Metagenome / Metatranscriptome Family F055152

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055152
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	73 residues
Representative Sequence	MKTPPNIVKFRLNGFPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGRMIDAWIAEAELPNKIVKFPALVRA
Number of Associated Samples	106
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.06 %
% of genes near scaffold ends (potentially truncated)	30.22 %
% of genes from short scaffolds (< 2000 bps)	87.77 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.396 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (20.863 % of family members)
Environment Ontology (ENVO)	Unclassified (27.338 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.63% β-sheet: 1.98% Coil/Unstructured: 61.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF13884	Peptidase_S74	3.60
PF01740	STAS	3.60
PF13290	CHB_HEX_C_1	0.72
PF01402	RHH_1	0.72
PF01594	AI-2E_transport	0.72
PF13287	Fn3_assoc	0.72
PF00196	GerE	0.72
PF03900	Porphobil_deamC	0.72
PF05960	DUF885	0.72
PF13833	EF-hand_8	0.72
PF03992	ABM	0.72
PF00589	Phage_integrase	0.72
PF06739	SBBP	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0181	Porphobilinogen deaminase	Coenzyme transport and metabolism [H]	0.72
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.72
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.40 %
Unclassified	root	N/A	44.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.40 %
Unclassified	root	N/A	44.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.40 %
Unclassified	root	N/A	44.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	33.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	33.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.60 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	24.46 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.72 %
Micropepsales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.60 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.46 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.72 %
Micropepsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.60 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.46 %
Rhizomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium	0.72 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.60 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.46 %
Rhizomicrobium electricum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → Rhizomicrobium electricum	0.72 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.60 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.46 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.72 %
Rhizomicrobium electricum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → Rhizomicrobium electricum	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16835027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1094	Open in IMG/M
2170459005\|F1BAP7Q01EBMPG	Not Available	545	Open in IMG/M
2228664021\|ICCgaii200_c0442167	Not Available	562	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100638724	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300000559\|F14TC_101976650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	931	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1002680	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2527	Open in IMG/M
3300000890\|JGI11643J12802_10864093	Not Available	592	Open in IMG/M
3300000890\|JGI11643J12802_11392884	Not Available	885	Open in IMG/M
3300000890\|JGI11643J12802_12227737	Not Available	562	Open in IMG/M
3300000956\|JGI10216J12902_101091964	Not Available	609	Open in IMG/M
3300000956\|JGI10216J12902_117230401	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300001431\|F14TB_104514190	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300004114\|Ga0062593_100192387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → Rhizomicrobium electricum	1613	Open in IMG/M
3300004114\|Ga0062593_101348191	Not Available	759	Open in IMG/M
3300004156\|Ga0062589_101060644	Not Available	763	Open in IMG/M
3300004157\|Ga0062590_101331263	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300004463\|Ga0063356_104768064	Not Available	583	Open in IMG/M
3300004643\|Ga0062591_101567835	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300004643\|Ga0062591_102703292	Not Available	525	Open in IMG/M
3300005166\|Ga0066674_10051377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1859	Open in IMG/M
3300005172\|Ga0066683_10531032	Not Available	718	Open in IMG/M
3300005175\|Ga0066673_10097835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1570	Open in IMG/M
3300005180\|Ga0066685_10600741	Not Available	757	Open in IMG/M
3300005186\|Ga0066676_10835238	Not Available	622	Open in IMG/M
3300005186\|Ga0066676_10917849	Not Available	587	Open in IMG/M
3300005187\|Ga0066675_10124263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1739	Open in IMG/M
3300005294\|Ga0065705_10907567	Not Available	574	Open in IMG/M
3300005295\|Ga0065707_10464757	Not Available	753	Open in IMG/M
3300005332\|Ga0066388_100150941	All Organisms → cellular organisms → Bacteria	2902	Open in IMG/M
3300005332\|Ga0066388_100397267	Not Available	2024	Open in IMG/M
3300005332\|Ga0066388_100465082	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300005332\|Ga0066388_101704086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1115	Open in IMG/M
3300005332\|Ga0066388_105746426	Not Available	627	Open in IMG/M
3300005338\|Ga0068868_101231055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	693	Open in IMG/M
3300005366\|Ga0070659_100486273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1051	Open in IMG/M
3300005434\|Ga0070709_10057421	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300005434\|Ga0070709_11322606	Not Available	582	Open in IMG/M
3300005435\|Ga0070714_101428471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	676	Open in IMG/M
3300005446\|Ga0066686_10617105	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005450\|Ga0066682_10095294	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300005468\|Ga0070707_101186983	Not Available	729	Open in IMG/M
3300005536\|Ga0070697_101266266	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005540\|Ga0066697_10044508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2502	Open in IMG/M
3300005554\|Ga0066661_10108342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1669	Open in IMG/M
3300005558\|Ga0066698_10099971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1912	Open in IMG/M
3300005569\|Ga0066705_10810963	Not Available	558	Open in IMG/M
3300005574\|Ga0066694_10468248	Not Available	589	Open in IMG/M
3300005587\|Ga0066654_10197313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1044	Open in IMG/M
3300005764\|Ga0066903_100510716	Not Available	2041	Open in IMG/M
3300005764\|Ga0066903_101643879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1220	Open in IMG/M
3300005937\|Ga0081455_10004621	All Organisms → cellular organisms → Bacteria	15370	Open in IMG/M
3300005937\|Ga0081455_10009791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9813	Open in IMG/M
3300005937\|Ga0081455_10010932	All Organisms → cellular organisms → Bacteria	9153	Open in IMG/M
3300005937\|Ga0081455_10015610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7369	Open in IMG/M
3300005937\|Ga0081455_10025511	All Organisms → cellular organisms → Bacteria	5454	Open in IMG/M
3300005937\|Ga0081455_10513814	Not Available	801	Open in IMG/M
3300005937\|Ga0081455_10939487	Not Available	537	Open in IMG/M
3300005983\|Ga0081540_1047647	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2153	Open in IMG/M
3300005983\|Ga0081540_1066965	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300006173\|Ga0070716_100023859	All Organisms → cellular organisms → Bacteria	3250	Open in IMG/M
3300006173\|Ga0070716_100111757	Not Available	1694	Open in IMG/M
3300006175\|Ga0070712_100406506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1125	Open in IMG/M
3300006755\|Ga0079222_11639112	Not Available	612	Open in IMG/M
3300006796\|Ga0066665_10123453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1933	Open in IMG/M
3300006796\|Ga0066665_10291851	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300006797\|Ga0066659_10754741	Not Available	800	Open in IMG/M
3300006844\|Ga0075428_100513150	Not Available	1282	Open in IMG/M
3300006852\|Ga0075433_10398050	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300006852\|Ga0075433_10703982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	885	Open in IMG/M
3300006871\|Ga0075434_100229975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1873	Open in IMG/M
3300006871\|Ga0075434_101412399	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300007076\|Ga0075435_101053653	Not Available	710	Open in IMG/M
3300009012\|Ga0066710_101858851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	905	Open in IMG/M
3300009094\|Ga0111539_12484601	Not Available	601	Open in IMG/M
3300009100\|Ga0075418_11678926	Not Available	690	Open in IMG/M
3300009137\|Ga0066709_100881309	Not Available	1303	Open in IMG/M
3300009162\|Ga0075423_11033725	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300009792\|Ga0126374_10820419	Not Available	713	Open in IMG/M
3300010043\|Ga0126380_10105942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1700	Open in IMG/M
3300010043\|Ga0126380_10800990	Not Available	771	Open in IMG/M
3300010043\|Ga0126380_11234640	Not Available	646	Open in IMG/M
3300010047\|Ga0126382_11506888	Not Available	619	Open in IMG/M
3300010301\|Ga0134070_10424136	Not Available	528	Open in IMG/M
3300010303\|Ga0134082_10236803	Not Available	754	Open in IMG/M
3300010320\|Ga0134109_10358867	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300010322\|Ga0134084_10060193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1139	Open in IMG/M
3300010326\|Ga0134065_10488773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	511	Open in IMG/M
3300010335\|Ga0134063_10227483	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300010335\|Ga0134063_10306343	Not Available	765	Open in IMG/M
3300010359\|Ga0126376_12269364	Not Available	588	Open in IMG/M
3300010361\|Ga0126378_12468398	Not Available	594	Open in IMG/M
3300010362\|Ga0126377_10735219	Not Available	1041	Open in IMG/M
3300010362\|Ga0126377_11557327	Not Available	735	Open in IMG/M
3300010362\|Ga0126377_12840092	Not Available	558	Open in IMG/M
3300010364\|Ga0134066_10022381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1416	Open in IMG/M
3300010366\|Ga0126379_12267261	Not Available	643	Open in IMG/M
3300010376\|Ga0126381_100247290	All Organisms → cellular organisms → Bacteria	2414	Open in IMG/M
3300010376\|Ga0126381_101836875	Not Available	874	Open in IMG/M
3300010398\|Ga0126383_12280138	Not Available	627	Open in IMG/M
3300012200\|Ga0137382_11078700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300012202\|Ga0137363_10084228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2376	Open in IMG/M
3300012208\|Ga0137376_10176102	Not Available	1846	Open in IMG/M
3300012285\|Ga0137370_10433586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	799	Open in IMG/M
3300012349\|Ga0137387_11236886	Not Available	526	Open in IMG/M
3300012354\|Ga0137366_10497985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	880	Open in IMG/M
3300012361\|Ga0137360_10559056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	977	Open in IMG/M
3300012930\|Ga0137407_10242879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1630	Open in IMG/M
3300012948\|Ga0126375_10354598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1042	Open in IMG/M
3300013297\|Ga0157378_10842688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	945	Open in IMG/M
3300013307\|Ga0157372_10800075	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300014157\|Ga0134078_10061391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1327	Open in IMG/M
3300015264\|Ga0137403_10361132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1338	Open in IMG/M
3300015357\|Ga0134072_10094175	Not Available	911	Open in IMG/M
3300015371\|Ga0132258_10133363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5927	Open in IMG/M
3300015374\|Ga0132255_103315011	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300018028\|Ga0184608_10308213	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300018431\|Ga0066655_10658589	Not Available	708	Open in IMG/M
3300018433\|Ga0066667_10510170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	992	Open in IMG/M
3300018433\|Ga0066667_11303307	Not Available	635	Open in IMG/M
3300018482\|Ga0066669_10343550	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300019356\|Ga0173481_10884997	Not Available	502	Open in IMG/M
3300021560\|Ga0126371_11895808	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300025271\|Ga0207666_1057479	Not Available	621	Open in IMG/M
3300025315\|Ga0207697_10508500	Not Available	532	Open in IMG/M
3300025915\|Ga0207693_11150953	Not Available	587	Open in IMG/M
3300025930\|Ga0207701_10002875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	17788	Open in IMG/M
3300026538\|Ga0209056_10239941	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300026538\|Ga0209056_10714741	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300026540\|Ga0209376_1081410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1721	Open in IMG/M
3300026550\|Ga0209474_10476743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	632	Open in IMG/M
3300030916\|Ga0075386_12217753	Not Available	767	Open in IMG/M
3300030966\|Ga0075383_11361842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	764	Open in IMG/M
3300031231\|Ga0170824_100017271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300031231\|Ga0170824_122699736	Not Available	975	Open in IMG/M
3300031469\|Ga0170819_13025058	Not Available	907	Open in IMG/M
3300031474\|Ga0170818_100347040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1190	Open in IMG/M
3300032180\|Ga0307471_101206702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	921	Open in IMG/M
3300032180\|Ga0307471_104010992	Not Available	520	Open in IMG/M
3300034090\|Ga0326723_0607966	Not Available	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.30%
Host-Associated	Host-Associated	18.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.58%
Plants	Host-Associated → Plants	18.70%
Aquatic	Environmental → Aquatic	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.63%
Sediment	Environmental → Aquatic → Sediment	0.72%
Peat	Environmental → Terrestrial → Peat	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.19%
Loam	Environmental → Terrestrial → Soil → Loam	13.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.04%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.47%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	6.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.16%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01596920	2088090014	Soil	MKNHMRTSPNVVKFRLAGFPLDALDQKRMRRLRRTSDLTGVPIPDLISEIVDQVIEIWLAEAELPNKIVPFPAVGR
E41_06765120	2170459005	Grass Soil	VKFRLNGVPLDALDQKRMRRLRRTSDRMGVPIPDLISEILGQMIDAWIAEAELPNKIVKFPASVRACGE
ICCgaii200_04421672	2228664021	Soil	MKNPPNIVKLRLNGFPLDALDQKRMRRLRRTSDRIGVPIPDLIREILGQIFDACIAEAELPN
INPhiseqgaiiFebDRAFT_1006387244	3300000364	Soil	MNGFALDALDQQQMRCLRRTSDETGVPIPNLISRALNQVIEAWMAEAELPRKIVKFPVAAQ*
F14TC_1019766501	3300000559	Soil	MKTPPNIVKFRLNGFPLDALDQKRMRRLRRTSDRMGVPIPDLILGILGQMIDVWIAEAELPNKIVKFPAAVRACGK*
AP72_2010_repI_A10DRAFT_10026802	3300000651	Forest Soil	MKKHMRTLPNVVKFRLAGFPVDALDQKRIRRLRRTSDRTGVPIPDLISEIVGHVIWLAEAELPNKIVKFPAAGRRALYFHGHKHRP*
JGI11643J12802_108640932	3300000890	Soil	MKTPPNIVKFRLNGFPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGRMIDAWIAEAELPNKIVKFPALVRA
JGI11643J12802_113928841	3300000890	Soil	MKPPPNIVKFRLNGFALDALDQKRMRRLRRTSDRMGVPIPDLISEILRKMIDVWIAEAELPNKIVRFPAAAR
JGI11643J12802_122277371	3300000890	Soil	MKGNVHMKNPPNLVKFRLNGVPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDAWIAEAELPNKIVKFPASVRACGE*
JGI10216J12902_1010919641	3300000956	Soil	MKKPPNLVKFRLNGVPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDAWIAEAELPNKIVKFPAAVRACGE*
JGI10216J12902_1172304013	3300000956	Soil	GKRDNERKKHMKIPPNVVKFRLAGFPIDALDQKRMRRLRKTSDRTGVPIPDLIRQILGQIIDAWIAEAELPNKIVKFPAAVR*
F14TB_1045141901	3300001431	Soil	VLQDRLLDGLMKPPRNIVKFRLDGFPLDALDQKRIRCLRITSDRSGVPIPELIRKVLDQTVDAWAAEAELPGKIVKFPASAAR*
Ga0062593_1001923872	3300004114	Soil	MKNPPNIVKLRLNGFPLDALDQKRMRRLRRTSDRIGVPIPDLIREILGQIFDACIAEAELPNKIVKFPARRAGSSSSIC*
Ga0062593_1013481911	3300004114	Soil	MKNPQNIVKLRLNGFPLDALDQKRMRLLRRTSERMGVPIPDLIREILGQVIDACIAEAELPNKIVKFPAAAR*
Ga0062589_1010606442	3300004156	Soil	MKTPPNIVKFRLNGFPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGRMIDAWIAEAELPNKIVKFPAAVNRPPKPRRRFGIP*
Ga0062590_1013312631	3300004157	Soil	MKGNVHMKKPPNLVKFRLNGVPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDAWIAEAELPNKIVKFP
Ga0063356_1047680641	3300004463	Arabidopsis Thaliana Rhizosphere	MRTPPNVVKFRLAGFPLDALDQKRMRCLRRTSDRTGVPIPDLISEIVGQVIKIWLAEAELPNKIVKFPADGR*
Ga0062591_1015678352	3300004643	Soil	VKFRLAGLPVDALDQKRMRRLRRTSDRTGVPIPDLISEIVGHVIEIWLAEAELPNKIVKFSAAGR*
Ga0062591_1027032921	3300004643	Soil	PNIVKFRLNGFALDALDQKRMRRLRRTSDRMGVPIPDLISEILRKMIDVWIAEAELPNKIVRFPAAAR*
Ga0066674_100513774	3300005166	Soil	MRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVTFPAAGR*
Ga0066683_105310321	3300005172	Soil	MRTPPNVVKFRRAGFPLDALDQKRVLRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVTFPAAGR*
Ga0066673_100978352	3300005175	Soil	MRPPQNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVTFPAAGR*
Ga0066685_106007412	3300005180	Soil	FPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPEFC*
Ga0066676_108352381	3300005186	Soil	KFRLNGFPLDALDQKRMRRLRRTSDQMGVPIPDLIWEIVGQMIDAWIAEAELPQKIVKFPVAGRSRG*
Ga0066676_109178492	3300005186	Soil	MKTPPNLVKFHLAGFPLDALDQKRMRRLRMTSDQLGVPIPDLIREILGEMIDAWIAEAELPNKIVKFPAAVRACAE*
Ga0066675_101242633	3300005187	Soil	MKTPPNIVKFRLAGFPLDALDQKRMRRLRRTSDQTGVPIPDLICEIVGQIIDAWMAEAELPNKIVKFPATAR*
Ga0065705_109075671	3300005294	Switchgrass Rhizosphere	MKPPPNIVKFRLNGFALDALDQKRMRRLRKTSDRMGVPIPDLIHEILRNMIVALIAEAELPNKIVKFPAAAR*
Ga0065707_104647571	3300005295	Switchgrass Rhizosphere	LNGFALDALDQKRMRRLRKTSDRMGVPIPDLIHEILRNMIVALIAEAELPNKIVKFPAAAR*
Ga0066388_1001509412	3300005332	Tropical Forest Soil	MEPPPNIVKFRLNGFALDALDQKRMRRLRKTSDRMGVPIPDLIHEILGQIIDACIAEAELPNKIVKFPAAAR*
Ga0066388_1003972672	3300005332	Tropical Forest Soil	MKPPPNIVKFRLNGFALDALDQKRMRRLRKTSDQMGVPIPDLIHEILRKMIDALIAEAELPNKIVKFPAAAR*
Ga0066388_1004650823	3300005332	Tropical Forest Soil	MRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLIREIVDQVIEIWLAEAELPNKIVPFPAVVQ*
Ga0066388_1017040863	3300005332	Tropical Forest Soil	MKPPPNIVKFRLNGFALDALDQKRMRRLRRTSDRMGVPIPDLISEILRKMIEVWIAEAELPNKIVKLPAAVRACGE*
Ga0066388_1057464261	3300005332	Tropical Forest Soil	MKTPPNILKFRPNGFPLDALDQKRMRHLRRTSDRIGVPIPDLLREILGQMIDACVAEAELPNKIVKFPARRAGSCSSIC
Ga0068868_1012310553	3300005338	Miscanthus Rhizosphere	MKNPQNIVKLRLNGFSLDALDQKQMHRLRRTSDRIGVPIPDLIREIIGQIIDVCIAEAELPNKI
Ga0070659_1004862735	3300005366	Corn Rhizosphere	MKNPQNIVKLRLNGISLDALDQKQMHRLRRTSDRIGVPIPDLSREIIGQIIDVCIAEAELPNKIVKFPARRAR*
Ga0070709_100574216	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKNPQNIVKLRLNGFPLDALDQKRMRRLRRTSERMGVPIPDLIREILGQTIDACIAEAELPNKIVKFPAAAR*
Ga0070709_113226061	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKTPPNIVKFRLNGFALDALDQKWMRRLRKTSDRMGVPIPDLIHEILRKMIVALIAEAELPNKIVKFPTAAR*
Ga0070714_1014284711	3300005435	Agricultural Soil	MKNPQNILKFRPDGFPLDALDQKGMRRLRRTSDRIGVPIPDLLRDILGQMIDACIAEAELPNKIVKFP
Ga0066686_106171051	3300005446	Soil	RMKAPPNIVKLRLDGFPLDALDQKRMRRLRRTSDQMGVPIPDLIWEIVGQMIDAWIAEAELPHKIVKFPVAGRSRG*
Ga0066682_100952942	3300005450	Soil	MRTPQNVVKFRLAGFPLDALDQKRMRRLRKTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVTFPAAGR*
Ga0070707_1011869831	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKPPPNIVKFRLNGFALDALDQKRMRRLRRTSDRMGVPIPDLISEILRKMIDVWIAEAELPNKIVKFPTAAR*
Ga0070697_1012662663	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LNGFALDALDQKWMRRLRKTSDRMGVPIPDLIHEILRKMIVALIAEAELPNKIVKFPTAAR*
Ga0066697_100445082	3300005540	Soil	MRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPEFC*
Ga0066661_101083422	3300005554	Soil	MKAPPNIVKLRLDGFPLDALDQKRMRRLRRTSDQMGVPIPDLIREIVGQMIDAWIAEAELPHKIVKFPVAGRSRG*
Ga0066698_100999713	3300005558	Soil	MRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVAIPDLIREIVGQVIEIWLAEAELPNKIVTFPAAGR*
Ga0066705_108109632	3300005569	Soil	WLSNGRMKAPPNIVKLRLDGFPLDALDQKRMRRLRRTSDQMGVPIPDLIREIVGQMIDAWIAEAELPHKIVKFPVAGRSRG*
Ga0066694_104682481	3300005574	Soil	MRPPQNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPEFC*
Ga0066654_101973132	3300005587	Soil	MRTPPNVVKFRLAGFPLDALDQKRMRHLRRTSDQTGVPIPDLISEIVDQVIEIWLAEAELPNKIVKFPAARTIVSPEFC*
Ga0066903_1005107162	3300005764	Tropical Forest Soil	MKTPPNIVKFRPDGFPLYALDQKGMRRLRITSDRTGVPIPDLIRQILGQMIDAWISEAELPKKIVKFPTAAAR*
Ga0066903_1016438791	3300005764	Tropical Forest Soil	MKDPQNILKFRPNGFPLDALDQKGMRRLRITSDRIGVPIPDLLRDILGQMIDACIAEAELPNKIVKFPVRRAGSCS*
Ga0081455_1000462111	3300005937	Tabebuia Heterophylla Rhizosphere	VRTPPNVVQFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPELIREIVDQMIEIWLAEAELPNKIVTFPTAGR*
Ga0081455_100097915	3300005937	Tabebuia Heterophylla Rhizosphere	MKTPPNLVKFRLAGFPLDALDQKRMRRLRMTSDRTGVPIPDLLGQILGQIVDAWIAEAELPNKIVKFPAPYARVQNKQPKPRRRFGIL*
Ga0081455_100109329	3300005937	Tabebuia Heterophylla Rhizosphere	MNPPPNIVKFRLDGFPLDTLDQKRIRYLRITSDRTGVPIPELIRKALDQTIDAWTAEAELPNKIVKFPATAR*
Ga0081455_100156107	3300005937	Tabebuia Heterophylla Rhizosphere	MTPLVKFRLDGFPLDALDQKRMRRLRRTSDRMGVPIPDLIRRILSQMIDTWIAEAELPTKIVEFPAALR*
Ga0081455_100255118	3300005937	Tabebuia Heterophylla Rhizosphere	MKTPLNIVKFRLDGFPLDALDQERMRRLRRTSDRTGVPIPDLIRKILSQMVDAWIAEAELPTKLVKFPAASR*
Ga0081455_105138141	3300005937	Tabebuia Heterophylla Rhizosphere	MKTPPNILKFRPNGFPLDALDQKRMRHLRRTSDRIGVPIPDLLREILGQMIDACVAEAELPNKIVKFPARRAGSCS
Ga0081455_109394872	3300005937	Tabebuia Heterophylla Rhizosphere	MKGNVHMKKPPNLVKFRLNGVPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDVWIAEAELPNKIVKFPASVRACGE*
Ga0081540_10476474	3300005983	Tabebuia Heterophylla Rhizosphere	MKGNVHMKNPPNLVKFRLNGVPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDVWIAEAELPNKIVKFPASVRACGE*
Ga0081540_10669651	3300005983	Tabebuia Heterophylla Rhizosphere	MKTPPNILKFRPNGFPLDALDQKRMRHLRRTSDRIGVPIPDLLREILGQMIDACVAEAELPNK
Ga0070716_1000238594	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKTPPNIVKFRLNGFALDALDQKRMRRLRKTSDRMGVPIPDLIHEILRKMIVALIAEAELPNKIVKFPAAAR*
Ga0070716_1001117571	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKNPPNIVKLRLNGFPLDALDQKRMRRLRRTSDRIGVPIPDLIREILGQIIDACIAEAELPNKIVKFPARRTGSSSSIC*
Ga0070712_1004065061	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKNPQNILKFRPDGFPLDALDQKGMRRLRRTSDRIGVPIPDLLRDILGQMIDACIAEAELPNKIVKFPGRRPGSSCSIC*
Ga0079222_116391121	3300006755	Agricultural Soil	MRTPPNVVTFRLAGFPLDALDQKRLRRLRRKSEQTGVPIPDLMREIRDQVIKIWLAEAELPNKIVKFPAARR*
Ga0066665_101234532	3300006796	Soil	MRPPQNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVTFPAARTIVSPEFC*
Ga0066665_102918513	3300006796	Soil	MKTPPNIVKFRLAGFPLDALDQKRMRHLRRTSDQTGVPIPDLICEIVGQIIDAWMAEAELPNKIVKFPAT
Ga0066659_107547411	3300006797	Soil	MRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSSEFC*
Ga0075428_1005131502	3300006844	Populus Rhizosphere	MKPPPNIVKFRLNGFALDALDQKRMRRLRKTSDRMGVPIPDLISEILGKMIVAWIAEAELPNKIVKFPAAAR*
Ga0075433_103980501	3300006852	Populus Rhizosphere	MKTPPNIVKFRLNGFPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDAWIAEAELPNKIVKFPASVRACGE*
Ga0075433_107039821	3300006852	Populus Rhizosphere	LDGFPLDALDQKRMRRLRRTSDRIGVPIPDLIREILGQIFDACIAEAELPNKIVKFPARRAGSSSSIC*
Ga0075434_1002299753	3300006871	Populus Rhizosphere	MKPPPNIVKFRLNGFALDALDQKRMRRLRKTSDRMRVPIPDLISEILGKMIVAWIAEAELPNKIVKFPAAAR*
Ga0075434_1014123992	3300006871	Populus Rhizosphere	MKTPPNIVKFRLNGFPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDAWIAEAELPNKIVKFPAAVRACGE*
Ga0075435_1010536531	3300007076	Populus Rhizosphere	PPPNIVKFRLNGFPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDAWIAEAELPNKIVKFPAAVRACGE*
Ga0066710_1018588512	3300009012	Grasslands Soil	MRPPQNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIV
Ga0111539_124846011	3300009094	Populus Rhizosphere	MKNPPNIVKLRLNGFPLDALDQKRMRRLRRTSDRIGVPIPDLIREILGQIFDACIAEAELPNKIVKFPARRAGS
Ga0075418_116789261	3300009100	Populus Rhizosphere	MKNPPNIVKLRLNGFPLDALDQKRMRRLRRTSDRIGVPIPDLIREILGQIFDACIAEAELPNKIVKFPARRA
Ga0066709_1008813093	3300009137	Grasslands Soil	VKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPEFC*
Ga0075423_110337252	3300009162	Populus Rhizosphere	MKTSPNIVKFRLNGFPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDAWIAEAELPNKIVEFPAAVRACGE*
Ga0126374_108204191	3300009792	Tropical Forest Soil	MKKHMRTLTNVVKFRLAGFPVDALDQKRMRRLRRTSDRTGVPISDLISEIVGHVIEIWLAEAELPNKIVKFP
Ga0126380_101059422	3300010043	Tropical Forest Soil	MKGNVHMKKPPNIVKFCLNGIPLDALDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDVWIAEAELPNKIVKFPASVRACGE*
Ga0126380_108009901	3300010043	Tropical Forest Soil	MKPPPNIVKFRLNGFALDALDQKRMRRLRRTSDRMGVPIPDLISEILRKMIDVWIAEAELPNKIVKFP
Ga0126380_112346402	3300010043	Tropical Forest Soil	MKNPPNIVKLRLNGFPLDALDQKRMRRLRRTSDRIGVPIPDLIREILGQIFDACIAEAELPNKIVKFPAVGR*
Ga0126382_115068881	3300010047	Tropical Forest Soil	MRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPA
Ga0134070_104241362	3300010301	Grasslands Soil	LELWRQTRKRNNERKKHMRTPPNVVKFRLAGFPLDALDQKRMRRLRKTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVTFPAAGR*
Ga0134082_102368032	3300010303	Grasslands Soil	RKRNNERKKHMRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPEFC*
Ga0134109_103588671	3300010320	Grasslands Soil	VKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPQFC*
Ga0134084_100601932	3300010322	Grasslands Soil	VKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVTFPAAGR*
Ga0134065_104887731	3300010326	Grasslands Soil	FPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVTFPAAGR*
Ga0134063_102274832	3300010335	Grasslands Soil	VKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAA
Ga0134063_103063432	3300010335	Grasslands Soil	MKAPPNIVKLRLDGFPLDALDQKRMRRLRRTSDQMGVPIPDLIWEIVGQMIDAWIAEAELPQKIVKFPVAGRSRG*
Ga0126376_122693641	3300010359	Tropical Forest Soil	MRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVSHAIEIWLAEAELPNKIIKFPAAGG*
Ga0126378_124683982	3300010361	Tropical Forest Soil	MKNPQNILKFRPNGFPLDALDQKGMRRLRITSDRIGVPIPDLLRDILGQMIDACIAEAELPNKIVKFPVRRAGSCS*
Ga0126377_107352193	3300010362	Tropical Forest Soil	MKPPPNIVKFRLNGFALDALDQKRMRCLRKTSDRMGVPIPDLIHEILRRMIDALIAEAELPNKIVKFPAAAR*
Ga0126377_115573272	3300010362	Tropical Forest Soil	VKFRVDGFPVDALDQKRMRRLPRTSDRTGVPIPDLISEIVSHAIEIWLAEAELPNKIIKFPAAGG*
Ga0126377_128400921	3300010362	Tropical Forest Soil	MKGNVHMKNPPNLVKFRLNGVPLDTLDQKRMRRLRRTSDRMGVPIPDLISEIFGQMIDAWIAEAELPNKIVKFPAAVRACGE*
Ga0134066_100223812	3300010364	Grasslands Soil	MRTPQNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPEFC*
Ga0126379_122672611	3300010366	Tropical Forest Soil	LTANSEKEYERKNHMRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIIGQVIEVWLAEAELPNKIVRFPVAGR*
Ga0126381_1002472902	3300010376	Tropical Forest Soil	MKRPSNIVKFRLNGFALDALDQKRMRRLRRTSDRMGVPIPYLISEIFRKMIDVWIAEAELPKKIVKFPPAAR*
Ga0126381_1018368752	3300010376	Tropical Forest Soil	MTSKNIVKFRLNGFPVDALDQKRMRCLRLLSERTGAPIPQLIRSALDQAVAAWIAEAELPNKIVEFPAEIA*
Ga0126383_122801381	3300010398	Tropical Forest Soil	MEPPPNIVKFRLNGFALDALDQKRMRRLRRTSDRMGVPIPDLISEIFRKMIDVWVAEAELPNKIVKFPTAAR*
Ga0137382_110787002	3300012200	Vadose Zone Soil	MKTPPNIVKFRLAGFPLDALDQKRMRRLRRTSDQTGVPIPDLICEIVGQIIDAWMAEAELPNKIVKFPAT
Ga0137363_100842286	3300012202	Vadose Zone Soil	MKNPQNIVKLRLNGFPLDALDQKRMRRLRRMSDRMGVPIPDVIREILGQIIDACIAEAELPNKIVKFPAAAR*
Ga0137376_101761021	3300012208	Vadose Zone Soil	NVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPEFC*
Ga0137370_104335862	3300012285	Vadose Zone Soil	MKAPPNILKLRLNGFPLDALDQKRMRRLRRTSDQMGVPIPDLIWEIVGQMIDAWIAEAELPQKIVKFPVAGRSRG*
Ga0137387_112368861	3300012349	Vadose Zone Soil	MKAPPNIVKFRLNGFPLDALDQKRMRRLRRTSDQMGVPIPDLIRGIVGQIIDAWIAEAELPQKIVKFPVAGR*
Ga0137366_104979851	3300012354	Vadose Zone Soil	AVLHDRLSNGRMKAPPNILKLRLNGFPLDALDQKRMRRLRRTSDQMGVPIPDLIWEIVGQMIDAWIAEAELPQKIVKFPVAGRSRG*
Ga0137360_105590562	3300012361	Vadose Zone Soil	MKNPQNIVKLRLDGFPLDALDQKRMRGLRRMSDRMGVPIPDLIREILGQIIDACIAEAELPNKIVKFPAAAR*
Ga0137407_102428794	3300012930	Vadose Zone Soil	LAGKFGKGRNERKKHMKTPPNIVKFRLAGFPLDALDQKRMRRLRRTSDQTGVPIPDLICEIVGQIIDAWMAEAELPNKIVKFPATAR*
Ga0126375_103545983	3300012948	Tropical Forest Soil	MKGNVHMKNPPNLVKFRLNGVPLDALDQKRMRRLRRTSDQMGVPIPDLISEIFGQMIDVWIAEAELPNKIVKFPASVRACGE*
Ga0157378_108426881	3300013297	Miscanthus Rhizosphere	MKNPQNIVKLRLNGFPLDALDQKRMRRLRRTSERMGVPIPDLIRQILGQTIDACIAEAELPNKIVKFPAAAR*
Ga0157372_108000753	3300013307	Corn Rhizosphere	MKNPQNIVKLRLNGFSLDALDQKQMHRLRRTSDRIGVPIPNLIRQIIGQVIDVCIAEAELPNKIVKFPARRAR*
Ga0134078_100613912	3300014157	Grasslands Soil	VKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISETVGQVIEIWLAEAELPNKIVTFPAAGR*
Ga0137403_103611321	3300015264	Vadose Zone Soil	VKFRLAGFPLDALDQKRMRRLRRTSDQTGVPIPDLICEIVGQIIDAWMAEAELPNKIVKFPATAR*
Ga0134072_100941751	3300015357	Grasslands Soil	KHMRTPPNVVKFRLAGFPLDALDQKRMRRLRKTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPEFC*
Ga0132258_101333634	3300015371	Arabidopsis Rhizosphere	VKFRLAGLPVDALDQKRMRRLRRTSDRTGVPIPDLISEIVGHVIEIWLAEAELPNKIVKFPAAGR*
Ga0132255_1033150112	3300015374	Arabidopsis Rhizosphere	VKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGNVIETWLAEAELPSK
Ga0184608_103082132	3300018028	Groundwater Sediment	MKPPPNIVKFRLNGFALDALDQKRMRRLRRTSDRMGVPIPDLISEILRKMIDVWIAEAELPNKIVKFPAAER
Ga0066655_106585892	3300018431	Grasslands Soil	MRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVTFPAAGR
Ga0066667_105101702	3300018433	Grasslands Soil	MRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPEFC
Ga0066667_113033071	3300018433	Grasslands Soil	MKAPPNIVKLRLDGFPLDALDQKRMRRLRRTSDQMGVPIPDLIREIVGQMIDAWIAEAELPHKIVKFPVAGRSRG
Ga0066669_103435503	3300018482	Grasslands Soil	MKTPPNIVKFRLAGFPLDALDQKRMRRLRRTSDQTGVPIPDLICEIVGQIIDAWMAEAELPNKIVKFPATAR
Ga0173481_108849972	3300019356	Soil	MKPPPNIVKFRLNGFALDALDQKRMRRLRRISDRMGVPIPDLISEILRKMIDVWIAEAELPNKIVKFPASVRACGE
Ga0126371_118958081	3300021560	Tropical Forest Soil	SNIVKFRLNGFALDALDQKRMRRLRRTSDRMGVPIPYLISEIFRKMIDVWIVEAELPKKIVKFPPAAR
Ga0207666_10574792	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MKNPQNIVKLRLNGISLDALDQKQMHCLRRTSDRIGVPIPNLIRQIIGQVIDVCIAEAELPNKIVKFPARRAR
Ga0207697_105085003	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MKNPQNIVKLRLNGFSLDALDQKQMHCLRRTSDRIGVPIPNLIRQIIGQVIDVCIAEAELPNKIV
Ga0207693_111509532	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKTPPNIVKFRLNGFALDALDQKWMRRLRKTSDRMGVPIPDLIHEILRKMIVALIAEAELPNKI
Ga0207701_100028754	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKNPQNIVKLRLNGFSLDALDQKQMHRLRRTSDRIGVPIPDLIREIIGQIIDVCIAEAELPNKILKFPARRAR
Ga0209056_102399411	3300026538	Soil	MKAPPNIVKLRLDGFPLDALDQKRMRRLRRTSDQMGVPIPDLIREIVGQMIDPWIAEAELPHKIVKFPVAGRSRG
Ga0209056_107147412	3300026538	Soil	MRPPQNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVKFPAARTIVSPEFC
Ga0209376_10814103	3300026540	Soil	MRTPPNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEICLAEAELPNKIVTFPAAGR
Ga0209474_104767431	3300026550	Soil	MRPPQNVVKFRLAGFPLDALDQKRMRRLRRTSDRTGVPIPDLISEIVGQVIEIWLAEAELPNKIVTFPAAGR
Ga0075386_122177531	3300030916	Soil	MKTPQNIVKLRLNGLPLDALDQKRMRRLRRTSERMGVPIPDLIREILGQTIDACIAEAELPNKIVKFPAAAR
Ga0075383_113618421	3300030966	Soil	MKTPQNIVKLRLNGFPLDALDQKRMRRLRRTSERMGVPIPDLIREILGQTIDACIAEAELPNKIVKFPAAAR
Ga0170824_1000172711	3300031231	Forest Soil	PNVVKFRLAGFPLDALDQKRMRRLRRTSDQMGVPIPDLLSEIVSQMIDAWMAEAELPNKIVKFPAAAR
Ga0170824_1226997363	3300031231	Forest Soil	MKNPQNILKFRPDGFPLDALDQKQMHRLRRTSDRIGVPIPDLIREILGQTIDACIAEAELPNKIVKFPA
Ga0170819_130250581	3300031469	Forest Soil	MKNPQNILKFRLAGFPLDALDQKRMRRLRRTSDQMGVPIPDLLSEIVSQMIDAWMAEAELPNKIVKFPAAAR
Ga0170818_1003470404	3300031474	Forest Soil	MKNPQNILKFRPDGFPLDALDQKQMHRLRRTSERMGVPIPDLIREILGQVIDACIAEAELPNKIVKFPAAAR
Ga0307471_1012067023	3300032180	Hardwood Forest Soil	MKPPPNIVKFRLNGFALDALDQKRMRRLRKTSDRMGVPIPDLIHEILRKMIVALIAEAELPNKIVKFPTAAR
Ga0307471_1040109921	3300032180	Hardwood Forest Soil	MKNPQNILKFRPDGFPLDALDQKGMRRLRRTSDRIGVPIPDLLRDILGQMIDAWIAEAELPNKIVKFP
Ga0326723_0607966_312_506	3300034090	Peat Soil	MTPQKVVKFRMDGFPLDALDQKQMRRLRRMSDRTRVPIPNLISQALDQTIEAWTAEAELPNKIVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055152

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences