NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F054973

Metagenome Family F054973

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F054973
Family Type Metagenome
Number of Sequences 139
Average Sequence Length 45 residues
Representative Sequence MHTPYFPAFRSRLAALGRRTAGTLRQATLEQLQQHLRDLLPAPLL
Number of Associated Samples 131
Number of Associated Scaffolds 139

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 55.40 %
% of genes near scaffold ends (potentially truncated) 98.56 %
% of genes from short scaffolds (< 2000 bps) 94.96 %
Associated GOLD sequencing projects 130
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (82.734 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog
(11.511 % of family members)
Environment Ontology (ENVO) Unclassified
(20.863 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(30.216 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.
1JGIcombinedJ13530_1037021231
2JGI12712J15308_100425361
3JGIcombinedJ26865_10754682
4Ga0066599_1010151371
5Ga0070697_1017007932
6Ga0066661_104128912
7Ga0070762_112184182
8Ga0070764_107265902
9Ga0074473_101644572
10Ga0075274_10629921
11Ga0066651_105604391
12Ga0075023_1002356193
13Ga0075015_1005891912
14Ga0079037_1015619751
15Ga0099794_108069232
16Ga0066709_1040861951
17Ga0113563_127599411
18Ga0116229_112814722
19Ga0116222_10403392
20Ga0116218_14746531
21Ga0116107_10289191
22Ga0116133_11437371
23Ga0116122_10777983
24Ga0116121_11040551
25Ga0116227_114126341
26Ga0116130_11492361
27Ga0134071_105492782
28Ga0126377_118532182
29Ga0137457_12897471
30Ga0137389_117785072
31Ga0137357_10959153
32Ga0137365_101021003
33Ga0137362_109661071
34Ga0137370_105990981
35Ga0137367_104282842
36Ga0137360_115549102
37Ga0137358_109446492
38Ga0137398_109379962
39Ga0137416_118354201
40Ga0172369_104142142
41Ga0181521_104263421
42Ga0181528_101788964
43Ga0181531_109497472
44Ga0181535_100720113
45Ga0182019_103598793
46Ga0182021_134030132
47Ga0180087_10878113
48Ga0137405_12119631
49Ga0182040_117144581
50Ga0187854_102519481
51Ga0187782_113784361
52Ga0181520_109684142
53Ga0187860_13524812
54Ga0187866_11097761
55Ga0187864_103576652
56Ga0187881_104176111
57Ga0187862_104141323
58Ga0187887_105613802
59Ga0187890_105683881
60Ga0184639_105138101
61Ga0187894_102311623
62Ga0193697_11183581
63Ga0163151_105497151
64Ga0163150_104713791
65Ga0179596_106550632
66Ga0210388_116009952
67Ga0210393_113959731
68Ga0210385_112907621
69Ga0210394_109836012
70Ga0210394_115739702
71Ga0222713_107661041
72Ga0224537_10174882
73Ga0208193_10800691
74Ga0208188_11315012
75Ga0208716_10736682
76Ga0208507_11307263
77Ga0208828_11174291
78Ga0208872_11947381
79Ga0209124_101236053
80Ga0207674_121054322
81Ga0207759_1192302
82Ga0207758_10269262
83Ga0209514_101775713
84Ga0209611_105105742
85Ga0209488_109919992
86Ga0302144_101725193
87Ga0302156_102441053
88Ga0302266_103384411
89Ga0307504_104102341
90Ga0302197_102002091
91Ga0311361_100025601
92Ga0311361_100998775
93Ga0311361_112197732
94Ga0311358_102522443
95Ga0311358_104127123
96Ga0311363_107728603
97Ga0311343_110638451
98Ga0302150_103913481
99Ga0311336_108801922
100Ga0311336_117009551
101Ga0302276_102185982
102Ga0302186_102988262
103Ga0311349_116926191
104Ga0311349_118414002
105Ga0311360_112499441
106Ga0302046_110904011
107Ga0311335_112318952
108Ga0302323_1007996073
109Ga0302318_100425574
110Ga0302326_129943781
111Ga0247727_103166103
112Ga0310686_1108277842
113Ga0310686_1183031163
114Ga0315288_110627161
115Ga0302319_1000727720
116Ga0307473_112376942
117Ga0315290_113797842
118Ga0315297_113902901
119Ga0306919_101701583
120Ga0318520_109197742
121Ga0302322_1014791703
122Ga0315278_120413191
123Ga0318545_103551982
124Ga0306924_114461141
125Ga0315277_114025101
126Ga0315292_109736603
127Ga0315281_122810172
128Ga0315287_121100592
129Ga0315275_103567531
130Ga0315275_125070401
131Ga0315273_112529703
132Ga0316622_1015248251
133Ga0316620_117874561
134Ga0316629_103612172
135Ga0316624_120766792
136Ga0316621_105223941
137Ga0334810_133382_483_596
138Ga0370502_0218475_479_607
139Ga0370506_083360_1_111
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.21%    β-sheet: 0.00%    Coil/Unstructured: 54.79%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045MHTPYFPAFRSRLAALGRRTAGTLRQATLEQLQQHLRDLLPAPLLSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
82.7%17.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater
Freshwater
Freshwater Microbial Mat
Sediment
Peatland
Bog
Peatland
Freshwater Wetlands
Groundwater
Freshwater
Wetland
Estuarine Water
Soil
Sediment (Intertidal)
Groundwater Sediment
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Peatlands Soil
Arctic Peat Soil
Soil
Grasslands Soil
Soil
Soil
Hardwood Forest Soil
Soil
Untreated Peat Soil
Rice Paddy Soil
Tropical Peatland
Fen
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Fen
Palsa
Bog
Microbial Mat On Rocks
Biofilm
Corn Rhizosphere
Host-Associated
7.9%5.8%3.6%5.0%3.6%9.4%5.0%3.6%5.8%11.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_10370212313300001213WetlandMHTPFFPALRCRLAALGRRTTTSLRQSTLAQLQQQLREFLPPPL
JGI12712J15308_1004253613300001471Forest SoilMETPYFPQFRSRLAALGHRTHSMRQATLVQLQERLRDFLPAPLLS
JGIcombinedJ26865_107546823300002347Arctic Peat SoilMHTPYFPCLRSRLAPLGRRTTPNLRQTTLAQLQQHLRDFLPAPLL
Ga0066599_10101513713300004282FreshwaterMTPYFPALRSRLAALGRRTAQTVRQTTLAQLQEQLRDLLPAPLLS
Ga0070697_10170079323300005536Corn, Switchgrass And Miscanthus RhizosphereMHTPYFPALRSRVAALGRRTARTIRQATLDQLQEHLRDLLPAPLLSA
Ga0066661_1041289123300005554SoilMHTPYFPTLRSRLAALGRRTAHHTQQTTLVQLQQQLGDFLPPPLLCPQ
Ga0070762_1121841823300005602SoilMTTPYFPVFRSRLAALGRRTARTLRQTTLAQLQQHLR
Ga0070764_1072659023300005712SoilMNTPFFPEFRSRLAALGRRTTQTLRQTTLAQLQRHLSDFIPAPLLSAEDEGPNS
Ga0074473_1016445723300005830Sediment (Intertidal)MNTPFFPHWRSRLAALGRRTLRTVRQATLAQLQEHLRDFLPAPLLS
Ga0075274_106299213300005901Rice Paddy SoilMETPYFPCLRSRLAALGRRSAQTLRQATLTQLQEHLRELLPPPLLSATDEGPN
Ga0066651_1056043913300006031SoilMLHTPYFPTLRSRLAALGRRTAQTLRQTTLSQLQEHLRDLLPVPLLC
Ga0075023_10023561933300006041WatershedsMSTPFFPAFRSRLAALGRRTAHAIRQATLAQLQQHLGDYL
Ga0075015_10058919123300006102WatershedsMSTPFFPTFRSRLAALGRRTAHALGQATLVQLQQHLGDYLPAGLLSAEEEGAHS
Ga0079037_10156197513300006224Freshwater WetlandsMETPFFPALRARLAAYGRRSLQTVRQWTLAQLGQQLHDLL
Ga0099794_1080692323300007265Vadose Zone SoilMHTPYFPALRSGLAALGRRTAHALRQATLGQLQEHLR
Ga0066709_10408619513300009137Grasslands SoilMLTPYFPALRSRLAALGRRTAHSLRQATLGQLQEHLRDLLPAPLFSAEDQ
Ga0113563_1275994113300009167Freshwater WetlandsMHTPFFPVFRARFAALGRRTASPLRQNTLQQLAQHLA
Ga0116229_1128147223300009500Host-AssociatedMHTPFFPAFRPRLAALGRRTAQTLRQTTLAQLQHHLRDFLPPPLLA
Ga0116222_104033923300009521Peatlands SoilMHTPCFPAFRSRLAALGRRTTPNLRQTTLAQLQQHLRDFLPAPLLGRGGRPQQP*
Ga0116218_147465313300009522Peatlands SoilMPTPYFPAFRSRLAALGRRTVQGLRQATLAQLQQHLRDFLPAPLLAAE
Ga0116107_102891913300009548PeatlandMHTPYFPTFRCRLAALGRRTTHSVRQATLAQLEEHLRDFLPAPL
Ga0116133_114373713300009623PeatlandMHTPFFPAFRSRLAALGRRTAHTLRQATLTQLQQHLRDVLSPP
Ga0116122_107779833300009639PeatlandMHTPYFSILRSRLAALGRRTARVIRQATLAQLQEQLRDFLPAPLLSAED
Ga0116121_110405513300009644PeatlandMHTPLFPAFRPRLAALGRRTAHTLRQATLTQLQEHLRNLLPAPLALGYR*
Ga0116227_1141263413300009709Host-AssociatedMNTPCFPAFRSRLAALGRHTTQTVRQTTLAQLQQHLRDFL
Ga0116130_114923613300009762PeatlandMPTPYFPAIRSRLAALGRRTVHGLRQATLAQLQEHLRDF
Ga0134071_1054927823300010336Grasslands SoilMQTPYFPSFRSRLAALGRRAAQTIRQATLNQLQEHLRNLLPVPLLSATDEGP
Ga0126377_1185321823300010362Tropical Forest SoilMNTPNTPYFPALRSRLAALGRRTAQHLRQTTMAQLQYHLHDLLPAPLLCSEDQ
Ga0137457_128974713300011443SoilMNTPCFPHWRSRLAALGRRTTQTVRQTTLTQLQQHLRDFLPAP
Ga0137389_1177850723300012096Vadose Zone SoilMHTPYFPALRSRLAALGRRTAQTVRQTTVAQLQAHLRD
Ga0137357_109591533300012168SoilMNTSFFPPWRGRLAALGRRTTHALRQTTMAQLQQHLRDFLPAPLLST
Ga0137365_1010210033300012201Vadose Zone SoilMDTPYFCAFRSRLAALGRRTAQTIRQATLGQLQEHLAHLLPAPLLSATDEG
Ga0137362_1096610713300012205Vadose Zone SoilMHTPYFPALRSGLAALGRRTAHALRQATLGQLQEHLRHLLPAPLLSATD
Ga0137370_1059909813300012285Vadose Zone SoilMQTPYFPTFRSRLAALGRRTAGSLRQATLAQLQQHL
Ga0137367_1042828423300012353Vadose Zone SoilMHTPYFPALRSRLAALGRRTAHSLRQTTLAQLQEYLRD
Ga0137360_1155491023300012361Vadose Zone SoilMRDTPFFPAFRCRLAALGRRSFQPLRQNTLAQFQEQMRNLIPAHLLSQE
Ga0137358_1094464923300012582Vadose Zone SoilMHTPYFPSLHCRLAALGRRTAKTVRQATLAQLQHNLRQLLPAPLLSAEDEG
Ga0137398_1093799623300012683Vadose Zone SoilMQTLYFPSLRSRLAALGRRTAGSIRQGTLSQLQEHLR
Ga0137416_1183542013300012927Vadose Zone SoilMPTPYFPAFRSRLAPLGRRTVQTLRQTTLAQLQQHLRDFLPPPLLAAE
(restricted) Ga0172369_1041421423300013125FreshwaterMHTPFLPAFRSRLAALGRRAAATLRQATLGQLQDQLRDLLPA
Ga0181521_1042634213300014158BogMPTPFFPAFRSRLAALGRRTVHSLRQATLAQLQEHLRDFLPAPLLAAQDNGPNSRQ
Ga0181528_1017889643300014167BogMVVVTPFFPGLRSRLAALGRRTAHPLRQTTLVQLQ
Ga0181531_1094974723300014169BogMNTPVFPAFRSRLAALGRRTVQLRQATLGQLQEHLRDFLPAQL
Ga0181535_1007201133300014199BogMDTPFFPPWRSRLAALGRRTAHALRQTTLSQLQQHLRDVLPAPLLSATDQGPN
Ga0182019_1035987933300014498FenMHTPYFPAFRSRLAALGRRTAGTLRQATLEQLQQH
Ga0182021_1340301323300014502FenMHTPLFPAFRSRLAALGRRTARTLRQATLAQLQEHLRNL
Ga0180087_108781133300014872SoilMLTPYFPALRSRLAALGRRTTQTVRQATLAQLQEHLRDLL
Ga0137405_121196313300015053Vadose Zone SoilMHTPYLPAFRSRLAALGRRTVHSVRQATLAQLQQHLRDLLPDPLLSSEDEGCSHPKMK
Ga0182040_1171445813300016387SoilMSHTPYFPAFRSRLAAQGRRTAHSVRQATLGQLQAHFRQLLPAPLLSSEE
Ga0187854_1025194813300017938PeatlandMKRYIYRPMPTPYFPAIRSRLAALGRRTVHGLRQATLAQLQEHLRDFLPAP
Ga0187782_1137843613300017975Tropical PeatlandMHTPCFPALRSRLAALGRRTAQKLRDYTLDQLDDCL
Ga0181520_1096841423300017988BogMSTTPFFPAFRSRLASLGRGVSRTLPRLRQCTLSQIEA
Ga0187860_135248123300018014PeatlandMHTPYFSILRSRLAALGRRTARVIRQATLAQLQEQLRDFLPAPLL
Ga0187866_110977613300018015PeatlandMPTPFFPAFRSRLAALGRRTVHSLRQATLAQLQEHLRDFLPAPLLAAQDNGPN
Ga0187864_1035766523300018022PeatlandMPTPYFPCLRSRLAPLGRRTTQRLRQTTLAQLQQHLRDFLPAPLLSAEEDGPNSR
Ga0187881_1041761113300018024PeatlandMPTPFFPAFRSRLAALGRRTVHSLRQATPAQLQEHLR
Ga0187862_1041413233300018040PeatlandMHTPYFSILRSRLAALGRRTARVIRQATLAQLQEQLRDFLPAPLLSAEDQGPNSR
Ga0187887_1056138023300018043PeatlandMHTPLFPAFRPRLAALGRRTAHTLRQATLTQLQEHLRN
Ga0187890_1056838813300018044PeatlandMHTPCFPCWRSRLAALGRRTTQNLRQTTLAQLQQHLRDFLPAPLLS
Ga0184639_1051381013300018082Groundwater SedimentMLTPYFPALRSRLAALGRRAAQTVLQTTLAQLQEHLRDLLPAPLL
Ga0187894_1023116233300019360Microbial Mat On RocksMHTPFLPAFRSRLAALGRRTVHSLRQATLGQLQDRIRDLLPAPLLASQEAGPNSR
Ga0193697_111835813300020005SoilMHTAYFPALRSRLAAMGRRTAQTVRQATLRQLQEHLRDFLPAPLLSSEDEGLNS
Ga0163151_1054971513300020057Freshwater Microbial MatMNTPFFPRWRGRLAALGRRSAHPLRQTTLAQLQQHLRDFLPAPLLSSEDEG
Ga0163150_1047137913300020195Freshwater Microbial MatMNTPFFPRWRGRLAALGRRSAHPLRQTTLAQLQQHLRDFLPAPLLSSEDEGLN
Ga0179596_1065506323300021086Vadose Zone SoilMQTPYFPSFRSRLAALGRRTAHHLRQVTLGQLQDHLRDLLPVPLLS
Ga0210388_1160099523300021181SoilMRTPYFPALRSRLAAYGRRTATALRQSTLAQLQQQLRDFLPAPLL
Ga0210393_1139597313300021401SoilMTTPYFPVFRSRLAALGRRTARTLRQTTLAQLQQHLRDFLPPPLLSAED
Ga0210385_1129076213300021402SoilMNTPFFPEFRPRLAALGRRTTQTLRQTTLAQLQRHLSDFIPPPFLSPETE
Ga0210394_1098360123300021420SoilMTTPYFPAFRSRLAALGRRTARTLRQTTLAQLQQHLRDFLPPPLLPAEP
Ga0210394_1157397023300021420SoilMHTPYFPSLRSRLAPLGRRAAHTVRQGTLAQLQQHLRDFLPAPLLAAEQDG
Ga0222713_1076610413300021962Estuarine WaterMHTPFFPAFRARLAALGRRTTTHLRQATLQQLGAHLAGL
Ga0224537_101748823300022835SoilMKTPYFPCWRSRLAPLGRRTAPVRQTTLAQLQEHLRDFLPAPL
Ga0208193_108006913300025463PeatlandMHTPYFPALRSRLAAWGRRTGAAVRQTTLAQLQTHLHDLLPPPLLAAA
Ga0208188_113150123300025507PeatlandMKRYIYRPMPTPYFPAIRSRLAALGRRTVHGLRQATLAQLQEHLRDFLPAPLL
Ga0208716_107366823300025548Arctic Peat SoilMHTPCFPAFRARLAALGRRTTPNLRQTTLAQLQQHLRDFLPAPLLSSE
Ga0208507_113072633300025648FreshwaterMHTPWFPAFRSRLAALGGRTAQTLRQTTLVQLQEHLRDFLPPHLLS
Ga0208828_111742913300025807FreshwaterMTTPYFPALRPRLAALGRRTAQTVRQTTLAQLQEHL
Ga0208872_119473813300025838FreshwaterMHTPCFPAFRSRLAALGRHTAQTLRQTPLAQLQQQLRDF
Ga0209124_1012360533300025852Arctic Peat SoilMHTPCFPAFRARLAALGRRTTPNLRQTTLAQLQQHLRDFL
Ga0207674_1210543223300026116Corn RhizosphereMLTTPYFPTLRSRLAALGRRTAQALRQTTLNQLQE
Ga0207759_11923023300026823Tropical Forest SoilMQTPYFPNFRCRLAALGRRTAQRLRQATLAQVQQHLCDLL
Ga0207758_102692623300026895Tropical Forest SoilMQTPYFPNFRCRLAALGRRTAQRLRQATLAQVQQHLCDLLPTPLLSSEDEGL
Ga0209514_1017757133300027819GroundwaterMHTPFFPAFRSRLAALGRRTTHPLRQTTLAQLQEHLRDFLPAPLLAA
Ga0209611_1051057423300027860Host-AssociatedMHTPFFPAFRPRLAALGRRTAQTLRQTTLAQLQHHLRDFLPPPLLAAEDEGPNSR
Ga0209488_1099199923300027903Vadose Zone SoilMETPYFPPLRSRLAALGRRTAQTIRQATLGQLQEH
Ga0302144_1017251933300028560BogMVMVTPFFPGLRSRLAALGRRTAHTLRQTTLVQLQQHLRDLLPAPLLS
Ga0302156_1024410533300028748BogMVMVTPFFPGLRSRLAALGRRTAHTLRQTTLVQLQQHLRDLLPAP
Ga0302266_1033844113300028779BogMHTPFFPAFRSRLAALGRHTKPLRQATLAQLQEHLRDFLPAALLAS
Ga0307504_1041023413300028792SoilMLITPYFPSLRSRLAALGRRTAQALRQTTLNQLQEHLRDLLPVPLLSA
Ga0302197_1020020913300028873BogMKTPYFPCWRSRLAPLGRRTTQNLRQTTLAQFQQHLRDFLPAPL
Ga0311361_1000256013300029911BogMVLVTPFFPLFRARLAALGRRTAHTLRQTTLVQLQQHLRDLLPAPLLSAEDEGP
Ga0311361_1009987753300029911BogMVMVTPFFPGLRSRLAALGRRTAHTLRQTTLVQLQQHLRDLLPAPLLSAEDEGP
Ga0311361_1121977323300029911BogMITPCFPAFRPRLAALGRRTVHSLRQATLAQLQDQLR
Ga0311358_1025224433300029915BogMNTPFFPAFRPRLAALGRRTEPLRQATLAQLQEHFRACLPPG
Ga0311358_1041271233300029915BogMVLVTPFFPLFRARLAALGRRTAHTLRQTTLVQLQQHLRDLLPAPLL
Ga0311363_1077286033300029922FenMITPCFPAFRPRLAALGRRTVHSLRQATLAQLQDQLRDFLPAPLLSSEDE
Ga0311343_1106384513300029953BogMNTPYFPAFRPRLAALGRHTVATVRQTALAQLQQHLRDFLPAPLLSAEDEGL
Ga0302150_1039134813300029956BogMNTPFFPAFRPRLAALGRRTEPLRQATLAQLQEHFRACL
Ga0311336_1088019223300029990FenMHTPFFPAFRSRLAGLGRRTTQTFRQTTLAQLQQQLRDCLPLS
Ga0311336_1170095513300029990FenMNTPYFPPFRSRLAALGRRTVQPVRQTTLAQLQLHLRD
Ga0302276_1021859823300029992BogMVLVTPFFPLFRARLAALGRRTAHTLRQTTLVQLQQ
Ga0302186_1029882623300030004BogMKTPYFPCWRSRLAPLGRRTTQNLRQTTLAQFQQHLRDFLPAPLLSSEEDGPNSRD
Ga0311349_1169261913300030294FenMHTPYFPCFRSRLAALGRRTAKTIRQATLDQLQQHLRNLLP
Ga0311349_1184140023300030294FenMHTPFFPAFRSRLAGLGRRTTQTFRQTTLAQLQQQLRDCLPLSLLS
Ga0311360_1124994413300030339BogMKTPYFPCWRSRLAPLGRRTTQNLRQTTLAQFQQHLRDFLPAPLLSSEEDGP
Ga0302046_1109040113300030620SoilMNTPFFPALRSRLAALGRRTVSTLRQATLSQLQEQLRGL
Ga0311335_1123189523300030838FenMHTPYFPAFRSRLAALGRRTAGTLRQATLEQLQQHLR
Ga0302323_10079960733300031232FenMHTPYFPAFRSRLAALGRRTAGTLRQATLEQLQQHLRDLLPAPLL
Ga0302318_1004255743300031258BogMVLVTPFFPLFRARLAALGRRTAHTLRQTTLVQLQQHL
Ga0302326_1299437813300031525PalsaMKTPFFPAFRARLAALGRRTARSLRQATLAQFQEQLRDCLPIPLLSGE
Ga0247727_1031661033300031576BiofilmMNTPFFPAFRSRLAAVGRRTARTLRQATLGQLQEQIRDL
Ga0310686_11082778423300031708SoilMNTPYFPPFRSRLAPLGRRSVQPVRQATLAQLQQHLRDFL
Ga0310686_11830311633300031708SoilMETPYFPDWRSRLAALGRRCVPSVRQATLAQLQEHLRDFLPAPLLSAQDDGPNSRD
Ga0315288_1106271613300031772SedimentMHPPYFPALRSRLAALGRRTAQTVRQATLAQLQEHLRDFLPAPLLSAE
Ga0302319_10007277203300031788BogMVLVTPFFPLFRARLAALGRRTAHTLRQTTLVQLQQHLRDLLPAPL
Ga0307473_1123769423300031820Hardwood Forest SoilMLTTPYFPTLRSGLAALGRRTAQALRQTTLNQLQEHLRDLLPVPLLSAEDE
Ga0315290_1137978423300031834SedimentMHTPYFPAFRSRLAALGRRTAHLLRQATLAQIEEHLRDFLPAPLL
Ga0315297_1139029013300031873SedimentMLTPYFPALRSRLAALGRRTDQTVRQTTLTQLQQHLHDLLPAPLLAS
Ga0306919_1017015833300031879SoilMSTPFFPAFRCRLAALGRRTAHLLRQATLAQLQQQVGDYLPAGLLASEEEGPN
Ga0318520_1091977423300031897SoilMPTPFFPAFRCRLAALGRRTAHLLRQATLAQLQQQVGDYLPAGLLAS
Ga0302322_10147917033300031902FenMNTPYFPSFRSRLAALGRRTVQRVRQTTLAQLQQHLRDFLPPGLLSAEE
Ga0315278_1204131913300031997SedimentMHTPFFPAWRSRLAALGRRTARAVRPAILAQLQEH
Ga0318545_1035519823300032042SoilMSTPFFPAFRCRLAALGRRTAHLLRQATLAQLQQQVGDYLPAGLLASEEQG
Ga0306924_1144611413300032076SoilMSTPFFPAFRCRLAALGRRTAHLLRQATLAQLQQQVGDYLPAG
Ga0315277_1140251013300032118SedimentMHTPYFPAFRSRLAALGRRTAHLLRQATLAQLEEHLRDFLP
Ga0315292_1097366033300032143SedimentMHTPFFPAWRSRLAALGRRTARAVRETTLAQLQDYLRDFLP
Ga0315281_1228101723300032163SedimentMLTPYFPALRARLAARGRRTAQTVRQTTLAQLQEHLRDLLPAPLLA
Ga0315287_1211005923300032397SedimentMHTPYFPAFRSRLAALGRRTAHLLRQATLAQIEEHLRDF
Ga0315275_1035675313300032401SedimentMNTPCFPAFRCRLAALGHRTLHTVRQTTLTQLQQHLSDLLPAPLLCAEEDG
Ga0315275_1250704013300032401SedimentMHTPYFPALRSRLAALGRRTAQTVRQATLGQLQEHCRDLIPELLT
Ga0315273_1125297033300032516SedimentMNTPYFPAFRCRLAALGRHTRHAVRQTTLAQLQQHLSDLLPAPLLCAAEDGPNS
Ga0316622_10152482513300033416SoilMHTPYFPSFRPHLAALGRRTTQRLRLTTLAQLQEHLSDFLPPPL
Ga0316620_1178745613300033480SoilMHTPFFPAWRSRLAALGRRTARAVRQATLAQLQEHLRDFLPAPLLSAEDEGPNSRE
Ga0316629_1036121723300033483SoilRRRYIYRPMHTPFLPAFRSRLAALGRRTARSLRQATLGPLQDQIRDLLPAPLLSTEEDGP
Ga0316624_1207667923300033486SoilMHTHFFPAFRSRLAALGRRTAQAIRQATLSQLQEHLRNLLPAPLLSATEEG
Ga0316621_1052239413300033488SoilMPETPFFPAFRARLAALGRRTATTIRQATLAQLQEHLREFLPAQVLAAADEGPHS
Ga0334810_133382_483_5963300033890SoilMKTPYFPCWRSRLAPLGRRTAPVRQTTLAQLQKHLRDF
Ga0370502_0218475_479_6073300034156Untreated Peat SoilMHTPLFPAFRSRLAALGRRTAHTLRQATLAQLQEHLRNLLPAP
Ga0370506_083360_1_1113300034157Untreated Peat SoilMNTPFFPSFRPRLAALGRRTLQRLRQTTLAQLQEQIR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.