Metagenome / Metatranscriptome Family F055075

Basic Information
Family ID	F055075
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	48 residues
Representative Sequence	MWKFVVVLLLTALAILVAQLVSDAPVIQTRVGAAMQMQTTYAYAGVRG
Number of Associated Samples	119
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.89 %
% of genes near scaffold ends (potentially truncated)	28.06 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Unclassified (52.518 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.827 % of family members)
Environment Ontology (ENVO)	Unclassified (34.532 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.007 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.21% β-sheet: 0.00% Coil/Unstructured: 40.79%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF01218	Coprogen_oxidas	51.80
PF00313	CSD	13.67
PF07886	BA14K	2.16
PF00033	Cytochrome_B	0.72
PF00118	Cpn60_TCP1	0.72
PF10399	UCR_Fe-S_N	0.72
PF13304	AAA_21	0.72
PF00733	Asn_synthase	0.72
PF08206	OB_RNB	0.72
PF02668	TauD	0.72
PF01850	PIN	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0408	Coproporphyrinogen-III oxidase HemH, oxygen-dependent	Coenzyme transport and metabolism [H]	51.80
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0557	Exoribonuclease R	Transcription [K]	0.72
COG1158	Transcription termination factor Rho	Transcription [K]	0.72
COG1278	Cold shock protein, CspA family	Transcription [K]	0.72
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.72
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG4776	Exoribonuclease II	Transcription [K]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.52 %
All Organisms	root	All Organisms	47.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.52 %
cellular organisms	root	All Organisms → cellular organisms	47.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.04 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.29 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.22 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.52 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	5.04 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1.44 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.52 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	5.04 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	1.44 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.52 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	5.04 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.44 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.52 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	5.04 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1.44 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1178443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1096	Open in IMG/M
2228664022\|INPgaii200_c1179465	Not Available	529	Open in IMG/M
3300000891\|JGI10214J12806_10429642	Not Available	626	Open in IMG/M
3300001139\|JGI10220J13317_11468850	Not Available	503	Open in IMG/M
3300004157\|Ga0062590_101937972	Not Available	609	Open in IMG/M
3300004479\|Ga0062595_100121367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1447	Open in IMG/M
3300004480\|Ga0062592_102378118	Not Available	531	Open in IMG/M
3300005103\|Ga0066813_1014336	Not Available	526	Open in IMG/M
3300005294\|Ga0065705_10091004	Not Available	530	Open in IMG/M
3300005328\|Ga0070676_10831178	Not Available	683	Open in IMG/M
3300005329\|Ga0070683_100836375	Not Available	883	Open in IMG/M
3300005332\|Ga0066388_101111997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1339	Open in IMG/M
3300005332\|Ga0066388_103404394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	812	Open in IMG/M
3300005332\|Ga0066388_103790227	Not Available	771	Open in IMG/M
3300005332\|Ga0066388_105421972	Not Available	646	Open in IMG/M
3300005334\|Ga0068869_100630981	Not Available	908	Open in IMG/M
3300005339\|Ga0070660_100896069	Not Available	748	Open in IMG/M
3300005343\|Ga0070687_100336952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	969	Open in IMG/M
3300005347\|Ga0070668_102076173	Not Available	524	Open in IMG/M
3300005354\|Ga0070675_101857603	Not Available	556	Open in IMG/M
3300005438\|Ga0070701_11309636	Not Available	518	Open in IMG/M
3300005441\|Ga0070700_101992638	Not Available	503	Open in IMG/M
3300005455\|Ga0070663_101487662	Not Available	602	Open in IMG/M
3300005459\|Ga0068867_100461253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1085	Open in IMG/M
3300005539\|Ga0068853_100789562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	909	Open in IMG/M
3300005549\|Ga0070704_100105101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2137	Open in IMG/M
3300005549\|Ga0070704_100144892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1860	Open in IMG/M
3300005614\|Ga0068856_100578935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1144	Open in IMG/M
3300005713\|Ga0066905_102042415	Not Available	532	Open in IMG/M
3300005718\|Ga0068866_11110968	Not Available	567	Open in IMG/M
3300005719\|Ga0068861_101243890	Not Available	722	Open in IMG/M
3300005764\|Ga0066903_102312374	Not Available	1038	Open in IMG/M
3300005844\|Ga0068862_102185145	Not Available	565	Open in IMG/M
3300006050\|Ga0075028_100748171	Not Available	592	Open in IMG/M
3300006175\|Ga0070712_100268748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1369	Open in IMG/M
3300006572\|Ga0074051_10003887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1641	Open in IMG/M
3300006871\|Ga0075434_100132233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2515	Open in IMG/M
3300006880\|Ga0075429_101714098	Not Available	546	Open in IMG/M
3300009053\|Ga0105095_10590652	Not Available	618	Open in IMG/M
3300009078\|Ga0105106_11000222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	594	Open in IMG/M
3300009091\|Ga0102851_12831062	Not Available	557	Open in IMG/M
3300009092\|Ga0105250_10126422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1053	Open in IMG/M
3300009094\|Ga0111539_11464553	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300009100\|Ga0075418_10986774	Not Available	911	Open in IMG/M
3300009147\|Ga0114129_10064880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	5097	Open in IMG/M
3300009156\|Ga0111538_11526350	Not Available	842	Open in IMG/M
3300009156\|Ga0111538_11709186	Not Available	793	Open in IMG/M
3300009156\|Ga0111538_12399832	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009165\|Ga0105102_10842480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300009553\|Ga0105249_11031519	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300009792\|Ga0126374_11890289	Not Available	502	Open in IMG/M
3300010358\|Ga0126370_10226506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1432	Open in IMG/M
3300010362\|Ga0126377_11839279	Not Available	681	Open in IMG/M
3300010371\|Ga0134125_12207073	Not Available	599	Open in IMG/M
3300010373\|Ga0134128_10546878	Not Available	1290	Open in IMG/M
3300010375\|Ga0105239_12350472	Not Available	621	Open in IMG/M
3300010375\|Ga0105239_13086232	Not Available	543	Open in IMG/M
3300010397\|Ga0134124_12709757	Not Available	539	Open in IMG/M
3300011119\|Ga0105246_10186540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1602	Open in IMG/M
3300011119\|Ga0105246_10698077	Not Available	889	Open in IMG/M
3300012507\|Ga0157342_1036553	Not Available	641	Open in IMG/M
3300012891\|Ga0157305_10010796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1456	Open in IMG/M
3300012913\|Ga0157298_10206082	Not Available	635	Open in IMG/M
3300012951\|Ga0164300_10067552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1473	Open in IMG/M
3300012951\|Ga0164300_10078113	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1396	Open in IMG/M
3300012951\|Ga0164300_10575112	Not Available	660	Open in IMG/M
3300012955\|Ga0164298_10000998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	8318	Open in IMG/M
3300012957\|Ga0164303_10020778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2525	Open in IMG/M
3300012957\|Ga0164303_11551627	Not Available	503	Open in IMG/M
3300012960\|Ga0164301_10234335	Not Available	1194	Open in IMG/M
3300012964\|Ga0153916_10377348	All Organisms → cellular organisms → Bacteria → Proteobacteria	1472	Open in IMG/M
3300012984\|Ga0164309_11500414	Not Available	577	Open in IMG/M
3300012987\|Ga0164307_10010599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4457	Open in IMG/M
3300014255\|Ga0075320_1132731	Not Available	515	Open in IMG/M
3300014302\|Ga0075310_1048888	Not Available	821	Open in IMG/M
3300014319\|Ga0075348_1126737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	661	Open in IMG/M
3300014326\|Ga0157380_13521680	Not Available	502	Open in IMG/M
3300014881\|Ga0180094_1075686	Not Available	750	Open in IMG/M
3300015371\|Ga0132258_11834876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1527	Open in IMG/M
3300015371\|Ga0132258_13067670	Not Available	1156	Open in IMG/M
3300015374\|Ga0132255_100834582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1375	Open in IMG/M
3300017965\|Ga0190266_10040432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1567	Open in IMG/M
3300017966\|Ga0187776_11096400	Not Available	591	Open in IMG/M
3300018027\|Ga0184605_10454525	Not Available	564	Open in IMG/M
3300018028\|Ga0184608_10139023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1040	Open in IMG/M
3300018076\|Ga0184609_10096644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1322	Open in IMG/M
3300018076\|Ga0184609_10248222	Not Available	832	Open in IMG/M
3300018081\|Ga0184625_10144305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1243	Open in IMG/M
3300018469\|Ga0190270_10096181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2252	Open in IMG/M
3300018469\|Ga0190270_10975666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	872	Open in IMG/M
3300018469\|Ga0190270_11146938	Not Available	813	Open in IMG/M
3300018481\|Ga0190271_10493433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1335	Open in IMG/M
3300019356\|Ga0173481_10332431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	719	Open in IMG/M
3300019361\|Ga0173482_10489588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	594	Open in IMG/M
3300021078\|Ga0210381_10190053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	713	Open in IMG/M
3300022694\|Ga0222623_10050208	Not Available	1604	Open in IMG/M
3300025313\|Ga0209431_11184166	Not Available	524	Open in IMG/M
3300025559\|Ga0210087_1062060	Not Available	745	Open in IMG/M
3300025899\|Ga0207642_10082934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1562	Open in IMG/M
3300025900\|Ga0207710_10013081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3495	Open in IMG/M
3300025907\|Ga0207645_10271292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1125	Open in IMG/M
3300025924\|Ga0207694_10485193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1034	Open in IMG/M
3300025926\|Ga0207659_11814454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	518	Open in IMG/M
3300025933\|Ga0207706_10602716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	943	Open in IMG/M
3300025941\|Ga0207711_12021595	Not Available	519	Open in IMG/M
3300025960\|Ga0207651_10439077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1118	Open in IMG/M
3300026041\|Ga0207639_11771477	Not Available	578	Open in IMG/M
3300026075\|Ga0207708_10545656	Not Available	977	Open in IMG/M
3300026118\|Ga0207675_100991155	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300027523\|Ga0208890_1000462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3737	Open in IMG/M
3300027560\|Ga0207981_1037752	Not Available	880	Open in IMG/M
3300027907\|Ga0207428_10374538	Not Available	1045	Open in IMG/M
3300027909\|Ga0209382_10271464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1920	Open in IMG/M
3300028592\|Ga0247822_11979149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	500	Open in IMG/M
3300028597\|Ga0247820_10410524	Not Available	908	Open in IMG/M
3300028608\|Ga0247819_10130476	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300028608\|Ga0247819_10741814	Not Available	603	Open in IMG/M
3300028802\|Ga0307503_10004678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3567	Open in IMG/M
3300028802\|Ga0307503_10629625	Not Available	595	Open in IMG/M
3300028809\|Ga0247824_10669472	Not Available	630	Open in IMG/M
3300028814\|Ga0307302_10490254	Not Available	610	Open in IMG/M
3300030006\|Ga0299907_11249558	Not Available	530	Open in IMG/M
3300031539\|Ga0307380_10014197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	9799	Open in IMG/M
3300031565\|Ga0307379_10329416	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300031566\|Ga0307378_11242837	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300031847\|Ga0310907_10239555	Not Available	887	Open in IMG/M
3300031854\|Ga0310904_10151256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1348	Open in IMG/M
3300031858\|Ga0310892_10198118	Not Available	1205	Open in IMG/M
3300031940\|Ga0310901_10036667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1533	Open in IMG/M
3300031949\|Ga0214473_10129523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2942	Open in IMG/M
3300031949\|Ga0214473_10417083	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300031949\|Ga0214473_10702177	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1103	Open in IMG/M
3300032012\|Ga0310902_10322329	Not Available	959	Open in IMG/M
3300032261\|Ga0306920_103300109	Not Available	602	Open in IMG/M
3300032516\|Ga0315273_13142349	Not Available	513	Open in IMG/M
3300033416\|Ga0316622_101864144	Not Available	700	Open in IMG/M
3300033433\|Ga0326726_11439926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	671	Open in IMG/M
3300033550\|Ga0247829_10879263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	746	Open in IMG/M
3300033551\|Ga0247830_10047603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2793	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.06%
Host-Associated	Host-Associated	30.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.55%
Plants	Host-Associated → Plants	30.94%
Aquatic	Environmental → Aquatic	11.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.07%
Sediment	Environmental → Aquatic → Sediment	5.76%
Freshwater	Environmental → Aquatic → Freshwater	5.04%
Marine	Environmental → Aquatic → Marine	0.72%
Peat	Environmental → Terrestrial → Peat	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.39%
Loam	Environmental → Terrestrial → Soil → Loam	10.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.88%
Clay	Environmental → Terrestrial → Soil → Clay	2.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.44%
Lake	Environmental → Aquatic → Freshwater → Lake	0.72%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.16%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.16%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.44%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.72%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.72%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.16%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.16%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.16%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.16%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.44%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.72%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.72%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.72%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014319	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_11784432	2228664022	Soil	MWKFVFILLVTALAVLVAQLIADAPVIQTRVGALGEMQVTYAFAGIRG
INPgaii200_11794652	2228664022	Soil	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYAYAGIRG
JGI10214J12806_104296421	3300000891	Soil	MWKFVVVLLLTAIAVLVAQLVSDAPVIQTRVGAANNVQITYAYAGIRG*
JGI10220J13317_114688502	3300001139	Soil	VVVLLLTAIAVLVAQLVSDAPVIQTRVGAANNVQITYAYAGIRG*
Ga0062590_1019379721	3300004157	Soil	MWKFVVVLLTAIAVLVAQLVSDAPVIQTRVGAANNVQITYAYAGIRG*
Ga0062595_1001213672	3300004479	Soil	MWKFVFILLVTALAVLVAQLIADAPVIQTRVGALGEMQVTYAFAGIRG*
Ga0062592_1023781181	3300004480	Soil	LLTAIAVLVAQLVSDAPVIQTRVGAANNVQITYAYAGIRG*
Ga0066813_10143362	3300005103	Soil	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAASQVQVTYAYAGVRG*
Ga0065705_100910041	3300005294	Switchgrass Rhizosphere	MWKFVFVLLVTALAVLIAQLIADAPVIQTRVGAAMETQTVYAYAGTRG*
Ga0070676_108311781	3300005328	Miscanthus Rhizosphere	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGATMQMQTTYAYAGV
Ga0070683_1008363751	3300005329	Corn Rhizosphere	MWKFVVVLLTAIAVLVAQLVSDAPVIQTRVGAANNVQITY
Ga0066388_1011119972	3300005332	Tropical Forest Soil	MWKFVRVLLKTEIAILIAQLVADAPVIQTRVGTLYPVQITHAFAGVRG*
Ga0066388_1034043942	3300005332	Tropical Forest Soil	MWKFVFVLLVTALELLAAQLIADAPVIQTRVGALHTVQVTYAGVRG*
Ga0066388_1037902272	3300005332	Tropical Forest Soil	MWKFVFVLLVTALVLLVAQLIADAPVIQTRVGAASQVQVTYAYAGVRG*
Ga0066388_1054219721	3300005332	Tropical Forest Soil	MWKFVLVLLLTAIAILIAQLVADAPVIQTRVGTLYPVQITYAFAGVRG*
Ga0068869_1006309812	3300005334	Miscanthus Rhizosphere	MWKFVLVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYAYAGVRG*
Ga0070660_1008960692	3300005339	Corn Rhizosphere	MWKFVLVLLVTALALLAAQLIADAPVIQTRVGAVSQVQVT
Ga0070687_1003369523	3300005343	Switchgrass Rhizosphere	MWKFVLVLLVTALALLAAQLIADAPVIQTRVGAVSQVQVTY
Ga0070668_1020761731	3300005347	Switchgrass Rhizosphere	MWKFVLVLLVTALALLAAQLIADAPVIQTRVGAAMETQTAYAYAGIRG*
Ga0070675_1018576031	3300005354	Miscanthus Rhizosphere	SASEAVMWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGATMQMQTTYAYAGVRG*
Ga0070701_113096361	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGATMQMQTTYAYAGVRG*
Ga0070700_1019926381	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MWKFVVVLLLTAIAILVAQLVSDAPVIQTRVGAAMQMQTTYAYAGVRG*
Ga0070663_1014876622	3300005455	Corn Rhizosphere	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYAYAGVRG*
Ga0068867_1004612532	3300005459	Miscanthus Rhizosphere	MWKFVLVLLVTALALLAAQLIADAPVIQTRVGAVSQVQVTYAYAGVRG*
Ga0068853_1007895622	3300005539	Corn Rhizosphere	MWKFVVVLLLTAIAILVAQLVSDAPVIQTRVGAANNVQITYAYAGIRG*
Ga0070704_1001051011	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGALGQVQVTYAYAGVRG*
Ga0070704_1001448921	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SEAVMWKFVLVLLVTALALLAAQLIADAPVIQTRVGAVSQVQVTYAYAGVRG*
Ga0068856_1005789352	3300005614	Corn Rhizosphere	MWKFVLVLLVTALALLAAQLIADAPVIQTRVGAVSQVQVTYAYAGIRG*
Ga0066905_1020424151	3300005713	Tropical Forest Soil	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAASQVLVTYAYLGVRG*
Ga0068866_111109682	3300005718	Miscanthus Rhizosphere	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYAY
Ga0068861_1012438901	3300005719	Switchgrass Rhizosphere	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGALHTVRVTYAYAGVRG*
Ga0066903_1023123742	3300005764	Tropical Forest Soil	MWKFVLLLLLTAIAILIAQLVADAPVIQTRVGTLHPVKITYAYAGVRG*
Ga0068862_1021851452	3300005844	Switchgrass Rhizosphere	AVMWKFVLVLLVTALALLAAQLIADAPVIQTRVGAVSQVQVTYAYAGIRG*
Ga0075028_1007481711	3300006050	Watersheds	MWKFVLVLLITATAILIAQLVADAPVIQAGVGAASQRQIQVTYAYGGVRG*
Ga0070712_1002687482	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MWKFVLVLLITATAILIAQLVADAPVIQAGVGVASQRQIQVTYAYGGVRG*
Ga0074051_100038874	3300006572	Soil	MWKFVFVLLVTALALLAAQLIADAPVIQTRVGAAMETQIVYAYAGTRG*
Ga0075434_1001322332	3300006871	Populus Rhizosphere	MWKFVFTLLVTALAVLVAQLIADAPVIQTRVGALGEMQVTYAFAGIRG*
Ga0075429_1017140982	3300006880	Populus Rhizosphere	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAANAAQVIYAYAGIRG*
Ga0105095_105906522	3300009053	Freshwater Sediment	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAGGNVQTTYAYAGVRG*
Ga0105106_110002222	3300009078	Freshwater Sediment	MLKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAGGNVQTTYAYAGVRG*
Ga0102851_128310622	3300009091	Freshwater Wetlands	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYAYAGIRG*
Ga0105250_101264223	3300009092	Switchgrass Rhizosphere	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAANAAQVAYAYA
Ga0111539_114645531	3300009094	Populus Rhizosphere	MWKFVVVLLTAIDVLVAQLVSDAPVIQTRVGAANNVQITYAYAGIRG*
Ga0075418_109867741	3300009100	Populus Rhizosphere	MLKYVVVLLLTAFAILVAQLVSDAPVIQTRVGAAMQMQTTYAYAGVRG*
Ga0114129_100648804	3300009147	Populus Rhizosphere	MLKYVVVLLLTAFAILVAQLVSDAPVIQTRVGASAQMQTTYAYAGVRG*
Ga0111538_115263501	3300009156	Populus Rhizosphere	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAMHTVQVTYAYAG*
Ga0111538_117091862	3300009156	Populus Rhizosphere	MWKLVFVLLLTAFAILVAQLVSDAPVIQTRVGASAQMQTTYAYAGVRG*
Ga0111538_123998322	3300009156	Populus Rhizosphere	SEAVMWKFVVVLLLTAFAILVAELVSDALVIQTRVGAANAAQVIYAYAGIRG*
Ga0105102_108424801	3300009165	Freshwater Sediment	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRIGAANAAQVMYAYAGIRG*
Ga0105249_110315191	3300009553	Switchgrass Rhizosphere	VMWKFVFVLLVTALAVLIAQLIADAPVIQTRVGAAMETQTVYAYAGIRG*
Ga0126374_118902891	3300009792	Tropical Forest Soil	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAASQEVTYAYAGVRG*
Ga0126370_102265061	3300010358	Tropical Forest Soil	MWKFVLVLLLTEITILIAQLVADAPVIQTRVGTLYPVQITHAFAGVRG*
Ga0126377_118392792	3300010362	Tropical Forest Soil	SEAAMWKFVRVLLKTEIAILIAQLVADAPVIQTRVGTLYPVQITYAFAGVRG*
Ga0134125_122070731	3300010371	Terrestrial Soil	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGATMQMQTTYAYAGCGGKRKIP
Ga0134128_105468782	3300010373	Terrestrial Soil	AVMWKFVFVLLVTALTLLVAQLIADAPVIQTRVGAVSQVQVTYAYAGVRG*
Ga0105239_123504721	3300010375	Corn Rhizosphere	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAANAAQVAYAYAGIRG*
Ga0105239_130862322	3300010375	Corn Rhizosphere	LVTALALLAAQLIADAPVIQTRVGAVSQVQVTYAYAGVRG*
Ga0134124_127097571	3300010397	Terrestrial Soil	MWKFVLVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYAYAGIRG*
Ga0105246_101865404	3300011119	Miscanthus Rhizosphere	MWKFVVVLLLTAIAILVAQLVSDAPVIQTRVGAAMHMQTTYAYAGVRG*
Ga0105246_106980771	3300011119	Miscanthus Rhizosphere	MWKFVVVLLLTAFAILFAQLVSDAPVIQTRVGAANAAQVAYAYAGIRG*
Ga0157342_10365532	3300012507	Arabidopsis Rhizosphere	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAMHTVQVTYAYAGVRG*
Ga0157305_100107964	3300012891	Soil	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGASAQMQTTYAYAGVRG*
Ga0157298_102060822	3300012913	Soil	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGATMQMQTTYAYAGCGGKRKIPHAEERP*
Ga0164300_100675524	3300012951	Soil	MWKFVLVLLVTALALLAAQLIADAPVIQTRVGAVSQVQVTYAYAGSRG*
Ga0164300_100781131	3300012951	Soil	MWKFVLVLLITATAILIAQLVADAPVIQAGVGAASQRQIQVTYAYAGVSG*
Ga0164300_105751121	3300012951	Soil	MWKFVLVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYAYAYAGVRG*
Ga0164298_100009988	3300012955	Soil	MWKFVLVLFITAIAILIARLVADAPVIQTGVGAASQRQIQVTYAYAGVSG*
Ga0164303_100207783	3300012957	Soil	MWKFVLVLFITAIAILIARLVADAPVIQTGVGASSQRQIQVTYAYAGVSG*
Ga0164303_115516271	3300012957	Soil	MWKFVLVLLITAIAILIAQLVADVPVIQTRVGAASPMQMQVTYAYGDVRG*
Ga0164301_102343352	3300012960	Soil	MWKFVLVLLITATAILIAQLLADAPVIQAGVGAASQRQIQVTYAYGGVRG*
Ga0153916_103773481	3300012964	Freshwater Wetlands	MWKFVFVLLVTALALLVAQLIADAPVIQARVGALSQVQVTYAYAGIRG
Ga0164309_115004141	3300012984	Soil	MWKFVLVLLLTAIAILIAQLVADVPVIQTRVGAASPMQMQVTHAYGDVRG*
Ga0164307_100105993	3300012987	Soil	MWKFVLVLFITAIAILIAQLIADAPVIQTGVGAASQRQIQVTYAYAGVRG*
Ga0075320_11327311	3300014255	Natural And Restored Wetlands	MWKFVFVLLVTALALLAAQLIADAPVIQTRVGALHAVQVTYAYAGI
Ga0075310_10488882	3300014302	Natural And Restored Wetlands	MWKFVVVLLLTAFAVLVAQLVSDAPVIQTRVGAAAQMQTTYAYAGVRG*
Ga0075348_11267372	3300014319	Natural And Restored Wetlands	MLKFVLVLLLTAFAILVAQLVSDAPVIQTRVGAAAQMQTTYAYAGVRG*
Ga0157380_135216802	3300014326	Switchgrass Rhizosphere	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAAMQMQTTYAYAGVRG*
Ga0180094_10756862	3300014881	Soil	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAAKQMQTTYAYAGVRG*
Ga0132258_118348761	3300015371	Arabidopsis Rhizosphere	MWKFVVVLLLTAIAILVAQLVSDAPVIQTRVGAAMQMQTT
Ga0132258_130676702	3300015371	Arabidopsis Rhizosphere	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAAMQMQTTYAYAGVRG*
Ga0132255_1008345822	3300015374	Arabidopsis Rhizosphere	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYAYAGGRG*
Ga0190266_100404321	3300017965	Soil	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAGGKMQTTYAYAGGRG
Ga0187776_110964002	3300017966	Tropical Peatland	MWKFVLLLLLTAIAILIAQLVADAPVIQTRVGTLYPVQITHAFAGVRG
Ga0184605_104545251	3300018027	Groundwater Sediment	MLKFVLVLLVTALAVLIAQLIADAPVIQTRVGAAGTVQVTYAYAGIRG
Ga0184608_101390232	3300018028	Groundwater Sediment	MWKFVFVLLVTALAVLIAQLIADAPVIQTRVGAAGTVQVTYAYAGIRG
Ga0184609_100966443	3300018076	Groundwater Sediment	MWKFVFVLLVTALAVLIAQLIADAPVIQTRVGAAMETQTVYAYAGTREGRS
Ga0184609_102482221	3300018076	Groundwater Sediment	PCPSEAVMLKFVLVLLVTALAVLIAQLIADAPVIQTRVGAAGTVQVT
Ga0184625_101443052	3300018081	Groundwater Sediment	MWKFVLVLLVTALAVLIAQLISDAPVIQTRVGAAGTVQVTYAYAGIRG
Ga0190270_100961812	3300018469	Soil	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAAGKVQITYAYAGVRG
Ga0190270_109756662	3300018469	Soil	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAANAAQVAYAYAGIRG
Ga0190270_111469382	3300018469	Soil	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGASAQMQTTYAYAGVRG
Ga0190271_104934333	3300018481	Soil	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAANAAQVIYAYAGI
Ga0173481_103324312	3300019356	Soil	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGATMQMQTTYAYAGVRG
Ga0173482_104895881	3300019361	Soil	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGATMQMQPPTPMRGCGGKRKIPHAEERP
Ga0210381_101900532	3300021078	Groundwater Sediment	MWKFVLVLLVTALAVLIAQLIADAPVIQTRVGAAMEAQTAYA
Ga0222623_100502082	3300022694	Groundwater Sediment	MWKFVLVLLVTALAVLIAQLIADAPVIQTRVGAAGTVQVTYAYAGIRG
Ga0209431_111841661	3300025313	Soil	MWKFVVVLLLTALAILVAQLVSDAPVIQTRVGAAMQMQTTYAYAGVRG
Ga0210087_10620602	3300025559	Natural And Restored Wetlands	MWKFVVVMLLTAFAILVAQLVSDAPVIQTRVGAAAQMQTTYAYAGVRG
Ga0207642_100829343	3300025899	Miscanthus Rhizosphere	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYAYAGVRG
Ga0207710_100130812	3300025900	Switchgrass Rhizosphere	MWKFVLVLLVTALALLAAQLIADAPVIQTRVGAVSQVQVTYAYAGVRG
Ga0207645_102712923	3300025907	Miscanthus Rhizosphere	MWKFVVVLLLTAIAVLVAQLVSDAPVIQTRVGAANNVQIT
Ga0207694_104851933	3300025924	Corn Rhizosphere	MWKFVLVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYAYAGVRG
Ga0207659_118144541	3300025926	Miscanthus Rhizosphere	SSASEAVMWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGATMQMQTTYAYAGVRG
Ga0207706_106027162	3300025933	Corn Rhizosphere	MWKFVVVLLLTAIAVLVAQLVSDAPVIQTRVGAANNVQITYAYAGIRG
Ga0207711_120215952	3300025941	Switchgrass Rhizosphere	VMWKFVLVLLVTALALLAAQLIADAPVIQTRVGAVSQVQVTYAYAGIRG
Ga0207651_104390773	3300025960	Switchgrass Rhizosphere	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGATMQMQTTYAY
Ga0207639_117714771	3300026041	Corn Rhizosphere	WKFVLVLLVTALALLAAQLIADAPVIQTRVGAVSQVQVTYAYAGVRG
Ga0207708_105456561	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MWKFVVVLLLTAIAILVAQLVSDAPVIQTRVGAAMQMQTTYAYAGVRG
Ga0207675_1009911551	3300026118	Switchgrass Rhizosphere	PRPCPSEAVMWKFVFVLLVTALAVLIAQLIADAPVIQTRVGAAMETQTVYAYAGIRG
Ga0208890_10004626	3300027523	Soil	MWKFVFVLLVTALAVLIAQLIADAPVIQTRVGAAMETQTAYAYAGIRG
Ga0207981_10377522	3300027560	Soil	MWKFVFVLLVTALAVLIAQLIADAPVIQTRVGAAMETQIVYAYAGTRG
Ga0207428_103745381	3300027907	Populus Rhizosphere	LVTALAVLVAQLIADAPVIQTRVGALGEMQVTYAFAGIRG
Ga0209382_102714642	3300027909	Populus Rhizosphere	MLKYVVVLLLTAFAILVAQLVSDAPVIQTRVGASAQMQTTYAYAGVRG
Ga0247822_119791491	3300028592	Soil	SPSEAVMWKFVVVLLLTAIAVLVAQLVSDAPVIQTRVGAANNVQITYAYAGIRG
Ga0247820_104105241	3300028597	Soil	MWKFVFVLLVTALAVLIAQLIADAPVIQTRVGAAMETQTVYAYAGTRG
Ga0247819_101304763	3300028608	Soil	MWKFVFVLLVTALAVLIAQLIADAPVIQTRVGAAMETQTVYAYAGIRG
Ga0247819_107418142	3300028608	Soil	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGATMQMQTTYAYAG
Ga0307503_100046781	3300028802	Soil	VVVLLLTAFAILVAQLVSDAPVIQTRVGAVGQMQMTYAYAGVRG
Ga0307503_106296252	3300028802	Soil	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAVGQMQMTYAYAGVEG
Ga0247824_106694721	3300028809	Soil	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAVSQVQVTYASAGIRG
Ga0307302_104902541	3300028814	Soil	MWKFVLVLLVTALAVLIAQLIADAPVIQTRVGAVGQVQVTYAYAGIRG
Ga0299907_112495582	3300030006	Soil	MWKFVFVLLVTALAVLIAQLIADAPVIQTRVGAGGKMQTTYAYAGVRG
Ga0307380_100141976	3300031539	Soil	MWKFVLILLTTALAVLVAQLIADAPVIQTRVGVTIEAPALAYAGVRG
Ga0307379_103294161	3300031565	Soil	WKFVLILLTTALAVLVAQLIADAPVIQTRVGVTVETPVLAYAGVRG
Ga0307378_112428371	3300031566	Soil	MWKFVLILLTTALAVLVAQLIADAPVIQTRVGLTIEAPALAYAGVRG
Ga0310907_102395552	3300031847	Soil	PSEAVMWKFVVVLLLTAIAVLVAQLVSDAPVIQTRVGAANNVQITYAYAGIRG
Ga0310904_101512561	3300031854	Soil	MWKFVVVLLLTAFAILAAQLVSDAPVIQTRVGAATQMQTTYAYA
Ga0310892_101981181	3300031858	Soil	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGAATQMQTTYAYAGVRG
Ga0310901_100366671	3300031940	Soil	MWKFVVVLLLTAIAILVAQLVSDAPVIQTRVGAAMQMQTTYAY
Ga0214473_101295234	3300031949	Soil	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAAMQMQTTYAYAGVRG
Ga0214473_104170832	3300031949	Soil	MWKFVVVLLLTAFAILVAQLVSDAPVIQTRVGAASQMQTAYAYAGVRG
Ga0214473_107021771	3300031949	Soil	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGAAMQMQTAYAYAGVRG
Ga0310902_103223292	3300032012	Soil	MWKFVVVLLLTAIAILVAQLVSDAPVIQTRVGAANNVQITYAYAGIRG
Ga0306920_1033001091	3300032261	Soil	MWKFVRVLLKTEIAILIAQLVADAPVIQTRVGTYPVQITHAFAGVRG
Ga0315273_131423492	3300032516	Sediment	MWKFVVMLLLTAFAILVAQLVSDAPVIQTRVGAAPQMQTTYAYAGVRG
Ga0316622_1018641442	3300033416	Soil	MWKFVFVLLVTALALLAAQLIADAPVIQTRVGAASQAQVTYAYAGIRG
Ga0326726_114399262	3300033433	Peat Soil	MWKFVFVLLVTALALLVAQLIADAPVIQTRVGAASQVQVTYAYAGVRG
Ga0247829_108792632	3300033550	Soil	MWKFVVLLLLTAFAMLVAQLVSDAPLIQTRVGAPSKVQPTYAYAGVRG
Ga0247830_100476032	3300033551	Soil	MWKFVVLLLLTAFAMLVAQLVSDAPVIQTRVGAPSKVQPTYAYAGVRG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055075

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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