRMDELLRKAEEMGLNYDEKAELSLLLKSKGRSRAPS
Ga0302234_104839501	3300028773	Palsa	LAELAMLDPLVADIPSAAKELSMAVERLVVDYGPGRRMDELLRKAGDLGLNYDEKAELSHLLKSKGRPRGSS
Ga0302279_100250801	3300028783	Bog	YNRLCELAMAAPIVAEEGGAAKELQMAIRKLLESHGPGRRVNELLRKAEEMGLNFDEKAELSLLLKAKSRPGGTS
Ga0302278_104318772	3300028866	Bog	RLSELAMVEPLVADAPAAAQELQMAVEKLLQEFGPGRRMDELLRKAEEMGLNYDEKAELSLLLKSKGRSRAPS
Ga0311329_109636371	3300029907	Bog	AEHGRLSELAMVEPLVADAPAAAQELQMAVEKLLQEFGPGRRMDELLRKAEEMGLNYDEKTELSLLLKSKGRS
Ga0311361_100893852	3300029911	Bog	MAEPLVASAEAAAKELQMAVEKLIEEYGPGRRMDELLRKARELGLNYDEKAELSLLLKSKGRSRSVH
Ga0311362_101438554	3300029913	Bog	ELAMAEPLVADAAAAAQELRMAVKKLLEEHGPGRRMDELLHKAEDLGLNSSEKAELSELLKAKGTPKGGL
Ga0311362_103239842	3300029913	Bog	AAAPELRMAVEKLLEEHGPGRRMDELLQKAEDLGLNTLEKAELSELLKAKGTPKAGP
Ga0311359_100262001	3300029914	Bog	RPEFARLAELAATEPLVASPAAAAGELQMAVQKLLEEHGPRRRMDELLRKAEDMGLNYDEKAELSLLLKSKSRPSPPS
Ga0311358_110529371	3300029915	Bog	LAMAEPLVASAEAAAKELQMAVEKLIEEYGPGRRMDELLRKARELGLNYDEKAELSLLLKSKGRSRSVH
Ga0311328_104493941	3300029939	Bog	RTEYGRLSALAISAPLVADSQGAAKELQMAVEKLIDEYGPGRRMDELLRKAEELGLNNDEKAELSLLLQAKGRPRAPN
Ga0311328_111127891	3300029939	Bog	SAEAAAKELQMAVEKLIEEYGPGRRMDELLRKARELGLNYDEKAELSLLLKSKGRSRSVH
Ga0311340_101099104	3300029943	Palsa	EGGAAKELKMAIERLLEAYGPGRRMDELLRKAEEMGLNYDEKAELSLLLKTKVRPKASS
Ga0311346_113271442	3300029952	Bog	AEPLVADAAAAAPELRMAVEKLLEEHGPGRRMDELLQKAEDLGLNTLEKAELSELLKAKGTPKAGP
Ga0311343_112115702	3300029953	Bog	ELALAPAMVEEAAGAVKELQMAVHKLVEHHGPGRRMNELLRKAEDMGLNYDEKAELSLLLKSKARPGGPPSSAGA
Ga0302276_104477321	3300029992	Bog	EYNRLCELAMAAPIVAEEGGAAKELQMAIRKLLESHGPGRRVNELLRKAEEMGLDSAEKTELSELLRSKSRPGVPN
Ga0311338_107892972	3300030007	Palsa	QLAQAEPLVADAAGAAKELSMAVEKLLEESGPGRRMDELLRKAGEMGLNYDEKAELSSLLKDRGRTRPSN
Ga0311338_119224052	3300030007	Palsa	LAELATAPAMVGASGAATQELQMAIQKLKESLGPRRRVDELLRKAEEVGLNYDEKAELSSLLKAKTPPSGRL
Ga0302274_104708122	3300030041	Bog	LGELALSESMVTEEAGAAKELQMAVEKLLEEYGPARRMDELLRKAEELGLNYDEKTELSLLLKAKGRPRAPL
Ga0302181_100768622	3300030056	Palsa	ASGAAAQELQMAIEKLKDSIGPGRRVDELLRKAEEVGLNYDEKAELSSLLKAKTPPSGRL
Ga0302183_103585861	3300030509	Palsa	DPMVAEADAAAKELHMAVEKLLEEYGPGRRMDELLRKAEELGLNYDEKAELSQLLKSKGR
Ga0210277_105232442	3300030528	Soil	ADTAAAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYDEKAELSSLLKSKGRSRAP
Ga0311356_111516261	3300030617	Palsa	PSAAKELSMAVERLVVDYGPGRRMDELLRKAGDLGLNYDEKAELSHLLKSKGRPRGSS
Ga0311345_112510082	3300030688	Bog	PLVADAKAAASELQMAVHKLLEEHGPGRRMNELLRKAEEMGLDSAEKTELSELLRSKSRPGVPN
Ga0265462_126339582	3300030738	Soil	ADAPSAAKELQMAVEKLVEEHGPGRRMDELLRKAEEMGLNYDEKAELSLLLKSKGRSRAH
Ga0265762_11183331	3300030760	Soil	AEPMVAEEGGAAKELKMAVERLVEAYGPGRRMDELLRKAEEMGLNYDEKAELSLLLRTKVRPKASS
Ga0265750_10463231	3300030813	Soil	AEAAAKELHMAVEKLLEEYGPGRRMDELLRKAEELGLNYDEKAELSLLLKSRGRS
Ga0265738_1032431	3300030834	Soil	MHTLIIRIACPRDGDASLQDPLVADTAAAAKELKMAVEKLLREYGPGRRMDELLKKAEELGLNYEEKAELSSLLK
Ga0265761_1049832	3300030889	Soil	ADSGAAAKELTMAVEKLLEEYGPGRRMDELLKKAEELGLNYAEKAELSSLLKSKGRSRAP
Ga0138302_13396761	3300030937	Soil	SAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYAEKAELTSLLKSKGRSRAPS
Ga0170834_1100927941	3300031057	Forest Soil	ERLTELATLDPLVAETASAAKELKMAVEKLLEEYGPGRRMDELLKKAEELGLNYDEKAELSQLLKSKGRSRAPS
Ga0302323_1021056621	3300031232	Fen	RLAELAMGEPLVAEPEAAAKELRMAVAKLLNEYGPGRRMDELLRKAEEMGLNYDEKAELTLLLKSKGRPQPRP
Ga0302325_112116881	3300031234	Palsa	YGRLAELAMAEPLVAEPQGAAKELQMAVQKLIGEYGPGRRMDELLRKAEEIGLNYDEKAELSRLLKSKGRPAAAP
Ga0265340_105183811	3300031247	Rhizosphere	ELAMAEPLVAEPEAAAKELRMAVEKLLEEYGPGRRMDELLRKAEEMGLNYDEKAELSLLLKSKGRP
Ga0170820_165231151	3300031446	Forest Soil	AMAEPLVATPEAAAKELQMAVEKLVEECGPGRRMNELLRKAEETGLNYDEKAELSLLLQAKGRSRPPS
Ga0348332_108568601	3300032515	Plant Litter	DTPAAAQELQMAVEKLLEEYGPGRRMNELLRKAEELGLNYDEKAELSLLLQSRGRSSGTP
Ga0348332_146697182	3300032515	Plant Litter	AISAPMVAEAHGAAKELQMAVEKLIDEYGPGRRMDELLRKAEELGLNYDEKAELSLLLKSRGRS
Ga0326727_105989812	3300033405	Peat Soil	ELAVSQSMVVDEQAAAKELQMAVEKLIEECGPARRMDELLRKAEELGLNYDEKAELSSLLQSRGRPRAPL
Ga0316212_10258502	3300033547	Roots	DRPEHERLTTLAMQDPLVADSAAAAKELTMAVEKLLEEYGPGRRMDELLKKAEELGLNYAEKAELSSLLKSKGRSRAPS
Ga0334843_031592_15_203	3300033825	Soil	VADPEAAAKELRMAVEKLLDEYGPGRRMDELLRKAEETGLNYDEKAELSLLLKSKGRPQARS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055158

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences