Metagenome / Metatranscriptome Family F055091

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055091
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	52 residues
Representative Sequence	RQRPPYTYEVQTSASGFRVVATRSGDDASGTPAQLSVDENMDFQTSQ
Number of Associated Samples	114
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.28 %
% of genes from short scaffolds (< 2000 bps)	84.89 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.806 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.389 % of family members)
Environment Ontology (ENVO)	Unclassified (25.180 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.676 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.00% β-sheet: 33.33% Coil/Unstructured: 62.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF03009	GDPD	3.60
PF00155	Aminotran_1_2	2.88
PF00255	GSHPx	2.88
PF01757	Acyl_transf_3	2.88
PF01520	Amidase_3	2.16
PF01058	Oxidored_q6	2.16
PF00326	Peptidase_S9	2.16
PF00437	T2SSE	1.44
PF06230	LpxI_C	1.44
PF01479	S4	1.44
PF00076	RRM_1	0.72
PF00561	Abhydrolase_1	0.72
PF03840	SecG	0.72
PF00593	TonB_dep_Rec	0.72
PF05336	rhaM	0.72
PF02897	Peptidase_S9_N	0.72
PF12704	MacB_PCD	0.72
PF07883	Cupin_2	0.72
PF00291	PALP	0.72
PF04366	Ysc84	0.72
PF00857	Isochorismatase	0.72
PF14684	Tricorn_C1	0.72
PF12867	DinB_2	0.72
PF01425	Amidase	0.72
PF01810	LysE	0.72
PF01408	GFO_IDH_MocA	0.72
PF03176	MMPL	0.72
PF14559	TPR_19	0.72
PF13174	TPR_6	0.72
PF15780	ASH	0.72
PF03544	TonB_C	0.72
PF13620	CarboxypepD_reg	0.72
PF04542	Sigma70_r2	0.72
PF13602	ADH_zinc_N_2	0.72
PF13578	Methyltransf_24	0.72
PF04228	Zn_peptidase	0.72
PF08013	GatZ_KbaZ-like	0.72
PF13432	TPR_16	0.72
PF17164	DUF5122	0.72
PF00873	ACR_tran	0.72
PF11008	DUF2846	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	3.60
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	2.88
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	2.16
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	2.16
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	2.16
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	2.16
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	2.16
COG3494	Uncharacterized conserved protein, DUF1009 family	Function unknown [S]	1.44
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.72
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.72
COG4573	Tagatose-1,6-bisphosphate aldolase non-catalytic subunit AgaZ/GatZ	Carbohydrate transport and metabolism [G]	0.72
COG3254	L-rhamnose mutarotase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.72
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.72
COG2321	Predicted metalloprotease	General function prediction only [R]	0.72
COG1770	Protease II	Amino acid transport and metabolism [E]	0.72
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.72
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.72
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.72
COG1314	Protein translocase subunit SecG	Intracellular trafficking, secretion, and vesicular transport [U]	0.72
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.72
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.72
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.72
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.53 %
Unclassified	root	N/A	6.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.53 %
Unclassified	root	N/A	6.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.81 %
Unclassified	root	N/A	6.47 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.22 %
Unclassified	root	N/A	6.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.44 %
Haptista	clade	All Organisms → cellular organisms → Eukaryota → Haptista	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.39 %
Unclassified	root	N/A	6.47 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.72 %
Haptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	13.67 %
Unclassified	root	N/A	6.47 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %
Prymnesiophyceae	clade	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae	0.72 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.72 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13.67 %
Unclassified	root	N/A	6.47 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.72 %
Phaeocystales	order	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales	0.72 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.71 %
Unclassified	root	N/A	6.47 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	3.60 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.60 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.44 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.72 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.72 %
Phaeocystaceae	family	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae	0.72 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	0.72 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.71 %
Unclassified	root	N/A	6.47 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2.16 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	1.44 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.44 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.72 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.72 %
Phaeocystis	genus	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis	0.72 %
Meiothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	0.72 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.71 %
Unclassified	root	N/A	6.47 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2.16 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1.44 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.44 %
Meiothermus silvanus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus silvanus	0.72 %
Phaeocystis cordata	species	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis → Phaeocystis cordata	0.72 %
Corallococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus	0.72 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.72 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.71 %
Unclassified	root	N/A	6.47 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2.16 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1.44 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.44 %
Allomeiothermus silvanus DSM 9946	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus silvanus → Allomeiothermus silvanus DSM 9946	0.72 %
Corallococcus exiguus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus exiguus	0.72 %
Phaeocystis cordata	species	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis → Phaeocystis cordata	0.72 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.72 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1000321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8385	Open in IMG/M
3300001356\|JGI12269J14319_10153303	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300001593\|JGI12635J15846_10095966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2136	Open in IMG/M
3300001593\|JGI12635J15846_10226385	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300001867\|JGI12627J18819_10025161	All Organisms → cellular organisms → Bacteria → Acidobacteria	2447	Open in IMG/M
3300004082\|Ga0062384_101224550	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300004091\|Ga0062387_101638074	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300004092\|Ga0062389_102304617	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300004092\|Ga0062389_103009562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300004479\|Ga0062595_100569019	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300005439\|Ga0070711_101548957	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300005445\|Ga0070708_100403410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300005468\|Ga0070707_100685769	All Organisms → cellular organisms → Bacteria → Acidobacteria	987	Open in IMG/M
3300005542\|Ga0070732_10896399	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300005554\|Ga0066661_10295215	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis → Phaeocystis cordata	999	Open in IMG/M
3300005607\|Ga0070740_10354353	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005610\|Ga0070763_10012895	All Organisms → cellular organisms → Bacteria	3504	Open in IMG/M
3300005712\|Ga0070764_10999899	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005921\|Ga0070766_11281865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	508	Open in IMG/M
3300006034\|Ga0066656_10014243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4102	Open in IMG/M
3300006059\|Ga0075017_100702332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300006086\|Ga0075019_10420569	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300006174\|Ga0075014_100547675	Not Available	654	Open in IMG/M
3300006175\|Ga0070712_101654223	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300006176\|Ga0070765_100985274	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300006176\|Ga0070765_102272739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300006804\|Ga0079221_11236894	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300006893\|Ga0073928_10289628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300006903\|Ga0075426_10979431	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300007788\|Ga0099795_10504164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus exiguus	565	Open in IMG/M
3300009029\|Ga0066793_10291229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	944	Open in IMG/M
3300009090\|Ga0099827_10016818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4958	Open in IMG/M
3300009518\|Ga0116128_1164606	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300009524\|Ga0116225_1313394	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300009628\|Ga0116125_1084474	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300009644\|Ga0116121_1069374	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102	Open in IMG/M
3300009839\|Ga0116223_10048219	All Organisms → cellular organisms → Bacteria → Acidobacteria	2794	Open in IMG/M
3300009839\|Ga0116223_10895673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	506	Open in IMG/M
3300012199\|Ga0137383_10741208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300012210\|Ga0137378_10315989	All Organisms → cellular organisms → Bacteria → Acidobacteria	1453	Open in IMG/M
3300012918\|Ga0137396_10403933	All Organisms → cellular organisms → Bacteria → Acidobacteria	1012	Open in IMG/M
3300012922\|Ga0137394_11086989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300012971\|Ga0126369_12499620	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300014153\|Ga0181527_1426660	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300014160\|Ga0181517_10227590	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300014168\|Ga0181534_10102995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1432	Open in IMG/M
3300014501\|Ga0182024_11497893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300014838\|Ga0182030_11053818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	710	Open in IMG/M
3300014838\|Ga0182030_11469979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	564	Open in IMG/M
3300015054\|Ga0137420_1460611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4057	Open in IMG/M
3300017942\|Ga0187808_10297701	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300017955\|Ga0187817_10965823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300017955\|Ga0187817_11068859	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300017966\|Ga0187776_10696735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300017975\|Ga0187782_11297525	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300017988\|Ga0181520_10475931	Not Available	889	Open in IMG/M
3300017988\|Ga0181520_11037805	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300017995\|Ga0187816_10068749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1499	Open in IMG/M
3300017995\|Ga0187816_10096018	All Organisms → cellular organisms → Bacteria → Acidobacteria	1270	Open in IMG/M
3300018002\|Ga0187868_1174269	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300018026\|Ga0187857_10472559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300018030\|Ga0187869_10395016	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300018034\|Ga0187863_10639522	Not Available	599	Open in IMG/M
3300018038\|Ga0187855_10075502	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300018047\|Ga0187859_10118115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1398	Open in IMG/M
3300018047\|Ga0187859_10654060	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300018057\|Ga0187858_10533799	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300018088\|Ga0187771_10337738	All Organisms → cellular organisms → Bacteria → Acidobacteria	1265	Open in IMG/M
3300019786\|Ga0182025_1109660	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300020581\|Ga0210399_10953901	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300020581\|Ga0210399_11230155	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300020583\|Ga0210401_11570859	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300021088\|Ga0210404_10675880	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300021171\|Ga0210405_10668887	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300021171\|Ga0210405_10949889	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300021180\|Ga0210396_10386691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1231	Open in IMG/M
3300021402\|Ga0210385_10477933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300021407\|Ga0210383_10077164	All Organisms → cellular organisms → Bacteria → Acidobacteria	2788	Open in IMG/M
3300021420\|Ga0210394_10276153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1472	Open in IMG/M
3300021420\|Ga0210394_10764043	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300021420\|Ga0210394_11577509	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300021433\|Ga0210391_10729558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300021474\|Ga0210390_10290492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1385	Open in IMG/M
3300021475\|Ga0210392_10449423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus silvanus → Allomeiothermus silvanus DSM 9946	945	Open in IMG/M
3300021478\|Ga0210402_11243416	Not Available	672	Open in IMG/M
3300022532\|Ga0242655_10013210	Not Available	1635	Open in IMG/M
3300022722\|Ga0242657_1049152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	920	Open in IMG/M
3300023250\|Ga0224544_1009388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1321	Open in IMG/M
3300024295\|Ga0224556_1008436	All Organisms → cellular organisms → Bacteria	2737	Open in IMG/M
3300024295\|Ga0224556_1029569	All Organisms → cellular organisms → Bacteria → Acidobacteria	1376	Open in IMG/M
3300025916\|Ga0207663_11099353	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300026355\|Ga0257149_1051440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300027370\|Ga0209010_1050647	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300027576\|Ga0209003_1089296	Not Available	577	Open in IMG/M
3300027678\|Ga0209011_1115597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300027701\|Ga0209447_10015821	All Organisms → cellular organisms → Bacteria → Acidobacteria	2135	Open in IMG/M
3300027738\|Ga0208989_10025143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2055	Open in IMG/M
3300027768\|Ga0209772_10067848	All Organisms → cellular organisms → Bacteria → Acidobacteria	1074	Open in IMG/M
3300027795\|Ga0209139_10349741	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300027824\|Ga0209040_10410007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	627	Open in IMG/M
3300027842\|Ga0209580_10450495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300027842\|Ga0209580_10459153	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300027846\|Ga0209180_10414995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300027869\|Ga0209579_10023156	All Organisms → cellular organisms → Bacteria	3465	Open in IMG/M
3300027869\|Ga0209579_10030289	All Organisms → cellular organisms → Bacteria	2954	Open in IMG/M
3300028013\|Ga0265350_104353	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300028016\|Ga0265354_1002362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2359	Open in IMG/M
3300028036\|Ga0265355_1012262	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300028036\|Ga0265355_1018156	Not Available	602	Open in IMG/M
3300028047\|Ga0209526_10694698	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300028806\|Ga0302221_10222426	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300028906\|Ga0308309_10760199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	842	Open in IMG/M
3300029882\|Ga0311368_10207090	All Organisms → cellular organisms → Bacteria → Acidobacteria	1549	Open in IMG/M
3300029903\|Ga0247271_102640	Not Available	3899	Open in IMG/M
3300029910\|Ga0311369_11240098	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300029951\|Ga0311371_11265568	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300030057\|Ga0302176_10056367	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300030057\|Ga0302176_10082056	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300030617\|Ga0311356_11675662	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300030815\|Ga0265746_1043265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300031122\|Ga0170822_10052980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300031231\|Ga0170824_109757938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300031474\|Ga0170818_100833771	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300031474\|Ga0170818_108882263	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300031524\|Ga0302320_10237196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2532	Open in IMG/M
3300031524\|Ga0302320_11361721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	710	Open in IMG/M
3300031715\|Ga0307476_10078563	All Organisms → cellular organisms → Bacteria → Acidobacteria	2299	Open in IMG/M
3300031715\|Ga0307476_10212920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1405	Open in IMG/M
3300031715\|Ga0307476_10335131	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300031715\|Ga0307476_10490097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300031754\|Ga0307475_11242516	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300031823\|Ga0307478_10311921	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300031823\|Ga0307478_11231709	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031962\|Ga0307479_11174227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300032828\|Ga0335080_10715631	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300033134\|Ga0335073_10116025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3438	Open in IMG/M
3300033829\|Ga0334854_045137	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300033982\|Ga0371487_0305137	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.40%
Host-Associated	Host-Associated	3.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.66%
Aquatic	Environmental → Aquatic	23.74%
Plants	Host-Associated → Plants	3.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.59%
Freshwater	Environmental → Aquatic → Freshwater	20.86%
Peat	Environmental → Terrestrial → Peat	10.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Sediment	Environmental → Aquatic → Sediment	2.16%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.86%
Loam	Environmental → Terrestrial → Soil → Loam	13.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.16%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.07%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.07%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.60%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.44%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.39%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.04%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.16%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.16%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.44%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.44%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.44%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.44%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028013	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE2	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10003211	3300000546	Quercus Rhizosphere	AHYITVSRQRPPYTYEIEISSTGFRVVALRSGDSASGTPAQLSMDENMDFQTSE*
JGI12269J14319_101533032	3300001356	Peatlands Soil	NTITVARQRPPYSYAIELGNGGFRVVATRSGQNLAGTPAQLSVDENMEFQTSE*
JGI12635J15846_100959666	3300001593	Forest Soil	SASGFRVLATRSGENIGGTPAQLSVDENMQFQMSE*
JGI12635J15846_102263851	3300001593	Forest Soil	ISSNYLTIARQRPPYTYEIQTSSGGFRAVATRSGDDASGTPAQLSVDENMDFQTSQ*
JGI12627J18819_100251613	3300001867	Forest Soil	DDLISANYISLRRQRPPYSYEVEMNSSGFRAVATRSGDINSGTPRELSVDQDMDFKTSE*
Ga0062384_1012245501	3300004082	Bog Forest Soil	THYLSVARQRPPYIYAVELSSGGFRVVATRSGDDGSGVPAQISVDQDMEFRTSQ*
Ga0062387_1016380742	3300004091	Bog Forest Soil	SEGKYASFDELISSNYITLARQRPPYSYEVQTSSSGFRVVATRSGDDASGTPAQLSVDENMEFQTSP*
Ga0062389_1023046172	3300004092	Bog Forest Soil	ATEGKYVSLEELISSNNLTVGRQRLPYSYSVELNSGSFRVVATRSGDNPSGTPAQLSVDDNMQFQTSQ*
Ga0062389_1030095622	3300004092	Bog Forest Soil	ALDELISTHYITVARQRPPYSYAVEIGEGGFRVVATRSGDKSSGLPAQLSVDENMEFQTSE*
Ga0062595_1005690191	3300004479	Soil	EGKYVSLDDLISTNYITIARQRPPYTYSVELGSGGFRVVATRSGENLAGTPAQLSVDDSMQFQTSE*
Ga0070711_1015489572	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LISSRSMSVARQRQPYTYDVETSGSGFRVVATRSGDDASGLPAQLSVDENMQFQSSQ*
Ga0070708_1004034102	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SFDELVSSNYMTVARQRTPYTYDVETSSGGFHVVATRSGDDGSGTPARLSVDENMEFQTSQ*
Ga0070707_1006857692	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FASEGRYGSFDDLVSANYISLRRQRPPYSYEVEISSSRFRVVATRPSDINSGTPRELSVDENMDFQTSE*
Ga0070732_108963993	3300005542	Surface Soil	RQRAPYSYEIETNGSGFHVIATRSGDDASGAPAQLSVDENMQFQTTQ*
Ga0066661_102952151	3300005554	Soil	LSVARQRLPYSYDIETSGSGFRVVASRTSEDKSGAPAQISVDENMQFQVVQ*
Ga0070740_103543532	3300005607	Surface Soil	TISRERPPYTYDVETGSGGFRVIATRHGDDVSGAPAQLSVNENMEFQTE*
Ga0070763_100128951	3300005610	Soil	YASFDELISSNYITLARRRPPYSYEVESSSTGFRVVATRSGDDASGMPAQLSVDENMEFQTSP*
Ga0070764_109998991	3300005712	Soil	VAQQRPPYTYEIQTSSTGFRAVAARSGDDNSGTPAQLSIDENMEVQTSQ*
Ga0070766_112818651	3300005921	Soil	VARQRPPYSYEVETSASGFHVVATRSGDNSSGTPARLSVDENMEFQTSE*
Ga0066656_100142436	3300006034	Soil	LSVARQRLPYSYDIETSGSGFRVVASRKGEDNSGAPAQISVDENMQFQTVQ*
Ga0075017_1007023322	3300006059	Watersheds	GRSMTVTRQRPPYSYEIETSSGGFRVVATRTGADNSGTPAQLSVDENMQFHSSE*
Ga0075019_104205691	3300006086	Watersheds	KYVSLDEMISANYITVRKQRPPYSYAVELSSGGFRVVATRSGENIGGTPAELSVDENMEFKTSE*
Ga0075014_1005476751	3300006174	Watersheds	YISVRRQRPPYSYEVEMNSSGFRAVATRSGDINSGTPRELSVDQDMEFKTSE*
Ga0070712_1016542231	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GSGFRVVATRSGDDASGLPAQLSVDENMQFQSSQ*
Ga0070765_1009852741	3300006176	Soil	YFATEGKYASIDELISSGYMSITRQRPPYTYEVQTTATGFRVLATRSGSDNSGTPAQLSVDENMDFQTTP*
Ga0070765_1022727391	3300006176	Soil	GNGFHVVATRSGDNTGGTPGQLSVDENMEFQATE*
Ga0079221_112368942	3300006804	Agricultural Soil	QRQPYTYDVETSGSGFRVVATRSGDDASGLPAQLSVDENMQFQSFQ*
Ga0073928_102896283	3300006893	Iron-Sulfur Acid Spring	SFDELVSANYISVARQRPPYSYEVQPSSSGFHVVATRSGANIGGTPAQLSVDENMEFQSSE*
Ga0075426_109794312	3300006903	Populus Rhizosphere	DLISSRSLSVARQRLPYSYDIETSGSGFRVVANRTGEDNSGAPAQIWVDENMQFQVVQ*
Ga0099795_105041641	3300007788	Vadose Zone Soil	QTSSSGFRVVATRSGDNTSGTPAQLSVDENMEFQTSE*
Ga0066793_102912292	3300009029	Prmafrost Soil	SSGFRVIATRSGDNTSGTPAQLSVDENMEFQTSE*
Ga0099827_100168181	3300009090	Vadose Zone Soil	ITIARQRPPYAYEVQISSSGFRAVAISSGDSTADTPAQLSVDEKMEFQTSE*
Ga0116128_11646062	3300009518	Peatland	ARQRPPYSYEVQTSSSGFRVVATRSGDDNSGTPAQLSIDENMDVQTSQ*
Ga0116225_13133941	3300009524	Peatlands Soil	TSSGFRVVATRSGENISGTPAQLSVDENMEFQTSE*
Ga0116125_10844741	3300009628	Peatland	RPPYTYEVQTSASGFRVVATRSGDDASGTPAQLSVDENMDFQTSQ*
Ga0116121_10693743	3300009644	Peatland	SGGFRVVATRSGDDTSGTPAQLSVDENMDFQTSD*
Ga0116223_100482191	3300009839	Peatlands Soil	YSYAVELGNGGFRVVAIRSGQNLAGTPTQLSVDENMEFQTSE*
Ga0116223_108956731	3300009839	Peatlands Soil	ELVSNNYMGVSKQRPPYSYEIQTSSSGFRVVANRTGDDASGTPAQLYVDENMEFHTSE*
Ga0137383_107412081	3300012199	Vadose Zone Soil	TIVRQRPPYAYDVQTSSGGFRVVASRSGDDTSGTPARLSVDENMEFQSSQ*
Ga0137378_103159891	3300012210	Vadose Zone Soil	YISVGRQRPPYSYAVELNSGGFRVVATRSGGNADGTPSQISVDENMEFQTSE*
Ga0137396_104039333	3300012918	Vadose Zone Soil	SSSGFRVVAIRSGDSTSGTPAQLSVDENMEFQTSE*
Ga0137394_110869892	3300012922	Vadose Zone Soil	SFDELISTHYITVARQRPPYSYEVQTSSSGFHAVATRSGDDISGTPAQLSVDENMEFQTSE*
Ga0126369_124996201	3300012971	Tropical Forest Soil	TIVQAERGYFALEGKYAPLDELISSHSLSVARQRPPYSYEIGSGGSGFRVLATRSGDDASGAPSQLSVDENMQFSSSQ*
Ga0181527_14266601	3300014153	Bog	NYITVARQRPPYTYDVQTSSNGFRVVATRSGDDTSGSPAQVSVDENMEFQTSQ*
Ga0181517_102275902	3300014160	Bog	VSNHYVTVARQRPPYSYEVQTSSSGFRVVATRSGDDNSGTPAQLSIDENMDVQTSQ*
Ga0181534_101029951	3300014168	Bog	KYASLDELISTKSLTVAPQRPPYTYEIQTSSTGFRVIATRSGDNASGTPAQLSVDENMEFRSEQ*
Ga0182024_114978931	3300014501	Permafrost	SVARQRPPYAYAVEVSSGSSGFRVIATRTGDNTSGTPAQLSVDENMEFQTSP*
Ga0182030_110538181	3300014838	Bog	PYSYEIQISSSGFRVVATRAGDDGSGTPAQLWVDENMEFQTSE*
Ga0182030_114699792	3300014838	Bog	STNYITIARQRPPYTYDIQISSSGFRVVATRSGDDGSGTPAQLWVDENMEFQTSE*
Ga0137420_14606119	3300015054	Vadose Zone Soil	YTYEVQTSSSGFRVVAIRSGDNTSGTPAQLSVDENMEFQTSE*
Ga0187808_102977012	3300017942	Freshwater Sediment	SVTVARQRPPYTYEVDTSSGGFHVVATRTGADDGSGTPARLSVDENMEFQQSQ
Ga0187817_109658233	3300017955	Freshwater Sediment	TYEVQTSASGFRVVATRSGENTSGTPTQLSVDENMEFQASE
Ga0187817_110688592	3300017955	Freshwater Sediment	PPYTYQIQTSSSGFRVVATRSGDDASGTPAQLSVDENMEFQTSE
Ga0187776_106967351	3300017966	Tropical Peatland	YEIETSSSGFRVVATRSGDDNSGTPVQLSVDENMEFQTSQ
Ga0187782_112975252	3300017975	Tropical Peatland	SNYITVARQRPPYTYEVETSSSSFRVIATRTADDGSGTPAQLSVDENMEFQTSQ
Ga0181520_104759311	3300017988	Bog	HAITITRQRPPYTYEVETGAGSFRVVATRSTDDGSGMPAQLSVDQNMEFSQSQ
Ga0181520_110378051	3300017988	Bog	ELISTNSTTVARQRPPYTYEIQTTSTGFRVVATRSGDTASGTPAQISIDENMEFQISE
Ga0187816_100687494	3300017995	Freshwater Sediment	VARQRPPYTYEVQTSASGFRVVATRSGENTSGTPTQLSVDENMEFQASE
Ga0187816_100960181	3300017995	Freshwater Sediment	QRPPYTYEVQTSASGFRVVATRSGENTSGTPAQLSVDENMEFQASE
Ga0187868_11742693	3300018002	Peatland	TVARQRPPYTYSVETSSNGFRVVATRSGDDSSGGPAQLSVDENMEFQTSQ
Ga0187857_104725593	3300018026	Peatland	PPYTYEVQTSSSGFRVVATRSGDDASGTPAQLSVDENMEFQTSQ
Ga0187869_103950161	3300018030	Peatland	YASLDELVSNHYVTVARQRPPYSYEVQTSSSGFRVVATRSGDDNSGTPAQLSIDENMDVQTSQ
Ga0187863_106395221	3300018034	Peatland	GGGGFRVVATRSTDDGSGTPAQMSVDDNMAFNESQ
Ga0187855_100755025	3300018038	Peatland	RQRPPYTYEVQTSASGFRVVATRSGDDASGTPAQLSVDENMDFQTSQ
Ga0187859_101181154	3300018047	Peatland	ELISNHDVTMRQRPPYSYDIEISSSGFRVVATRSGDDGSGTPAQLSVDENLEFKTSE
Ga0187859_106540602	3300018047	Peatland	PPYTYEVQTSASGFRVVATRSGDDASGTPAQLSVDENMDFQTSQ
Ga0187858_105337991	3300018057	Peatland	YATEGKYASLLELISTNSVSVARQRPPYSYTVDINPSGFRVVATRAGDSASGTPAQLSVDENMEFQTSE
Ga0187771_103377382	3300018088	Tropical Peatland	RQRPPYTYEVETNSGGFRVVATRTADDGSGTPARLSVDENMEFQTSQ
Ga0182025_11096601	3300019786	Permafrost	GKYGRYFATEGKYASFDELISSNYITVARQRPPYTYEIETTASGFRAVATRSGDDASGTPAQVSVDENMDFQTSQ
Ga0210399_109539011	3300020581	Soil	ASLDELISSNYVTIARQRPPYTYDIQTSASGFRVVATRSGDDASGTPAQLSVDENMDFQTSP
Ga0210399_112301551	3300020581	Soil	ASLDELISSRSMSVARQRTPYSYEIETSGSGFRVIATRSGDDASGAPAQLSVDENMQFQTTQ
Ga0210401_115708592	3300020583	Soil	NITVARQRPPYSYAVELGGSGFRVVATRSGENYAGTPAQLSVDENMQFQSSE
Ga0210404_106758801	3300021088	Soil	NHAVTMRQRPPYTYEVETSSSGFRVVATRSGDDGSGTPAQLSVDENMEFKTSE
Ga0210405_106688872	3300021171	Soil	ANHAVTMRQRPPYTYEVETSSSGFRVVATRSGDDGSGTPAQLSVDENMEFKTSE
Ga0210405_109498892	3300021171	Soil	YSYSVEVSGGGFRVVATRSGDNISGTPAQLSVDDNMQFQSSE
Ga0210396_103866912	3300021180	Soil	MDELISSHTITVARQRPPYFYEVETSASGFRVVATRAGENTSGTPAQLSVDENMEFQTTE
Ga0210385_104779332	3300021402	Soil	TVTRQRPPYSYDVETSANGFRVVATRAGENTAGTPAQLSVDENMEFQTTE
Ga0210383_100771644	3300021407	Soil	IARQRPPYTYEIQTSSGGFRAVATRSGDDASGTPAQLSVDENMDFQTSQ
Ga0210394_102761531	3300021420	Soil	PPYAYAVEVSSGSSGFRVIATRSGDNTSGTPAQLSVDENMEFQTSP
Ga0210394_107640431	3300021420	Soil	TSASGFRVVATRSGDDASGTPAQLSVDENMDFQTSP
Ga0210394_115775091	3300021420	Soil	SNNITVARQRLPYSYAVEISSGGFRVVATRSSDNPSGTPAELSVDENMQFQTSE
Ga0210391_107295581	3300021433	Soil	PPYSYEVETSPSGFRVVATRAGENTSGTPAQLSVDENMEFQTTE
Ga0210391_110535802	3300021433	Soil	TTERRYFATEGKYASIDELISSGYMSITRQRPPYTYEVQTTATGFRVLATRSGSDNSGTPAQLSVDENMDFQTTP
Ga0210390_102904921	3300021474	Soil	YSYEVETSSSGFRVVATRSGDDGSGTPAQLSVDENMEFKASE
Ga0210392_104494232	3300021475	Soil	RQRPPYTYDIETSGGGFHVIATRSGDDSSGTPLQLSVDENMEFQSSE
Ga0210402_112434161	3300021478	Soil	GKYASFDELISSRSLTVSRQRPPYTYEVQTSGSGFRVIATRSRDDASGTPAELSVDQDMQFQQSQ
Ga0242655_100132102	3300022532	Soil	LISANYITFARERPPYSYSVEISFGGFRVVATRAEGDSSGTPSQLSVDQSMEFRTSE
Ga0242657_10491521	3300022722	Soil	SYAVETSSSGFHVVATRSGENLGGTPAQLSVDENMEVQTTE
Ga0224544_10093881	3300023250	Soil	NYITVARQRPPYTYEVETSSSGFRVVATRSGDDGSGTPARLSVDENIEFEVSQ
Ga0224556_10084366	3300024295	Soil	DINPSGFRVVATRAGDSASGTPAQLSVDENMEFQTSE
Ga0224556_10295693	3300024295	Soil	RQRPPYTYDIQISSSGFRVVATRSGDDGSGTPAQLWVDENMEFQTSE
Ga0207663_110993532	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ISSRSMSVARQRQPYTYDVETSGSGFRVVATRSGDDASGLPAQLSVDENMQFQSSQ
Ga0257149_10514402	3300026355	Soil	SVARQRPPYTYEVQTSSNGFRVVAIRSGDNTSGTPAQLSVDENMEFQTSE
Ga0209010_10506471	3300027370	Forest Soil	DELISSNYLTIARQRPPYTYEIQTSSGGFRAVATRSGDDASGTPAQLSVDENMDFQTSQ
Ga0209003_10892961	3300027576	Forest Soil	DDLISANYISLRRQRPPYSYEVEMNSSGFRAVATRSGDINSGTPRELSVDQDMDFKTSE
Ga0209011_11155973	3300027678	Forest Soil	PYTYEVQTSASGFRVVAIRSGDDTSGTPAQLSVDENMEFQTSE
Ga0209447_100158213	3300027701	Bog Forest Soil	KYASLDELISSNYITVARQRPPYIYEVETRPDGFRAVANRSGDGTPGTPAQFSVNENMEFQSSE
Ga0208989_100251431	3300027738	Forest Soil	DELISTNYITVARQRPPYTYEVQTSSSGFRVVAIRSGDNTSGTPAQLSVDENMEFQTSE
Ga0209772_100678483	3300027768	Bog Forest Soil	EVQTSSSGFRVVATRSGDDASGTPAQLSVDENMDFQTSQ
Ga0209139_103497411	3300027795	Bog Forest Soil	HAVTMRQRPPYSYEIETSSSGFRVIATRSGDDSSGTPAQLSVDENMEFKTSE
Ga0209040_104100071	3300027824	Bog Forest Soil	SFDELISSNYITVARQRPPYSYEVETSSSGFRVVATRSGDNSSGTPARLSVDENMEFQTS
Ga0209580_104504951	3300027842	Surface Soil	EINSSGFRVVATRTGGDSAGVPAQLSVDQNMDFQQSE
Ga0209580_104591532	3300027842	Surface Soil	RQRQPYTYDVETSGTGFRVVATRSGDDASGLPAQLSVDENMQLQSSQ
Ga0209180_104149952	3300027846	Vadose Zone Soil	RPPYSYEVQTTSSGFRVVASRSGDNISGTPGQLSVDENMEFQTSE
Ga0209579_100231561	3300027869	Surface Soil	QTGSSGFRAVATRSGDAASGTPAELSVDENMEFSQSQ
Ga0209579_100302894	3300027869	Surface Soil	DIQTSGGGFHVVATRSGDDSSGTPSQLSVDENMEFQSTQ
Ga0265350_1043532	3300028013	Soil	SNYLTIARQRPPYSYEIQTSSSGFRAVATRSGDDASGTPAQLSVDENMDFQTSQ
Ga0265354_10023621	3300028016	Rhizosphere	KLVAAGYITVVRQRPPYTYEVQIGSSGFRVVATRSGDNTSGTPAQLSVDENMEFQTSK
Ga0265355_10122621	3300028036	Rhizosphere	SYEIQTSSSGFRAVATRSGDDASGTPAQLSVDENMDFQTSQ
Ga0265355_10181562	3300028036	Rhizosphere	GTLDEMIESHYISVARQRPPYSYEVQIGSSGFRVVATRAADDKSGSPAQIAVDENLEFQMTQ
Ga0209526_106946982	3300028047	Forest Soil	YYASEGKYGSFDDLLSANYISLRRQRPPYSYEVEMNSSGFRAVATRSGDIDSGTPRELSVDQNMDFRTSE
Ga0302221_102224261	3300028806	Palsa	YASLVELISTNSVSVARQRPPYSYSVEITPASFRVVATRSGDSPAGTPSTLSVDENMEFQTTE
Ga0308309_107601992	3300028906	Soil	YFATEGKYASIDELISSGYMSITRQRPPYTYEVQTTATGFRVLATRSGSDNSGTPAQLSVDENMDFQTTP
Ga0311368_102070901	3300029882	Palsa	ARQRPPYTYEVETSSSGFRVVATRSGDDGSGTPARLSVDENMEFEVSQ
Ga0247271_1026401	3300029903	Soil	SSGGFRVIATRSGENTSGTPAQLSVDQDMEFQTAQ
Ga0311369_112400982	3300029910	Palsa	VSVARQRPPYSYSVEITPASFRVVATRSGDSPAGTPSTLSVDENMEFQTTE
Ga0311371_112655681	3300029951	Palsa	LPYTYEVQTSASGFRVVATRSGDDASGTPAQLSVDENMDFQTSQ
Ga0302176_100563671	3300030057	Palsa	ARQRPPYSYSVEITPASFRVVATRSGDSPAGTPSTLSVDENMEFQTTE
Ga0302176_100820563	3300030057	Palsa	TYEVQTSASGFRVVATRSGDDASGTPAQLSVDENMDFQTSQ
Ga0311356_116756621	3300030617	Palsa	LLSSNYISVARQRPPYSYSIEISSGGFRVVATRSGANTAGTPAQLSVDQDMEFQTSE
Ga0265746_10432652	3300030815	Soil	YEVQMGSSGFRVVATRAGDDKSGSPAQIAVDENLEFQMTQ
Ga0170822_100529801	3300031122	Forest Soil	YTYDVETSSGGFRVVATRSGDDGSGTPAQMSVDENMEFQSSQ
Ga0170824_1097579381	3300031231	Forest Soil	IARQRPPYTYDVETSSGGFRVVATRSGDDTSGTPARLSVDENMEFQSSN
Ga0170818_1008337711	3300031474	Forest Soil	LISTNYISVARQRPPYSYAVELGSNSFRVVATRSGENLAGTPAQLSVDENMEFQTTD
Ga0170818_1088822631	3300031474	Forest Soil	EGKYASFDELVSSNTITVARQRTPYTYDVETSSGGFRVVATRSGDDGSGTPARMSVDENMEFQTSQ
Ga0302320_102371961	3300031524	Bog	TNYITMARQRPPYSYEIQISSSGFRVVATRAGDDGSGTPAQLSVDENMEFQTSE
Ga0302320_113617212	3300031524	Bog	TNYITMARQRPPYSYEIQISSSGFRVVATRAGDDGSGTPAQLWVDENMEFQTSE
Ga0307476_100785631	3300031715	Hardwood Forest Soil	DELVSSNYITVARQRTPYTYDVETSSGGFRVVATRSGDDGSGTPARLSVDENMEFQTSP
Ga0307476_102129203	3300031715	Hardwood Forest Soil	GKYASFDELVSANYISVARQRPPYSYEVQTSSSGFHVVATRSGANIGGTPAQLSVDENMEFQSSE
Ga0307476_103351311	3300031715	Hardwood Forest Soil	GRRQRPPYTYEVQTSSTGFRVVATRSGDDTSGTPAQLSVDETMEFQTSE
Ga0307476_104900971	3300031715	Hardwood Forest Soil	ELISTNYITVARQRPPFTYEVQTSGSGFRVIATRSGDDGSGTPAQLSVDENMEFRTSE
Ga0307475_112425162	3300031754	Hardwood Forest Soil	LDELISANYITVSRQRPPYTYEVQTSSSGFRVVATRSGDNASGTPAKLSVDENMEFQTSE
Ga0307478_103119211	3300031823	Hardwood Forest Soil	VSGNNISLRRQRPPYSYEIEISSSGFRVVATRTGNNAAGAPAQLSVDENMEFQQSE
Ga0307478_112317092	3300031823	Hardwood Forest Soil	LDELISSNYITMARQRPPYSYEVQTGSSGFRAVATRSGDAASGTPAEISVDENMEFSQQ
Ga0307479_111742273	3300031962	Hardwood Forest Soil	RPPYTYEVQTSSSGFRVVAIRSGDNTSGTPAQLSVDENMEFQTSE
Ga0335080_107156311	3300032828	Soil	VAHQRPPYSYDVEVSSGGFRVTATRSGDDASGTPAQLSVDENMQFETTQ
Ga0335073_101160253	3300033134	Soil	SLDELISSHSLSVSRQRPPYSYEIETSGSGFRVVATRSGDDTSGTPAQLSVDETMQLQTS
Ga0334854_045137_2_160	3300033829	Soil	YITIARQRLPYTYEVQTSASGFRVVATRSGDDASGTPAQLSVDENMDFQTSQ
Ga0371487_0305137_3_149	3300033982	Peat Soil	ARQRPPYSYEVETSSSGFRVVATRSGDDNSGTPAQLWIDENMEVQISQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055091

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences